Author (yr) |
Patient |
Isolate |
Acc# |
PIs |
Wks | PIMajorDRMs |
PIMinorDRMs |
OtherMut | Subtype |
Jorgensen (2000) | LBJ13 | LBJ13D_0 | AJ404412 | IDV | | | | T4I, L5R, W6G, R8R*G, L10I, I13V, L23P, M36I, R41K, D60E, I62V, L63T, I64V, I72V | D |
Eshleman (2001) | A088 | AF357774 | AF357774 | NFV | 12 | | L33I | Q7D, I13V, I15IL, L63P, I64V, I72M | D |
Weidle (2001) | PW_UG4391 | PW_UG4391 | AF358746 | RTV | 43 | | | I13V, I15V, L19I, R41K, I64IL, H69Y, V82I | D |
Brindeiro (2002) | TVSP12 | TVSP12 | AY145811 | RTV | 55 | | | R8Q, I13V, E35D, M36I, R41K, Q61N, I62V, L63H, H69Q | D |
Cuevas (2002) | CU95 | CU95 | AF425476 | IDV | | | | I13V, I15V, K20M, M36I, R41K, L63P, I64L, H69Q | D |
| CU54 | CU54 | AF425435 | SQV, IDV | | | | I13V, E35D, M36I, N37D, R41K, K43R, L63P | D |
Gibb (2002) | DMG81 | 81_w56 | | NFV | 55 | D30N | N88D | I13V, R41K, L63P, A71T, V77I | D |
| DMG89 | 89_w21 | | NFV | 21 | | | I13V, L33V, N37X, P39PQ, R41K, D60E, L63P, K70KR, N88NK | D |
| DMG90 | 90_w51 | | NFV | 1 | | L23I | I13V, K20KR, E35D, M36I, R41K, I64V, E65D, V82VI | D |
Tural (2002) | 226575 | 226575 | | IDV, NFV | 131 | D30N | | I13V, E35D, M36I, N37H, R41K, Q58*, I62V, L63P | D |
Weber (2003) | 2S | IRIS2S-48 | AY140810 | SQV, RTV | 52 | | | I13V, K20R, R41K, R57RK, L63P, I64L, H69Q, I72V | D |
Montes (2004) | MB_patESTU | 01_ESTU702 | AJ577887 | SQV, RTV, NFV, IDV | 309 | M46I, I84V, L90M | V11I, G73S | L10V, I13V, K20I, L33V, I62V, L63P | D |
| MB_patROD | 00_ROD734 | AJ577982 | IDV | 82 | | | T12A, I13V, K20I, M36I, R41K, L63P | D |
Non-B Workgroup (2005) | UK1392 | UK1392 | AY900799 | SQV | 161 | L90M | | L10V, I13V, R41K, L63P, I64V, K70R, I72IV, T74S | D |
| UK1483 | UK1483 | | RTV, IDV | 172 | | | L10I, I13V, L19P, K20I, E35D, M36I, R41K, D60E, I62V, L63P, I64V, H69Y | D |
| UK1557 | UK1557 | AY900679 | NFV, SQV | 104 | D30N | N88D | L10V, I13V, E35D, M36I, R41K, L63P | D |
| UK1979 | UK1979 | | NFV | | D30N | | I13V, I15V, E35D, M36I, R41K, L63P | D |
| UK062d | UK062d | | NFV | | L90M | | L10V, I13V, L19I, K20T, E35D, M36I, R41K, I62V, L63Q, I64V, H69Y, T74S, Q92K | D |
| BR8 | BR8 | AY900888 | NFV | 43 | D30N | | L10I, T12I, I13V, I15V, K20T, E35D, M36I, R41K, K45T, L63P, I64IV, I85IV | D |
| TK1003 | TK1003 | | IDV, SQV, RTV | 100 | | | I13V, I15V, R41K, I62IV, I64V, E65D, V77I | D |
| | TK1003a | | IDV, SQV, RTV | 100 | | | I13V, I15V, R41K, I62V, I64V, E65D, V77I | D |
| TK1011 | TK1011 | | IDV | 2 | | | I13V, L19I, N37S, R41K, D60E, I64V | D |
| | TK1011a | | IDV, SQV, RTV | 65 | | | I13V, L19I, N37S, R41K, D60E, L63LP, I64V | D |
| | TK1011b | | IDV, SQV, RTV | 95 | | | I13V, L19I, N37S, R41K, D60E, L63LP, I64V | D |
| TK1024 | TK1024 | | IDV, NFV, RTV, LPV | 234 | | | I13V, K20M, M36I, R41K, K45KR, L63P, I64V, H69HY, I72E, P79PA | D |
| | TK1024a | | IDV, NFV, RTV, LPV | 277 | | | I13V, K20M, M36I, R41K, I62IV, L63P, I64V, H69HY, I72E, P79PAS | D |
| TK1028 | TK1028 | | RTV, IDV, NFV | 207 | M46I, I54V, V82T | L24I | L10I, I13V, E35D, M36I, N37S, R41K, K55R, L63P, I64V, A71V, I72V, V77I, I93L | D |
| | TK1028a | | RTV, IDV, NFV | 231 | M46I, I54V, V82T | L24I | P1PS, L10I, I13V, E35D, M36I, N37S, R41K, K55R, L63P, I64V, A71V, I72V, V77I, I93L | D |
| | TK1028b | | RTV, IDV, NFV | 308 | M46L, I54V, V82T | L24I | L10I, I13V, E35D, M36I, N37S, R41K, K55R, L63P, I64V, A71V, I72V, V77I, I93L | D |
| TK2001 | TK2001 | | SQV, RTV, NFV | 94 | M46I, I84V | N83D | L10I, I13V, A22V, E35G, M36I, I62V, L63P, I64V, A71V, I93L | D |
| | TK2001a | | SQV, RTV, NFV, LPV | 97 | M46MI, I84IV | N83ND | L10I, I13V, K14KR, A22AV, E35EG, M36I, I62V, L63P, I64V, A71AV, I93IL | D |
| TK2005 | TK2005a | | RTV, IDV | 135 | | | I13V, R41K, L63P, I64V, H69HDY | D |
| | TK2005b | | RTV, IDV, APV, SQV | 213 | I54V, V82AT | L10LF | I13V, I15IV, K20KT, R41K, L63P, I64V, A71AV, T74S | D |
| TK2016 | TK2016 | | IDV, NFV | 329 | | | I13V, M36I, R41K, I64V | D |
| TK2025 | TK2025 | | IDV, RTV, SQV | 151 | | | L10I, V11G, I13V, E21EG, T31TS, M36I, R41K, D60E, I62V, L63T, I64V, I72V | D |
| | TK2025a | | IDV, RTV, SQV, LPV | 347 | | | L10I, I13V, M36I, R41K, D60E, L63T, I64V, I72V | D |
| TK3006 | TK3006 | | RTV | 157 | I54IV, V82F, L90M | L33F | I13V, I15V, R41K, I62IV, I64GV | D |
| | TK3006a | | RTV, NFV | 194 | I54V, V82F, L90M | L33F | I13V, I15V, R41K, I64V | D |
| TK3008 | TK3008 | | SQV, NFV | 344 | I84V | N83D | L10I, I13V, A22V, M36I, R41K, I62V, L63P, I64V, H69HY | D |
| TK3011 | TK3011 | | SQV, NFV | 231 | D30N | N88D | I13V, I15V, K20T, E35D, M36I, N37NY, R41K, I64V, T74S | D |
| TK3023 | TK3023 | | RTV | 221 | I54V, V82A | L33F | I13V, L19T, K20R, E35ED, M36I, R41K, L63V, I64V | D |
| TK3037 | TK3037 | | RTV | 196 | I54V, V82A | | L10V, T12TA, I13V, K14R, G16A, R41K, K43R, I62V, L63P, A71T | D |
| TK4014 | TK4014 | | SQV, RTV, NFV | 98 | | | T12TP, I13V, I15IV, K20R, M36MI, R41K, L63H, I64V, I72IV, V77I | D |
| TK5003 | TK5003a | | LPV | 39 | | | I13V, K14KR, E35D, M36I, R41K, I64V, K70R | D |
Rhee (2005) | CA9792 | CA34173 | AY797858 | LPV | 79 | M46I, V82F, I84C | | L10V, I13V, K20T, R41K, L63P, I64V | D |
Weber (2005) | F75698 | F75698 | AY677379 | NFV | 39 | | | I13V, R41K, L63Q, I64V | D |
| F75744 | F75744 | AY677393 | NFV | 76 | | | I13V, R41K, D60E, L63LP, I64V, H69HY, V77I | D |
| F55140 | F55140 | AY677472 | RTV, NFV | 197 | M46I, L90M | Q58QE | I13V, R41K, I62IV, L63Q, I64V, T74K, V77I | D |
| M62703 | M62703 | AY677478 | RTV | 93 | I54IV, V82VA | | L10LV, I13V, K14KIM, I15IV, K20KR, M36I, R41K, I62IV, L63LP, I64V, H69Y | D |
| F63925 | F63925 | AY677483 | SQV | 97 | | | I13V, L19Q, M36I, R41K, I64V, H69Y, I72V | D |
Baxter (2006) | 12-1134 | 1134-30326 | DQ876024 | PI | NA | V32I, M46I, I47V, I54M, I84V, L90M | L10F, L33F, L89V | I13V, I15V, K20T, M36I, N37S, R41K, L63P, A71V, G73D, I93L | D |
| 12-2258 | 2258-30721 | DQ876701 | PI | NA | I54V, V82A | L10F | I13V, G16E, K20I, E35D, M36I, P39S, R41K, K45A, R57KT, I62V, L63C, I64V | D |
| 12-3077 | 3077-30403 | DQ877151 | PI | NA | D30N | L10F, N88D | I13V, K14R, E35D, M36I, R41K, I62IV, L63Q, I64V | D |
| 48-1429 | 1429-30424 | DQ877819 | PI | NA | M46I, I54V, V82T | L24I | L10I, I13V, E35D, M36I, N37S, R41K, K55R, L63P, I64V, A71V, I72V, V77I, I93L | D |
| 48-1439 | 1439-30929 | DQ877829 | PI | NA | M46I, I54V, L76LV, V82A, L90M | L10FI | I13V, K20I, E34EK, M36I, R41K, I62V, L63P, I64IV, A71T, L89LI, I93L | D |
| 48-3056 | 3056-30318 | DQ877968 | PI | NA | M46I, I54V, L76V, V82T | L10F, L89V | I13V, K20M, M36I, R41K, I62V, L63P, A71V, I72V, I93L | D |
| 48-3083 | 3083-30313 | DQ877992 | PI | NA | V32I, M46I, I47V, I54V, V82A, L90M | K43T, F53L, G73S, L89V | L10V, T12I, I13V, G16A, K20I, M36I, K55R, L63P, A71V | D |
| 48-4165 | 4165-30410 | DQ878398 | PI | NA | M46MI, I54V, V82S | L24I | L10I, I13V, L19I, K20IM, M36I, R41K, L63P, A71V | D |
| 48-5014 | 5014-30514 | DQ878549 | PI | NA | M46I, I54V, V82A, L90LM | L10F, Q58E | I13V, K20I, E35D, M36I, R41K, D60E, I62V, L63P, I64V, N83S | D |
| 48-7102 | 7102-40225 | DQ878956 | PI, RTV, TPV | >30 | M46I, I47A, I84V | | L10V, I13V, K20T, L33V, M36I, N37C, R57K, L63P, I64V | D |
| 48-7134 | 7134-30729 | DQ878972 | PI | NA | V32I, M46L, V82A, L90M | K43T, L89V | I13V, K20R, M36I, I62V, L63P, A71V | D |
| 48-8016 | 8016-30826 | DQ879061 | PI | NA | M46L, I54L | L10F, Q58E | I13V, K20T, E35ED, M36I, N37ND, R41K, L63Q, I64V | D |
Laurent (2006) | CK2-84 | 02CM-84 | AM279448 | NFV | 105 | | L10F, L33I, N88G | I13V, E35D, M36I, N37E, R41K, V56A, I62V, L63P, H69Y, A71T, I72T | D |
von Wyl (2007) | 24 | 10516511 | EF449876 | RTV, PI | NA | | | L10V, I13V, E35D, M36I, R41K, I62V, L63H, I64V | D |
| 128 | 5248038 | EF449884 | PI | NA | L90M | L24I | L10I, I13V, E35G, M36I, R41K, I62V, L63P, A71T, T74A, V75I | D |
Waleria-Aleixo (2008) | 08PR060720 | 08PR060720 | FJ591542 | PI | NA | I54V, V82T | L24I, F53L | L10V, I13V, K20R, E35D, M36V, N37T, R41K, R57K, I62V, L63P, I64V, A71V, T74S | D |
| 08RJ060471 | 08RJ060471 | FJ591665 | PI | NA | | | L10V, I13V, E35D, M36I, R41K, L63P | D |
| 08PR060753 | 08PR060753 | FJ591549 | PI | NA | V32I, M46MI, I54V, L90M | L33I, K43T, F53L | L10V, I13V, G16E, L19LI, K20M, E35EG, M36I, L63R, I66F, H69R, A71V, I72IV | D |
| 08PR050232 | 08PR050232 | FJ591261 | PI | NA | I54L, V82A, L90M | L33F, K43T, F53L | L10V, I13V, I15IV, K20R, E35D, M36I, R41K, I62V, L63P, H69K, A71I, T74S, I93IM | D |
| RES2 | RES2 | FJ591822 | PI | NA | D30N | | L10I, T12I, I13V, I15V, K20T, E35D, M36I, R41K, K45T, L63P, I64IV, I85IV | D |
Dau (2010) | 07059A | 07059A | GU581816 | PI | NA | M46MI, I54V, V82A, L90LM | | L10I, I13V, I15V, K20V, M36I, R41K, I62V, L63Q, I64V, E65D, I72V, T74S | D |
Jones (2012) | 145636 | 145636 | JN669661 | PI | NA | | | L10I, I13V, E35D, M36I, R41K, Q61D, L63T, K70F, I72T | D |
| 200084 | 200084 | JN671190 | PI | NA | M46I, I54IV, I84V, L90M | L33F, K43KT, T74P | L10I, I13V, K20KR, M36I, R41RK, K55KR, I62V, L63P, H69K, K70KT, A71V, T91S | D |
Kouri (2012) | CU1373-09 | CU1373-09 | JQ585294 | PI | NA | V32I, M46L, L76V, V82A | L10F, L33F, L89V | I13V, K20R, M36I, N37D, R41K, K43R, Q61N, L63P, A71V, Q92K | D |
| CU373-10 | CU373-10 | JQ585388 | PI | NA | M46I, I54V, L76V, V82A | L24I, L33F | L10I, I13V, K20R, E35D, M36I, N37D, R41K, D60E, I62V, L63P, A71V, I93L | D |
| CU547-11 | CU547-11 | JQ585510 | PI | NA | | | I13V, K14R, M36I, N37D, R41K, K43R, Q61E, L63P, H69Q | D |
| CU691-09 | CU691-09 | JQ585261 | PI | NA | D30N, V32I, M46I, I47V, I54L, V82A | L10LF, L33F, F53FL, Q58E, N88D | I13V, I15V, L19I, K20R, E35D, M36L, N37T, R41T, K45R, D60E, L63P, H69Q, K70R, I72V, V77I, L89F | D |
| CU25-10 | CU25-10 | JQ585358 | PI | NA | M46L, I54V, V82A, L90M | L33F, K43T, F53L, G73S | L10V, I13V, L19LI, K20R, E35D, M36I, N37D, R41K, K55R, L63P, H69K, K70T, A71I, I93L | D |
| CU75-11 | CU75-11 | JQ585492 | PI | NA | | | I13V, K14R, K20I, E35D, M36I, R41K, I64V | D |
| CU163-10 | CU163-10 | JQ585454 | PI | NA | | | Q2H, L10V, I13V, E35D, M36I, R41K, K45R, R57K, D60E, L63P, H69Q, V77I | D |
| CU1960-09 | CU1960-09 | JQ585327 | PI | NA | V82VA | | I13V, K14R, M36I, R41K, R57K, I62V, L63P, I93L | D |
| CU1288-09 | CU1288-09 | JQ585288 | PI | NA | V32I, M46L, L76V, V82A | L33LF, L89V | L10I, I13V, K20R, M36I, N37D, R41K, K43R, Q61N, L63P, A71V, Q92K | D |
| CU90-10 | CU90-10 | JQ585361 | PI | NA | I50V, I54L, L90M | L10F, L33F, K43T, F53L, L89V | Q2P, L5F, I13V, I15V, Q18L, L19I, K20T, E35D, M36I, N37G, R41K, D60E, L63P, H69HY, A71IV, V77I, V82I, I93IL | D |
| CU1483-09 | CU1483-09 | JQ585297 | PI | NA | M46I, L90M | | I13V, E35D, M36I, R41K, L63P, H69Q | D |
| CU1209-09 | CU1209-09 | JQ585279 | PI | NA | M46L, I54M, V82A | L10F, L24I, L33F, Q58E | I13V, K20R, M36I, R41K, K43KR, I62V, L63P, E65ED, A71V | D |
| CU1959-09 | CU1959-09 | JQ585326 | PI | NA | M46L, I54L, V82T, L90M | L33F, T74P | L10I, I13V, E35D, M36I, R41K, K43R, K55R, L63P, H69Q, A71V, I93L | D |
| CU54-11 | CU54-11 | JQ585475 | PI | NA | | | R8RL, I13V, L19T, R41K, R57K, D60E, Q61E, L63P, V77I | D |
| CU311-10 | CU311-10 | JQ585381 | PI | NA | I50V, I54L, L90M | L33F, K43T, F53L, L89V | V11L, I13V, I15V, Q18L, L19I, K20T, E35D, M36I, N37D, R41K, D60E, L63P, H69Y, A71I, V77I, V82I | D |
Reynolds (2012) | B0715 | B0715-2 | JN652205 | LPV | | | L33I | I13V, M36T, P39S, R41K, L63S, I64V | D |
| G0715 | G0715-2 | JN652208 | LPV | | | | L10V, I13V, R41K, R57K, I64V, T74S, V77I | D |
| J0594 | J0594-2 | JN652209 | LPV | | | | I13V, M36I, R41K, K45R, I64V, I72V | D |
| J0700 | J0700-0 | JN652164 | LPV | | | | L10LI, I13V, K20R, L33V, M36I, R41K, I64V, H69HY, I72IT, V75I | D |
| | J0700-1 | JN652200 | LPV | | | | L10LI, I13V, K20R, L33V, M36I, R41K, I64V, H69HY, I72IT, V75I | D |
Alcantara (2013) | BRGO4151 | BRGO4151 | JN662432 | LPV | | | | L10V, I13V, G16E, M36I, R41K, L63T | D |
Inzaule (2013) | 317 | 317 | JQ914083 | NFV | | | | I13V, I15V, M36I, R41K, I62V, L63S, I64V, E65D | D |
Van Zyl (2013) | O850 | 1190 | KC422951 | LPV | 26 | | | I13V, I15V, K20M, E35D, M36I, R41K, I64V | D |
| | 1779 | KC423400 | LPV | 78 | | | I13V, I15V, K20M, E35D, M36I, R41K, I64V | D |
| O1799 | 2567 | KC423747 | LPV | 26 | | | L10I, I13V, G16E, M36I, R41K, L63Q, I64V, E65D, H69C | D |
| O478 | 2100 | KC423617 | LPV | 156 | M46I, I54V, L76LV, V82A | Q58E | L10V, T12P, I13V, G16GE, K20R, M36I, R41K, Q61QR, I64V, P79PH | D |
de Lourdes Teixeira (2015) | 9RJ110302 | 9RJ110302 | | PI | NA | | | I13V, K20KT, E35D, M36I, R41K, L63P | D |
| 9RJ120441 | 9RJ120441 | | PI | NA | | | I13V, E35D, R57K, Q61N, L63S | D |
Diaz (2015) | RenG15645 | RenG15645 | KT746673 | PI | NA | M46I, I54V, I84V, L90M | L10F, F53L, T74P | I13V, K20R, E35D, M36I, R41K, K55H, R57K, L63P, H69R, A71V, L89I, T91S, Q92K | D |
| RenG15698 | RenG15698 | KT746726 | PI | NA | V32I, M46ML, I47A | | L10I, I13V, K14KIR, I15V, K20R, E35D, M36I, N37E, R41K, R57K, I62V, L63LP, I64L, H69Y, I93L | D |
| RenG17128 | RenG17128 | KT748156 | PI | NA | M46I, I50V, L76V, V82A | L23LI, V32A, L33F, Q58E | T12K, I13V, I15V, L19V, K20T, E34A, E35D, M36I, N37E, R41K, I62IV, I64V, K70R, V77I, L89LIM | D |
| RenG16876 | RenG16876 | KT747904 | PI | NA | I50L, V82A | L33F | I13V, K20KT, E35D, M36I, R41K, L63A, A71V, T91S | D |
| RenG15911 | RenG15911 | KT746939 | PI | NA | L90M | G73GS | I13V, I15V, K20T, E35D, M36I, R41K, I62V, L63P, A71AITV, T74S | D |
| RenG16632 | RenG16632 | KT747660 | PI | NA | D30N, L90LM | L23I, L33F, F53L, N88D | I13V, K14KR, I15V, K20V, E35G, R41K, D60E, L63P, A71I, T74S, V77I, L89I, I93L | D |
| RenG17154 | RenG17154 | KT748182 | PI | NA | N88NS, L90M | F53FL, G73GS | T12M, I13V, I15V, L19V, K20T, E35D, M36I, R41K, R57K, Q61N, L63P, T74S, V77VI, Q92K | D |
| RenG15230 | RenG15230 | KT746258 | PI | NA | | | L10V, I13V, K20KT, M36I, N37D, L63LP, I64IV | D |
| RenG12125 | RenG12125 | KT743153 | PI | NA | | | T12AS, I13V, M36I, N37S, R41K, R57K, L63P | D |
| RenG13236 | RenG13236 | KT744264 | PI | NA | M46I, V82A, N88GS | L33F, Q58E | L10V, I13V, I15V, K20T, E35D, M36I, R41K, I62V, L63P, A71T, I72T | D |
| RenG12819 | RenG12819 | KT743847 | PI | NA | I54V, V82S, L90M | L33F, F53L | Q7D, L10I, I13V, K20T, E34N, E35D, M36I, N37NT, R41K, I62V, L63AP, I64L, A71M, I72V, T74S, V77L, I93L | D |
| RenG12091 | RenG12091 | KT743119 | PI | NA | M46I, I54V, V82A, L90M | G73S, L89V | L10V, I13V, K20T, L33L_L, M36I, R41K, K55R, I62IV, L63P, I64IL, A71V, I93L, N98I | D |
| RenG10814 | RenG10814 | KT741842 | PI | NA | | | L10V, T12A, I13V, K14R, M36I, R41K, Q61N, L63P, L89M | D |
| RenG10884 | RenG10884 | KT741912 | PI | NA | D30N, I54V, V82A, L90M | L10F, L33F, F53L, N88D | I13V, I15V, G17D, L19I, K20T, E35N, M36I, N37E, R41T, K45V, D60E, Q61N, L63P, K70R, V77I, L89F | D |
| RenG11632 | RenG11632 | KT742660 | PI | NA | G48V, I54S, V82A, L90M | Q58E | L10I, I13V, L19T, K20I, L33L*, E34Q, E35D, M36I, N37D, D60E, I62V, L63Q, I64V, T74S | D |
Sutherland (2015) | 22 | 22_POST | KT351828 | LPV | | | | I13V, E35D, M36MI, R41K, R57K, L63P, H69Y, I72V, V77VI | D |
| 23 | 23_POST | KT351830 | LPV | | | | I13V, I15IV, M36I, R41K, I64V | D |
Ndahimana Jd Riedel (2016) | 2163 | 2163 | KT982499 | LPV | | | | I13V, I15V, M36I, R41K, D60E, Q61E, I64V | D |
Steegen (2016) | ZA13GFGPC068 | ZA13GFGPC068 | KU253000 | LPV | | | | I13V, G16E, M36I, R41K, I62V, L63H, I64V, E65D | D |
Svard (2017) | 2nd_2033 | 2nd_2033 | KX775278 | LPV | 142 | | | I13V, R41K, Y59H, Q61N, I64V, V77I | D |