<!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

Protease Inhibitors

Subtype D
Gene PR
Mutation E35D
Rx PI-naive
IncludeMixtures No
References 173
Patients 485
Isolates 495
 
Show mutation frequency as:
Exclude mutations:

Sequences matching input query are shown below. Original reference, patient identifier, isolate name, partial treatment histories and accession number are indicated. Complete treatment histories, when available, can be accessed by clicking the isolate name. Sequences may additionally be downloaded in the fasta format, or viewed as individual or composite alignments using the options above. If the user wishes to view individual alignments of isolates for which there are multiple clones, the user can choose to view either an alignment of consensus sequences derived from the clones or an alignment of each clone as well as a consensus sequence.

Author (yr) Patient Isolate Acc# PIs WksPIMajorDRMs PIMinorDRMs OtherMutSubtype
Cornelissen (1997)92UG00192UG001AF009395None   E35D, M36I, R41K, L63P, H69Y, V77ID
Gao (1998)84ZR08584ZR085U88822None   L10V, E35D, M36I, R41K, Q61HD
Pieniazek (1998)LE-4LE4AF025740None   L10I, E35D, M36I, R41K, L63V, H69K, L89M, T91PD
Becker-Pergola (2000)225.745BPG225.745AF176038None   E35D, M36I, R41K, L63T, H69K, L89MD
Holguin (2000)AHHC17HolgHC17AF188349None   L10I, E35D, M36I, R41K, L63A, C67D, H69K, L89MD
Vergne (2000)LVMP571LVMP571AJ286967None   T12S, K14R, I15V, L19I, E35D, M36I, R41K, I62VD
 LVMP634LVMP634AJ286968None   L10V, I15V, L19V, E35D, M36I, R41K, R57K, I62V, L63S, H69Q, K70Q, V77ID
 LVMP976LVMP976AJ286969None  Q58EI15V, G16E, E35D, M36I, N37E, P39S, R41K, D60E, L63PD
 LVMP1060LVMP1060AJ286970None   T12S, I15V, E35D, M36I, R41K, I62V, I64VD
Eshleman (2001)SE830SE830AF388163None   E35D, M36I, R41K, K45R, I62IV, L63P, I64L, H69Y, V77ID
 SE578SE578AF388095None   I13V, E35D, M36I, R41K, I62V, I64V, E65DD
 SE474SE474AF388085None   E35D, M36I, R41K, L63C, I64V, I72IVD
Yahi (2001)NY_M40M40AY010404None   E35D, M36I, R41K, R57RK, L63P, I64V, I93LD
Cuevas (2002)CU94CU94AF425475None   K20R, E35D, M36I, R41K, K43R, L63P, H69QD
 CU73CU73AF425454None   K14R, L19I, E35D, M36I, N37D, R41K, K43R, Q61D, L63P, H69Q, I93LD
 CU65CU65AF425446None   E35D, M36I, N37D, R41K, K43R, L63P, I64L, H69Q, K70R, A71T, I72VD
 CU64CU64AF425445None   E35D, M36I, N37D, R41K, K43R, D60E, Q61E, L63P, H69QD
 CU61CU61AF425442None  T74PK20R, E35D, M36I, N37D, R41K, K43R, D60E, Q61E, L63P, H69QD
 CU60CU60AF425441None   I13V, K14R, G16E, K20M, E35D, M36I, R41K, K43R, L63P, H69Q, L89MD
 CU31CU31AF425412None   E35D, M36I, R41K, K43R, L63P, H69QD
 CU29CU29AF425410None   E35D, M36I, R41K, K43R, D60E, L63P, H69QD
 CU23CU23AF425404None   L5Q, I15V, E35D, M36I, N37D, R41K, K43R, D60E, L63P, H69QD
 CU8CU8AF425389None   K20R, E35D, M36I, N37D, R41K, K43R, L63P, H69Q, V77ID
 CU7CU7AF425388None   E35D, M36I, R41K, K43R, L63P, H69QD
Eshleman (2002)138430v138430vAF410231None   E35D, M36I, R41K, R57RK, L63P, H69K, K70R, L89MD
Fonjungo (2002)CM11CM11AF406731None  L33IE35D, M36I, R41K, L63P, I64M, H69Y, I72T, I93LD
 CM238CM238AF406728None   I15V, L19Q, E35D, M36I, L63P, H69Q, I93LD
 CM234CM234AF406726None   I15V, K20R, E35D, M36I, N37D, R41K, I93LD
 CM231CM231AF406725None   I15V, E35D, M36I, R41K, R57K, I93LD
 CM230CM230AF406724None   I15V, E35D, M36I, R41K, R57K, I64V, I93LD
 CM221CM221AF406722None   I15V, E35D, M36I, R41K, L63P, I93LD
 CM175CM175AF406714None   T12S, I15V, L19I, E35D, M36I, R41K, I62V, I93LD
 CM145CM145AF406712None   L10V, I15V, E35D, M36I, R41K, L63P, H69Q, I93LD
 CM132CM132AF406710None   I15V, E35D, M36I, N37D, R41K, I93LD
Gibb (2002)DMG9090_w-6 None  L10LFI13V, I15IV, E35D, M36I, R41K, I64V, E65DD
Hierholzer (2002)SU480SU480AY102483None   I13V, I15V, E35D, N37D, R41K, D60ED
Koulinska (2002)TZBFL0086TZBFL0086AF442566None   I13V, I15V, E35D, M36I, R41KD
Pandrea (2002)IP_97CIRMF2697CIRMF26AY140613None  K43TI15V, E35D, M36I, N37K, R41K, R57K, I62V, H69QD
 IP_97CIRMF2797CIRMF27AY140614None  L33IE35D, M36I, R41KD
 IP_97CIRMF2497CIRMF24AY140644None   I13V, E35D, M36I, R41K, L63P, H69KD
Papathanasopoulos (2002)99ZACM499ZACM4AF411964None   I13V, K20I, E35D, M36I, N37S, R41K, I64M, K70R, L89MD
Vergne (2002)LV19LV19AJ313419None  L33IQ18L, L19I, E35D, M36I, P39S, R41K, Q61H, L63P, H69Y, I72VD
 LV02BLV02BAJ313404None   I15V, E35D, M36I, R41K, R57K, K70RD
Brindeiro (2003)BRP2133BRP2133AY213427None   E35D, M36I, R41K, R57K, Q61N, V77ID
Njouom (2003)13pro13proAY204324None   I15V, E35D, M36I, R41K, I62V, L63P, H69QD
Soares (2003)BRBS530BRBS530AF527186None   G16GE, K20R, E35D, M36I, R41K, I62V, H69HY, K70KR, I72E, L89M, C95SD
 BRP2087BRP2087AF527301None   L10I, E35D, M36I, R41K, R57K, Q61N, V77ID
Vergne (2003)VL01SN55HPD01SN55AJ583749None   G16E, E35D, M36I, R41K, Y59H, Q61ND
Vidal (2003)99TCDMN01199TCDMN011AJ488926None   I15V, L19Q, E35D, M36I, R41K, D60E, L63P, I64V, K70T, I72VD
 99TCDMN01299TCDMN012AJ488927None   E35D, M36I, N37D, R41K, D60E, I62V, I64VD
 HIM519488HIM519488AJ519488None   I15V, L19Q, E35D, M36I, R41K, D60E, L63P, I64V, K70T, I72VD
 HIM519489HIM519489AJ519489None   E35D, M36I, N37D, R41K, D60E, I62V, I64VD
Eshleman (2004)SE490SE490pAY435392None   I13V, I15V, E35D, N37ND, R41K, R57K, I64V, E65ED, I72VD
  SE490_7dAY428690None   E35D, M36MI, N37ND, R41K, R57K, I64V, E65D, I72VD
Eshleman (2004)ESH_Pat11ESH683AY435328None   I13V, E35D, R41K, D60E, I64V, H69HYD
 ESH_Pat72ESH708AY435341None   I13V, E35D, N37D, R41K, R57RK, D60E, L63P, I64V, K70KR, I72LD
 ESH_Pat124ESH875AY435382None   I15V, E35D, M36I, R41K, I64V, K70KRD
 ESH_Pat126ESH1AY435220None   I13V, G16E, E35D, R41K, L63Q, I64V, K70R, V77ID
Eshleman (2004) SE1_7dAY428667None   I13V, G16E, E35D, R41K, L63Q, I64V, K70R, V77ID
Eshleman (2004)ESH_Pat147ESH662AY435329None   I13V, E35D, M36IV, R41K, K45R, L63P, H69K, L89IMD
Eshleman (2004)ABB21ABB21AY444272None   E35D, M36I, N37ND, R41RK, L63LPD
 BrRJ127BrRJ127AY444303None   L10V, I15V, E35D, M36I, R41KD
 ABB208ABB208AY444271None   E35D, M36I, R41K, I62V, L63P, H69QD
Kijak (2004)0009BBY01CM.0009AY371155None   I15V, E35D, M36I, R41K, I62V, L63P, H69QD
 0175BA01CM.0175AY371156None   I15V, E35D, M36I, R41K, L63P, H69QD
 4412HAL01CM.4412AY371157None   E35D, M36I, R41K, L63P, H69QD
 4008HAN01CM.4008AY371168None   E35D, M36I, R41K, D60E, L63P, K70TD
 0908MO01CM.0908AY371170None   I13V, E35D, M36I, L63P, H69QD
Konings (2004)KF_Pat100CM3147AY359683None   I15V, E35D, M36I, R41K, L63S, I64V, I72V, V77I, N98ID
 KF_Pat300CM4869AY359685None   L10V, E35D, R41K, L63PD
 KF_Pat500CM1911AY359687None   I15V, E35D, M36I, R41K, L63QD
 KF_Pat600CM1457AY359688None   L10V, I15V, E35D, M36I, R41K, L63P, H69Q, I93LD
 KF_Pat700CM1705AY359689None   T12S, E35D, M36I, R41K, D60E, I62V, L63P, H69QD
 KF_Pat800CM1545AY359690None   I15V, G16E, E35D, M36I, R41K, I62VD
Machado (2004)n21n21AY569857None   I15V, E35D, M36I, R41K, I64V, N98KD
Snoeck (2004)BE28BE28AY900735None   E35D, M36I, R41K, R57K, Q61H, L63PD
 BE62BE62AY900760None   I15V, E35D, M36I, R41K, L63X, H69KD
Yang (2004)00KE55700KE557AY492774None   K14R, G16E, E35D, R41KD
 99KE58899KE588AY492789None  L33II13V, L19I, E35D, N37S, R41K, L63Q, I64V, E65D, H69YD
Casado (2005)CU7CU7AY894994None   E35D, M36I, R41K, K43R, L63P, H69QD
 Cu64Cu64AY894995None   E35D, M36I, N37D, R41K, K43R, D60E, Q61E, L63P, H69QD
Ciccozzi (2005)MC_AY611671B66AY611671None   Q7D, I15V, E35D, M36I, R41K, R57K, L63P, H69QD
K'Aluoch (2005)OK_TC011003TC011003DQ079843None   I13V, E35D, M36I, N37D, I64VD
Non-B Workgroup (2005)UK1972UK1972AY900826None   E35D, M36I, R41K, L63Q, I64V, E65DD
 TK5003TK5003 None   I13V, E35D, M36I, R41K, I64V, K70RD
Saad (2005)SM_02YE51602YE516AY795907None   K14N, L19Q, E35D, M36I, N37D, R41K, D60E, I62V, I64VD
Lama (2006)Pt37593759 None   I13V, E35D, M36I, R41K, I62V, L63S, I64M, L89MD
Marechal (2006)JF_122JF_122DQ443704None   I13V, E35D, M36I, R41K, D60E, Q61N, L63T, E65D, H69K, V77I, L89MD
Rousseau (2006)Pt6303PS119MB1DQ351238None   L10I, E35D, M36I, R41K, L63Q, H69K, L89MD
Saad (2006)MDS_01UAKV17601UAKV176DQ055205None   T12P, I13V, E35D, R41K, L63P, I64VD
 MDS_02UAKV18502UAKV185DQ055311None   T12P, I13V, E35D, R41K, L63P, I64VD
Vergne (2006)LV_02CM-CK1_1802CM-18AM181793None  Q58EL10V, E35D, M36IL, N37E, R41K, R57K, D60T, Q61D, L63P, H69QD
 LV_02CM-CK1_202CM-2AM181792None   E35D, M36I, R41K, R57RK, D60E, L63P, H69CD
Vessiere (2006)AV_M10046NAV_M10046NDQ297232None   E35D, M36I, N37D, R41KD
 AV_M3683NAV_M3683NDQ297260None   I15V, E35D, M36I, R41KD
 AV_M9416NAV_M9416NDQ297220None   T12S, I15V, L19I, E35D, M36I, N37D, R41KD
Vidal (2006)NV_KIST10302.KIST103AM041026None   E35D, M36I, R41K, R57K, Q61N, H69Q, I93LD
 NV_KTB18302.KTB183AM040990None   T12D, L19K, K20R, L23P, D29H, E35D, M36I, R41K, L63A, L89MD
 NV_LBTB02802.LBTB028AM041013None   T12S, I15V, K20R, E35D, M36I, N37D, R41K, L63P, H69K, K70R, I93LD
 NV_MBFE25202.MBFE252AM041024None   E35D, M36I, R41K, R57K, Q61H, I62V, L63P, H69N, I93LD
Vidal (2006)KTB1397.KTB13AM000054None   L10I, I13V, E35D, M36I, R41K, H69K, L89MD
Baker (2007)P0043P0043-160205EF186135None   E35D, M36I, R41K, I64V, I72VD
Church (2007)001-106667R001EF611990None   I13V, G16E, E35D, R41K, L63Q, I64V, K70R, V77ID
 474-125849j474EF612038None   E35D, M36I, R41K, L63C, I64V, I72IVD
 578-131089x578EF612071None   I13V, E35D, M36I, R41K, I62V, I64V, E65DD
 662-135975N662EF612099None   I13V, E35D, M36IV, R41K, K45R, L63P, H69K, L89IMD
 683-134300Q683EF612106None   I13V, E35D, R41K, D60E, I64V, H69HYD
 708-136157U708EF612118None   I13V, E35D, N37D, R41K, R57RK, D60E, L63P, I64V, K70KR, I72LD
 830-145979q830EF612162None   P1PS, E35D, M36MI, R41K, K45KR, I62IV, L63P, I64L, H69HY, V77ID
 875-147807H875EF612177None   I15V, E35D, M36I, R41K, I64V, K70KRD
Dilernia (2007)F199F199EF120169None   K14R, G16E, E35D, M36I, R41K, K45R, I72VD
Eyer-Silva (2007)BRSQ5404BRSQ54EF042657None   T12A, I15V, E35D, M36I, R41K, L63T, I72VD
Galluzzo (2007)23290RW_23290JQ220045None   I13V, E35D, M36I, R41K, I62V, L63S, H69K, L89MD
 23610RW_23610JQ220051None   I13V, E35D, M36I, R41K, H69K, L89MD
 M22490UG_M22490JQ220069None   I13V, E35D, M36I, R41K, L63Q, I64V, K70RD
 M22900UG_M22900JQ220085None   I13V, E35D, M36I, R41K, L63P, I64L, F99FLD
Gonsalez (2007)94HIV_94GU288749None   L10I, E35D, M36I, I62V, L63S, A71T, I72M, V77I, I93LD
Holguin (2007)614034614034EF583265None  L10LFT12P, I13IV, K14R, L19LP, K20KM, E35D, M36MI, R41K, K43KR, L63P, H69HQ, K70KE, A71AT, L89LM, I93ILD
Sanchez Onoro (2007) 614034 None  L10LFT12P, I13IV, K14R, L19LP, K20KM, E35D, M36MI, R41K, K43KR, L63P, H69HQ, K70KE, A71AT, L89LM, I93ILD
Varella (2007)29ini29ini None   T12E, K14R, E35D, M36I, R41K, D60E, Q61E, L63PD
von Wyl (2007)12610517835EF449780None   L10V, I15IV, E35D, M36I, R41K, L63PS, I72AVD
 801797997EF449958None   T12A, I13V, L19I, E35D, M36I, R41K, Q61N, L63S, I72TD
Caron (2008)1652Gab1652PEU556467None   L10V, I15V, G16E, E35D, M36I, R41K, H69K, L89MD
Chang (2008)TW2195aTW2195a None  Q58EL5F, Q7H, L10V, I15V, E35D, M36I, R41K, L63P, K70T, I93LD
Church (2008)318990H318990HEU380720None   E35D, M36I, R41K, H69K, L89MD
 367927-J367927-JEU380735None   I13V, I15V, G17E, E35D, M36I, R41K, K45R, I62V, L63P, I64V, H69CD
 391100H391100HEU380747None   I13V, K20M, E35D, M36I, R41K, I64V, H69QD
 458569M458569MEU380763None   T12S, K14R, L19Q, K20R, E35D, M36I, N37D, R41K, I64V, H69YD
Derache (2008)SGO-96SGO-96EU330836None   K14R, I15V, K20R, E35D, M36I, R41K, D60E, Q61E, I62V, C67E, H69R, L89M, I93LD
Holguin (2008)SP4-341752SP4-341752EU255489None   I15V, E35D, M36I, R41K, R57K, L63PD
Ibe (2008)8888AB356098None   E35D, N37Y, R41K, R57K, L63H, I64VD
Jacobs (2008)1078C1078CEF602171None   T12S, I15IV, L19LI, E35D, M36MI, R41K, L63P, L89LM, I93LD
Lloyd (2008)CR15003HN_CR150EU312709None   I13IV, K14KR, E35D, R41K, L63P, K70R, V77LD
Matthews (2008)PS119PS119FJ199691None   L10I, E35D, M36I, R41K, L63Q, H69K, L89MD
Ndembi (2008)CMYD-304CMYD-3DQ990378None   E35D, M36I, R41K, L63R, K70E, R87KD
 CMYD-2404CMYD-24DQ990397None   T12S, I15X, L19I, E35D, M36I, R41K, I64VD
 CMYD-5604CMYD-56DQ990421None   L10V, I13V, G17D, K20R, E35D, M36I, R41K, L63T, H69QD
 CMYD-5704CMYD-57DQ990422None   I15V, L19I, E35D, M36I, N37E, R41KD
Ndembi (2008)IAEM030IAEM030EU306762None   I13V, E35D, M36I, N37T, R41K, L63PD
Nyombi (2008)TBK029TBK029EU251732None   I13IV, K20KR, E35D, N37S, R41K, L63P, V75ID
 TBK074TBK074EU251761None   T12A, I13V, K14R, E35D, M36I, R41K, R57K, D60E, I62V, L63P, I64V, H69Y, I72VD
 TBK093TBK093EU251775None   T12S, I13V, I15V, L19I, E35D, R41K, L63T, H69KQ, A71T, V82I, I93LD
 TMS003TMS003EU251784None   E35D, M36MI, R41K, I64V, H69Y, I72TD
 TMS008TMS008EU251789None   E35D, M36I, R41K, I64V, H69Y, I72TD
 TMS015TMS015EU251794None   I13V, I15V, E35D, M36I, R41K, I64VD
 TMS112TMS112EU251812None   I13V, I15V, E35D, M36I, R41K, I64VD
 TMS148TMS148EU251837None   I13V, G16E, E35D, M36I, R41K, Q61H, L63H, H69K, I72V, T74S, L89M, I93LD
 TMS220TMS220EU251853None   L10V, I13V, E35D, P39Q, R41K, D60E, L63P, I64V, H69K, A71T, V77ID
 TMS323TMS323EU251869None   E35D, N37S, R41K, L63PD
Aghokeng (2009)CYV020CYV020GU191590None   T12S, I15V, L19V, E35D, M36I, R41KD
 CYM041CYM041GU191591None   L10LI, T12TP, K14KR, E35D, M36I, R41K, L63P, H69QD
 CYM078CYM078GU191592None   L10V, G16E, E35D, N37S, R41K, R57K, L63CD
 CYN1003CYN1003GU191593None   T12S, I15V, G16E, L19I, E35D, M36I, P39S, R41K, Q61D, L63HD
 DG0405DG0405GU191645None   Q7E, E35D, M36I, N37E, R41K, K43KQ, R57K, L63P, K70RD
 AV_0274AV_0274GU191655None   I15V, G16E, E35D, M36I, R41K, R57K, Q61QH, L63A, E65EDD
 HG_0285HG_0285GU191663None   V11VA, T12TAP, I15V, L19V, E35D, M36I, N37E, R41K, I62V, I72VD
 HU_0172HU_0172GU191678None   I15V, E35D, M36I, N37E, R41K, R57RK, D60E, I64V, C67SD
Ayouba (2009)28802880HALDPRGQ351972None   G16E, E35D, M36I, R41K, Q61HD
 29172917HALDPRGQ351978None   I13V, E35D, R41K, Q61H, I64V, K70RD
Bartolo (2009)HJM11501AOHJM115EU068253None   T12N, K14R, I15V, E35D, M36I, R41K, K45R, L63T, H69K, L89M, I93LD
Brown (2009)CAS_141_1_8110CAS_141_1_8110FJ030701None   I15V, E35D, M36I, R41K, I62V, L63P, H69QD
Dumans (2009)451_05451_05FJ405054None   I15V, E35D, M36L, R41K, K45R, L63P, K70R, I93LD
Eshleman (2009)E13257W207-156981FJ389087None   E35D, M36I, R41K, H69K, K70R, L89MD
 A13889W208-102648FJ389139None   I13V, E35D, N37D, R41K, I64V, H69YD
Hawkins (2009)Q234ZZQ234FJ931225None   I15V, K20R, E35D, M36I, R41K, R57RKD
Huang (2009)Blm_x0747Blm_x0747KT737140None   I13V, E35D, M36I, N37D, R41K, Q58H, L63E, I64V, E65DD
Kousiappa (2009)CY007CY007EU673377None   T12S, I15V, E35D, M36I, R41K, K43KQ, L89MD
Koyalta (2009)71TCHAD-71FJ688202None   K20R, E35D, M36I, R41K, L63AD
 74TCHAD-74FJ688204None  Q58ET4S, K14R, I15V, K20R, E35D, M36I, R41K, L89MD
 85TCHAD-85FJ688209None  Q58ET4S, K14R, I15V, K20R, E35D, M36I, R41K, L89MD
Machado (2009)A049BRPA049GQ200748None   E35D, M36I, R41K, L63P, A71V, V77LD
Mintsa-Ndong (2009)MKK90MKK90AM903437None   T12K, K14R, I15V, E35D, M36I, R41KD
Steegen (2009)BV245BV245-1EU872132None   I13V, K20R, E35D, M36I, N37D, K45R, R57K, L63T, H69K, L89MD
Vercauteren (2009)pt2185108155411GQ398839None   Q7R, L10LP, T12A, I13V, I15V, K20I, E35D, M36I, R41K, L63P, I64L, H69HDD
 pt18811dcpCYriD6GQ399143None   I13V, I15V, E35D, N37S, R41K, I64V, H69Y, V77ID
 pt17083124576130GQ399316None   T12L, I13V, G16E, E35D, M36I, R41K, K45R, D60E, I62V, L63AS, I64V, I72IVD
 pt15134198741005GQ399511None   E35D, M36I, R41K, L63P, K70R, I72VD
 pt5139825473025GQ400511None   I13V, I15IV, G17GE, E35D, M36I, N37D, R41K, D60E, I62IV, L63LP, I64IV, K70KR, I72IMD
Yebra (2009)SP26-346921SP26-346921EU342817None   I15V, E35D, M36I, R41K, R57KD
 SP75-392005SP75-392005EU362927None   I13V, I15V, E35D, M36I, R41KD
Castelbranco (2010)090014A090014AHM357731None   E35D, M36I, R41K, D60E, I62V, L63P, K70R, I93LD
 090044A090044AHM357751None   T4S, L10V, T12TI, I13V, G16E, K20R, E35D, M36I, R41K, R57K, L63T, E65D, I72T, L89MD
Diop-Ndiaye (2010)160HALD160HALDFN599689None   T12S, I15V, E35D, M36I, R41K, Q61HN, I62V, L63P, H69YD
Djoko (2010)655CD2193FR666655None   E35D, M36I, N37ND, R41K, Q61QH, I62IV, I64V, I72TD
 667CD3864FR666667None   I15V, E35D, M36I, R41K, K43R, R57K, Q61N, I62V, L63HQ, E65ED, H69QD
 695CD0002FR666695None   I15V, L19V, E35D, M36I, R41K, D60E, Q61E, L63P, C67E, H69K, K70R, L89ID
Djoko (2010)GQ26708GQ267FN557340None   I13V, L19I, E35D, M36I, N37D, D60E, I62V, L63P, L89MD
Ferreira (2010)p013Dip013GQ862323None   L10V, I15V, E35D, M36I, R41K, L63T, I64V, E65DD
Gonzalez (2010)MO_3MO_3GQ433873None   G16E, E35D, M36I, P39S, R41K, K45R, D60E, Q61E, L63P, H69K, L89M, I93LD
Hattori (2010)C08-20672875C08-20672875AB864181None   E35D, L63P, G68E, A71V, V77I, I93LD
 C08-20922862C08-20922862AB864178None   E35D, L63P, G68E, A71V, V77I, I93LD
Ndembi (2010)13306D_P113306GQ409553None   L10V, I13V, I15V, K20I, E35D, M36I, R41K, L63P, I64M, N83H, L89MD
Soares (2010)CM04_050CM04_050GU366145None   L19I, E35D, M36I, R41K, R57K, I62V, L63S, A71T, I72V, V77ID
 CM02_010CM02_010GU366151None   E35D, M36I, R41K, L63P, I64V, K70TD
Towler (2010)317051-R317051-RHM037835None   E35D, R41K, L63P, H69HY, I85IMD
 378415-M378415-MHM037864None   E35D, R41K, L63P, I64L, A71T, V77ID
Aghokeng (2011)HJ1815HJ1815JN639521None   L10LI, T12TP, K14KR, E35D, M36I, R41K, L63P, H69QD
 HJ1611HJ1611JN639523None   I15V, L19I, E35D, M36I, N37E, R41K, I62IV, H69H*QYD
 SK3032-PISK3032-PIJN639528None   I15V, E35D, M36I, R41K, I62V, L63I, I64VD
 SK1002-PISK1002-PIHQ864352None   K14KR, I15V, E35D, M36I, N37ND, R41K, R57RK, I62V, L63A, E65EDD
 SK3012-PISK3012-PIHQ864353None   I15V, L19Q, E35D, M36I, R41K, Q61QE, L63P, I93LD
 SK4064-PISK4064-PIHQ864354None   L10V, I15V, E35D, M36I, R41K, I62V, C67D, V82VID
 SK9022-PISK9022-PIHQ864356None   L10IM, Q18QH, E35D, M36IL, R41K, R57RK, I62V, L63PT, H69QD
 SK1025-PISK1025-PIHQ864357None   L19I, E35D, M36I, R41K, I62V, L63S, I72IV, V77VID
 SK3005-PISK3005-PIHQ864378None   E35D, M36I, R41K, L63P, H69QD
Carvalho (2011)O01-43O01-43GU214066None   I15V, E35D, M36V, R41K, L63TD
Charpentier (2011)CR-47CR-47FJ688253None   L10LI, K14R, I15V, G17D, E35D, M36I, R41K, R57K, D60E, Q61N, I62V, L63LP, I93LD
El Annaz (2011)62646264HQ393275None   T12P, E35D, M36I, R41K, L63P, I64V, C67WD
 1410714107HQ393314None  L33II13V, I15IL, E35D, M36I, N37I, R41K, R57K, L63A, I64V, E65D, I72IVD
Ferreira (2011)BRMT1221BRMT1221HQ638778None   T12N, I15V, L19I, E35D, M36I, R41K, I62IV, L63PS, K70V, I72VD
Fokam (2011)CIRCB-1519CIRCB-1519JQ796144None   I15V, E35D, M36I, R41K, L63P, H69QD
 CIRCB-9860CIRCB-9860JQ796162None   T12S, I15V, G16E, L19I, E35D, M36MI, P39S, R41K, D60DE, Q61DN, L63HD
Hamers (2011)300117CP076300117HM119694None   E35D, M36I, R41K, L63P, H69K, I93LD
 300252CP076300252HM119804None   I15V, L19I, E35D, M36L, N37ND, R41K, R57K, D60E, Q61QE, L63P, H69K, I93LD
 300405CP076300405HM119832None   T12S, K14R, I15V, L19I, K20R, E35D, M36I, R41K, R57K, H69K, L89MD
 CP076301542CP076301542HQ993585None  I50KE35D, M36T, R41K, D60E, L63P, H69K, V77I, L89MD
 CP076301579CP076301579HQ993618None   L10I, I13V, E35D, M36I, R41K, H69K, L89MD
 CP076301620CP076301620HQ993656None   I13V, G16E, E35D, M36I, R41K, Q61E, I62V, I64V, H69HY, I72R, V77VID
 CP076301689CP076301689HQ993685None   L19X, E35D, M36I, N37S, R41K, I62V, L63S, I64IVD
 CP076301718CP076301718HQ993711None   L5X, L10V, I13V, E35D, M36I, R41K, D60E, Q61E, I62V, L63P, H69K, L89MD
 CP076301750CP076301750HQ993739None   Q18I, L19V, E35D, M36I, R41K, L63T, I64L, H69Y, I72T, L89MD
 CP076301773CP076301773HQ993759None   P9PFLS, E35D, M36I, N37D, R57K, L63S, H69K, L89MD
 CP076304156CP076304156HQ993881None   I13V, E35D, M36I, R41K, I62IV, I64VD
 CP076304396CP076304396HQ993971None   E35D, M36I, N37ND, R41K, L63AD
 CP076303519CP076303519HQ994001None   I15V, E35D, M36I, N37D, R41K, R57K, Q61H, K70RD
 CP076303615CP076303615HQ994076None   T12S, I15V, L19T, E35D, M36I, R41K, L63LP, I64IVD
 CP076301449CP076301449HQ994419None   I13IV, G16GE, K20KR, E35D, M36I, R41K, K70R, L89LMD
 CP076301523CP076301523HQ994468None   L19I, E35D, R41K, D60E, I64VD
 CP076300841CP076300841HQ994957None  L33II13V, K20M, E35D, M36I, R41K, L63Q, I64V, I72VD
 CP076301880CP076301880HQ995009None   K20R, E35D, M36I, R57K, I62V, I64IM, H69K, K70R, L89MD
 CP076301885CP076301885HQ995013None  V11IL10M, I13V, E35D, R41K, L63T, I64VD
 CP076302962CP076302962HQ995049None   L19I, E35D, M36I, R41K, L63PD
 CP076302990CP076302990HQ995062None   I15V, E35D, M36I, R41K, D60E, I62V, I64VD
 CP076300870CP076300870HQ995128None   I13V, E35D, M36I, R41K, L89MD
 CP076302024CP076302024HQ995193None   L10V, I13V, K20R, E35D, M36I, L63P, H69QD
 CP076302051CP076302051HQ995203None   L10V, I13V, G16E, E35D, R41K, R57K, L63R, I64V, E65D, I72MD
 CP076302813CP076302813HQ995213None   I15IV, E35D, M36MI, P39PS, R41K, D60E, I62V, I64VD
 CP076303043CP076303043HQ995227None   E35D, M36I, R41K, R57K, H69KD
 CP076303079CP076303079HQ995257None   I13V, E35D, R41K, I64VD
 CP076303101CP076303101HQ995277None  L10FI15V, Q18QH, L19I, E35D, M36I, R41K, L63LI, I64V, H69QD
 CP076303124CP076303124HQ995298None   E35D, M36I, R41K, L63PD
 CP076300734CP076300734HQ995323None   I13V, G16E, E35D, M36I, R41K, I62V, L63Q, I64VD
 CP076301899CP076301899HQ995378None   I13V, E35D, M36I, R41K, R57RK, D60E, I62V, I64VD
 CP076301900CP076301900HQ995379None   I13V, I15V, E35D, M36I, R41K, H69K, I72IM, L89MD
 CP076301966CP076301966HQ995430None   L10I, I13V, E35D, M36I, R41K, L63T, C67Y, H69K, L89MD
 CP076301970CP076301970HQ995434None   I15V, G16E, E35D, L63A, K70RD
 CP076301974CP076301974HQ995438None   I13V, I15V, E35D, R41K, L63P, I64V, H69Y, I72VD
 CP076302914CP076302914HQ995478None   I13V, I15V, E35D, R41K, L63P, I64V, H69Y, K70R, I72VD
Kasang (2011)3265332653HM572338None   E21K, E35D, M36I, N37D, R41K, Y59F, I64V, E65K, H69Y, R87RKD
 3264832648HM572351None   I13V, G16E, E35D, M36I, R41K, I62V, L63H, I64V, E65DD
 1719617196HM572364None   I13V, G16E, E35D, M36I, R41K, K45KR, L63AV, I64V, E65D, H69HY, K70KR, I72ITD
 3264432644HM572414None   I15V, L19I, E35D, M36I, N37D, R41K, H69K, L89MD
 3265532655HM572419None   E35D, M36I, R41K, L63M, H69K, L89MD
Ndembi (2011)AICPS283AICPS283HQ702652None  L33FI13V, E35D, M36I, R41K, I62V, L63P, I64L, H69K, K70R, L89M, F99LD
 AICPS233AICPS233HQ702655None   E35D, M36I, R41K, Q61H, I64VD
Sanabani (2011)BR2019BR2019JN692448None   E35D, M36I, R41K, R57K, Q61N, I64V, I72VD
Afonso (2012)ANG49ANG49JN937062None   E35D, M36I, R41K, R57K, Q61N, I93LD
 ANG56ANG56JN937069None   E35D, M36I, N37D, R41K, Q61N, L63S, C67W, I72T, G86KD
 ANG32ANG32JN937045None   E35D, M36I, R41K, Q61N, L63S, I64M, H69K, I72TD
da Silveira (2012)BRMS40BRMS40JF342293None   P1T, E35D, M36I, R41K, Q61N, I64VD
De Gascun (2012)IRL32980IRL32980JN622307None   I13V, K14R, I15V, K20I, E35D, M36I, R41K, L63P, H69Q, A71TD
 IRL32981IRL32981JN622308None   I13V, K14R, I15V, K20I, E35D, M36I, R41K, L63P, H69Q, A71TD
Delwart (2012)479-2547-7479-2547-7JN215097None   I15V, E35D, M36I, N37D, R41K, K43R, Q61E, L63P, H69Q, A71T, I72V, I93LD
Hunt (2012)GP09_2391GP09_2391KF736753None  Q58ET12S, L19I, E35D, M36I, R41K, R57K, D60E, Q61E, L63P, H69K, L89M, I93LD
Karlsson (2012)SE_48SE_48JQ698699None   I13V, E35D, N37ND, L63P, I64V, K70RD
 SE_259SE_259JQ698846None   E35D, N37D, R41K, K43R, L63P, A71T, Q92RD
Machado (2012)CUPL0904CUPL0904HQ655337None   K20R, E35D, M36I, N37S, R41K, K43R, Q61N, L63S, H69QD
 CUPL0910CUPL0910HQ655343None   E35D, M36I, R41K, K43R, I62V, L63P, H69Q, I72VD
 CUPL0932CUPL0932HQ655365None   L19I, E35D, M36I, R41K, L63P, H69QD
 CUPL0934CUPL0934HQ655367None   E35D, M36I, R41K, L63P, H69Q, K70Q, I93LD
 CUPL0941CUPL0941HQ655374None   T12P, L19I, K20R, E35D, M36I, R41K, L63P, H69Q, K70E, A71T, I93LD
 CUPL1005CUPL1005HQ655382None   E35D, M36I, R41S, L63P, H69QD
 CUPL1015CUPL1015HQ655392None   L10I, E35D, M36I, R41K, L63P, H69Q, K70Q, I93LD
 CUPL1018CUPL1018HQ655395None   L10I, I13V, G16E, E35D, M36I, R41K, I62V, L63S, I64V, H69Q, V75ID
 CUPL1028CUPL1028HQ655405None   L10I, I13V, K14R, I15V, G16E, E35D, M36I, N37S, R41K, I62R, L63P, H69QD
 CUPL1030CUPL1030HQ655407None   K20R, E35D, M36I, N37S, R41K, L63P, H69HQD
 CUPL1043CUPL1043JN000015None   T12K, I13V, L19I, E35D, R41K, L63P, H69Q, A71TD
 CUPL1048CUPL1048JN000020None   I15V, E35D, M36I, R41K, K43R, L63P, H69Q, V82ID
 CUPL1054CUPL1054JN000026None   L10I, I13V, G16E, E35D, M36I, R41K, G49E, I62V, L63S, H69QD
 CUPL1062CUPL1062JN000034None   L10V, E35D, M36I, R41K, D60E, L63P, H69Q, V77ID
 CUPL1067CUPL1067JN000039None   I13V, E35D, M36I, R41K, D60E, L63P, H69QD
 CUPL1077CUPL1077JN000049None   E35D, N37S, R41K, D60E, Q61E, L63P, H69Q, I93LD
 CUPL1080CUPL1080JN000052None   E35D, M36I, R41K, K43R, I62V, L63P, H69Q, K70Q, A71T, I93LD
 CUPL1090CUPL1090JN000062None   E35D, R41K, K45R, L63P, I64L, H69QD
 CUPL1096CUPL1096JN000068None  Q58ET12E, I15V, L19I, E35D, M36I, N37D, R41K, K43R, R57K, D60E, Q61E, L63P, H69Q, I93LD
 CUPL1126CUPL1126JX194205None   E35D, M36I, R41K, K43R, I62V, L63P, H69QD
 CUPL1138CUPL1138JX194217None   K20R, E35D, M36I, N37D, R41K, R57K, L63T, E65D, H69R, I72MD
 CUPL1142CUPL1142JX194221None   E35D, M36I, R41K, R57K, L63P, I64V, H69Q, K70QD
Nazziwa (2012)10236201023620JX498972None   L10V, I13V, I15V, E35D, M36I, N37S, R41K, K45R, R57K, L63Q, I64VD
 31543023154302JX498998None   T12S, I15V, L19V, E35D, M36I, N37K, R41N, D60E, L63P, V77ID
Ndase (2012)5108875251088752KC900581None   I15V, E35D, M36I, R41K, L63P, H69QD
 5101849251018492KC900684None   I13V, K14KR, I15V, E35D, M36I, R41K, L63C, I64V, I72VD
 5405514254055142KC900745None   T12A, E35D, M36I, R41K, L63P, K70RD
 5300730253007302KC900699None   G16E, E35D, M36I, L63HPQ, H69K, K70Q, L89M, I93LD
 5606130256061302KC900814None   E35D, M36I, N37D, R41K, K45R, L63P, I64V, C67Y, K70RD
 5003239250032392KC900787None   I15V, E35D, M36I, N37D, R41RK, I62IV, L63X, I64V, E65D, I72VD
 5106310051063100KC900531None   I15V, E35D, M36I, R41K, D60DE, L63P, H69QD
Reynolds (2012)E0580E0580-0JN652150None   E35D, N37NS, R41K, R57K, L63LP, I64V, H69Y, I72IVD
  E0580-1JN652183None   E35D, R41K, R57K, L63P, I64V, H69Y, I72VD
 F0703F0703-0JN652155None   L10IV, I13V, K14KR, E35D, M36I, R41K, I64V, H69YD
  F0703-1JN652191None   L10V, I13V, K14KR, E35D, M36I, R41K, I64V, H69HYD
 F0719F0719-0JN652156None  V11VIL10I, I13V, E35D, M36I, R41K, K45KR, R57RK, L63X, I64IMV, L89LM, L97LID
  F0719-1JN652192None  V11IL10I, I13V, E35D, M36I, R41K, L63Q, I64VD
 G0772G0772-0JN652159None   L10I, V11L, T12P, I13V, L19I, E35D, M36I, R41K, L63*PQS, I64V, I72VD
  G0772-1JN652195None   L10I, V11L, T12P, I13V, L19I, E35D, M36I, R41K, L63Q, I64V, I72VD
Serrano (2012)20106934362010693436JQ616878None   L10I, I13V, I15V, K20I, E35D, M36I, R41K, Q61H, K70R, A71T, I72ED
 20106934482010693448JQ616887None   Q18E, E35D, M36I, R41K, Q61N, L63T, E65D, I72TD
 20106934532010693453JQ616908None   L10I, I13V, I15V, K20I, E35D, M36I, R41K, H69L, K70R, A71T, I72ED
Ssemwanga (2012)RCC_TDR_359881RCC_TDR_359881JQ266022None   I13V, I15V, E35D, M36I, R41K, L63T, I64V, E65DD
 RCC_TDR_355927RCC_TDR_355927JQ266028None   E35D, M36I, R41K, L63P, I64LD
 RCC_TDR_359885RCC_TDR_359885JQ266030None   I13V, I15V, E35D, M36I, R41K, L63T, I64V, E65DD
 RCC_TDR_359957RCC_TDR_359957JQ266045None   T12A, L19I, E35D, M36I, R41K, Q61N, L63S, I64V, E65D, V77ID
Ssemwanga (2012)0765HR0765HRJF800190None   I13V, I15V, E35D, M36I, R41K, H69K, L89MD
 1420HR1420HRJF800192None   I13V, I15V, E35D, M36I, R41K, L63Q, I64V, I72V, V77ID
 3981HR3981HRJF800200None   I13V, K20R, E35D, M36I, R41N, I62V, I64V, H69YD
 8651HR8651HRJF800231None   T12S, I15V, E35D, M36I, N37D, R57K, L63T, H69K, V82ID
Youngpairoj (2012)cm182bbcm182bbDQ166435None  Q58EE35D, M36I, R41K, L63P, H69K, V77ID
Aghokeng (2013)HJ3066HJ3066JX982984None   T12S, K14R, I15V, E35D, M36I, R41K, R57K, Q61N, I62V, L63PS, E65D, H69Q, I72IVD
 HJ3116HJ3116JX982985None   E35D, R41K, D60E, L63P, H69QD
 HJ3051HJ3051JX982983None   T12S, E35D, M36I, R41K, I62V, L63P, I64VD
Alencar (2013)MG2-0004MG2-0004JQ237980None   L10V, I15V, E35D, M36I, R41KD
 RJ2-0063RJ2-0063JQ238088None   Q7E, T12P, K14R, E35D, M36I, N37D, R41K, L63P, I64L, A71V, I72V, V77I, I93LD
 MG2-0023MG2-0023JQ238092None   I15V, L19T, E35D, M36I, R41K, L63P, H69Q, V77ID
 RJ2-0095RJ2-0095JQ238222None   E35D, M36I, N37D, R41K, L63P, I64L, A71V, I72E, V77I, I93LD
Antoniadou (2013)GR136GR136KF671844None   L10I, I13V, L19I, E35D, M36I, R41K, K45R, R57K, D60E, L63T, C67Y, H69Q, L89MD
Bila (2013)MZPRA70HIV-1KF927430None   I13V, E35D, M36I, N37S, R41K, R57K, I64VD
 MZQUE300HIV-1KF927433None   E35D, M36I, R41K, L63P, H69K, L89M, I93LD
Billong (2013)MR106MR106KF192113None   I15V, E35D, M36I, P39PS, R41K, I62V, L63T, I64V, V77VID
 MR001MR001KF192112None   I15V, E35D, M36I, R41K, R57K, L63P, H69QD
 MR058MR058KF192254None   E35D, M36I, N37E, R41K, L63PD
 MR091MR091KF192255None   L10I, I15V, Q18K, E35D, M36I, N37DE, R41K, W42WL, R57K, Q61QP, L63P, C67Y, H69Q, K70RD
 MR019MR019KF192114None   I13V, G16E, E35D, M36I, P39S, R41K, I62V, L63H, I64VD
 MR067MR067KF192257None   I15V, K20R, E35D, M36I, R41K, R57KD
 MR051MR051KF192256None   E35D, M36I, R41K, L63P, H69Q, A71ATD
Brooks (2013)CAN2013-151CAN13-151KF727692None   L10LV, T12TS, I15IV, K20R, E35D, M36I, R41K, L63S, H69K, L89M, I93LD
Ferreira (2013)BR09SP348BR09SP348HM534175None   I15V, E35D, M36I, N37D, R41K, Q61HD
Frentz (2013)EHR-06472EHR-06472JX299650None   K14R, I15V, E35D, M36I, R41K, I62V, L63S, H69QD
 EHR-25464EHR-25464JX299982None   I13V, K14R, I15V, K20I, E35D, M36I, R41K, L63P, H69Q, A71TD
 EHR-41871EHR-41871JX300248None   E35D, M36I, N37D, R41K, L63S, H69K, L89MD
 EHR-57646EHR-57646JX300501None   E35D, M36I, R41K, R57K, Q61N, L63C, H69QD
 EHR-75358EHR-75358JX300821None   T12P, K14R, E35D, M36I, R41K, K43R, L63P, H69QD
 EHR-92753EHR-92753JX301085None   I13V, K14R, I15V, K20I, E35D, M36I, R41K, L63P, H69Q, A71TD
Hassan (2013)RS09000908RS09000908HQ441653None   I13IV, E35D, M36I, N37D, R41K, L63P, K70RD
 RS09000982RS09000982HQ441717None   L10V, L19P, E35D, M36I, N37D, R57K, L63T, H69K, L89MD
 RS11000296RS11000296JQ698382None   E35D, M36I, R41K, I62V, L63LQ, I64V, T96TPD
 RS11000311RS11000311JQ698393None   I13V, E35D, M36I, N37D, R41K, H69K, L89MD
 RS11000315RS11000315JQ698394None   I15V, E35D, R41K, L63P, I72IV, V82ID
Inzaule (2013)120120JQ914103None  L23LIRI13V, L19I, E35D, M36I, R41K, R57RK, L63P, I64V, V77ID
Kemal (2013)77477747JQ364525None   I13V, K20R, E35D, M36I, R41K, Q61D, L63T, E65D, H69K, I72T, L89MD
 71017101JQ364514None   L10V, E35D, M36I, R41KD
 82218221JQ364536None   E35D, M36I, R41K, I62V, H69K, L89MD
Kiptoo (2013)KTL133KTL133KC517026None   I13V, K14KR, E35D, M36I, R41K, I64VD
 KTL075KTL075KC517014None   I13V, G16E, E35D, M36I, R41K, R57K, L63S, I64V, E65DD
 KAP001KAP001KC516873None   W6W*, I13V, E35D, M36I, R41K, H69K, L89MD
 KAP008KAP008KC516876None   T12TK, I13V, E35D, M36I, R41K, I64V, E65DD
 KAP049KAP049KC516898None   E35D, R41K, D60EG, I64V, V77I, V82I, T96TPD
Li (2013)hnr129hnr129KC988061None   I15V, E35D, M36I, R41K, L63T, H69K, L89M, I93LD
Nzeyimana (2013)102_1134102_1134HG780791None   T12S, I15V, L19I, E35D, N37K, R41N, L63PD
Pircher (2013)A1011A1011JX110260None   I13V, K20R, E35D, M36I, P39Q, R41K, I62V, L63P, I64IM, H69Y, I72V, L89MD
 B1142B1142JX110328None   E35D, M36I, R41K, Q61N, H69QD
Rusine (2013)713H713HKC841778None   I13V, I15IV, E35D, M36I, R41K, L63AV, H69K, L89MD
 712H712HKC841736None   L10V, T12TS, I13V, I15IV, G17GE, E35D, M36I, R41K, K45KR, L63P, I72V, L89MD
Sigaloff (2013)JCR118_0JCR118_0JX182007None   I13V, E35D, R41K, L63S, I64VD
 JCR099_0JCR099_0JX181999None   L10V, I13V, G16E, E35D, M36I, P39S, R41K, I62V, L63S, I64V, E65DD
Theys (2013)131238131238 None   I13V, L19I, E35D, M36I, R41K, Q61DN, L63S, I72TD
Van Zyl (2013)O11611134KC422903None   E35D, M36I, R41K, L63P, A71ATD
 531411.ZA.EC106KC423716None   I15V, L19V, E35D, M36I, R41K, R57K, L63P, H69K, I93LD
Aghokeng (2014)SN-2-338SN-2-338KC350179None   I13V, E35D, M36I, N37D, R41K, K45R, Q61N, L63P, I72ED
 CM-1-290CM-1-290KC350180None   E35D, R41K, L63P, I64L, H69QD
 SN-1-290SN-1-290KC350362None   E35D, M36I, N37D, R41K, Q61HD
 SN-1-052SN-1-052KC350178None   R8RP, I15V, G16E, E35D, M36I, R41K, V56VI, Q61N, I62V, K70KR, I72TD
Bartolo (2014)09AOHDP26409AOHDP264KF853833None   T12P, L19V, E35D, M36I, R41K, I62V, L63S, C67N, H69KD
 09AOHDP20809AOHDP208KF853799None   E35D, M36I, R41K, I62IV, L63LFPSD
 09AOHDP1509AOHDP15KF853772None   L10I, L19V, E35D, M36I, N37D, R41K, Q61N, I62IV, L63S, E65D, I72T, N83NSD
 09AOHDP23009AOHDP230KF853811None   I13V, K14R, L19V, E35D, M36I, N37D, R41K, H69K, L89MD
 09AOHDP11609AOHDP116KF853760None   L10I, I13V, K20KR, E35D, M36I, N37D, R41K, L63TD
 09AOHDP11909AOHDP119KF853762None   E35D, M36MI, N37D, R41K, K70KRD
Chung (2014)KTF_42_KA261eKTF_42_KA261eKF544272None   I13V, K14KR, E35D, R41K, L63P, I64V, K70RD
 KVE_34_KA453eKVE_34_KA453eKF544262None   K14R, E35D, M36I, R57K, L63T, H69K, V77I, L89MD
Hassan (2014)RS09000774RS09_774KC568478None   I13V, E35D, N37H, R41K, R57K, L63Q, I64V, V77ID
Lee (2014)MBA1067MBA1067KJ906768None   I13IV, L19LI, E35D, M36I, N37ND, R41K, L63EQ, I64V, E65D, V77ID
 MBA1210MBA1210KJ906906None   I13V, E35D, M36I, N37ND, R41K, K45R, D60DE, I62V, L63P, I64IM, H69YD
 MBA1001MBA1001KJ906706None   E35D, M36I, I62IV, L63PD
 AMU019AMU019KJ906640None   T12P, I13V, K14KR, G16E, E35D, M36I, R41K, H69K, L89MD
 MBA1465MBA1465KJ907143None   I15V, E35D, M36I, R41K, R57K, L63C, I64V, E65D, H69HY, K70KRD
 MBA1330MBA1330KJ907016None   L10I, E35D, M36I, R41K, R57RK, L63T, H69KD
 MBA1340MBA1340KJ907026None   T12S, K14KR, I15V, L19Q, K20R, E35D, M36I, R41K, I62V, I64V, E65D, I72TD
 MBA1045MBA1045KJ906746None   I13V, E35D, M36I, R41K, I62V, L63P, I64V, V77ID
 MBA1517MBA1517KJ907191None   L10V, I15V, E35D, M36I, R41K, K43R, R57K, L63P, H69K, L89MD
 AMU094AMU094KJ906704None   I15IV, L19LI, E35D, M36I, R41K, L63P, K70RD
 MBA1456MBA1456KJ907135None   I13V, I15IV, E35D, M36MI, R41RK, L63Q, I64V, E65ED, V77VID
 MBA1247MBA1247KJ906941None   E35D, M36I, R41K, L63PD
 AMU031AMU031KJ906651None   K20KR, E35D, M36I, N37ND, R41K, R57RKD
 MBA1509MBA1509KJ907185None   E35D, M36I, R41K, H69K, L89MD
 MBA1282MBA1282KJ906973None   I15V, E35D, M36I, R41K, I64VD
 MBA1042MBA1042KJ906743None   L33LV, E35D, M36I, N37D, R41K, K43R, I64V, H69YD
Meixenberger (2014)11-0131811-01318KJ771509None   T12A, E35D, N37S, R41K, D60E, Q61N, I62V, L63P, V77I, I93LD
 09-0354509-03545KJ771122None   I13V, L19I, E35D, L63LFPS, I64IM, C67CYD
 07-0045907-00459KJ770448None   I13V, E35D, P39Q, L63T, I64L, A71V, V77VI, I93LD
 12-0021112-00211KJ771681None   K20R, E35D, M36I, R41K, L63P, I64L, H69K, V82I, L89M, I93LD
 10-0276710-02767KJ771432None   K20R, E35D, M36I, R41K, L63P, I64L, H69K, V82I, L89M, I93LD
 10-0276910-02769KJ771433None   L10M, E35D, R41K, L63T, I93LD
 11-0314611-03146KJ771580None   L10MV, E35D, R41K, L63T, I93LD
 11-0021111-00211KJ771469None   L10M, E35D, R41K, I93LD
 10-0269510-02695KJ771412None   I13V, L19I, E35D, N37ND, L63LP, I64ILM, C67CYD
 11-0338011-03380KJ771594None   T12A, E35D, N37S, R41K, D60E, Q61N, I62V, L63P, V77I, I93LD
Parczewski (2014)467_2467_2GU906860None   I13V, I15IV, G17GE, E35D, M36I, N37D, R41K, D60E, I62IV, L63LP, I64IV, K70KR, I72IMD
 934_1934_1JQ305767None   I15IV, L19LI, E35D, M36I, N37ND, R41K, K43KR, K45KR, I62IV, L63P, I64V, I93LD
 20_1020_10JQ305750None   I13V, E35D, M36I, N37D, R41K, I64VD
 467_1467_1JQ305752None   I13V, I15IV, G17GE, E35D, M36I, N37D, R41K, D60E, I62V, L63P, K70KR, I72IMD
 A051_1A051_1KM284533None   I13V, K20M, E35D, M36I, R41K, R57K, D60E, L63P, I64V, I72ED
 645_1645_1JQ305759None   I13V, E35D, M36I, N37D, R41K, K45R, I64V, E65ED, K70RD
 A000_1A000_1KM284492None   I13V, E35D, M36I, R41K, I64VD
 567_KR12567_KR12KM284375None   T12K, K14KR, I15V, L19LI, E35D, M36I, R41K, L63C, H69YD
 A009_1A009_1KM284497None   I13V, E35D, M36I, N37D, R41K, K45R, I64V, C67CY, K70KRD
 508_1508_1JQ305754None   E35D, M36I, N37D, R41K, L63P, E65D, I72VD
 258_1258_1JQ305751None   I13V, I15V, K20M, E35D, M36I, R41K, D60E, L63P, I72ED
 504_1504_1JQ305753None   K20R, E35D, M36I, N37D, R41K, L63P, E65D, I72VD
 194_KR13194_KR13KM284025None  Q58EE35D, M36I, R41K, D60E, I64V, I72VD
 I82_1I82_1KM284675None   I13V, E35D, M36I, R41K, Q61QH, L63P, I64V, C67Y, K70RD
Ross (2014)839839KF262937None   I15V, E35D, M36I, R41K, L63A, K70R, V77VID
 443443KF262696None   I13IV, E35D, M36I, R41K, R57K, I62V, L63S, I64V, E65DD
Wallis (2014)4124541245KM458590None   I13IV, G16E, L19I, E35D, N37H, R41K, L63Q, I64V, E65DD
Alexiev (2015)791_0109791_0109JQ259134None   W6L, L10V, I15V, G16E, E35D, M36I, R41K, K45R, L63T, H69Q, I93LD
 10BG118110BG1181KJ765415None   L10IM, I15V, G16E, E35D, M36I, P39S, R41K, K45R, R57K, L63PT, H69Q, I93LD
 11BG118511BG1185KJ765460None   L10M, G16E, E35D, M36I, P39S, R41K, K45R, R57K, I62IV, L63P, H69Q, I72IV, I93ILD
Bruzzone (2015)HM1487FHM1487FKP889080None   T12E, I15V, L19I, E35D, M36I, R41K, I62V, L63S, I72IM, L89ID
Budambula (2015)MK54MK54KP792048None   I15V, G16E, E35D, R41K, L63T, E65D, H69Y, I72TD
 MK21MK21KP792015None   I13V, E35D, R41K, L63P, V77ID
Carvalho (2015)108108KM205970None   Q18H, E35D, R41K, D60E, I62V, L63P, C67S, I72VD
 88KM206070None   Q18H, E35D, R41K, D60E, I62V, L63P, C67S, I72VD
Cheriro (2015)NLHG-79NLHG-79KT370901None   I15X, E35D, M36I, N37D, R41K, R57K, H69K, L89MD
 NLHG-121NLHG-121KT370878None   L10I, I13V, L19LI, E35D, R41K, I64V, H69YD
Dauwe (2015)D_00_02D_00_02KT863833None   R8P, V11S, T12S, I13V, E35D, M36I, R41K, R57RK, Y59YF, Q61HD
 D_03028D_03028KT863835None   E35D, M36IL, N37X, R41K, K45R, R57K, D60E, L63P, I64V, H69QD
 D_00_17D_00_17KT863834None   T12TA, I15V, E35D, M36I, R41K, I62V, L63P, H69QD
 D_12003D_12003KT863840None   I13V, E35D, M36I, P39T, R41K, I62V, L63P, I64V, H69YD
de Lourdes Teixeira (2015)9RJ1102369RJ110236 None   I15V, L19I, E35D, M36I, I62IV, H69Y, I72VD
 9RJ1200999RJ120099 None   T12TA, I15IV, L19IT, K20R, E35D, M36I, R41K, K43R, I62V, H69Q, I72VD
Diallo (2015)2-1-1362-1-136JX084250None   K20R, E35D, M36I, R41K, L63A, V82VID
Guimaraes (2015)RDSMG326RDSMG326KT355928None   T12S, E35D, M36I, R41K, L63PD
Guimaraes (2015)BRSP147-12BRSP147-12KP115371None   L5LF, R8RP, I15V, E35D, R41K, P44A, R57RK, I62V, E65D, K70KR, I72IV, L89LM, Q92QK, I93ILD
 BRSP718-13BRSP718-13KP115496None   L10I, E35D, M36I, R41K, L63A, H69Q, I93LD
Hora (2015)DEURF10UG007DEURF10UG007KF716489None   I13V, K20M, E35D, M36I, R41K, L63Q, I64V, E65DD
 DEURF11UG002DEURF11UG002KP109497None   I15V, E35D, M36I, R41K, V77ID
 DEMD10CM009DEMD10CM009JX140670None  L10FI13V, E35D, M36I, N37D, R41K, L63PD
 DEMD10CM018DEMD10CM018KP109501None  L10FI13V, E35D, M36I, N37D, R41K, L63PD
Kouri (2015)AIDS-RP28AIDS-RP28KP688103None   I13V, L19I, E35D, N37S, R41K, L63P, H69Q, A71TD
 AIDS-RP1AIDS-RP1KP688083None   L10I, K14R, I15V, G16E, E35D, M36I, R41K, K43R, L63P, H69K, I93LD
 N_AIDS18N_AIDS18KP688164None   I13V, K14R, E35D, N37S, R41K, L63PD
 AIDS-RP29AIDS-RP29KP688104None   E35D, M36I, N37E, R41K, K43KR, D60E, Q61E, L63P, H69Q, I93LD
 AIDS-RP2AIDS-RP2KP688094None   I15V, E35D, M36I, R41K, K43R, I62IV, L63PS, H69K, K70Q, A71T, I93LD
 C_AIDS7C_AIDS7KP688153None   K20R, E35D, M36I, N37D, R41K, K43R, Q61N, L63P, I64L, H69QD
Meini (2015)112225112225KM438266None   E35D, R41K, K43KR, I64VD
 112327112327KM438301None   T12S, E35D, N37S, R41K, L63P, A71T, V77ID
Moura (2015)BRMA_197BRMA_197KF782732None   T12K, I15V, L19I, E35D, M36I, R41K, R57K, C67ED
 BRMA_127BRMA_127KF782704None   T12K, K14T, I15V, L19I, E35D, M36I, R41K, R57KD
Sutherland (2015)77_PREKT351843None   L10LV, I13V, E35D, M36I, R41K, H69K, L89MD
 2222_PREKT351829None   I13V, E35D, R41K, R57K, L63P, H69Y, I72V, V77ID
Yao (2015)CN.iso72CN.iso72KC924480None   E35D, M36I, R41K, K55Q, D60E, Q61E, L63P, C67F, H69K, L89M, I93LD
 CN.iso71CN.iso71KC924479None   E35D, M36I, R41K, D60E, L63P, H69K, I85M, G86E, R87E, N88H, L89M, I93LD
Billings (2016)KE961896V5KE961896V5KT022410None   I13V, E35D, M36I, R41K, I64V, H69YD
 KE809646V6KE809646V6KT022416None   I13V, E35D, M36I, R41K, K45R, R57K, I62V, L63P, I64V, C67YD
Boillot (2016)MBI17MBI17KT315978None   L10I, L19I, E35D, M36I, Q61N, L63P, I64L, H69Q, V77ID
Darcissac (2016)S01DZZFS01DZZFKT998096None   I15V, E35D, M36I, N37ND, R41RK, I62V, L63P, H69QD
Fokam (2016)CIRCB-17AHCIRCB-17AHKR229770None   Q7E, L19LI, E21EK, A22AT, L24LF, E35D, M36I, N37DE, R41K, R57K, L63P, K70RD
 CIRCB-30AHCIRCB-30AHKR229779None   I15V, L19V, E35D, M36I, N37ND, R41K, L63HNPTD
Hoenigl (2016)M1403133M1403133KU574378None   I13V, E35D, M36I, R41K, R57K, Q61N, K70R, V77ID
Inzaule (2016)1.0410.4.51.0410.4.5KR138542None   I13V, K14R, E35D, M36I, R41K, R57K, L63P, H69K, L89MD
Lam (2016)2101201421012014KR867788None   E35D, M36I, R41K, Q61N, L63P, I64LD
Otecko (2016)406813406813KX306407None   T12TA, I13IV, K14KR, I15V, K20M, E35D, M36I, R41K, L63T, I64V, H69HYD
 409185409185KX306430None   I13V, K14KR, E35D, R41K, L63ATD
 412952412952KX306465None   L19I, E35D, P39Q, R41K, L63P, A71T, V77ID
 405025405025KX306399None   Q18E, E35D, N37NT, R41K, L63P, I64LD
Pessoa (2016)10BR_MG02310BR_MG023KT427837None   I15V, L19T, E35D, M36I, R41K, L63P, H69Q, V77ID
 10BR_RJ06310BR_RJ063KT427773None   Q7E, T12P, K14R, Q18QH, E35D, M36I, N37D, R41K, L63P, I64L, A71V, I72V, V77I, I93LD
Pouran Yousef (2016)433310-02769KX466979None   L10M, E35D, R41K, L63T, I93LD
 259607-00459KX465767None   I13V, E35D, P39Q, L63T, I64L, A71V, V77VI, I93LD
 447511-03380KX467063None   T12A, E35D, N37S, R41K, D60E, Q61N, I62V, L63P, V77I, I93LD
 407509-03545KX466833None   I13V, L19I, E35D, L63LFPS, I64IM, C67CYD
  10-02695KX466834None   I13V, L19I, E35D, N37ND, L63LP, I64ILM, C67CYD
 433210-02767KX466977None   K20R, E35D, M36I, R41K, L63P, I64L, H69K, V82I, L89M, I93LD
  12-00211KX466978None   K20R, E35D, M36I, R41K, L63P, I64L, H69K, V82I, L89M, I93LD
Steegen (2016)GFECB063GFECB063KU127814None   T12S, I15V, Q18E, L19I, E35D, M36I, R41K, R57K, L63Q, I64VD
 GFKZB060GFKZB060KU127926None   L19V, E35D, M36I, R41K, L63P, H69K, L89M, I93LD
 GFGPB128GFGPB128KU128176None   T4TS, K14E, I15V, K20R, E35D, M36I, I62V, L63AV, E65D, H69K, V82I, L89MD
 GFECB027GFECB027KU127718None   T12P, I15V, G16E, L19I, E35D, M36I, R41K, D60DE, Q61D, I62V, L63ST, H69K, I72ITD
 GFWCB012GFWCB012KU127778None   E35D, M36I, R41K, L63A, H69K, L89MD
Steegen (2016)GFECA005GFECA005KT893249None   I13V, E35D, N37H, R41K, R57K, L63P, A71T, I72IEKV, V77ID
Witaningrum (2016)PB35PB35KU596499None   L10I, I13V, I15V, K20I, E35D, M36I, R41K, L63P, I64L, I72TD
 PB6PB6KU596475None   L10I, I13V, I15V, K20I, E35D, M36I, R41K, L63T, I64L, A71T, I72TD
Zeh (2016)3006050_053006050_05KU248750None   E35D, M36I, R41K, Q61DE, I64VD
 3002030_053002030_05KU248697None   E35D, M36MI, R41K, R57RK, I62V, L63AT, I64IV, E65ED, V77VID
Onywera (2017)13118021311802KX790982None   I15V, E35D, R41K, L63P, I64V, I72IVD
 12014011201401KX791009None   I13V, E35D, M36I, R41K, I64VD