<!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

Protease Inhibitors

Subtype D
Gene PR
Mutation L10I
Rx PI-naive
IncludeMixtures No
References 41
Patients 88
Isolates 90
 
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Sequences matching input query are shown below. Original reference, patient identifier, isolate name, partial treatment histories and accession number are indicated. Complete treatment histories, when available, can be accessed by clicking the isolate name. Sequences may additionally be downloaded in the fasta format, or viewed as individual or composite alignments using the options above. If the user wishes to view individual alignments of isolates for which there are multiple clones, the user can choose to view either an alignment of consensus sequences derived from the clones or an alignment of each clone as well as a consensus sequence.

Author (yr) Patient Isolate Acc# PIs WksPIMajorDRMs PIMinorDRMs OtherMutSubtype
Cornelissen (1997)92UG06792UG067AF009405None   L10I, M36I, N37K, R41K, I64V, H69YD
Eshleman (2001)SE765SE765AF388124None   L10I, I13V, K20KR, M36I, R41K, L63Q, I64V, H69QD
Cuevas (2002)CU71CU71AF425452None   L10I, K14R, R41K, K43R, L63P, I64L, H69QD
 CU45CU45AF425426None   L10I, I13V, K20I, E35D, M36I, R41K, K45R, L63P, H69Q, L89MD
Eshleman (2002)145350k145350kAF410244None   L10I, I13V, R41K, I64V, C67G, H69Y, V77ID
Pandrea (2002)IP_97CIRMF0897CIRMF08AY140611None  L33IL10I, I13V, M36I, R41K, Q61N, L63S, I64V, C67YD
 IP_97CIRMF0597CIRMF05AY140619None   I3L, L10I, R41K, L63P, I64L, C67S, H69Q, I72V, V77ID
Soares (2003)BRP2072BRP2072AF527282None   L10I, I13V, G17E, R57K, Q61N, L63T, N98KD
Eshleman (2004)ESH_Pat82ESH783AY435367None   L10I, I13V, R41K, L63V, H69Q, A71T, V77VID
Niama (2006)CHU31CHU31FM164913None   L10I, R41K, I62V, L63C, H69Q, A71T, V77ID
Church (2007)765-140409O765EF612137None   L10I, I13V, K20KR, M36I, R41K, L63Q, I64V, H69QD
 783-140837P783EF612144None   L10I, I13V, R41K, L63IV, H69Q, A71T, V77VID
Ibe (2008)148148AB356197None   L10I, I13V, M36IL, N37D, R41I, R57RK, D60E, L63P, I64V, K70RD
Land (2008)ML1956ML1956EU110089None   L10I, I13V, I15V, M36I, R41K, L63T, H69QD
Nyombi (2008)TBK022TBK022EU251728None   L10I, I13V, M36I, R41K, L63R, I64V, C67G, K70E, I72VD
 TMS201TMS201EU251838None   L10I, I13V, L19Q, M36MI, R41K, I64V, K70R, A71TD
Brumme (2009)F8527F8527GQ371881None   L10I, I13V, G16E, M36I, R41K, L63T, I93LD
Cuevas (2009)P1293P1293.1EU822625None   L10I, I13V, M36I, R41K, K43R, L63PS, I64VD
Eshleman (2009)A05705W307-156996FJ389098None   L10I, I13V, R41K, I64V, C67SD
Vercauteren (2009)pt4ZumibsvqADGQ401020None   L10I, M36I, R41K, I62V, L63P, I64L, H69Q, I72VD
Ndembi (2010)16343D_P116343GQ409584None   L10I, I13V, L33V, R41K, I62V, L63I, I64V, I72TD
Yang (2010)20106934362010693436JQ616878None   L10I, I13V, I15V, K20I, E35D, M36I, R41K, Q61H, K70R, A71T, I72ED
 20106934532010693453JQ616908None   L10I, I13V, I15V, K20I, E35D, M36I, R41K, H69L, K70R, A71T, I72ED
Aulicino (2011)292-A1000292-A1000HQ158210None   L10I, E35D, M36I, R41K, R57K, Q61N, I64LD
Bunupuradah (2011)pt002pt002Pr None   L10I, I13V, I15V, M36I, R41K, I62V, L63P, I64V, I93LD
Florea (2011)2142_20072142_2007JQ083042None   L10I, T12AE, G16E, E35D, M36I, R41K, R57K, L63T, E65D, I72T, V77I, L89M, I93LD
 3016_20073016_2007JQ083050None   L10I, G16E, L19LI, E35D, M36I, R41K, R57K, L63T, E65D, I72T, L89LMD
Hamers (2011)CP076302198CP076302198HQ993807None   T4S, L10I, I15V, M36I, R41K, I62V, L63S, I64V, E65D, C67NSD
 CP076304223CP076304223HQ993918None   L10I, I13V, G17E, M36L, P39P*QS, R41K, Q61H, I62V, L63T, I64V, E65DD
 CP076300807CP076300807HQ994944None   L10I, I13V, M36I, R41K, D60E, I62V, L63P, C67DD
 CP076302052CP076302052HQ995021None   L10I, I13V, G16E, M36I, R41K, L63T, I64V, C67S, I72IVD
 CP076302082CP076302082HQ995036None   L10I, T12N, M36I, R41K, L63PD
 CP076302982CP076302982HQ995059None   Q7H, L10I, I13V, I15V, Q18H, K20M, M36I, N37D, R41K, L63T, I64V, E65D, K70RD
 CP076303012CP076303012HQ995077None   L10I, I13V, L19M, M36I, R41K, L63V, I64V, E65DD
 CP076303028CP076303028HQ995091None   L10I, I13V, I15V, M36I, R41K, I64V, K70RD
 CP076303031CP076303031HQ995093None   L10I, M36I, R41K, L63H, I64VD
 CP076301840CP076301840HQ995167None   L10I, I13V, L19M, M36I, R41K, L63V, I64V, E65DD
 CP076302049CP076302049HQ995201None   L10I, R41K, R57K, L63S, I64VD
 CP076303045CP076303045HQ995229None   L10I, I13V, L33V, P39Q, R41K, I64VD
 CP076300701CP076300701HQ995309None   L10I, I13V, G16E, M36I, R41K, L63P, I64V, E65DD
 CP076300786CP076300786HQ995350None   L10I, I13V, M36I, R41K, I62V, L63Q, I64V, H69YD
 CP076301986CP076301986HQ995446None   L10I, T12TS, I13V, M36I, N37D, R41K, D60E, I62V, L63P, I64V, E65D, I72VD
Truong (2011)0500225605002256 None   L10I, I13V, G16E, R41K, L63ST, I64V, E65DD
Karlsson (2012)SE_209SE_209JQ698814None   L10I, I13V, I15V, G16E, E35N, M36I, N37D, R41K, K43R, I62V, L63Q, I64V, H69QD
Machado (2012)CUPL1015CUPL1015HQ655392None   L10I, E35D, M36I, R41K, L63P, H69Q, K70Q, I93LD
 CUPL1018CUPL1018HQ655395None   L10I, I13V, G16E, E35D, M36I, R41K, I62V, L63S, I64V, H69Q, V75ID
 CUPL1028CUPL1028HQ655405None   L10I, I13V, K14R, I15V, G16E, E35D, M36I, N37S, R41K, I62R, L63P, H69QD
 CUPL1054CUPL1054JN000026None   L10I, I13V, G16E, E35D, M36I, R41K, G49E, I62V, L63S, H69QD
Murillo (2012)1128311283KC412753None   L10I, M36I, N37NK, R41K, I62V, L63P, I64MV, H69Y, I72M, V82VI, I93LD
Nazziwa (2012)50691025069102JX499003None   I3L, L10I, I13V, R41K, K45R, L63AD, A71T, I72E, V77ID
Reynolds (2012)F0719F0719-0JN652156None  V11VIL10I, I13V, E35D, M36I, R41K, K45KR, R57RK, L63X, I64IMV, L89LM, L97LID
  F0719-1JN652192None  V11IL10I, I13V, E35D, M36I, R41K, L63Q, I64VD
 G0772G0772-0JN652159None   L10I, V11L, T12P, I13V, L19I, E35D, M36I, R41K, L63*PQS, I64V, I72VD
  G0772-1JN652195None   L10I, V11L, T12P, I13V, L19I, E35D, M36I, R41K, L63Q, I64V, I72VD
 B0708B0708-1JN652172None   L10I, I13V, G16E, M36I, R41K, L63VD
Ssemwanga (2012)RCC_TDR_358745RCC_TDR_358745JQ266021None   L10I, I13V, M36I, R41K, L63Q, I64V, I72VD
Ssemwanga (2012)1444HR1444HRJF800193None   L10I, M36I, R41K, L63P, I64V, C67YD
Chow (2013)MY1IM781MY1IM781KC478036None   L10I, I13V, E35D, M36I, N37D, R41K, K43R, L63T, A71V, I72IT, I93LD
Frentz (2013)EHR-27715EHR-27715JX300019None   L10I, T12AE, G16E, E35D, M36I, R41K, R57K, L63T, E65D, I72T, V77I, L89M, I93LD
 EHR-40586EHR-40586JX300226None   L10I, I13V, I15V, E35D, P39Q, R41K, I62V, L63P, I93LD
 EHR-43863EHR-43863JX300279None   L10I, L33V, M36MI, N37X, P39Q, R41RK, L63P, I93LD
 EHR-65454EHR-65454JX300642None   L10I, I13V, L33LV, M36I, I62V, L63S, I64V, C67E, I72LD
 EHR-81275EHR-81275JX300925None   L10I, G16E, L19LI, E35D, M36I, R41K, R57K, L63T, E65D, I72T, L89LMD
Hassan (2013)RS11000327RS11000327JQ698404None   L10I, I13V, R41K, L63S, I64V, K70KR, I72LM, V77ID
Kiertiburanakul (2013)R71193R71193KC921873None   L10I, I13V, E35D, M36I, R41K, L63P, V77ID
 X12045X12045KC994377None   L10I, I13V, L19MV, E35D, M36I, R41K, L63SD
 R75009R75009KC962514None   L10I, I13V, M36I, R41K, I62V, L63S, I64VD
Smolen-Dzirba (2013)WJK11WJK11JN811577None   L10I, I13V, I15V, L19I, E35N, P39Q, R41K, I62V, L63P, I93LD
 AJK10AJK10JN811576None   L10I, I13V, E35D, P39Q, R41K, I62V, L63P, I93LD
 LJE610LJE610JN811569None   L10I, I13V, I15V, N37S, P39Q, R41K, I62V, L63P, I93LD
Temereanca (2013)SR39SR39JX966514None   L10I, I13V, I15V, G16E, E35D, M36I, P39T, R41K, R57K, L63T, E65D, I72T, L89MD
 SR6SR6JX966526None   L10I, T12K, I13V, I15V, K20I, E35D, M36I, R41K, R57K, L63T, E65D, I72V, T74S, L89MD
Bartolo (2014)09AOHDP5409AOHDP54KF853865None  V11IL10I, I13V, I15V, G16E, K20M, E35D, M36I, R41K, R57K, L63T, G73D, L89FD
 09AOHDP19709AOHDP197KF853791None   L10I, T12TM, I13V, G16E, E35D, M36I, R41K, L63T, E65D, I72T, V77I, L89MD
 09AOHDP1509AOHDP15KF853772None   L10I, L19V, E35D, M36I, N37D, R41K, Q61N, I62IV, L63S, E65D, I72T, N83NSD
 09AOHDP11609AOHDP116KF853760None   L10I, I13V, K20KR, E35D, M36I, N37D, R41K, L63TD
 09AOHDP12909AOHDP129KF853765None   L10I, P39T, R41K, L63P, A71V, V77I, I93LD
Chikata (2014)KI-922KI-922AB874219None   L10I, M36I, L63P, A71V, I72T, V77I, I93LD
Khairunisa (2014)TD2TD2KM212885None   L10I, K14R, R41K, L63Q, I72V, I93LD
Lee (2014)MBA1432MBA1432KJ907115None   L10I, I13V, M36I, R41K, I62V, L63LI, I64V, I72V, V82VID
 MBA1467MBA1467KJ907145None   L10I, I13V, K20V, M36I, R41K, C67Y, L89MD
 MBA1401MBA1401KJ907087None   L10I, I13V, L19P, M36I, R41K, K45R, L63HP, I64V, K70ITD
 MBA1508MBA1508KJ907184None   L10I, I13V, M36I, R41K, I62V, L63N, I64V, I72ITD
 AMU032AMU032KJ906652None   L10I, I13V, M36I, N37ND, R41K, I64V, I72IVD
 MBA1113MBA1113KJ906813None   L10I, I13V, M36I, R41K, I62V, L63X, I64V, E65ED, I72IVD
 MBA1005MBA1005KJ906710None   L10I, I13V, M36I, N37D, R41K, D60E, I62V, I64VD
 MBA1407MBA1407KJ907092None   L10I, I13V, L19I, K20KR, M36I, R41K, R57K, I62V, I64V, A71T, I72MD
 MBA1294MBA1294KJ906984None   L10I, I13V, K14KR, G16GE, L19P, K20I, M36I, R41K, L63A, E65D, L89MD
 MBA1226MBA1226KJ906920None   L10I, I13V, G16GE, K20R, M36I, R41K, R57K, I64V, C67QD
Meixenberger (2014)11-0069111-00691KJ771491None  V11IL10I, N37D, R41K, I62V, L63S, I64M, A71V, V77I, I93LD