| Author (yr) |
Patient |
Isolate |
Acc# |
PIs |
Wks | PIMajorDRMs |
PIMinorDRMs |
OtherMut | Subtype |
| Cornelissen (2000) | MC93GH05 | MC93GH05 | AF212277 | None | | | | I13V, G16E, K20R, E35D, M36I, N37D, G40X, R41K, L63V, G68E, H69K, K70R, L89I, T91V, I93L | CRF02_AG |
| Vergne (2000) | LV32HALD | LV32HALD | AJ286989 | None | | | | I13V, K14R, I15V, L19M, K20I, M36I, L63S, H69K, K70E, V82I, L89I | CRF02_AG |
| | LV47HALD | LV47HALD | AJ286993 | None | | | | I13V, K14R, L19S, K20M, M36I, R41K, L63P, H69K, K70R, L89I | CRF02_AG |
| Fonjungo (2002) | CM114 | CM114 | AY051223 | None | | | | I13V, K14R, G16E, K20I, M36I, R41K, H69K, I72L, L89I, I93L | CRF02_AG |
| Pandrea (2002) | IP_97CIRMF32 | 97CIRMF32 | AY140645 | None | | | | T12A, I13V, K14R, I15V, Q18K, K20I, M36I, N37D, R41K, L63P, C67E, H69K, V82I, L89I | CRF02_AG |
| Njouom (2003) | 39pro | 39pro | AY204331 | None | | | | I13V, I15V, K20I, M36I, R41K, H69K, I72M, L89I | CRF02_AG |
| Park (2003) | PSW_Pat25 | 01KR_PR04 | AY242880 | None | | | | I13V, G16E, L19P, K20I, M36I, R41K, Q61X, L63S, H69K, K70R, L89I, T91A | CRF02_AG |
| Toni (2003) | TTDpci159 | TTDpci159 | AY207727 | None | | | I50IS | I13A, I15IL, K20I, A22V, E35D, M36I, R41K, L63P, H69K, L89I | CRF02_AG |
| Eshleman (2004) | ABB207 | ABB207 | AY444247 | None | | | | I13V, K14R, K20R, E35G, M36I, N37D, R41K, H69K, L89I | CRF02_AG |
| Konings (2004) | KF_Pat83 | 01CM5630 | AY359765 | None | | | V11I | I13A, K14R, K20I, M36I, R41K, K43R, H69K, L89I | CRF02_AG |
| Carr (2005) | 4419HAL | 4419HAL | AY847438 | None | | | | I13V, K20I, M36I, N37S, R41K, L63P, H69K, L89I | CRF02_AG |
| Carr (2005) | 01NGPL644 | 01NGPL644 | DQ013276 | None | | | | I13V, K14R, K20V, M36I, R41K, K43R, H69K, L89I | CRF02_AG |
| Holguin (2005) | P00046014 | 02_46014 | AY248298 | None | | | | I13V, K14R, K20I, M36L, N37S, R41K, H69K, L89I | CRF02_AG |
| Non-B Workgroup (2005) | PL37784 | 66968 | AY901083 | None | | | | I13V, K14R, G16E, K20I, M36I, R41K, L63S, I64M, H69K, K70R, I72IM, L89I | CRF02_AG |
| Tovanabutra (2005) | 99US_MSC1134 | 99US_1134 | AY444809 | None | | | V11I | I13V, K20I, M36I, R41K, L63LP, C67CY, H69K, I72M, L89I | CRF02_AG |
| Zeh (2005) | 99NG895 | 99NG895 | AY103360 | None | | | | I13V, K14R, L19P, K20I, M36I, R41K, K43R, L63P, H69K, L89I, I93L | CRF02_AG |
| Babic (2006) | DB_SI8427-04 | SI8427-04 | AJ971096 | None | | | | L10I, I13V, K14R, K20IM, M36T, R41K, L63P, C67F, H69K, L89I | CRF02_AG |
| Koizumi (2006) | YK_04CM039 | YK_04CM039 | DQ461843 | None | | | | I13V, K14R, L19I, K20I, M36I, R41K, L63H, H69K, K70E, L89I | CRF02_AG |
| Lawrence (2006) | 03FR22 | 03FR22 | DQ251618 | None | | | | L10V, T12K, I13V, K20I, M36T, N37G, L63P, H69K, L89I, I93L | CRF02_AG |
| | 05FR24 | 05FR24 | DQ251620 | None | | | | T12A, I13A, K14R, L19F, K20I, M36I, N37D, R41K, L63P, H69K, L89I | CRF02_AG |
| Ndongmo (2006) | CM31 | CBN_CM31 | DQ394114 | None | | | V11I | I13V, K14R, K20I, M36I, R41K, L63P, H69K, K70R, I72M, L89I, I93L | CRF02_AG |
| | CM212 | CBN_CM212 | DQ394141 | None | | | | I13A, K14R, K20I, M36I, R41K, H69K, L89I, I93L | CRF02_AG |
| Razafindratsimandresy (2006) | RR_MAD-GI061 | MAD-GI061 | DQ345014 | None | | | | I13V, K14R, L19P, K20I, M36I, R41K, L63LP, H69K, K70R, L89I | CRF02_AG |
| Tatsumi (2006) | GHNJ188 | GHNJ188 | AB231896 | None | | | | I13V, K14R, L19P, K20I, M36I, R41K, H69K, K70R, L89I | CRF02_AG |
| Vidal (2006) | NV_KTB053 | 02.KTB053 | AM041052 | None | | | | I13A, L19P, K20I, M36I, R41K, H69K, L89I | CRF02_AG |
| Derache (2007) | 1226 | 1226 | EF064485 | None | | | | I13A, K14R, G16E, K20I, A22V, M36I, R41K, L63H, H69K, K70I, L89I | CRF02_AG |
| | 1237 | 1237 | EF064490 | None | | | | I13A, L19P, K20I, A22V, M36I, N37D, R41K, L63P, H69K, L89I | CRF02_AG |
| | 1252 | 1252 | EF064500 | None | | | | I13A, G16E, K20I, A22V, M36I, R41K, L63H, H69K, K70I, L89I | CRF02_AG |
| | 1268 | 1268 | EF064507 | None | | | | I13V, K20R, M36I, R41K, H69K, L89I | CRF02_AG |
| | 1278 | 1278 | EF064516 | None | | | | I13V, K14R, G16E, K20I, M36I, R41K, K43R, L63P, H69K, N83K, L89I | CRF02_AG |
| | 1310 | 1310 | EF064529 | None | | | | I13A, K14R, I15V, K20I, M36I, R41K, L63H, H69K, I72L, L89I | CRF02_AG |
| | 1323 | 1323 | EF064536 | None | | | | I13V, K14R, K20I, M36I, R41K, L63P, C67H, H69K, L89I | CRF02_AG |
| | 1325 | 1325 | EF064537 | None | | | | I13V, K14R, L19P, K20I, M36I, R41K, L63P, H69K, L89I | CRF02_AG |
| McNulty (2007) | Cam36 | Cam36PL | DQ869191 | None | | | | K20I, M36I, L38LF, R41K, E65G, H69K, I72K, L89I | CRF02_AG |
| | | Cam36DBS | DQ869190 | None | | | | K20I, A22AV, M36I, R41K, H69K, I72X, L89I | CRF02_AG |
| Sagoe (2007) | 123 | GHN123 | EF174569 | None | | | | I13A, I15IV, L19LP, K20I, A22AV, M36IT, R41K, L63P, I64IV, H69K, V77VI, L89I | CRF02_AG |
| Delgado (2008) | GH_024 | GH_024 | EU177900 | None | | | | I13V, K14R, G16E, K20I, M36I, R41K, K43R, L63S, H69K, K70R, L89I | CRF02_AG |
| | GH_084 | GH_084 | EU177948 | None | | | | I13V, K14KR, I15V, L19V, K20I, M36I, R41K, L63P, G68E, H69R, L89I | CRF02_AG |
| | GH_089 | GH_089 | EU177952 | None | | | | T12S, I13A, K14R, K20I, M36I, R41K, L63P, H69K, I72M, L89I | CRF02_AG |
| | GH_137 | GH_137 | EU177983 | None | | | V11I | I13V, L19Q, K20I, M36I, N37S, R41K, I64V, H69K, K70R, L89I | CRF02_AG |
| | GH_145 | GH_145 | EU177991 | None | | | | I13V, K14R, K20I, M36I, R41K, H69K, L89I | CRF02_AG |
| | GH_154 | GH_154 | EU177998 | None | | | | L10V, T12S, I13A, K20I, M36I, N37ND, R41K, L63P, H69K, K70KR, L89I | CRF02_AG |
| | GH_192 | GH_192 | EU178025 | None | | | | I13A, K14R, K20I, M36I, R41K, I64IV, H69K, L89I | CRF02_AG |
| | GH_194 | GH_194 | EU178027 | None | | | V11I | I13V, K14R, L19V, K20I, E35ED, M36I, R41K, L63P, H69K, K70R, L89I | CRF02_AG |
| | GH_197 | GH_197 | EU178030 | None | | | | I13AV, K14R, K20IM, M36I, R41K, L63P, H69K, L89I | CRF02_AG |
| | GH_259 | GH_259 | EU178081 | None | | | | I13A, K14N, L19I, K20I, M36I, N37ND, L63P, H69K, K70R, I72M, L89I | CRF02_AG |
| Derache (2008) | BKO-896 | BKO-896 | EU330655 | None | | | | I13A, K14R, L19P, K20I, M36I, R41K, L63P, H69K, I72M, L89I | CRF02_AG |
| | BKO-903 | BKO-903 | EU330659 | None | | | V11I | I13V, K14R, L19P, K20I, M36I, R41K, L63Y, H69K, L89I | CRF02_AG |
| | BKO-907 | BKO-907 | EU330661 | None | | | | I13A, K20I, M36I, R41K, H69K, L89I | CRF02_AG |
| | BKO-910 | BKO-910 | EU330662 | None | | | | I13A, K14R, G16E, K20V, A22V, M36I, R41K, K43R, L63S, H69K, L89I | CRF02_AG |
| | BKO-941 | BKO-941 | EU330676 | None | | | | I13V, K14R, G17E, K20I, M36I, R41K, K43R, L63P, H69K, I72L, L89I | CRF02_AG |
| | BKO-1025 | BKO-1025 | EU330716 | None | | | | T12K, I13V, K14R, G16E, L19S, K20I, M36I, R41K, L63N, I64L, H69K, L89I | CRF02_AG |
| | BKO-1059 | BKO-1059 | EU330735 | None | | | | I13V, G16E, K20I, M36I, L63T, I64M, H69K, K70Q, L89I, I93M | CRF02_AG |
| | BKO-1063 | BKO-1063 | EU330739 | None | | | | L10V, I13A, I15V, K20I, M36T, R41K, L63P, H69K, L89I | CRF02_AG |
| | SGO-45 | SGO-45 | EU330789 | None | | | | I13V, K14R, G16E, K20I, E35D, M36I, R41K, K43R, L63S, I64L, H69K, K70R, L89I | CRF02_AG |
| | SGO-51 | SGO-51 | EU330795 | None | | | | T12P, I13A, K14R, L19P, K20I, M36I, R41K, L63H, I64V, H69K, L89I | CRF02_AG |
| | SGO-81 | SGO-81 | EU330823 | None | | | | T12P, I13A, K14R, K20I, M36I, R41K, I64V, H69K, L89I | CRF02_AG |
| | SGO-90 | SGO-90 | EU330830 | None | | | | I13V, G16E, K20I, M36I, N37T, P39S, R41K, H69K, I72M, T74S, L89I | CRF02_AG |
| Holguin (2008) | SP98-364297 | SP98-364297 | EU255444 | None | | | | I13A, K14R, K20I, M36I, R41K, L63P, H69K, K70R, L89I | CRF02_AG |
| | SP17-331966 | SP17-331966 | EU342800 | None | | | | I13V, K14R, I15V, K20I, M36I, N37T, P39S, R41K, L63P, H69K, L89I | CRF02_AG |
| Sylla (2008) | B7166 | B7166_C1 | DQ991645 | None | | | | I13A, K14R, K20I, M36I, R41K, K43R, H69K, K70R, L89I | CRF02_AG |
| | | B7166_C2 | DQ991646 | None | | | | I13A, K14R, K20I, M36I, R41K, K43R, H69K, K70R, L89I | CRF02_AG |
| Aghokeng (2009) | CYM075 | CYM075 | GU191559 | None | | | | I13V, K14R, G17E, L19I, K20I, M36I, P39L, R41RK, L63P, H69K, L89I | CRF02_AG |
| | CYS050 | CYS050 | GU191568 | None | | | | T12A, I13V, K14R, G16E, K20I, E35D, M36I, R41K, H69K, V77VI, L89I | CRF02_AG |
| Ayouba (2009) | RES619 | RES619PR | GQ351717 | None | | | | I13V, K14R, K20M, M36I, R41K, H69K, L89I | CRF02_AG |
| | RES647 | RES647PR | GQ351727 | None | | | | I13V, L19P, K20I, M36I, R41K, L63P, C67Y, H69K, K70R, L89I | CRF02_AG |
| | RES231 | RES231-8PR | GQ351746 | None | | | | T12A, I13A, K14R, K20I, M36I, N37S, P39Q, R41K, L63P, H69K, L89I | CRF02_AG |
| | 0.607 | 0.607-FPR | GQ351825 | None | | | | I13V, K20I, M36I, N37S, R41K, L63P, H69K, L89I | CRF02_AG |
| | 0.637 | 0.637-PPR | GQ351837 | None | | | | I13V, K14R, K20I, M36I, R41K, L63P, H69K, L89I | CRF02_AG |
| | 0.649 | 0.649-ZPR | GQ351839 | None | | | | I13A, K20I, M36I, R41K, L63P, H69K, I72L, L89I | CRF02_AG |
| | 208 | 208-DPR | GQ351848 | None | | | | I13A, K14R, L19P, K20I, A22V, M36I, R41K, L63P, H69K, K70R, R87Q, L89I | CRF02_AG |
| | 2731 | 2731HALDPR | GQ351975 | None | | | | I13A, K20I, M36I, R41K, L63H, H69K, K70R, L89I | CRF02_AG |
| | 2885 | 2885HALDPR | GQ351983 | None | | | V11I | L10LV, T12TA, I13V, K20I, M36I, N37S, R41K, H69K, L89I | CRF02_AG |
| | 2656 | 2656HALDPR | GQ351986 | None | | | | I13V, K14R, K20I, M36I, R41K, H69K, L89I | CRF02_AG |
| | 2914 | 2914HALDPR | GQ351977 | None | | | | I13V, G16E, K20I, M36I, R41K, H69K, I72T, L89I | CRF02_AG |
| | 2879 | 2879HALDPR | GQ351963 | None | | | | I13V, K14R, G17E, K20I, M36I, L63P, H69K, L89I | CRF02_AG |
| Brown (2009) | CAS_42_1_6375 | CAS_42_1_6375 | FJ030761 | None | | | | I13V, K14R, G16E, K20M, M36I, R41K, H69K, L89I | CRF02_AG |
| Hawkins (2009) | Q236 | ZZQ236 | FJ931226 | None | | | | I13V, K20R, M36I, N37S, R41K, H69K, L89I | CRF02_AG |
| | Q142 | ZZQ142 | FJ931233 | None | | | | T12A, I13A, K14KR, I15IV, K20I, M36I, R41K, K43R, L63PS, H69K, L89I | CRF02_AG |
| | R45 | ZZR45 | FJ931271 | None | | | | I13A, K14R, G16E, K20I, M36I, P39A, R41K, I62V, L63S, H69K, K70R, L89I | CRF02_AG |
| | R118 | ZZR118 | FJ931314 | None | | | | I13A, K20I, M36I, R41K, K43R, H69K, L89I | CRF02_AG |
| | R120 | ZZR120 | FJ931316 | None | | | V11I | T12A, I13V, K14R, K20I, M36I, R41K, L63P, H69K, L89I | CRF02_AG |
| Tebit (2009) | TR101 | TR101 | FJ577284 | None | | | | I13V, K14R, G16E, K20I, M36I, R41K, H69K, L89I | CRF02_AG |
| | TR112 | TR112 | FJ577288 | None | | | G48R, I50N | I13V, K14R, K20I, M36I, R41K, R57S, Q61H, H69K, A71T, L89I | CRF02_AG |
| | TR146 | TR146 | FJ577300 | None | | | | I13V, K14R, Q18P, K20I, E21K, E35D, M36I, R41K, I62V, L63H, G68E, H69N, L89I | CRF02_AG |
| | TR165 | TR165 | FJ577314 | None | | | | I13A, K14R, K20I, M36I, R41K, L63P, H69K, K70R, I72M, L89I | CRF02_AG |
| | TR174 | TR174 | FJ577320 | None | | | | I13A, K20I, M36I, N37D, L63N, H69K, K70R, I72T, L89I | CRF02_AG |
| | TR216 | TR216 | FJ577339 | None | | | V11I | I13A, K20I, M36I, R41K, L63P, H69K, K70R, L89I | CRF02_AG |
| | TR241 | TR241 | FJ577353 | None | | | | I13V, K14R, G16E, L19P, K20I, E35D, M36I, N37S, R41K, L63H, H69K, L89I | CRF02_AG |
| Vercauteren (2009) | pt1959 | 1528967185 | GQ399065 | None | | | | L10I, I13V, K14R, K20IM, M36T, R41K, L63P, C67F, H69K, L89I | CRF02_AG |
| | pt1480 | 4401747108 | GQ399544 | None | | | V11I | T12A, I13V, K20I, M36I, R41K, H69K, I72M, L89I | CRF02_AG |
| | pt1243 | 5730141231 | GQ399781 | None | | | | I13A, K14R, K20I, M36I, R41K, K43KR, R57K, I64V, H69K, K70R, V82I, L89I | CRF02_AG |
| | pt1086 | 6685829033 | GQ399938 | None | | | | T12E, I13A, K14R, K20I, M36I, R41K, Q61QH, L63LH, I64IV, H69K, K70R, I72V, L89I | CRF02_AG |
| | pt204 | PIm10Dugrt | GQ400820 | None | | | | I13V, G17E, K20I, M36I, L63H, H69K, K70GR, L89I | CRF02_AG |
| | pt192 | puEFbes1xR | GQ400832 | None | | | | I13A, K20I, M36I, R41K, L63S, H69K, L89I | CRF02_AG |
| | pt25 | ynFkAu5OC5 | GQ400999 | None | | | | T12TP, I13V, K14KN, L19P, K20I, M36I, R41K, L63P, H69K, K70KR, L89I | CRF02_AG |
| Yaotse (2009) | HT050 | 06TG.HT050 | FM955689 | None | | | | I13A, K14R, L19S, K20I, A22V, E35D, M36I, R41K, L63H, H69K, K70R, L89I | CRF02_AG |
| | HT051 | 06TG.HT051 | FM955690 | None | | | | I13A, K14R, L19P, K20I, M36I, R41K, L63P, H69K, K70R, L89I | CRF02_AG |
| | HT064 | 06TG.HT064 | FM955699 | None | | | | I13V, K14R, L19P, K20I, M36I, R41K, L63P, H69K, L89I | CRF02_AG |
| | HT076 | 06TG.HT076 | FM955709 | None | | | | I13A, K14R, L19P, K20I, E35D, M36I, R41K, L63P, H69K, K70R, L89I | CRF02_AG |
| | HT131 | 06TG.HT131 | FM955730 | None | | | | T12A, I13V, K14R, G16E, K20I, M36I, P39S, L63S, I64M, H69K, L89I | CRF02_AG |
| | HT151 | 06TG.HT151 | FM955739 | None | | | | I13A, K14R, K20I, A22V, M36I, R41K, L63P, H69K, K70R, L89I | CRF02_AG |
| Diop-Ndiaye (2010) | 89HPD | 89HPD | FN599710 | None | | | | I13V, K14R, L19S, K20M, M36I, R41K, L63P, H69K, K70R, L89I | CRF02_AG |
| | L152 | L152 | FN599727 | None | | | | I13A, K14R, L19P, K20I, A22V, M36I, R41K, L63P, H69K, L89I | CRF02_AG |
| | 488HALD | 488HALD | FN599738 | None | | | | T12Q, I13A, K20V, A22V, M36I, R41K, L63H, H69K, L89I | CRF02_AG |
| | 483HALD | 483HALD | FN599744 | None | | | | V11M, T12A, I13V, K14R, I15V, Q18K, K20I, M36I, N37D, R41K, L63P, G68E, H69K, V82I, L89I | CRF02_AG |
| | 981hald | 981hald | FN599777 | None | | | | I13A, K20I, M36I, N37NT, R41K, K43KR, L63P, H69K, K70R, L89I | CRF02_AG |
| | 1722hald | 1722hald | FN599789 | None | | | | I13V, K14R, L19P, K20I, M36I, N37S, R41K, H69K, L89I | CRF02_AG |
| | 1727HALD | 1727HALD | FN599791 | None | | | | I13V, K14R, G17E, K20I, M36I, N37S, R41K, L63P, H69K, K70R, L89I | CRF02_AG |
| | 1737-hald | 1737-hald | FN599793 | None | | | | I13V, K14R, K20I, M36I, R41K, L63LP, H69K, L89I | CRF02_AG |
| Germanaud (2010) | 5505 | 5505 | | None | | | | I13A, K14R, K20I, M36I, R41K, L63P, H69K, K70R, L89I | CRF02_AG |
| | 5568 | 5568 | | None | | | | I13A, K14R, I15V, K20I, M36I, N37D, R41K, K43R, L63S, H69K, K70R, L89I | CRF02_AG |
| Yebra (2010) | 107620 | 03SP00107620 | FJ481699 | None | | | | I13V, K14R, K20I, M36I, R41K, L63P, H69K, K70R, L89I | CRF02_AG |
| Aghokeng (2011) | HJ1927 | HJ1927 | JN639500 | None | | | | I13AV, K14KR, K20I, M36I, R41K, L63P, H69T, K70R, L89I | CRF02_AG |
| | SK8023-PI | SK8023-PI | HQ864380 | None | | | | I13V, K14R, K20I, M36I, R41K, L63P, H69K, L89I | CRF02_AG |
| | SK4029-PI | SK4029-PI | HQ864385 | None | | | | I13V, G16E, K20I, M36I, N37ND, R41K, I62IK, L63LPS, H69K, L89I | CRF02_AG |
| | SK4075-PI | SK4075-PI | HQ864429 | None | | | | I13AV, K14KR, I15IV, K20I, M36I, R41K, L63P, H69K, A71AT, I72M, L89I | CRF02_AG |
| Aghokeng (2011) | SK6040-M24 | SK6040-M24 | HQ864464 | None | | | L33I | I13V, K14R, K20L, E35D, M36I, P39PT, R41K, L63P, H69K, K70KR, I72L, R87RG, L89I | CRF02_AG |
| Dagnra (2011) | 08TG.T3008 | 08TG.T3008 | FR715252 | None | | | | I13A, L19P, K20I, M36I, N37S, R41K, K43R, Q61H, H69K, L89I | CRF02_AG |
| | 08TG.T3017 | 08TG.T3017 | FR715254 | None | | | V11I | T12A, I13A, K14R, I15IV, G16GE, K20I, M36I, R41K, I62V, L63H, H69K, L89I | CRF02_AG |
| | 08TG.T3039 | 08TG.T3039 | FR715257 | None | | | V11I | T12A, I13V, K14R, I15V, K20I, M36I, R41K, L63P, H69K, A71AT, L89I | CRF02_AG |
| Fokam (2011) | CIRCB-10430 | CIRCB-10430 | JQ796110 | None | | | | I13A, L19LV, K20I, M36I, N37D, L63P, H69K, K70R, I72M, L89I | CRF02_AG |
| | CIRCB-3241 | CIRCB-3241 | JQ796147 | None | | | | I13V, K14R, K20R, M36I, N37D, R41K, H69K, K70R, L89I, N98K | CRF02_AG |
| | CRICB-9078 | CIRCB-9078 | JQ796157 | None | | | V11VI | L10M, I13V, K14KR, I15IV, L19P, K20I, E35D, M36I, R41K, L63LP, H69K, L89I | CRF02_AG |
| | CIRCB-10305 | CIRCB-10305 | JQ796168 | None | | | | I13V, K14R, I15IV, G16E, K20I, M36I, R41K, H69K, K70E, L89I | CRF02_AG |
| | CIRCB-10398 | CIRCB-10398 | JQ796170 | None | | | | L10I, T12A, I13V, K14R, I15V, L19LP, K20I, M36I, R41K, H69K, L89I | CRF02_AG |
| Hamers (2011) | CP076303589 | CP076303589 | HQ994053 | None | | | | T12A, I13V, K14R, G16E, K20I, E35D, M36I, N37ND, P39PS, R41K, K43R, L63H, H69K, V77VI, L89I | CRF02_AG |
| | CP076303596 | CP076303596 | HQ994060 | None | | | | I13V, K14R, L19P, K20I, M36I, P39S, R41K, H69K, K70R, L89I | CRF02_AG |
| Caron (2012) | Gab012028 | Gab012028 | HQ541877 | None | | | | I13V, K20I, M36I, R41K, L63Y, H69K, L89I | CRF02_AG |
| | Gab082254 | Gab082254 | HQ541938 | None | | | | I13V, K14R, G16E, K20I, E35D, M36I, R41K, L63H, H69K, V77I, L89I | CRF02_AG |
| | Gab011245 | Gab011245 | JN704990 | None | | | | L10I, V11T, T12A, I13V, L19I, K20I, M36I, R41K, L63P, I64V, H69K, K70R, L89I | CRF02_AG |
| Chamberland (2012) | C431S | C431S | HQ267556 | None | | | | I13V, K14R, L19P, K20IM, E35D, M36I, R41K, H69K, K70R, L89I | CRF02_AG |
| | C434S | C434S | HQ267558 | None | | | | I13A, K14R, K20I, M36I, R41K, L63H, H69K, K70R, L89I, I93IM | CRF02_AG |
| | C443S | C443S | HQ267568 | None | | | | Q7D, I13A, K20I, M36I, N37D, H69K, K70R, I72M, L89I | CRF02_AG |
| | C458S | C458S | HQ267576 | None | | | | I13A, G16E, K20I, A22V, M36I, R41K, Q61H, L63N, I64IM, E65D, H69K, K70R, L89I | CRF02_AG |
| | C483S | C483S | HQ267590 | None | | | | T12R, I13V, L19I, K20I, E35D, M36I, R41K, H69K, L89I | CRF02_AG |
| | D318T | D318T | HQ267618 | None | | | | P9X, I13A, G16E, K20I, M36I, I62V, L63S, I64M, H69K, L89I | CRF02_AG |
| | D329T | D329T | HQ267625 | None | | | | T12A, I13A, K14R, K20I, A22V, E35D, M36I, R41K, L63P, H69K, K70R, L89I, T91I | CRF02_AG |
| | D338T | D338T | HQ267632 | None | | | | I13V, K14R, K20X, M36I, R41K, K43KR, L63H, H69K, L89I | CRF02_AG |
| | D363T | D363T | HQ267652 | None | | | | I13A, K14R, K20I, M36I, N37T, R41K, D60E, L63P, H69K, L89I | CRF02_AG |
| De Gascun (2012) | IRL14981 | IRL14981 | JN622252 | None | | | V11I | I13V, K14R, K20I, M36L, N37S, R41K, L63P, H69K, L89I | CRF02_AG |
| Delwart (2012) | 480-1274-4 | 480-1274-4 | JN214953 | None | | | | L10I, I13V, L19P, K20I, M36I, N37T, L63P, I64V, H69K, L89I | CRF02_AG |
| Youngpairoj (2012) | cm1609 | cm1609 | DQ166400 | None | | | | I13V, L19P, K20I, M36I, N37D, R41K, H69K, L89I | CRF02_AG |
| | cm1bb | cm1bb | DQ166413 | None | | | | I13V, K14R, G16E, K20I, A22V, M36I, R41K, H69K, I72K, L89I | CRF02_AG |
| Frentz (2013) | EHR-19066 | EHR-19066 | JX299854 | None | | | V11I | I13V, K14R, K20I, M36L, N37S, R41K, L63P, H69K, L89I | CRF02_AG |
| | EHR-40530 | EHR-40530 | JX300224 | None | | | | T12A, I13V, K14R, G16E, K20I, E35D, M36I, R41K, L63H, H69K, K70E, V82I, L89I, T91A, I93V, L97I | CRF02_AG |
| | EHR-41925 | EHR-41925 | JX300249 | None | | | V11I | T12E, I13V, K14RS, L19LP, K20I, M36I, R41K, L63H, H69K, L89I | CRF02_AG |
| | EHR-65404 | EHR-65404 | JX300640 | None | | | | I13V, G17E, K20I, M36I, L63H, H69K, K70R, L89I | CRF02_AG |
| | EHR-77257 | EHR-77257 | JX300866 | None | | | | L10V, I13V, K14GR, G16E, K20I, M36I, R41K, L63A, H69K, K70R, L89I | CRF02_AG |
| Hawke (2013) | 22391692 | 22391692 | KC238073 | None | | | | I13A, I15IV, G17E, K20I, M36I, R41K, K43KR, Q61QHKN, L63P, H69K, K70KR, A71T, R87RG, L89I | CRF02_AG |
| | 99556553 | 99556553 | KC238299 | None | | | | I13V, K14KR, G16E, L19V, K20I, E35D, M36I, R41K, L63S, H69K, K70R, V77VI, L89I | CRF02_AG |
| Tramuto (2013) | CV1361_143 | CV1361_143 | HQ667707 | None | | | | I13V, I15L, G16E, K20I, M36I, R41K, L63Q, H69K, K70R, L89I | CRF02_AG |