| Author (yr) |
Patient |
Isolate |
Acc# |
PIs |
Wks | PIMajorDRMs |
PIMinorDRMs |
OtherMut | Subtype |
| Si-Mohamed (2000) | AS_FAN | AS_FAN | AF199275 | IDV | | I84V, L90M | L89V | L10I, I13V, L19P, K20I, M36I, N37S, R41K, L63P, H69K, K70R, A71V, I72M | CRF02_AG |
| Holguin (2001) | AH-2773 | AH-2773 | AF247037 | NFV | 32 | | V11I | T12S, I13V, L19I, K20I, A22T, M36I, R41K, H69K, L89M | CRF02_AG |
| Thomson (2001) | MT-X230 | MT-X230 | AY017453 | IDV | | I84V | | I13V, K14R, K20I, M36I, N37D, R41K, I66F, H69K, L89M | CRF02_AG |
| | MT-X98 | MT-X98 | AY017454 | IDV | | | | I13V, K20I, E35D, M36I, R41K, H69K, L89M | CRF02_AG |
| Yahi (2001) | NY_M15 | M15 | AY010377 | PI | NA | | L89V | L10V, I13V, K14R, L19P, K20I, E35N, M36I, N37D, R41K, H69K, T74S | CRF02_AG |
| | NY_M31 | M31 | AY010395 | NFV | | L90M | | I13V, K14R, I15V, K20T, E35D, M36I, R41K, K45KR, H69K, L89IM | CRF02_AG |
| | NY_M47 | M47 | AY010411 | IDV | | | | L10V, I13V, L19P, K20I, M36I, H69K, L89M | CRF02_AG |
| | NY_M65 | M65 | AY010428 | PI | NA | | L89V | L10V, I13V, K14R, L19LP, K20I, E35N, M36I, N37D, R41K, H69K, T74S | CRF02_AG |
| Gibb (2002) | DMG13 | 13_w26 | | NFV | 26 | | V11I | L10LI, I13V, I15V, K20V, M36I, N37S, R41K, H69K, L89M | CRF02_AG |
| | | 13_w35 | | NFV | 35 | | V11I | I13V, I15V, K20V, M36I, N37S, R41K, H69K, L89M | CRF02_AG |
| | DMG33 | 33_w0 | | NFV | 1 | | | I13V, I15V, K20I, E35K, M36I, R41I, K43R, L63LP, H69K, L89M | CRF02_AG |
| Holguin (2002) | AH_G4525 | AH_G4525 | AF354024 | IDV | 19 | | | I13V, K14R, K20I, E35D, M36I, R41K, H69K, K70R, L89M | CRF02_AG |
| Snoeck (2002) | BE2 | BE2 | AF338979 | IDV, SQV, RTV, NFV | 109 | V32I, I47V, G48V, I54V, V82AT | F53FL, L89V | L10V, I13V, L19IT, K20I, M36I, R41K, K55H, L63P, C67S, H69R, A71IV | CRF02_AG |
| Venturi (2002) | GV-29 | GV-29.1 | AF517281 | SQV | 134 | | V11VI | I13V, K14R, L19LP, K20I, M36I, R41K, K43R, Q61H, L63P, H69K, V82VI, L89I | CRF02_AG |
| | GV-33 | GV-33.1 | AF517285 | SQV, RTV | 74 | | | I13V, K20R, E35D, M36I, N37D, R41K, H69K, L89M | CRF02_AG |
| | GV-56 | GV-56.1 | AF517308 | IDV | 107 | | F53FL, L89MV | I13V, K14KR, K20R, E35D, M36I, N37D, R41K, H69K | CRF02_AG |
| Holguin (2003) | SP_LP13 | SP_LP13 | AF455611 | PI | NA | | | L19P, K20I, M36I, N37T, R41K, K43R, H69K, K70R, L89M | CRF02_AG |
| | SP_LP15 | SP_LP15 | AF455612 | PI | NA | | | I13S, K14R, I15N, G16E, K20I, M36I, R41K, K43R, H69K, K70R, L89M | CRF02_AG |
| | SP_LP3 | SP_LP3 | AF455603 | PI | NA | M46L | | I13V, K14G, I15V, K20I, M36I, R41K, I64M, H69K, L89M | CRF02_AG |
| | SP_LP38 | SP_LP38 | AF455630 | PI | NA | | | I13A, K20I, M36I, N37S, R41K, H69K, L89M | CRF02_AG |
| | SP_LP6 | SP_LP6 | AF455605 | PI | NA | | | I13V, K14R, K20I, M36I, N37S, R41K, H69K, K70R, L89M | CRF02_AG |
| Vergne (2003) | VL98SN46HALD | 98SN46 | AJ583719 | IDV | | | | I13V, K14R, G17E, K20I, M36I, N37S, R41K, I64M, H69K, L89M | CRF02_AG |
| | | 00SN46 | AJ583747 | IDV | | | | I13V, K14R, G17E, K20I, M36I, R41K, I64M, H69K, L89M | CRF02_AG |
| | VL98SN65HALD | 00SN65 | AJ583751 | IDV | | | L89V | L10V, I13V, L19P, K20I, M36I, R41K, H69K, K70R | CRF02_AG |
| | VL98SN34hald | 98SN34 | AJ583718 | IDV | | | | I13V, I15L, K20I, M36I, R41K, I64M, H69K, L89M | CRF02_AG |
| | | 01SN34 | AJ583745 | IDV | | | | I13V, I15L, K20I, M36I, R41K, I64M, H69K, L89M | CRF02_AG |
| Montes (2004) | MB_patSCHE | 02_SCHE715 | AJ578156 | IDV | 60 | | | L10V, I13V, G16E, K20I, M36I, R41K, L63H, H69K, K70R, I72V, L89M, I93L | CRF02_AG |
| | MB_patTAF | 02_TAF703 | AJ578163 | Unknown, NFV | >36 | M46I | | I13V, G16E, K20I, E35D, M36I, R41K, I64M, H69K, I72V, L89T | CRF02_AG |
| | MB_patROD | 00_ROD734 | AJ577982 | IDV | 82 | | | T12A, I13V, K20I, M36I, R41K, L63P | CRF02_AG |
| | MB_patALC | 02_ALC723 | AJ577727 | NFV, SQV, RTV | 91 | I84V, L90M | | L10I, I13V, K20I, E35D, M36I, R41K, K43R, L63P, H69K, A71V, L89I | CRF02_AG |
| | MB_patKES | 01_KES716 | AJ577920 | NFV | 136 | M46I, L90M | L89V | L10V, I13V, K14R, G16E, K20I, E35D, M36I, R41K, H69K, K70R, T74S, V75I | CRF02_AG |
| | MB_patALI | 01_ALI708 | AJ577728 | NFV | 14 | | | T12E, I13V, K14R, G17E, K20I, M36I, L63P, I64L, H69K, L89M | CRF02_AG |
| | | 02_ALI705 | AJ577729 | NFV | 16 | | | T12E, I13V, K14R, G17E, K20I, M36I, L63P, I64L, H69K, L89M | CRF02_AG |
| | MB_patFEU | 02_FEU726 | AJ577889 | IDV, SQV, RTV | 190 | I84V | | L10V, I13V, K14R, L19P, K20I, E21D, L33V, M36I, N37D, R41K, F53Y, I64L, H69K, K70R, T74S, L89M | CRF02_AG |
| | MB_patSER | 00_SER718 | AJ578159 | SQV, NFV | 43 | | | I13V, K14R, I15V, K20I, M36I, R41K, H69K, L89M | CRF02_AG |
| | MB_patGONO | 00_GONO705 | AJ577902 | NFV | 66 | | | I13A, K14R, K20I, M36I, R41K, H69K, L89M | CRF02_AG |
| | MB_patKON | 00_KON723 | AJ577921 | IDV, NFV | 117 | I54V | | L10V, I13V, K14R, K20I, E35G, M36I, R41K, I64M, H69K, A71V, L89I | CRF02_AG |
| Non-B Workgroup (2005) | PL35085 | 57393 | AY900720 | IDV | 47 | M46MI, I84V | L89V | I13AV, K14R, K20I, M36I, R41K, I66F, H69K, A71AT | CRF02_AG |
| | PL16925 | 58358 | AY900968 | NFV | | M46I, L90M | L89V | L10V, I13V, K20V, M36I, R41K, L63P, H69K, K70R | CRF02_AG |
| | | 71340 | | NFV, Unknown | NA | M46I, I84V, L90M | L33LI, L89V | L10V, I13A, K14KR, K20IV, A22AV, E35EG, M36I, R41RK, K55KR, L63P, I66FV, H69K, K70R, P79PA | CRF02_AG |
| | PL35608 | 58508 | AY900971 | IDV, NFV | | M46I, I54V, V82A, L90M | | I13V, K14KR, I15V, L19V, K20I, E35D, M36I, I64M, H69K, L89M | CRF02_AG |
| | PL35159 | 57564 | AY901074 | IDV, NFV | 160 | M46I, I54V, I84IV, L90M | L89V | I13V, K14R, I15V, K20I, E35D, M36I, R41K, H69K, A71T | CRF02_AG |
| | PL7434 | 61838 | AY901078 | SQV, ATV | | | T74P | I13V, I15V, K20I, M36I, R41K, I64M, H69K, K70R, L89M | CRF02_AG |
| | PL37806 | 63403 | AY901079 | SQV | | | | L10V, I13V, K14R, G16E, K20I, E35D, M36I, R41K, H69K, V77VI, L89M | CRF02_AG |
| | PL38923 | 65841 | AY901082 | SQV, ATV | | M46I | | I13V, E35N, M36I, N37D, I64M, H69K, T74S, L89T | CRF02_AG |
| | PL35685 | 67040 | AY901084 | NFV | 21 | M46ML, I54IV, L90M | L89MV | I13AV, K14R, K20I, E35D, M36I, N37ND, R41K, I64X, H69K, A71AV, T74TS | CRF02_AG |
| | PL28285 | 67988 | AY901085 | IDV, ATV | | I84V, L90M | L33LF, L89V | L10V, I13V, K14R, G16E, K20IM, E35EG, M36I, R41K, Q61H, C67Y, G68D, H69K, A71T, I72R | CRF02_AG |
| | | 65163 | | IDV, ATV, Unknown | NA | V82VA, I84IV, L90M | L33F, K43KT, L89V | L10V, I13V, K14R, G16E, K20IM, E35G, M36I, R41K, Q61H, C67Y, G68GE, H69Q, I72R | CRF02_AG |
| | PL40184 | 68632 | AY901088 | ATV | 22 | | | L10IV, T12I, I13V, K14R, G16E, E35D, M36I, R41K, R57RK, H69K, L89M | CRF02_AG |
| | PL36922 | 69089 | AY901091 | NFV | 87 | L90M | | L10V, T12S, I13V, K14R, G16E, K20I, E35G, M36I, P39S, R41K, I62IV, I66F, H69K, K70R, L89M | CRF02_AG |
| | IL32 | IL32b | | NFV | 22 | M46I, N88S | L10LF | I13V, K20I, M36I, P39L, R41K, I62V, L63P, H69K, L89M | CRF02_AG |
| | | IL32c | AY901181 | NFV | 67 | M46I, N88S | | L10V, I13V, K20I, M36I, P39L, R41K, I62V, L63P, H69K, L89M | CRF02_AG |
| | TK1006 | TK1006 | | IDV, NFV, RTV | 104 | | | I13V, K20I, M36I, R41K, I64IM, H69K, K70KR, L89M | CRF02_AG |
| | | TK1006a | | IDV, NFV, RTV, LPV | 177 | | | I13V, K20I, M36I, R41K, I64IM, H69K, K70R, L89M | CRF02_AG |
| | | TK1006b | | IDV, NFV, RTV, LPV | 181 | | | I13V, K20I, M36I, R41K, I64IM, H69K, K70R, L89M | CRF02_AG |
| | | TK1006c | | IDV, NFV, RTV, LPV | 258 | | L10LF | I13V, K20I, M36I, N37NY, R41K, K43KR, I64IM, H69K, K70KR, L89M | CRF02_AG |
| | TK2008 | TK2008 | | RTV, IDV, NFV | 73 | | | L10I, I13V, K20I, M36I, R41K, L63P, C67S, H69K, K70R, L89M | CRF02_AG |
| | TK2019 | TK2019 | | NFV, SQV, RTV | 107 | | | I13V, K20I, M36I, N37DE, R41K, H69K, K70R, T74S, L89M | CRF02_AG |
| | | TK2019a | | NFV, SQV, RTV | 108 | | | I13V, K20I, M36I, N37D, R41K, H69K, K70R, T74S, L89M | CRF02_AG |
| | TK3002 | TK3002 | | SQV, RTV | 105 | | | L10I, I13V, L19P, K20I, M36I, R41K, H69K, K70R, L89M | CRF02_AG |
| | | TK3002a | | SQV, RTV, IDV | 207 | | | L10I, I13V, L19P, K20I, E35ED, M36I, R41K, H69K, K70R, L89M | CRF02_AG |
| | | TK3002b | | SQV, RTV, IDV | 213 | | | L10IV, I13V, L19P, K20I, E35ED, M36I, R41K, L63LP, H69K, K70KR, L89M | CRF02_AG |
| | TK3034 | TK3034 | | IDV, NFV | 191 | | | I13V, K14R, G16E, K20I, M36I, R41K, L63GV, I64M, H69K, L89M | CRF02_AG |
| | TK4015 | TK4015 | | NFV | 32 | M46ML | | I13V, K14R, G17E, K20I, E35K, M36I, R41K, I66IF, H69K, L89M | CRF02_AG |
| | PL31915 | 79867 | | IDV, RTV | 155 | | V11VI | P1PS, L10V, I13V, K14R, G16E, K20I, M36I, R41K, I64IV, H69K, K70R, I72V, L89M | CRF02_AG |
| | | 95985 | | IDV, RTV | 206 | | V11VI | L10V, I13V, K14R, G16E, L19LP, K20I, M36I, R41K, H69K, K70R, I72V, L89M | CRF02_AG |
| | PL3275 | 91552 | | SQV | 282 | I54IV | | L10IV, I13V, K20I, M36I, R41K, H69K, T74S, V75I, L89M | CRF02_AG |
| | | 105576 | | SQV | 282 | | | L10V, I13V, K20I, M36I, R41K, H69K, T74S, V75I, L89M | CRF02_AG |
| | PL35047 | 57302 | | IDV | 191 | | L89MV | I13V, K14KR, K20I, M36I, N37E, R41K, L63LP, I64IM, H69K, K70R | CRF02_AG |
| | | 97181 | | IDV, NFV | 337 | M46I, L90M | L89V | L10V, I13V, K14KR, L19LP, K20I, E35G, M36I, N37E, R41K, I62V, H69K, K70R, T74S | CRF02_AG |
| | PL3890 | 100322 | | NFV | 61 | L90M | | I13V, K14R, G16E, K20IV, E35A, M36I, P39PS, R41K, H69K, L89I | CRF02_AG |
| | PL46148 | 82690 | | IDV | 65 | | | I13V, K14KT, G16E, K20I, M36I, N37D, R41K, H69K, K70R, I72IV, L89M | CRF02_AG |
| | PL53161 | 101108 | | NFV | 52 | I54V, L90M | | I13V, G16E, K20I, E35D, M36I, R41K, I66F, H69K, K70R, L89M | CRF02_AG |
| | PL53865 | 102930 | | IDV | 226 | | | L10V, I13V, K14R, G16E, L19P, K20V, M36I, R41K, H69K, L89M | CRF02_AG |
| | PL55983 | 108809 | | RTV, IDV | 26 | | | I13V, K14R, G16E, K20I, M36I, R41K, H69K, K70R, I72C, L89M | CRF02_AG |
| Weber (2005) | F65163 | F65163 | AY677476 | SQV, RTV | 117 | | | I13V, K14R, G17GE, K20I, M36I, R41K, H69K, L89IM | CRF02_AG |
| | 01M6122 | 01M6122 | AY677413 | NFV | 224 | N88S | L10F | I13V, K20I, E35D, M36I, R41K, H69K, L89M | CRF02_AG |
| | 3023939 | 3023939 | AY677492 | APV, LPV | 239 | M46I, L76V, V82F, I84C | | L10I, I13V, G16E, K20I, E35D, M36I, N37NK, R41K, L63M, H69K, K70R, T74S, L89M | CRF02_AG |
| | M86254 | M86254 | AY714445 | LPV, NFV | 143 | N88NS | | L10LV, I13V, K14N, K20I, L33LV, M36I, N37ND, L63P, I66IF, H69K, K70KR, A71AT, T74TS, L89IM | CRF02_AG |
| | F83557 | F83557 | AY714459 | NFV | 30 | | L33F | M36I, P39V, R41K, H69Q, L89M | CRF02_AG |
| Baxter (2006) | 12-3197 | 3197-30821 | DQ876738 | PI | NA | I54V, V82A | L89V | L10V, I13A, K14R, K20I, A22V, M36I, R41K, I62V, H69K, G73D, T74S, T91TS | CRF02_AG |
| | | 3197-40128 | DQ876116 | PI, RTV, TPV | >23 | I54V, V82A | L89V | L10V, I13A, K14R, K20I, A22V, L33L_L, M36I, R41K, I62V, H69K, G73D, T74S, T91TS | CRF02_AG |
| | 48-1226 | 1226-30417 | DQ877758 | PI | NA | M46I, I47V, L76V, I84A | V11I, G73S, L89V | L10M, I13V, K14R, I15V, Q18I, K20I, M36I, N37D, R41K, H69K, A71V, T74S | CRF02_AG |
| | 48-3036 | 3036-30310 | DQ877947 | PI | NA | M46L, I54V, I84V, L90M | L33I, L89V | L10I, T12A, I13A, L19P, K20V, A22V, M36I, R41K, I66F, H69K, K70R, A71V, Q92K | CRF02_AG |
| | 48-3090 | 3090-30925 | DQ877999 | PI | NA | M46I, I47V, I54V, V82C, I84V | V11I, L33I, K43T, F53FL | L10I, T12M, I13V, K14R, L19P, K20I, A22V, M36I, R41K, K55R, H69K, K70R, I72V, T74S, L89I, T91S | CRF02_AG |
| | 48-3119 | 3119-30326 | DQ878027 | PI | NA | | | I13V, K20I, M36I, R41K, I64L, H69K, L89M | CRF02_AG |
| | 48-3224 | 3224-30624 | DQ878131 | PI | NA | M46I, I47IV, L76V, I84V | L33LI, Q58E | L10I, I13A, K20I, A22V, M36I, R41K, L63P, I66F, H69K, K70R, L89I, T91S | CRF02_AG |
| | 48-3283 | 3283-30916 | DQ878190 | PI | NA | M46I, I54M, L76V, I84V | G73A, L89V | L10I, I13A, K14KR, L19LI, K20I, L33V, M36I, R41K, K55R, R57RK, D60E, L63P, I66F, H69K | CRF02_AG |
| | 48-4081 | 4081-30228 | DQ878310 | PI | NA | M46L, I54V, I84V | | L10V, I13A, K14R, K20I, A22V, E35D, M36I, N37S, R41K, Q61H, I66F, H69K, K70R, P79S, L89I, T91TS | CRF02_AG |
| | 48-4167 | 4167-30423 | DQ878400 | PI | NA | M46L, I54V, I84V | | L10I, I13A, L19P, K20I, A22V, E35D, M36I, N37S, R41K, D60E, I66F, H69K, A71V, L89I, T91S, Q92K | CRF02_AG |
| | | 4167-40203 | DQ878401 | PI, RTV, TPV | >41 | M46L, I54V, I84V | | L10I, I13A, A22V, E35D, M36I, N37S, R41K, D60E, I66F, H69K, A71V, L89I, T91S, Q92K | CRF02_AG |
| | 48-4221 | 4221-30429 | DQ878456 | PI | NA | M46I, I84V | L10F, L33I, G73S | I13V, K14R, K20I, E21ED, A22V, M36I, N37D, R41K, L63LP, H69K, K70R, A71V, L89T | CRF02_AG |
| | 48-5075 | 5075-30807 | DQ878585 | PI | NA | M46L, G48T, I54V, V82A, I84V | V11VIL | L10I, T12TS, I13V, K14R, L19P, K20I, E35D, M36I, N37NS, R41K, Q61H, H69K, T74S, L89I, T91S | CRF02_AG |
| | 48-7124 | 7124-30902 | DQ878967 | PI | NA | M46I, I47V, L76V, I84V | Q58E | L10I, I13A, K14IR, L19P, K20I, M36I, N37D, R41K, K55KR, L63P, H69K, K70R, L89I | CRF02_AG |
| Laurent (2006) | CK2-47 | 02CM-47 | AM279442 | IDV | 43 | | | T12K, I13A, K14R, K20I, M36I, R41K, H69K, L89M | CRF02_AG |
| | CK2-59 | 02CM-59 | AM279443 | IDV | 61 | | | I13V, K14R, I15V, K20I, M36I, R41K, L63P, H69K, L89M | CRF02_AG |
| | CK22-25 | 02CM2-25 | AM279453 | IDV | 39 | | L89AMTV | I13V, K14R, K20I, M36I, R41K, H69K, I72V | CRF02_AG |
| | CK22-31 | 03CM2-31 | AM279454 | IDV | 35 | | | L10IV, I13V, K14R, L19P, K20I, M36I, R41K, H69K, L89M | CRF02_AG |
| | CK22-33 | 03CM2-33 | AM279455 | IDV | 78 | | | I13V, K20I, M36I, R41K, H69K, L89M | CRF02_AG |
| | CK22-47A | 03CM2-47 | AM279457 | IDV | 98 | | | I13V, K14R, K20I, M36I, N37D, R41K, H69K, L89M | CRF02_AG |
| | CK22-75 | 03CM2-75 | AM279460 | IDV | 63 | | | L10I, I13V, K14R, L19P, K20I, M36I, R41K, L63S, L89M | CRF02_AG |
| Seyler (2007) | 003 | CS_003 | | IDV | 232 | | | I13V, K20R, M36I, N37D, R41K, L63LP, H69K, K70R, L89M | CRF02_AG |
| | 004 | CS_004 | | NFV, IDV | 196 | | | L10V, I13V, K14R, G16E, K20I, M36I, R41K, H69K, K70R, L89M | CRF02_AG |
| | 006 | CS_006 | | NFV, IDV | 204 | | G73GS | L10LV, I13V, K14R, I15V, K20I, E35DN, M36I, N37ND, R41RK, I64IM, H69K, A71AV, L89MT | CRF02_AG |
| | 027 | CS_027 | | NFV | 165 | | | L10LV, I13V, K20I, M36I, R41K, I64V, H69K, T74S, L89M, I93M | CRF02_AG |
| | 065 | CS_065 | | NFV | 167 | | | L10LV, I13V, K14R, K20I, M36I, R41K, K43KR, L63S, I64M, H69K, A71AV, I72T, L89M | CRF02_AG |
| | 145 | CS_145 | | IDV | 101 | L90LM | | I13V, K14R, G16E, K20I, E35D, M36I, R41K, H69K, K70KR, L89M | CRF02_AG |
| | 164 | CS_164 | | IDV | 253 | | | I13V, K20I, E35N, M36I, N37D, L63V, I64M, H69K, L89M | CRF02_AG |
| | 179 | CS_179 | | IDV | 119 | | V11I | L10I, I13V, G16E, K20I, M36I, N37ND, R41K, L63T, H69K, K70KR, A71T, L89M, I93L | CRF02_AG |
| | 195 | CS_195 | | IDV | 111 | | | L10V, I13V, K14R, G16E, K20I, E35D, M36I, R41K, I62IV, H69K, K70KR, T74TS, L89M | CRF02_AG |
| | 197 | CS_197 | | IDV | 163 | | | I13V, L19P, K20I, M36I, N37D, R41RK, H69K, L89M | CRF02_AG |
| | 205 | CS_205 | | IDV | 209 | | L89MV | I13V, K14R, G16E, K20I, E35D, M36I, R41K, I64M, H69K, K70KR | CRF02_AG |
| | 239 | CS_239 | | IDV | 71 | | | I13AV, K14R, K20I, M36I, R41K, L63P, H69K, L89M | CRF02_AG |
| | 282 | CS_282 | | NFV, IDV | 150 | L90M | L89V | L10V, T12TK, I13V, L19P, K20I, E35G, M36I, N37ND, Y59YC, L63P, E65EK, H69K, K70R, A71T | CRF02_AG |
| | 292 | CS_292 | | IDV | 101 | | L33I | L10V, T12A, I13V, K14KR, G16E, K20R, M36I, R41K, L63T, H69K, K70R, L89M | CRF02_AG |
| | 405 | CS_405 | | NFV | 167 | | | I13V, K14R, G16E, K20I, E35D, M36I, N37D, R41K, I64M, H69K, K70R, L89M | CRF02_AG |
| | 474 | CS_474 | | NFV, IDV | 177 | | V11VI | L10V, T12PQ, I13V, K14IR, I15IV, G16E, L19P, K20I, M36I, R41K, K43KR, L63LH, H69K, K70KR, I72IT, L89M | CRF02_AG |
| | 501 | CS_501 | | IDV | 161 | | | I13V, K14R, G16E, K20I, M36I, N37T, R41K, H69K, L89M | CRF02_AG |
| | 518 | CS_518 | | IDV | 163 | | V11VI | I13V, K14R, K20I, M36I, R41K, L63S, H69K, V82I, L89M | CRF02_AG |
| | 522 | CS_522 | | NFV | 102 | | | I13V, K14R, G16E, K20I, M36I, R41K, H69K, L89M | CRF02_AG |
| | 527 | CS_527 | | NFV, IDV | 176 | | | I13V, K14R, L19P, K20I, M36I, R41K, L63LP, H69K, L89M | CRF02_AG |
| | 545 | CS_545 | | IDV | 170 | I84V | L33I, L89V | L10I, I13V, K14R, L19P, K20I, A22V, M36I, N37D, L38I, R41K, L63P, H69K, A71V, T74S | CRF02_AG |
| | 580 | CS_580 | | NFV | 142 | | | I13V, G16E, K20I, M36I, P39PS, R41K, H69K, K70KR, T74A, V77VI, L89M | CRF02_AG |
| | 619 | CS_619 | | IDV | 104 | | | I13V, K14R, K20I, M36I, R41K, H69K, L89M | CRF02_AG |
| | 643 | CS_643 | | NFV | 120 | | | I13V, K20I, M36I, N37D, R41K, H69K, L89M | CRF02_AG |
| von Wyl (2007) | 110 | 5247133 | EF449805 | PI | NA | N88S | | L10I, I13V, K14R, G16E, K20I, E35Q, M36I, R41K, R57K, H69K, T74S, L89M | CRF02_AG |
| | 120 | 5327019 | EF449829 | PI | NA | L90M | | L10V, I13V, K14R, I15V, K20I, E35G, M36I, R41K, L63P, G68E, H69R, A71T, L89I | CRF02_AG |
| | 105 | 697505 | EF449819 | PI | NA | | | L10I, I13V, L19P, K20I, M36I, R41K, I64IV, H69K, K70R, L89M | CRF02_AG |
| | 29 | 1845355 | EF449895 | PI | NA | L90M | | I13V, K14R, L19P, K20I, M36I, R41K, H69K, L89I | CRF02_AG |
| | 112 | 1435894 | EF449908 | PI | NA | M46L, N88S | | I13V, K14R, K20I, E35G, M36I, N37D, R41K, H69K, V77I, L89M | CRF02_AG |
| | 15 | 496611 | EF449962 | PI | NA | | V11VI | L10I, I13V, K14KR, I15V, L19P, K20I, E21ED, M36I, N37D, R41K, H69Q, K70R, L89M | CRF02_AG |
| | 160 | 1476423 | EF449906 | RTV, PI | NA | | | I13V, G16E, K20I, M36I, R41K, I64M, H69K, K70R, L89M | CRF02_AG |
| Riddler (2008) | RG18536 | RG18536w52 | | LPV | 52 | | | I13AV, K14R, K20I, M36I, L38LF, R41K, L63H, H69K, R87RG, L89M | CRF02_AG |
| | RG3642 | RG3642w41 | | LPV | 37 | | | I13V, I15L, K20I, M36I, R41K, H69K, L89M | CRF02_AG |
| | RG60650 | RG60650w114 | | LPV | 114 | | | I13V, G17E, K20I, E35K, M36I, R41K, L63P, H69K, L89M | CRF02_AG |
| | | RG60650w137 | | LPV | 137 | | | Q2P, I13V, K14R, G17E, K20I, E35K, M36I, R41K, H69K, L89M | CRF02_AG |
| Rosen-Zvi (2008) | 1 | 04p1-2 | | LPV | 85 | V82A | N83D | L10V, I13V, K14R, K20R, M36I, N37D, R41K, Q61H, H69K, K70R, L89I | CRF02_AG |
| | | 05p1-3 | | LPV, RTV, FPV | 140 | M46I, V82A, I84V | N83D | L10V, I13V, K14R, K20R, A22V, M36I, N37D, R41K, Q61H, H69K, K70R, L89I | CRF02_AG |
| | 45 | 04p45-2 | | LPV | 5 | | | I13V, K14R, K20I, M36I, R41K, H69K, K70KR, L89M | CRF02_AG |
| | | 06p45-3 | | LPV | 109 | | | I13V, K14R, K20I, E35D, M36I, R41K, H69K, L89M | CRF02_AG |
| | | 07p45-4 | | LPV | 109 | | | I13V, K14R, K20I, E35ED, M36I, R41K, H69K, L89M | CRF02_AG |
| | 46 | 00p46-1 | | RTV, SQV, NFV, APV | 141 | M46MIL, I54V, V82M, I84V, L90M | L33F, Q58E | L10V, T12V, I13IV, K14KR, I15V, K20R, E35D, M36I, N37E, R41K, R57K, L63P, H69K, L89I | CRF02_AG |
| Sylla (2008) | a2521 | a2521_c1 | DQ991625 | IDV | | | | I13V, K14R, G16E, K20I, M36I, R41K, L63H, H69K, L89M | CRF02_AG |
| | | a2521_c2 | DQ991626 | IDV | | | | I13V, K14R, G16E, K20I, M36I, R41K, L63H, H69K, L89M | CRF02_AG |
| | A2840 | A2840_C1 | DQ991637 | IDV | | | | T12A, I13V, K14R, K20I, M36I, R41K, L63P, H69K, L89M | CRF02_AG |
| | | A2840_C2 | DQ991638 | IDV | | | | T12A, I13V, K14R, K20I, M36I, R41K, L63P, H69K, L89M | CRF02_AG |
| | A4197 | A4197_C1 | DQ991639 | IDV | | | | I13V, G16E, K20I, M36I, P39L, L63S, H69K, L89I | CRF02_AG |
| | | A4197_C2 | DQ991640 | IDV | | | | L10V, I13V, G16E, K20I, M36I, P39L, L63S, H69K, L89I | CRF02_AG |
| | B7127 | B7127_C1 | DQ991643 | IDV | | | | I13V, G17E, K20I, E35N, M36I, R41K, K45R, R57K, L63S, H69K, K70R, I72T, L89M | CRF02_AG |
| | | B7127_C2 | DQ991644 | IDV | | | | I13V, G17E, K20I, E35N, M36I, R41K, K45R, R57K, L63S, H69K, K70R, I72T, L89M | CRF02_AG |
| | A1097 | A1097_C1 | EF525653 | IDV | | | | I13V, K14R, K20I, M36I, R41K, I64M, H69K, L89M | CRF02_AG |
| | | A1097_C2 | EF525654 | IDV | | | | I13V, K14R, K20I, M36I, R41K, I64M, H69K, L89M | CRF02_AG |
| | B7156 | B7156_C1 | EF525659 | IDV | | | | I13V, K14R, I15IV, K20I, M36I, N37ND, R41K, I64M, H69K, K70R, L89M | CRF02_AG |
| Koyalta (2009) | 78 | TCHAD-78 | FJ688207 | IDV | 26 | | | L10I, T12K, I13V, K14R, G16E, L19P, K20V, E35D, M36I, R41S, C67Y, H69K, L89M | CRF02_AG |
| Knops (2010) | ID0462 | ID0462-GT1 | GU271156 | LPV | | | | L10LV, T12TK, I13V, K14R, G16GE, L19I, K20I, M36I, R41K, H69K, K70KR, I72IV, L89M | CRF02_AG |
| | | ID0462-GT2 | GU271157 | LPV | 105 | M46I, L76V | | L10V, T12K, I13V, K14R, G16E, L19I, K20I, M36I, R41K, H69K, L89M | CRF02_AG |
| Charpentier (2011) | 2 | CP 001-032 | | Unknown, LPV | NA | | L89V | L10V, I13V, I15V, L19KR, K20I, E35G, M36I, N37ND, R41K, I62IV, L63P, H69K, K70N, A71T, T74TS | CRF02_AG |
| Barber (2012) | 60783 | 60783 | JQ361670 | LPV | | M46I, I84V | | L10I, I13V, G16E, Q18QK, L19LP, K20I, E35D, M36I, N37T, P39S, R41K, I62V, H69K, K70R, T74A, L89M | CRF02_AG |
| | 48702 | 48702 | JQ361678 | LPV | | I54IV | | I13V, I15L, L19I, K20I, M36I, N37S, R41K, H69K, L89M | CRF02_AG |
| | 66051 | 66051 | JQ361680 | LPV | | I54V, V82A | | I13V, K14R, K20I, M36I, R41K, I64L, H69K, K70R, L89M | CRF02_AG |