<!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

Protease Inhibitors

Subtype D
Gene PR
Mutation L10V
Rx PI-naive
IncludeMixtures No
References 53
Patients 133
Isolates 139
 
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Sequences matching input query are shown below. Original reference, patient identifier, isolate name, partial treatment histories and accession number are indicated. Complete treatment histories, when available, can be accessed by clicking the isolate name. Sequences may additionally be downloaded in the fasta format, or viewed as individual or composite alignments using the options above. If the user wishes to view individual alignments of isolates for which there are multiple clones, the user can choose to view either an alignment of consensus sequences derived from the clones or an alignment of each clone as well as a consensus sequence.

Author (yr) Patient Isolate Acc# PIs WksPIMajorDRMs PIMinorDRMs OtherMutSubtype
Gao (1998)94UG11494UG114U88824None   L10V, I13V, M36I, R41K, L63P, I64LD
 84ZR08584ZR085U88822None   L10V, E35D, M36I, R41K, Q61HD
Neilson (1999)MB2059MB2059AF133821None   L10V, I13V, I15V, G16X, M36I, R41K, I64V, H69RD
Vergne (2000)LVMP634LVMP634AJ286968None   L10V, I15V, L19V, E35D, M36I, R41K, R57K, I62V, L63S, H69Q, K70Q, V77ID
Eshleman (2001)SE549SE549AF388149None   L10V, T12A, I13V, M36I, R41K, D60E, L63P, I64VD
Weidle (2001)PW_UG474PW_UG474AF358759None   L10V, I13V, M36I, R41K, L63X, I64VD
  PW_UG474a None   L10V, I13V, M36I, R41K, L63X, I64VD
Eshleman (2002)111982s111982sAF410203None   L10V, I15IV, R41K, H69Y, I93ILD
Fonjungo (2002)CM145CM145AF406712None   L10V, I15V, E35D, M36I, R41K, L63P, H69Q, I93LD
Brindeiro (2003)BRP2119BRP2119AY213401None   L10V, G16E, P39S, I62V, L63P, I72VD
Eshleman (2004)SE549SE549_7dAY428693None   L10V, T12A, I13V, M36I, R41K, D60E, L63P, I64VD
Eshleman (2004)ESH_Pat48ESH553AY435307None   L10V, M36I, R41KD
 ESH_Pat96ESH647AY435325None   L10V, I13V, K20R, M36I, R41K, I64V, E65D, I72VD
 ESH_Pat116ESH583AY435309None   L10V, T12A, K14KR, I15IV, M36MI, R41K, D60ED
Gulick (2004)RG224RG224w0 None   L10V, T12I, I13V, N37D, L63P, I93LD
Konings (2004)KF_Pat300CM4869AY359685None   L10V, E35D, R41K, L63PD
 KF_Pat400CM4877AY359686None   L10V, T12S, L19I, E35D, M36I, R41K, L63Q, I64VD
 KF_Pat600CM1457AY359688None   L10V, I15V, E35D, M36I, R41K, L63P, H69Q, I93LD
Non-B Workgroup (2005)UK4684UK4684AY901208None   L10V, I13V, K20R, M36I, N37D, R41K, D60E, I64VD
Saad (2005)SM_01YE38601YE386AY795903None   L10V, I13V, K14M, R41K, I64VD
Rodrigues (2006)BR04RS109BR04RS109DQ070615None   L10V, I15V, M36I, N37K, R41N, H69K, L89MD
Tebit (2006)A543A543DQ682729None   L10V, I15V, L19T, L38V, R41K, R57K, Q61H, L63P, V77ID
Vergne (2006)LV_02CM-CK1_1802CM-18AM181793None  Q58EL10V, E35D, M36IL, N37E, R41K, R57K, D60T, Q61D, L63P, H69QD
Vidal (2006)NV_LBR03202.LBR032AM041025None   L10V, N37S, R41K, L63Q, I64V, H69Y, V77ID
Baker (2007)9454KI03-9454KIAY803475None   L10V, I13V, M36I, R41K, I64V, E65DD
Church (2007)553-130284W553EF612063None   L10V, I15IV, M36I, R41KD
 647-135041K647EF612093None   L10V, I13V, K20R, M36I, R41K, L63LIRS, I64V, E65D, I72VD
 857-146456T857EF612171None   L10V, I13V, M36I, R41K, L63S, I64VD
Galluzzo (2007)M20810UG_M20810JQ220125None   L10V, I13V, I15V, M36I, R41K, I64VD
von Wyl (2007)12610517835EF449780None   L10V, I15IV, E35D, M36I, R41K, L63PS, I72AVD
Holguin (2008)SP17-340928SP17-340928EU255320None   L10V, I13V, K14R, R41K, R57K, L63P, I64VD
 SP27-289350SP27-289350EU255400None   L10V, I13IV, E35D, N37H, R41K, I62V, L63P, A71TD
Ndembi (2008)CMYD-5604CMYD-56DQ990421None   L10V, I13V, G17D, K20R, E35D, M36I, R41K, L63T, H69QD
Ndembi (2008)IAEAM009IAEAM009EU306748None   L10V, I13V, G16E, M36I, P39L, R41K, I62V, L63S, I64V, H69Y, I72VD
 IAEM034IAEM034EU306765None   L10V, I13V, R41K, R57K, I64V, H69ID
Nyombi (2008)TMS220TMS220EU251853None   L10V, I13V, E35D, P39Q, R41K, D60E, L63P, I64V, H69K, A71T, V77ID
Aghokeng (2009)CYM078CYM078GU191592None   L10V, G16E, E35D, N37S, R41K, R57K, L63CD
Bartolo (2009)CSE11601AOCSE116EU068199None   L10V, I13V, K14T, I15V, G16E, K20R, E35D, M36I, R41K, R57K, L63T, E65D, I72T, L89MD
 HAB8301AOHAB83EU068217None   L10V, I13V, I15V, G16E, E35D, M36I, N37S, R41K, R57K, L63T, L89MD
 HAB8501AOHAB85EU068218None   L10V, I13V, I15V, G16E, K20R, E35D, M36I, R41K, R57K, L63T, H69S, L89MD
 HDC23901AOHDC239EU068231None   L10V, I13V, K14R, G16E, E35D, M36I, R41K, L63H, I64V, H69Q, I72VD
Eshleman (2009)D08444W307-156544FJ389051None   L10V, I13V, K20R, M36I, R41K, L63T, I64V, E65D, I72VD
 C25290W308-102854FJ389144None   L10V, I13V, G16E, M36I, R41K, L63Q, I64V, V75VID
Hawkins (2009)P650ZZP650FJ931154None  L33FL10V, I13V, K20V, M36I, N37S, P39S, R41K, L63T, I64V, E65D, I72VD
Brennan (2010)Pat114ARC-A117JN697265None   L10V, I13V, I64VD
Castelbranco (2010)090037A090037AHM357748None   L10V, I13V, M36I, R41K, I64V, K70RD
Ndembi (2010)13765D_P113765GQ409558None   L10V, M36I, L63V, I64V, H69KD
Towler (2010)8338994-EHM037818None   L10V, G17E, R41K, D60DE, L63P, A71AT, I72IVD
  418316-GHM037887None   L10V, G17E, R41K, L63P, A71T, I72VD
  505503-GHM037899None   L10V, G17DE, R41K, L63P, A71T, I72VD
 439553-X439553-XHM037830None   L10V, I13V, G16E, K20R, M36I, P39S, R41K, I62V, L63P, I72VD
Aghokeng (2011)SK4064-PISK4064-PIHQ864354None   L10V, I15V, E35D, M36I, R41K, I62V, C67D, V82VID
Carvalho (2011)O17-83O17-83GU214097None   L10V, T12Q, I15V, M36I, N37E, R57K, L63P, I72T, I93LD
Florea (2011)105_2008105_2008JQ083016None   L10V, I15V, G16E, K20R, E35D, M36I, P39S, R41K, R57K, L63T, E65D, I72T, T74S, L89MD
 1121_20071121_2007JQ083024None   L10V, T12S, I13V, I15V, G16E, L19I, K20R, E35D, M36I, R57K, L63T, E65D, I72T, L89MD
 1636_20071636_2007JQ083030None   L10V, T12I, I13V, I15V, G16E, E35D, M36I, N37D, R41K, K45R, R57K, I62V, L63T, E65D, I72T, T74TA, L89MD
 1649_20071649_2007JQ083031None   L10V, G16E, K20R, E35D, M36I, R41K, R57K, I62V, L63T, L89MD
 1933_20071933_2007JQ083039None   L10V, I15V, L19I, E35D, M36I, R41K, R57K, L63T, E65D, I72T, L89M, I93LD
 2360_20082360_2008JQ083043None   L10V, I13V, G16E, K20R, E35D, M36I, R41K, R57K, L63T, E65D, I72T, L89MD
 3004_20073004_2007JQ083048None   L10V, I13V, G16E, K20R, E35D, M36I, R41K, R57K, L63T, E65D, L89MD
 4171_20074171_2007JQ083056None   L10V, I13V, I15V, G16E, E35D, M36I, R41K, R57K, I62V, L63T, E65D, I72TD
 4175_20074175_2007JQ083057None   L10V, I13V, I15V, G16E, E35D, M36I, R41K, R57K, L63T, E65D, I72TD
 4638_20084638_2008JQ083062None   L10V, I15V, K20R, E35D, M36I, R41K, R57K, L63T, E65D, I72T, T74S, L89MD
 4646_20074646_2007JQ083068None   L10V, I13V, I15V, G16E, K20R, E35D, M36I, P39T, R41K, L63T, E65D, I72T, L89MD
 4887_20074887_2007JQ083075None   L10V, I13V, I15IV, G16E, K20R, E35D, M36I, R41K, R57K, L63T, E65D, L89MD
Hamers (2011)CP076301686CP076301686HQ993682None   L10V, I13V, G16E, M36I, R41K, D60DE, L63H, I64V, H69C, I72VD
 CP076301713CP076301713HQ993707None   L10V, T12PQ, I13V, G16E, R41K, L63T, E65D, V77ID
 CP076302306CP076302306HQ993852None   L10V, I13V, L19I, R41K, L63P, I64V, I72ED
 CP076300738CP076300738HQ994929None   L10V, I13V, G16E, E35ED, M36I, N37D, R41KD
 CP076300900CP076300900HQ994971None   L10V, I13V, I15V, R57RK, L63Q, I64VD
 CP076301864CP076301864HQ995000None   L10V, I13V, M36I, R41K, L63P, I64V, E65DD
 CP076302063CP076302063HQ995026None   L10V, I13V, L19T, P39T, R41K, L63P, I64LD
 CP076303007CP076303007HQ995072None   L10V, I13V, G16E, K20R, M36I, P39S, R41K, I64V, K70KRD
 CP076303027CP076303027HQ995090None   L10V, I13V, M36I, R41K, I64VD
 CP076300896CP076300896HQ995142None   L10V, I15L, L33V, L63Q, I64VD
 CP076301995CP076301995HQ995180None   L10V, L19I, M36I, R41K, D60E, I62V, L63V, I64VD
 CP076302024CP076302024HQ995193None   L10V, I13V, K20R, E35D, M36I, L63P, H69QD
 CP076302051CP076302051HQ995203None   L10V, I13V, G16E, E35D, R41K, R57K, L63R, I64V, E65D, I72MD
 CP076303041CP076303041HQ995225None   L10V, I13V, M36L, R41K, D60E, Q61E, I62V, L63P, I64VD
 CP076303048CP076303048HQ995231None   L10V, I13V, R41K, D60E, Q61E, L63P, I72VD
 CP076303049CP076303049HQ995232None   L10V, I13V, M36I, L63P, I64V, I72VD
 CP076303056CP076303056HQ995237None   L10V, I13V, M36L, N37D, R41K, L63P, I64V, H69Y, K70T, I72TD
 CP076303089CP076303089HQ995266None   L10V, I13V, M36I, R41KD
 CP076303105CP076303105HQ995281None   L10V, I13V, R41K, L63P, K70RD
 CP076300705CP076300705HQ995311None   L10V, T12K, I13V, G16E, L19V, N37S, R41K, L63H, I64V, V77ID
 CP076300752CP076300752HQ995330None   L10V, I13V, M36I, R41K, L63LFPS, I64VD
 CP076300772CP076300772HQ995340None   L10V, I13V, G16E, M36I, R41K, L63CD
 CP076301948CP076301948HQ995413None   L10V, I13V, M36IL, N37D, R41K, D60E, L63P, I64V, H69Y, I72V, V77ID
 CP076301963CP076301963HQ995427None   L10V, I13E, I15K, M36I, R41K, I64VD
 CP076301964CP076301964HQ995428None   L10V, M36I, R41K, I64V, C67CYD
 CP076301972CP076301972HQ995436None  V11IL10V, K20V, M36I, P39T, R41K, L63Q, I93MD
 CP076301975CP076301975HQ995439None   L10V, T12K, I13V, L19I, M36I, N37D, R41K, L63P, I64L, I72IVD
 CP076301982CP076301982HQ995443None   L10V, I13V, G17E, M36I, R41KD
 CP076301984CP076301984HQ995445None   L10V, L33LV, M36I, N37S, R41K, I64VD
 CP076301994CP076301994HQ995449None   L10V, M36I, R41K, L63P, I93LD
 CP076302078CP076302078HQ995462None   L10V, M36V, N37NY, R41K, D60E, L63P, I64V, I72IVD
 CP076302079CP076302079HQ995463None   L10V, T12K, G17E, M36I, R41K, L63P, I64L, H69QD
 CP076302897CP076302897HQ995469None   L10V, I13V, M36I, R41K, L63C, I64VD
Kasang (2011)3263832638HM572344None   L10V, I13V, M36I, R41K, L63P, H69YD
 1719317193HM572354None   L10V, T12I, I13V, G16E, M36I, N37T, P39S, R41K, L63C, I64VD
Ndembi (2011)AICPS339AICPS339HQ702643None   L10V, I13V, R41K, L63T, I64V, E65DD
 AICPS337AICPS337HQ702667None   L10V, I13V, I15V, M36I, R41K, I64V, C67YD
Avila-Rios (2012)M0CFM68ISMM0CFM68ISMKC169240None   L10V, N37E, R41K, D60N, L63P, I72E, V77I, I93LD
 MF00MB0PUEMF00MB0PUEKC169304None   L10V, T12I, I13V, R41K, L63PD
 OF00M98GSHOF00M98GSHKC169487None   L10V, I15V, M36I, R41K, L63AD
 P2F0MBCLYRP2F0MBCLYRKC169567None   L10V, K14R, N37D, L63P, I64M, E65K, A71V, V77I, I93LD
De Gascun (2012)IRL03800IRL03800JN622620None   L10V, E35D, M36I, N37E, R41K, L63P, C67SD
Delwart (2012)479-7344-2479-7344-2JN215100None   L10V, I13V, M36I, K45R, L63P, I64L, V77I, I93LD
Escobar (2012)ES142ES142JX467006None   L10V, T12R, I15V, Q18L, L19V, R41K, L63P, I72V, V77I, I93LD
Hassan (2012)RS09000858RS09000858HQ441603None   L10V, I13V, M36I, N37D, R41K, I64V, H69YD
 RS09000935RS09000935HQ441677None   L10V, T12TK, I13V, M36I, R41K, D60E, L63PD
 RS11000291RS11000291JQ698378None   L10V, I13V, R41K, Q61QE, L63AP, I72EVD
Karlsson (2012)SE_265SE_265JQ698851None   L10V, I13V, K14KR, G16GE, M36I, R41RK, I62V, L63N, I64VD
Machado (2012)CUPL0931CUPL0931HQ655364None   L10V, I13V, G16A, M36I, R41K, H69QD
 CUPL1062CUPL1062JN000034None   L10V, E35D, M36I, R41K, D60E, L63P, H69Q, V77ID
Nazziwa (2012)10236201023620JX498972None   L10V, I13V, I15V, E35D, M36I, N37S, R41K, K45R, R57K, L63Q, I64VD
Reynolds (2012)D0761D0761-0JN652148None   L10V, T12TA, I13V, M36I, R41K, I64VD
  D0761-1JN652181None   L10V, I13V, M36I, R41K, I64VD
 F0703F0703-1JN652191None   L10V, I13V, K14KR, E35D, M36I, R41K, I64V, H69HYD
 G0715G0715-0JN652158None   L10V, I13V, R41K, R57RK, L63LV, I64V, I72IV, T74S, V77ID
  G0715-1JN652194None   L10V, I13V, Q18QR, R41K, R57K, I64V, T74S, V77ID
Sigaloff (2012)KELKN210KELKN210JN628484None   L10V, I13V, I15V, M36L, R41K, L63Q, I64VD
Alencar (2013)MG2-0004MG2-0004JQ237980None   L10V, I15V, E35D, M36I, R41KD
 MG2-0017MG2-0017JQ238023None   L10V, I13V, I15V, Q18M, M36I, N37D, R41K, L63CD
 MG2-0036MG2-0036JQ238127None   L10V, I15V, L19I, K20Q, M36I, R41K, K45R, R57K, I62V, L63P, I72IV, I93LD
Frentz (2013)EHR-00912EHR-00912JX299555None   L10V, I13V, I15IV, G16E, K20R, E35D, M36I, R41K, R57K, L63T, E65D, L89MD
 EHR-20296EHR-20296JX299872None   L10V, I15V, K20R, E35D, M36I, R41K, R57K, L63T, E65D, I72T, T74S, L89MD
 EHR-25339EHR-25339JX299981None   L10V, G16E, K20R, E35D, M36I, R41K, R57K, I62V, L63T, L89MD
 EHR-27129EHR-27129JX300011None   L10V, I13V, G16E, K20R, E35D, M36I, R41K, R57K, L63T, E65D, L89MD
 EHR-64659EHR-64659JX300626None   L10V, I15V, G16E, K20R, E35D, M36I, P39S, R41K, R57K, L63T, E65D, I72T, T74S, L89MD
 EHR-71598EHR-71598JX300747None   L10V, I13V, I15V, G16E, K20R, E35D, M36I, P39T, R41K, L63T, E65D, I72T, L89MD
 EHR-76782EHR-76782JX300855None   L10V, T12I, I13V, I15V, G16E, E35D, M36I, N37D, R41K, K45R, R57K, I62V, L63T, E65D, I72T, T74TA, L89MD
Temereanca (2013)SR16SR16JX966491None   L10V, I13V, G16E, K20R, E35D, M36I, P39S, R41K, R57K, L63T, E65D, I72T, L89MD
 SR20SR20JX966497None   L10V, I13V, I15V, G16E, E35D, M36I, R41K, R57K, L63T, E65D, I72T, L89M, I93MD
 SR30SR30JX966507None   L10V, I15V, G16E, K20R, E35D, M36I, R41K, R57K, L63T, E65D, I72T, I93VD
 SR42SR42JX966518None   L10V, I13V, I15V, K20R, E35D, M36I, R41K, I62V, L63N, L89M, Q92KD
 SR60SR60JX966527None   L10V, I13V, I15V, G16E, K20R, M36I, R41K, R57K, L63T, E65D, T74S, V82I, L89MD
 SR65SR65JX966531None   L10V, I13V, I15V, G16E, K20R, E35D, M36I, R41K, K43R, R57K, L63T, E65D, I72TD
 SR66SR66JX966532None   L10V, I15V, E35D, M36I, R41K, V56G, R57K, L63T, E65D, A71N, I72T, T74S, L89MD

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