| Author (yr) |
Patient |
Isolate |
Acc# |
PIs |
Wks | PIMajorDRMs |
PIMinorDRMs |
OtherMut | Subtype |
| Howard (1996) | IBNG | IBNG | L39106 | None | | | | I13V, K14R, G16E, K20I, E35D, M36I, R41K, H69K, L89M | CRF02_AG |
| Cornelissen (2000) | MC93GH05 | MC93GH05 | AF212277 | None | | | | I13V, G16E, K20R, E35D, M36I, N37D, G40X, R41K, L63V, G68E, H69K, K70R, L89I, T91V, I93L | CRF02_AG |
| Holguin (2000) | AH-HC15 | HolgHC15 | AF125295 | None | | | | I13V, K14R, K20I, E35D, M36I, R41K, I66F, C67G, H69K, L89M | CRF02_AG |
| Si-Mohamed (2000) | AS_NZI | AS_NZI | AF199280 | None | | | | I13V, L19F, E35D, M36I, R41K, L63P, H69K, K70R, V77I, L89M | CRF02_AG |
| Tscherning-Casper (2000) | 1744Pol | 1744Pol | AF268326 | None | | | | I13V, K14R, K20I, E35D, M36I, N37S, R41K, H69K, L89M | CRF02_AG |
| | 1525Pol | 1525Pol | AF268325 | None | | | | I13V, K14R, G16E, K20I, E35D, M36I, R41K, H69K, L89M | CRF02_AG |
| Vergne (2000) | LVMP636 | LVMP636 | AJ286942 | None | | | | I13V, K14R, K20I, E35D, M36I, R41K, H69K, L89M | CRF02_AG |
| | LVMP1026 | LVMP1026 | AJ286953 | None | | | | I13V, K20I, E35D, M36I, R41K, L63P, H69K, L89M | CRF02_AG |
| | LVMP1027 | LVMP1027 | AJ286954 | None | | | | L10V, I13V, K14R, G16E, K20I, E35D, M36I, R41K, R57K, H69K, K70R, T74S, L89M | CRF02_AG |
| | LVMP1093 | LVMP1093 | AJ286961 | None | | | | I13V, K14R, G16E, K20I, E35D, M36I, R41K, H69K, L89M | CRF02_AG |
| | LV26HALD | LV26HALD | AJ286987 | None | | | | I13V, K14R, I15V, K20I, E35D, M36I, R41K, H69K, V77I, L89M | CRF02_AG |
| | LV41HPD | LV41HPD | AJ286991 | None | | | | I13V, G16E, K20I, E35D, M36I, R41K, H69K, K70R, L89M | CRF02_AG |
| | LV57HALD | LV57HALD | AJ286998 | None | | | V11I | L10V, I13V, K14R, G16E, K20I, E35D, M36I, R41K, H69K, K70R, L89M | CRF02_AG |
| | LVMBFE155 | LVMBFE155 | AJ287016 | None | | | | I13V, K20I, E35D, M36I, R41K, I64L, H69K, K70R, L89M | CRF02_AG |
| | LVMBFE244 | LVMBFE244 | AJ287018 | None | | | | I13V, K14R, G16E, K20I, E35D, M36I, R41K, I64M, H69K, L89M | CRF02_AG |
| | LVMB92 | LVMBP2 | AJ287024 | None | | | | I13A, K14R, K20I, E35D, M36I, N37D, R41K, K43R, H69K, K70R, L89M | CRF02_AG |
| | LVMP1262 | LVMP1262 | AJ287034 | None | | | | I13V, K14R, G16E, K20I, E35D, M36I, R41K, I64M, H69K, K70R, L89M | CRF02_AG |
| Carr (2001) | CM53658 | CM53658 | AF377955 | None | | | | T4S, I13V, K14R, G16E, K20I, E35D, M36I, N37D, H69K, L89M | CRF02_AG |
| Eshleman (2001) | SE843 | SE843 | AF388131 | None | | | | I13V, K14R, E35D, M36I, R41K, R57K, H69K, L89M | CRF02_AG |
| | SE479 | SE479 | AF388086 | None | | | | I13V, K14R, E35D, M36I, R41K, R57K, L63LV, H69K, L89M | CRF02_AG |
| | SE151 | SE151 | AF388069 | None | | | | I13V, E35D, M36I, R41RK, R57K, H69K, V77I, L89M | CRF02_AG |
| Dowling (2002) | KER2021 | KER2021 | AF457058 | None | | | | L10V, I13V, I15V, E35D, M36I, R41K, D60E, Q61D, H69K, L89M | CRF02_AG |
| Fonjungo (2002) | CM98 | CM98 | AY051279 | None | | | | I13V, K14R, L19P, K20I, E35D, M36I, R41K, H69K, L89M, I93L | CRF02_AG |
| | CM263 | CM263 | AY051271 | None | | | | I13V, G16E, K20I, E35D, M36I, R41K, H69K, K70R, L89M, I93L | CRF02_AG |
| | CM233 | CM233 | AY051266 | None | | | | I13V, K14R, G16E, K20I, E35D, M36I, R41K, K43R, L63P, H69K, L89M, I93L | CRF02_AG |
| | CM232 | CM232 | AY051265 | None | | | | I13V, K20I, E35D, M36I, R41K, I64M, H69K, V77I, L89M, I93L | CRF02_AG |
| | CM229 | CM229 | AY051264 | None | | | | I13V, K14R, K20I, E35D, M36I, N37D, R41K, H69K, L89M, I93L | CRF02_AG |
| | CM228 | CM228 | AY051263 | None | | | | T12K, I13V, G16E, K20I, E35D, M36I, N37T, R41K, L63P, H69K, K70R, L89M, I93L | CRF02_AG |
| | CM21 | CM21 | AY051259 | None | | | | I13V, K14R, G16E, K20I, E35D, M36I, R41K, H69K, L89M, I93L | CRF02_AG |
| | CM188 | CM188 | AY051256 | None | | | | I13V, K20I, E35D, M36I, R41K, I64M, H69K, L89M, I93L | CRF02_AG |
| | CM17 | CM17 | AY051249 | None | | | | I13V, K14R, K20I, E35D, M36I, H69K, L89M, I93L | CRF02_AG |
| | CM168 | CM168 | AY051247 | None | | | | I13V, K14R, K20I, E35D, M36I, R41K, H69K, L89M, I93L | CRF02_AG |
| | CM143 | CM143 | AY051241 | None | | | | I13V, K20I, E35D, M36I, R41K, H69K, L89M, I93L | CRF02_AG |
| | CM140 | CM140 | AY051238 | None | | | V11I | I13V, K14R, K20I, E35D, M36I, N37E, R41K, H69K, L89M, I93L | CRF02_AG |
| | CM136 | CM136 | AY051237 | None | | | | I13V, K20I, E35D, M36I, R41K, H69K, L89M, I93L | CRF02_AG |
| | CM123 | CM123 | AY051231 | None | | | | I13V, K14R, K20I, E35D, M36I, R41K, L63M, H69K, I72V, L89M, I93L | CRF02_AG |
| | CM122 | CM122 | AY051230 | None | | | | I13V, K14R, K20I, E35D, M36I, R41K, I64M, H69K, V77I, L89M, I93L | CRF02_AG |
| | CM119 | CM119 | AY051227 | None | | | | I13V, K14R, K20I, E35D, M36I, R41K, I64M, C67E, H69K, L89M, I93L | CRF02_AG |
| Holguin (2002) | AH_G7019 | AH_G7019 | AF354027 | None | | | | Q2S, I13A, K20I, E35D, M36I, R41K, L63P, H69K, K70R, L89M, I93M | CRF02_AG |
| | AH_2703 | AH_2703 | AF354021 | None | | | | L10V, I13V, I15V, G16E, K20I, E35D, M36I, P39T, L63S, I64L, H69K, G78R, L89M | CRF02_AG |
| | AH_19770 | AH_19770 | AF354007 | None | | | | I13V, K14R, I15V, K20I, E35D, M36I, R41K, L63P, H69K, I72M, L89M | CRF02_AG |
| | AH_18455 | AH_18455 | AF354003 | None | | | | I13V, K14R, K20I, E35D, M36I, R41K, L63P, H69K, I72M, L89M | CRF02_AG |
| Pandrea (2002) | IP_97CIRMF70 | 97CIRMF70 | AY140632 | None | | | | I13V, K14R, K20I, E35D, M36I, R41K, H69K, L89M | CRF02_AG |
| | IP_97CIRMF58 | 97CIRMF58 | AY140641 | None | | | | I13V, K20R, E35D, M36I, N37D, R41K, L63T, I64M, H69K, I72T, L89M | CRF02_AG |
| | IP_97CIRMF04 | 97CIRMF04 | AY140642 | None | | | | I13V, K14R, I15V, G16E, K20I, E35D, M36I, R41K, K43R, L63P, H69K, K70R, L89M | CRF02_AG |
| Snoeck (2002) | BE20 | BE20 | AF339020 | None | | | | I13V, K14R, K20I, E35D, M36I, N37S, P39PS, R41K, H69K, V82I, L89M | CRF02_AG |
| Tebit (2002) | 99CMBD5 | 99CMBD5 | AF355300 | None | | | | I13V, K14R, G16D, K20I, E35D, M36I, R41K, H69K, I72V, L89M | CRF02_AG |
| | 99CMBD4 | 99CMBD4 | AF355299 | None | | | | I13V, Q18R, K20I, E35D, M36I, L38I, R41K, H69K, L89M | CRF02_AG |
| Huang (2003) | POC44951 | POC44951 | AF447831 | None | | | | I13V, K14R, K20I, E35D, M36I, N37E, L63P, H69K, L89M | CRF02_AG |
| Njouom (2003) | 42pol | 42pol | AY204314 | None | | | | I13V, K14R, I15V, K20I, E35D, M36I, R41K, I64M, H69K, L89M | CRF02_AG |
| Toni (2003) | TTDdp12 | TTDdp12 | AY207664 | None | | | | I13V, G16E, K20I, E35D, M36I, R41K, K43R, L63H, H69K, L89M | CRF02_AG |
| | TTDdp44 | TTDdp44 | AY207690 | None | | | | I13V, K14R, G17E, K20I, E35D, M36I, R41K, H69K, K70R, I72IV, L89M | CRF02_AG |
| | TTDdp45 | TTDdp45 | AY207691 | None | | | | T4P, L10I, I13V, K14R, L19P, K20I, E35D, M36I, R41K, L63P, H69K, K70R, L89M | CRF02_AG |
| | TTDdp58 | TTDdp58 | AY207701 | None | | | | I13V, K14R, K20I, E35D, M36I, R41K, H69K, L89M | CRF02_AG |
| | TTDpci140 | TTDpci140 | AY207743 | None | | | | I13A, K14KR, G16GE, L19LI, K20I, E35D, M36I, R41K, H69K, L89M | CRF02_AG |
| | TTDpci142 | TTDpci142 | AY207711 | None | | | | I13V, K14R, K20I, E35D, M36I, R41K, L63P, H69K, L89M | CRF02_AG |
| | TTDpci144 | TTDpci144 | AY207713 | None | | | | L10I, I13V, G16E, K20R, E35D, M36I, R41K, R57K, H69Q, L89M | CRF02_AG |
| | TTDpci147 | TTDpci147 | AY207716 | None | | | | I13V, K14R, L19P, K20I, E35D, M36I, N37D, R41K, I64L, H69K, K70R, L89M | CRF02_AG |
| | TTDpci150 | TTDpci150 | AY207718 | None | | | | I13V, G16E, K20I, E35D, M36I, R41K, I64M, H69K, L89M | CRF02_AG |
| | TTDpci159 | TTDpci159 | AY207727 | None | | | I50IS | I13A, I15IL, K20I, A22V, E35D, M36I, R41K, L63P, H69K, L89I | CRF02_AG |
| | TTDdp17 | TTDdp17 | AY207669 | None | | | | I13V, K14R, G16E, K20I, E35D, M36I, R41K, L63H, H69K, L89M | CRF02_AG |
| | TTDdp46 | TTDdp46 | AY207692 | None | | | | I13V, K14R, G16E, K20I, E35D, M36I, R41K, I64L, H69K, K70R, L89M | CRF02_AG |
| | TTDdp56 | TTDdp56 | AY207700 | None | | | | I13V, I15IV, E35D, M36I, R41K, H69K, K70KR, L89M | CRF02_AG |
| Vergne (2003) | VL99SN125HPD | 99SN125 | AJ583712 | None | | | | L10I, T12A, I13V, E35D, M36I, R41K, K45R, L63P, H69K, K70R, L89M, T91I | CRF02_AG |
| | VL98SN53HALD | 98SN53 | AJ583735 | None | | | | K14R, E35D, M36I, R41K, R57K, H69K, L89M | CRF02_AG |
| Eshleman (2004) | ABB117 | ABB117 | AY444239 | None | | | L89V | I13V, K14R, K20I, E35D, M36L, R41K, I66V, H69K, V77I | CRF02_AG |
| | ABB20 | ABB20 | AY444246 | None | | | | I13V, K20I, E35D, M36I, R41K, H69K, L89M | CRF02_AG |
| | ABB163 | ABB163 | AY444242 | None | | | | I13V, K14R, K20I, E35D, M36I, R41K, I64M, H69K, V77I, L89M | CRF02_AG |
| | ABB78 | ABB78 | AY444256 | None | | | | I13V, K14R, G16E, K20I, E35D, M36I, R41K, H69K, L89M | CRF02_AG |
| | ABB46 | ABB46 | AY444250 | None | | | | I13V, K14R, L19P, K20I, E35D, M36I, R41K, H69K, L89M | CRF02_AG |
| | ABB53 | ABB53 | AY444252 | None | | | | I13V, K14R, K20I, E35D, M36I, N37D, R41K, L63P, G68E, H69R, I72IV, L89M | CRF02_AG |
| | ABB91 | ABB91 | AY444258 | None | | | | I13V, K14R, K20I, E35D, M36I, R41K, H69K, L89M | CRF02_AG |
| Kijak (2004) | 0008BBY | 01CM.0008 | AY371124 | None | | | | I13V, K14R, K20I, E35D, M36I, R41K, H69K, L89M | CRF02_AG |
| | 0014BBY | 02CM.0014 | AY371126 | None | | | | I13V, K14R, K20I, E35D, M36I, R41K, H69K, L89M | CRF02_AG |
| | 0074NY | 01CM.0074 | AY371131 | None | | | | I13V, K14R, K20I, E35D, M36I, R41K, H69K, L89M | CRF02_AG |
| | 0925MO | 01CM.0925 | AY371134 | None | | | | L10I, I13V, G16E, K20I, E35D, M36I, N37S, R41K, L63I, H69Q, L89M | CRF02_AG |
| Konings (2004) | KF_Pat17 | 00CM1725 | AY359699 | None | | | | I13V, K14R, K20I, E35D, M36I, R41K, H69K, K70R, L89M | CRF02_AG |
| | KF_Pat18 | 01CM5581 | AY359700 | None | | | | I13V, K14R, K20I, E35D, M36I, R41K, H69K, L89M | CRF02_AG |
| | KF_Pat22 | 00CM3666 | AY359704 | None | | | | I13V, K14R, G16E, K20I, E35D, M36I, R41K, H69K, L89M | CRF02_AG |
| | KF_Pat23 | 00CM2987 | AY359705 | None | | | | I13V, K14R, K20I, E35D, M36I, N37D, R41K, H69K, L89M, L90F | CRF02_AG |
| | KF_Pat25 | 00CM4253 | AY359707 | None | | | | I13V, K14R, L19P, K20I, E35D, M36I, R41K, H69K, L89M | CRF02_AG |
| | KF_Pat56 | 01CM5795 | AY359738 | None | | | | L10V, T12A, I13V, K14R, G16E, K20I, E35D, M36I, R41H, H69K, L89M | CRF02_AG |
| | KF_Pat62 | 00CM1213 | AY359744 | None | | | | I13V, K14R, K20I, E35D, M36I, R41K, E65A, H69K, N83I, L89T, L90F | CRF02_AG |
| | KF_Pat63 | 00CM1384 | AY359745 | None | | | | I13V, K14R, K20I, E35D, M36I, R41K, H69K, L89M | CRF02_AG |
| | KF_Pat64 | 00CM1840 | AY359746 | None | | | | I13V, K14R, K20I, E35D, M36I, R41K, H69K, L89M | CRF02_AG |
| | KF_Pat66 | 00CM2201 | AY359748 | None | | | | I13V, K14R, K20I, E35D, M36I, R41K, H69K, L89M | CRF02_AG |
| | KF_Pat71 | 00CM4375 | AY359753 | None | | | | I13V, K14R, K20I, E35D, M36I, P39S, R41K, L63P, H69K, L89M | CRF02_AG |
| | KF_Pat84 | 00CM3577 | AY359766 | None | | | | I13V, K14R, K20I, E35D, M36I, I64M, H69K, K70E, L89M | CRF02_AG |
| | KF_Pat85 | 00CM1748 | AY359767 | None | | | | I13V, K14R, K20I, E35D, M36I, R41K, H69K, L89M | CRF02_AG |
| | KF_Pat86 | 00CM2845 | AY359768 | None | | | | I13V, K14R, K20I, E35D, M36I, R41K, H69K, L89M | CRF02_AG |
| | KF_Pat87 | 00CM2224 | AY359769 | None | | | | L10V, I13V, K14R, L19P, K20I, E35D, M36I, R41K, H69K, L89M, L90F | CRF02_AG |
| | KF_Pat88 | 01CM5337 | AY359770 | None | | | | I13V, K14R, G16E, L19V, K20I, E35D, M36I, R41K, H69K, K70E, L89M | CRF02_AG |
| | KF_Pat105 | 01CM6078 | AY359787 | None | | | | I13V, K14R, K20I, E35D, M36I, R41K, I64M, H69K, L89M | CRF02_AG |
| | KF_Pat106 | 01CM5855 | AY359788 | None | | | | I13V, L19P, K20I, E35D, M36I, R41K, H69K, L89M | CRF02_AG |
| | KF_Pat107 | 02CM7633 | AY359789 | None | | | | I13V, K14R, K20I, E35D, M36I, R41K, H69K, K70R, L89M | CRF02_AG |
| | KF_Pat111 | 02CM7545 | AY359793 | None | | | | T12K, I13V, K14R, K20I, E35D, M36I, P39S, R41K, H69K, L89M | CRF02_AG |
| Parreira (2004) | PR_Pat28 | PR535027 | AJ535027 | None | | | | I13V, K14R, G17E, K20I, E35D, M36I, R41K, I64M, H69K, K70R, L89M | CRF02_AG |
| Pieniazek (2004) | BF222 | BF222 | AY645787 | None | | | | I3V, I13A, K14R, K20I, E35D, M36I, R41K, H69K, L89M | CRF02_AG |
| | BF367 | BF367 | AY645791 | None | | | | I3V, I13V, K14R, K20I, E35D, M36I, L38K, R41K, H69K, L89M | CRF02_AG |
| Snoeck (2004) | BE35 | BE35 | AY900738 | None | | | | Q2QH, I13V, K14R, K20I, E35D, M36I, R41K, H69K, L89M | CRF02_AG |
| | BE79 | BE79 | AY900962 | None | | | | I13V, K14R, K20I, E35D, M36I, R41K, H69K, L89M | CRF02_AG |
| Arien (2005) | VI2642 | VI2642 | DQ177216 | None | | | | I13V, I15V, K20V, E35D, M36I, R41K, K43R, H69K, L89M | CRF02_AG |
| Carr (2005) | 0208NY | 0208NY | AY847399 | None | | | | I13V, K14R, G16E, K20I, E35D, M36I, R41K, V77I, L89M | CRF02_AG |
| | 0074NY | 0074NY | AY847410 | None | | | | I13V, K14R, K20I, E35D, M36I, R41K, H69K, L89M | CRF02_AG |
| | 0180MA | 0180MA | AY847421 | None | | | | I13V, K14R, L19I, K20I, E35D, M36I, R41K, I62V, H69K, L89M | CRF02_AG |
| | 0925MO | 0925MO | AY847401 | None | | | | L10I, I13V, G16E, K20I, E35D, M36I, N37S, R41K, L63I, H69Q, L89M | CRF02_AG |
| | 4077STN | 4077STN | AY847389 | None | | | | I13V, K14R, K20I, E35D, M36I, R41K, H69K, L89M | CRF02_AG |
| | 0186BA | 0186BA | AY847396 | None | | | | I13V, G16E, K20I, E35D, M36I, R41K, I64M, H69K, K70R, L89M | CRF02_AG |
| | 0008BBY | 0008BBY | AY847411 | None | | | | I13V, K14R, K20I, E35D, M36I, R41K, H69K, L89M | CRF02_AG |
| | 0155BA | 0155BA | AY847409 | None | | | | I13V, K14KR, L19P, K20I, E35D, M36I, R41K, H69K, L89M | CRF02_AG |
| | 4217STN | 4217STN | AY847374 | None | | | | I13V, K14R, K20R, E35D, M36I, N37S, R41K, H69K, K70Q, L89M | CRF02_AG |
| | 2327SA | 2327SA | AY847428 | None | | | | I13V, K14R, I15V, K20I, E35D, M36I, R41K, I64M, H69K, V82I, L89M | CRF02_AG |
| | 3103MN | 3103MN | AY847436 | None | | | | L10V, I13V, L19P, K20I, E35D, M36I, R41K, H69K, L89M | CRF02_AG |
| | 2378LE | 2378LE | AY847431 | None | | | | I13V, K14R, K20I, E35D, M36I, R41K, H69K, L89M | CRF02_AG |
| | 3447NJ | 3447NJ | AY847369 | None | | | | I13V, K14R, G16E, K20I, E35D, M36I, R41K, H69K, L89M | CRF02_AG |
| | 2324SA | 2324SA | AY847427 | None | | | | I13V, K14R, G16E, K20I, E35D, M36I, R41K, I64M, H69K, L89M | CRF02_AG |
| | 4286STN | 4286STN | AY847375 | None | | | | I13V, K20R, E35D, M36I, N37S, R41K, H69K, K70Q, L89M | CRF02_AG |
| | 0014BBY | 0014BBY | AY847415 | None | | | | I13V, K14R, K20I, E35D, M36I, R41K, H69K, L89M | CRF02_AG |
| | 3217MN | 3217MN | AY847404 | None | | | V11I | L10V, I13A, G16E, K20I, E35D, M36I, R41K, H69K, K70R, L89M | CRF02_AG |
| | 2693ND | 2693ND | AY847444 | None | | | | I13V, K14R, G16E, K20I, E35D, M36I, L38F, R41K, H69K, L89M | CRF02_AG |
| | 2685ND | 2685ND | AY847443 | None | | | | I13V, K20R, E35D, M36I, R41K, H69K, L89M | CRF02_AG |
| | 2772YI | 2772YI | AY847445 | None | | | | L10V, I13V, K14R, I15V, K20I, E35D, M36I, R41K, I64M, H69K, L89M | CRF02_AG |
| | 2888HA | 2888HA | AY847447 | None | | | | I13V, K14R, K20V, E35D, M36I, R41K, H69K, L89M | CRF02_AG |
| | 02UZ658 | 02UZ658 | AY845780 | None | | | | I13V, K14R, G16E, K20I, E35D, M36I, N37D, R41K, H69K, L89M | CRF02_AG |
| | 02UZ675 | 02UZ675 | AY845794 | None | | | | I13V, K14R, G16E, K20I, E35D, M36I, N37D, R41K, H69K, L89M | CRF02_AG |
| | 02UZ678 | 02UZ678 | AY845796 | None | | | | T12I, I13V, K14R, G16E, K20I, E35D, M36I, N37D, R41K, I64V, H69K, L89M, I93L | CRF02_AG |
| | 02UZ683 | 02UZ683 | AY845799 | None | | | | I13V, K14R, G16E, K20I, E35D, M36I, N37D, R41K, H69K, L89M | CRF02_AG |
| | 02UZ694 | 02UZ694 | AY845803 | None | | | | I13V, K14R, G16E, K20I, E35D, M36I, N37D, R41K, H69K, L89M | CRF02_AG |
| | 02UZ704 | 02UZ704 | AY845809 | None | | | | I13V, K14R, G16E, K20I, E35D, M36I, N37D, R41K, H69K, L89M | CRF02_AG |
| | 02UZ710 | 02UZ710 | AY845813 | None | | | | I13V, K14R, G16E, K20I, E35D, M36I, N37D, R41K, H69K, L89M | CRF02_AG |
| | 02UZ731 | 02UZ731 | AY845822 | None | | | | I13V, K14R, G16E, K20I, E35D, M36I, N37D, H69K, L89M | CRF02_AG |
| | 02UZ736 | 02UZ736 | AY845826 | None | | | | I13V, K14R, G16E, K20I, E35D, M36I, N37D, R41K, H69K, L89M | CRF02_AG |
| | 02UZ760 | 02UZ760 | AY845840 | None | | | | I13V, K14R, G16E, K20I, E35D, M36I, N37D, R41K, H69K, L89M | CRF02_AG |
| | 02UZ804 | 02UZ804 | AY845854 | None | | | | I13V, K14R, K20I, E35D, M36I, N37D, R41K, H69K, L89M | CRF02_AG |
| | 02UZ813 | 02UZ813 | AY845856 | None | | | | I13V, K14R, G16E, K20I, E35D, M36I, R41K, H69K, L89M | CRF02_AG |
| | 02UZ815 | 02UZ815 | AY845716 | None | | | | L10V, I13V, K14R, G16E, L19P, K20I, E35D, M36I, R41K, H69K, L89M | CRF02_AG |
| | 02UZ834 | 02UZ834 | AY845726 | None | | | | I13V, K14R, G16E, K20I, E35D, M36I, N37D, R41K, H69K, L89M | CRF02_AG |
| Carr (2005) | 01NGPL148 | 01NGPL148 | DQ013268 | None | | | | I13V, K14R, I15V, K20I, E35D, M36I, R41K, L63A, H69K, L89M | CRF02_AG |
| | 01NGPL710 | 01NGPL710 | DQ013281 | None | | | | T12A, I13V, K14R, G16E, K20I, E35D, M36I, R41K, L63A, H69K, L89M | CRF02_AG |
| | PL0710 | PL0710 | DQ168577 | None | | | | T12A, I13V, K14R, G16E, K20I, E35D, M36I, R41K, L63A, H69K, L89M | CRF02_AG |
| Holguin (2005) | 1134-01 | 01_1134-01 | AY248307 | None | | | | I13V, K14R, K20I, E35D, M36I, R41K, H69K, L89M | CRF02_AG |
| | 00044237 | 02_44237 | AY248311 | None | | | | I13V, I15V, K20I, E35D, M36I, R41K, H69K, K70R, L89M | CRF02_AG |
| | 00062439 | 02_62439 | AY248313 | None | | | | I13V, K14R, G16E, K20I, E35D, M36I, R41K, L63P, H69K, L89M | CRF02_AG |
| | 69610-02 | 02_69610-2 | AY248323 | None | | | | I13V, K14R, K20I, E35D, M36I, N37S, R41K, H69K, L89M | CRF02_AG |
| K'Aluoch (2005) | OK_TC026604 | TC026604 | DQ079823 | None | | | | I13V, K14R, G16A, E35D, M36I, R41K, R57K, H69K, L89M | CRF02_AG |
| Kinomoto (2005) | Gh_T10 | Gh_T10 | AB187554 | None | | | | L10V, T12A, I13V, K14R, I15V, G16E, L19P, K20I, E35D, M36I, N37D, R41K, H69K, L89M | CRF02_AG |
| | Gh_T17 | Gh_T17 | AB187555 | None | | | | L10V, T12A, I13V, K14R, I15V, G16E, L19P, K20I, E35D, M36I, N37D, R41K, H69K, L89M | CRF02_AG |
| | Gh_K17 | Gh_K17 | AB187541 | None | | | | L10V, T12A, I13V, K14R, I15V, G16E, L19P, K20I, E35D, M36I, N37D, R41K, H69K, L89M | CRF02_AG |
| | Gh_K53 | Gh_K53 | AB187550 | None | | | | I13A, K14R, K20I, E35D, M36I, R41K, H69K, L89M | CRF02_AG |
| | Gh_A13 | Gh_A13 | AB187531 | None | | | | I13V, K20I, E35D, M36I, R41K, H69K, K70R, I72M, L89M | CRF02_AG |
| | Gh_A14 | Gh_A14 | AB187532 | None | | | | I13V, G16E, K20I, E35D, M36I, R41K, H69K, K70R, L89M | CRF02_AG |
| Ly (2005) | NL_KHM_HM10 | KHM_HM10 | DQ013577 | None | | | | I15V, E35D, M36I, R41K, R57K, H69K, L89M | CRF02_AG |
| Non-B Workgroup (2005) | UK1555 | UK1555 | AY900810 | None | | | L89V | I13V, K20L, E35D, M36I, R41K, L63P, H69K | CRF02_AG |
| | UK2146 | UK2146 | AY900856 | None | | | | I13V, G16GE, K20I, E35D, M36I, R41K, I64M, H69K, K70R, L89M | CRF02_AG |
| | PL34372 | 55855 | AY900706 | None | | | | I13V, K14R, I15IV, K20I, E35D, M36I, R41K, I64M, H69K, I72IL, L89M | CRF02_AG |
| | PL34988 | 57183 | AY900716 | None | | | | I3IS, W6WR, I13V, K20I, E35D, M36I, R41K, I64M, H69K, K70R, L89M | CRF02_AG |
| | PL34304 | 55726 | AY901073 | None | | | | I13V, K14R, G17E, K20I, E35D, M36I, R41K, I64M, H69K, K70R, L89M | CRF02_AG |
| | PL37859 | 63507 | AY901080 | None | | | | I13V, K14R, K20I, E35D, M36I, R41K, I64M, H69K, L89M | CRF02_AG |
| | PL38694 | 69336 | AY901092 | None | | | | I13V, K14R, K20I, E35D, M36I, R41K, L63P, H69K, K70R, L89M | CRF02_AG |
| | PL41131 | 70774 | | None | | | | I13V, K14KR, G17E, K20I, E35D, M36I, R41K, I64M, H69K, K70R, L89M | CRF02_AG |
| | UK4985 | UK4985 | AY901215 | None | | | | I13V, K14R, G16E, K20I, E35D, M36I, N37D, R41K, H69K, K70R, I72V, L89M | CRF02_AG |
| | PL44466 | 78693 | | None | | | | I13V, G16E, K20I, E35D, M36I, R41K, H69K, K70R, L89M | CRF02_AG |
| | PL51295 | 96422 | | None | | | | I13V, K14R, G17E, K20I, E35D, M36I, R41K, H69K, K70R, L89M | CRF02_AG |
| | PL55432 | 107397 | | None | | | | I13V, K14R, G17E, K20I, E35D, M36I, R41K, I64M, H69K, K70R, L89M | CRF02_AG |
| Weber (2005) | 98M9782 | 98M9782 | AY677489 | None | | | | I13V, K14R, L19P, K20I, E35D, M36I, R41K, H69K, L89M | CRF02_AG |
| Zeh (2005) | 99NG1073 | 99NG1073 | AY103318 | None | | | G48E | I13V, K14R, K20I, E35D, M36I, G40E, R41K, L63S, H69K, L89M, I93L | CRF02_AG |
| | 99NG1115 | 99NG1115 | AY103319 | None | | | | T12A, I13V, K14R, I15V, K20I, E35D, M36I, R41K, I64M, H69K, K70E, L89M, I93L | CRF02_AG |
| | 99NG1133 | 99NG1133 | AY103320 | None | | | | I13A, K14R, K20I, E35D, M36I, R41K, K43R, L63P, H69K, K70R, L89M, I93L | CRF02_AG |
| | 99NG1210 | 99NG1210 | AY103324 | None | | | | I13V, K20I, E35D, M36I, R41K, H69K, L89M, I93L | CRF02_AG |
| | 99NG1295 | 99NG1295 | AY103329 | None | | | | I13V, K14R, G17E, K20I, E35D, M36I, R41K, H69K, K70R, L89M, I93L | CRF02_AG |
| | 99NG383 | 99NG383 | AY103333 | None | | | | I13V, K14R, G16E, K20I, E35D, M36I, R41K, H69K, L89M, I93L | CRF02_AG |
| | 99NG513 | 99NG513 | AY103334 | None | | | | I13V, K14R, I15V, G16E, K20I, E35D, M36I, R41K, H69K, L89M, I93L | CRF02_AG |
| | 99NG811 | 99NG811 | AY103352 | None | | | | I13A, K14R, K20I, E35D, M36I, R41K, L63P, H69K, K70R, L89M, I93L | CRF02_AG |
| | 99NG853 | 99NG853 | AY103355 | None | | | | I13V, K14R, K20I, E35D, M36I, N37D, R41K, H69K, L89M, I93L | CRF02_AG |
| | 99NG859 | 99NG859 | AY103357 | None | | | | I13V, K20I, E35D, M36I, R41K, H69K, I72M, L89M, I93L | CRF02_AG |
| | 99NG89 | 99NG89 | AY103361 | None | | | | I13V, K20I, E35D, M36I, R41K, I64L, H69K, L89M, I93L | CRF02_AG |
| | 99NG795 | 99NG795 | AY103406 | None | | | | L10I, I13V, K14R, G16E, E35D, M36I, R41K, L63T, H69Q, L89M, I93L | CRF02_AG |
| Babic (2006) | DB_SI378-02 | SI378-02 | AJ971094 | None | | | | I13V, K14R, G16E, K20I, E35D, M36I, R41K, I64L, H69K, K70R, L89M | CRF02_AG |
| | DB_SI376-02 | SI376-02 | AJ971095 | None | | | | L10V, I13V, K14R, G16E, L19LP, K20I, E35D, M36I, R41K, I64IL, H69K, L89M | CRF02_AG |
| | DB_SI7658-01 | SI7658-01 | AJ971270 | None | | | | I13V, K14R, G16E, K20I, E35D, M36I, N37D, R41K, K43R, L63H, I64L, H69K, K70R, L89M | CRF02_AG |
| | DB_SI1916-04 | SI1916-04 | AJ971271 | None | | | | I13V, K20I, E35D, M36I, P39PS, R41K, L63P, H69K, L89M | CRF02_AG |
| Carr (2006) | 2931HA | 2931HA | DQ826727 | None | | | | I13V, L19P, K20I, E35D, M36I, R41K, H69K, L89M | CRF02_AG |
| Jayaraman (2006) | 2-00-0552 | 2-00-0552 | | None | | | | I13V, K14R, G16E, K20I, E35D, M36I, R41K, I64M, H69K, K70R, L89M | CRF02_AG |
| Koizumi (2006) | YK_04CM022 | YK_04CM022 | DQ461833 | None | | | | Q2P, I13V, K14R, K20I, E35D, M36I, R41K, V56I, I64L, H69K, L89M | CRF02_AG |
| | YK_04CM025 | YK_04CM025 | DQ461835 | None | | | | T12I, I13V, K14R, L19P, K20I, E35D, M36I, R41K, K45R, H69K, L89M | CRF02_AG |
| | YK_04CM043 | YK_04CM043 | DQ461846 | None | | | | L10P, G16E, E35D, M36I, N37D, L63P, H69K, K70R, L89M | CRF02_AG |
| | YK_04CM058 | YK_04CM058 | DQ461850 | None | | | | G16E, E35D, M36I, N37D, H69K, K70R, L89M | CRF02_AG |
| | YK_04CM061 | YK_04CM061 | DQ461852 | None | | | | I13V, K14R, L19P, K20I, E35D, M36I, R41K, K45R, H69K, L89M | CRF02_AG |
| | YK_04CM066 | YK_04CM066 | DQ461857 | None | | | | I13V, K14R, G16E, K20I, E35D, M36I, R41K, H69K, I72V, L89M | CRF02_AG |
| | YK_04CM075 | YK_04CM075 | DQ461862 | None | | | | I13V, K14R, I15V, K20I, E35D, M36I, R41K, L63P, H69K, L89M | CRF02_AG |
| | YK_04CM095 | YK_04CM095 | DQ461872 | None | | | | I13V, K14R, G17E, K20I, E35D, M36I, R41K, H69K, K70R, V82I, L89M | CRF02_AG |
| Lawrence (2006) | 02FR1 | 02FR1 | DQ251597 | None | | | | T12Q, I13V, K14R, G16E, K20I, E35D, M36I, L63P, H69K, L89M | CRF02_AG |
| | 02FR10 | 02FR10 | DQ251606 | None | | | | T12Q, I13V, K14R, K20I, E35D, M36I, L63P, H69K, L89M | CRF02_AG |
| | 02FR16 | 02FR16 | DQ251612 | None | | | | T12Q, I13V, K14R, I15V, K20I, E35D, M36I, P39L, L63P, H69K, L89M | CRF02_AG |
| | 00FR18 | 00FR18 | DQ251614 | None | | | | T12Q, I13V, K14R, K20I, E35D, M36I, L63P, H69K, L89M | CRF02_AG |
| | 02FR30 | 02FR30 | DQ251626 | None | | | | I13V, K14R, K20I, E35D, M36I, R41K, L63S, I64M, H69K, V82I, L89M | CRF02_AG |
| | 04FR31 | 04FR31 | DQ251627 | None | | | | T12A, I13V, K14R, I15V, G16E, K20I, E35D, M36I, R41K, L63LP, H69K, L89M | CRF02_AG |
| Marechal (2006) | JF_090 | JF_090 | DQ443686 | None | | | | L10V, I15V, L19M, K20R, E35D, M36I, R41K, H69Q, L89M | CRF02_AG |
| Ndongmo (2006) | CM76 | CBN_CM76 | DQ394121 | None | | | | I13V, K20I, E35D, M36I, N37D, H69K, T74S, L89M, I93L | CRF02_AG |
| | CM107 | CBN_CM107 | DQ394127 | None | | | | I13V, K14R, L19I, K20I, E35D, M36I, R41K, H69K, L89M, I93L | CRF02_AG |
| | CM229 | CBN_CM229 | DQ394146 | None | | | | I13V, K20I, E34A, E35D, N37S, R41K, H69K, L89M, I93L | CRF02_AG |
| | CM249 | CBN_CM249 | DQ394148 | None | | | | L10V, I13V, L19P, K20I, E35D, M36I, R41K, H69K, L89M, I93L | CRF02_AG |
| | CM251 | CBN_CM251 | DQ394149 | None | | | | I13V, K20I, E35D, M36I, R41K, C67Y, H69K, L89M, I93L | CRF02_AG |
| | CM259 | CBN_CM259 | DQ394151 | None | | | | I13V, K14R, K20I, E35D, M36I, R41K, H69K, L89M, I93L | CRF02_AG |
| | CM360 | CBN_CM360 | DQ394164 | None | | | | I13V, K14R, K20I, E35D, M36I, R41K, H69K, L89M, I93L | CRF02_AG |
| | CM290 | CBN_CM290 | DQ394172 | None | | | | E35D, M36I, R41K, R57K, H69K, L89M, I93L | CRF02_AG |
| | CM318 | CBN_CM318 | DQ394173 | None | | | | I13V, E35D, M36I, N37D, R41K, H69K, L89M, I93L | CRF02_AG |
| | CM384 | CBN_CM384 | DQ394176 | None | | | | I13V, E35D, M36I, N37D, R41K, K43R, L63S, H69K, I72V, L89M, I93L | CRF02_AG |
| Njai (2006) | MP1372 | 99CM.1372 | AM279395 | None | | | | L10I, I13V, K14R, K20I, E35D, M36I, R41K, L63P, C67E, H69K, V82I, L89M, I93V | CRF02_AG |
| Ojesina (2006) | AIO_DDJ025 | AIO_DDJ025 | DQ273925 | None | | | | I13V, K14R, K20I, E35D, M36I, R41K, K43R, L63C, H69K, L89M | CRF02_AG |
| | AIO_DDJ164 | AIO_DDJ164 | DQ273947 | None | | | | I13V, K14R, K20I, E35D, M36I, R41K, H69K, K70R, L89M | CRF02_AG |
| Tebit (2006) | A1035 | A1035 | DQ682717 | None | | | | I13V, K20I, E35D, M36I, R41K, I64M, H69K, K70R, P79H, N83Y, L89M, N98Y | CRF02_AG |
| | A696 | A696 | DQ682721 | None | | | | I13V, K14R, L19P, K20I, E35D, M36I, L63P, H69K, L89M | CRF02_AG |
| | A465 | A465 | DQ682727 | None | | | | I13V, L19T, K20I, E35D, M36I, R41K, H69K, I72L, L89M | CRF02_AG |
| | D041 | D041 | DQ682738 | None | | | | I13V, K14I, K20I, E35D, M36I, N37D, R41K, R57K, L63P, H69K, K70R, N83Y, L89M | CRF02_AG |
| | D043 | D043 | DQ682740 | None | | | | T12K, I13A, K14R, K20I, E35D, M36I, N37D, R41K, L63Y, H69K, K70R, L89M, N98Y | CRF02_AG |
| Vergne (2006) | LV_03BF-ORAV288 | 03BF-288 | AM181800 | None | | | | L10LV, T12A, I13V, I15IV, G16E, K20I, E35D, M36I, R41K, I64M, H69K, K70KR, L89M | CRF02_AG |
| Vessiere (2006) | AV_M2507N | AV_M2507N | DQ297235 | None | | | | I13V, K14R, K20I, E35D, M36I, R41K, H69K, L89M | CRF02_AG |
| | AV_M2800N | AV_M2800N | DQ297239 | None | | | | I13V, K14R, K20I, E35D, M36I, R41K, H69K, L89M | CRF02_AG |
| | AV_M2810N | AV_M2810N | DQ297240 | None | | | | I13V, K14R, K20I, E35D, M36I, R41K, H69K, L89M | CRF02_AG |
| | AV_M2898N | AV_M2898N | DQ297243 | None | | | | I13V, G16E, K20I, E35D, M36I, R41K, L63S, H69K, L89M | CRF02_AG |
| | AV_M3164N | AV_M3164N | DQ297245 | None | | | | I13V, K14R, K20I, E35D, M36I, R41K, H69K, L89M | CRF02_AG |
| | AV_M3223N | AV_M3223N | DQ297247 | None | | | | I13V, G16E, K20I, E35D, M36I, N37S, R41K, G68E, H69K, K70R, L89M | CRF02_AG |
| | AV_M3397N | AV_M3397N | DQ297253 | None | | | | I13V, K14R, I15V, K20I, E35D, M36I, R41K, I64M, H69K, L89M | CRF02_AG |
| | AV_M3579N | AV_M3579N | DQ297256 | None | | | | I13V, K20I, E35D, M36I, R41K, H69K, K70R, L89M | CRF02_AG |
| | AV_M4004N | AV_M4004N | DQ297265 | None | | | | I13V, K14R, K20I, E35D, M36I, R41K, H69K, L89M | CRF02_AG |
| | AV_M4150N | AV_M4150N | DQ297192 | None | | | | I13V, G17E, K20I, E35D, M36I, N37D, H69K, L89M | CRF02_AG |
| | AV_M4156N | AV_M4156N | DQ297193 | None | | | | I13V, G16E, K20I, E35D, M36I, R41K, H69K, K70R, L89M | CRF02_AG |
| | AV_M4301N | AV_M4301N | DQ297197 | None | | | | I13V, K14R, G16E, K20I, E35D, M36I, R41K, R57K, H69K, L89M | CRF02_AG |
| | AV_M4751N | AV_M4751N | DQ297273 | None | | | | I13V, K20I, E35D, M36I, R41K, H69K, K70R, L89M | CRF02_AG |
| | AV_M4772N | AV_M4772N | DQ297202 | None | | | | L10I, I13V, K14R, L19P, K20I, E35D, M36I, N37D, R41K, H69K, L89M | CRF02_AG |
| | AV_M5639N | AV_M5639N | DQ297205 | None | | | | L10V, I13V, L19P, K20I, E35D, M36I, R41K, H69K, L89M | CRF02_AG |
| | AV_M9047N | AV_M9047N | DQ297277 | None | | | | I13V, K14R, K20I, E35D, M36I, R41K, H69K, L89M | CRF02_AG |
| | AV_M9157N | AV_M9157N | DQ297215 | None | | | | T12TA, I13V, K20I, E35D, M36I, R41K, L63LP, H69K, I72M, L89M | CRF02_AG |
| | AV_M9587N | AV_M9587N | DQ297225 | None | | | | I13V, K20I, E35D, M36I, R41K, H69K, K70R, L89M | CRF02_AG |
| | AV_M9636N | AV_M9636N | DQ297228 | None | | | | I13V, K14R, G16E, K20I, E35D, M36I, R41K, H69K, K70R, L89M | CRF02_AG |
| Vidal (2006) | NV_KS072 | 02.KS072 | AM041010 | None | | | | G16E, K20R, E35D, M36I, P39S, R41K, K45R, I62V, L63T, E65D, H69K, I72T, L89M | CRF02_AG |
| Derache (2007) | 1156 | 1156 | EF064448 | None | | | | I13V, K14R, G17D, K20I, E35D, M36I, R41K, I62V, H69K, K70R, T74S, L89M | CRF02_AG |
| | 1166 | 1166 | EF064454 | None | | | | I13A, K14R, G16E, K20I, E35D, M36I, R41K, L63P, H69K, K70R, L89M | CRF02_AG |
| | 1171 | 1171 | EF064456 | None | | | | I13V, K14R, K20I, E35D, M36I, R41K, L63P, H69K, K70R, L89M | CRF02_AG |
| | 1177 | 1177 | EF064462 | None | | | | I13A, K14R, K20I, E35D, M36I, R41K, H69K, L89M | CRF02_AG |
| | 1215 | 1215 | EF064482 | None | | | | I13V, K14R, K20I, E35D, M36I, R41K, L63P, H69K, L89M | CRF02_AG |
| | 1225 | 1225 | EF064484 | None | | | | I13V, K20I, E35D, M36I, R41K, I64L, H69K, L89M | CRF02_AG |
| | 1260 | 1260 | EF064504 | None | | | | T4D, L10I, E35D, M36I, R41K, L63P, H69K, K70H, L89M | CRF02_AG |
| | 1269 | 1269 | EF064508 | None | | | | I13V, K14R, I15V, K20I, E35D, M36I, R41K, H69K, I72M, L89M | CRF02_AG |
| | 1318 | 1318 | EF064533 | None | | | | L10V, I13V, K14R, G16E, K20V, E35D, M36I, R41K, K43R, H69K, I72M, L89M | CRF02_AG |
| | 1320 | 1320 | EF064534 | None | | | | L10I, I13V, K14R, G16E, E35D, M36I, L63T, H69K, K70R, L89M | CRF02_AG |
| | 1327 | 1327 | EF064538 | None | | | | L10I, I13V, K14R, G16E, E35D, M36I, N37D, R41K, H69K, L89M | CRF02_AG |
| Eyzaguirre (2007) | KZALM300218 | 03A300218 | EF576760 | None | | | | I13V, K14R, G16E, K20I, E35D, M36I, N37D, R41K, R57K, H69K, L89M | CRF02_AG |
| | KZALM300222 | 03A300222 | EF576763 | None | | | | I13V, K14R, G16E, K20I, E35D, M36I, N37D, R41K, H69K, L89M | CRF02_AG |
| | KZALM300239 | 03A300239 | EF576768 | None | | | | I13V, K14R, G16E, K20I, E35D, M36I, N37D, R41K, H69K, L89M | CRF02_AG |
| | KZYUZ300295 | 03Y300295 | EF576800 | None | | | | I13V, K14R, G16E, K20I, E35D, M36I, N37D, R41K, H69K, L89M | CRF02_AG |
| Holguin (2007) | LP565069 | LP565069 | DQ009069 | None | | | | I3V, L10I, I13V, K14R, I15V, K20I, E35D, M36I, R41K, I64M, H69K, L89M | CRF02_AG |
| | LP522901 | LP522901 | DQ009072 | None | | | | L10I, I13V, K20I, E35D, M36I, R41K, I64M, C67S, H69K, L89M | CRF02_AG |
| | LP82 | LP82 | DQ009073 | None | | | | I13V, K20I, E35D, M36I, R41K, I64M, H69K, L89M | CRF02_AG |
| | 571213 | 571213 | EF583183 | None | | | | I13V, K14R, G16GE, K20I, E35D, M36I, R41K, L63H, H69K, K70R, L89M | CRF02_AG |
| | 589060 | 589060 | EF583206 | None | | | | I13V, K14KR, L19P, K20I, E35D, M36I, N37D, R41K, L63P, H69K, L89M | CRF02_AG |
| | 604274 | 604274 | EF583236 | None | | | | I3V, L10I, I13V, G16E, K20I, E35D, M36I, R41K, I64MV, H69K, L89M | CRF02_AG |
| | 605305 | 605305 | EF583241 | None | | | | L10I, I13V, G16E, K20I, E35D, M36I, R41K, K43R, L63A, I64M, H69K, K70R, L89M | CRF02_AG |
| | 606806 | 606806 | EF583247 | None | | | | I13V, K14R, I15V, G17E, K20I, E35D, M36I, R41K, H69K, K70KR, I72M, L89M | CRF02_AG |
| | 612835 | 612835 | EF583260 | None | | | | I13V, K20I, E35D, M36I, N37D, P39PL, L63P, I64M, H69K, L89M | CRF02_AG |
| | 615738 | 615738 | EF583269 | None | | | | I3V, L10I, I13V, K14R, G17E, K20I, E35D, M36I, R41K, I64M, H69K, L89M | CRF02_AG |
| | 628000 | 628000 | EF583296 | None | | | | L10LV, I13V, K14R, I15V, K20I, E35D, M36I, R41K, L63S, H69K, K70KR, T74TS, L89M | CRF02_AG |
| | 633774 | 633774 | EF583299 | None | | | | L10V, I13V, G16E, L19P, K20I, E35D, M36I, N37S, R41K, H69K, K70R, I72V, L89M | CRF02_AG |
| McNulty (2007) | Cam26 | Cam26PL | DQ869225 | None | | | | K20I, E35D, M36I, N37E, R41K, H69K, L89M | CRF02_AG |
| | | Cam26DBS | DQ869224 | None | | | | K20I, E35D, M36I, N37E, R41K, H69K, L89M | CRF02_AG |
| Razafindratsimandresy (2007) | 31 | 31HIV-SEY | EF143522 | None | | | | I13V, K14R, K20I, E35D, M36I, R41K, I64L, H69K, K70KR, L89M | CRF02_AG |
| Sagoe (2007) | 72 | GHN72 | EF174564 | None | | | | I13V, K14KR, L19P, K20I, E35D, M36I, R41K, Q61H, H69K, L89M | CRF02_AG |
| | 81 | GHN81 | EF174565 | None | | | | I13AV, K14R, K20I, E35D, M36I, R41K, L63P, H69K, V82VI, L89M | CRF02_AG |
| | 36 | GHN36 | EF550533 | None | | | | I13A, K20I, E35D, M36I, R41K, L63LP, H69K, K70KR, L89M | CRF02_AG |
| | 96 | GHN96 | EF550538 | None | | | | T12E, I13V, K14R, K20I, E35D, M36I, R41K, L63LP, I64L, H69K, K70KR, L89M | CRF02_AG |
| Sanchez Onoro (2007) | 534834 | 534834 | | None | | | | I13V, K14R, K20I, E35D, M36I, R41K, H69K, K70R, L89M | CRF02_AG |
| | 559351 | 559351 | | None | | | | I3V, L10I, I13V, K20I, E35D, M36I, N37NY, R41K, I64M, H69K, L89M | CRF02_AG |
| | 604274 | 604274 | | None | | | | I3V, L10I, I13V, G16E, K20I, E35D, M36I, R41K, I64MV, H69K, L89M | CRF02_AG |
| | 614034 | 614034 | | None | | | L10LF | T12P, I13IV, K14R, L19LP, K20KM, E35D, M36MI, R41K, K43KR, L63P, H69HQ, K70KE, A71AT, L89LM, I93IL | CRF02_AG |
| | 619147 | 619147 | | None | | | | L10V, I13V, K14R, L19P, K20I, E35D, M36I, N37D, R41K, H69K, K70R, L89M | CRF02_AG |
| | 645626 | 645626 | | None | | | | I13V, K14R, G17E, K20I, E35D, M36I, R41K, I64M, H69K, K70R, L89M | CRF02_AG |
| | 714493 | 714493 | | None | | | | I13V, K14R, I15V, G17E, K20I, E35D, M36I, R41K, H69K, I72M, L89M | CRF02_AG |
| | 716294 | 716294 | | None | | | | I13V, K14R, L19P, K20I, E35D, M36I, N37D, R41K, L63P, H69K, L89M | CRF02_AG |
| Seyler (2007) | 599 | CS_599 | | None | | | | L10I, I13V, K14R, G16E, K20I, E35D, M36I, R41K, H69Q, K70R, L89M | CRF02_AG |
| Zhong (2007) | D0067 | O5CN_067 | EF199596 | None | | | | I13V, K14R, K20I, E35D, M36I, R41K, K43R, H69K, L89M | CRF02_AG |
| | D0070 | 05CN_070 | EF199599 | None | | | | L10I, I13V, G16E, E35D, M36I, N37S, R41K, H69Q, L89M | CRF02_AG |
| Caron (2008) | 1290 | Gab1290P | EU556456 | None | | | | I13V, K14R, G16E, K20I, E35D, M36I, R41K, H69K, K70R, L89M | CRF02_AG |
| | 1357 | Gab1357P | EU556460 | None | | | | I13V, K14R, L19P, K20I, E35D, M36I, R41K, L63P, H69K, L89M | CRF02_AG |
| | 2326 | Gab2326P | EU556464 | None | | | | I13V, K14R, L19P, K20I, E35D, M36I, R41K, L63P, H69K, L89M | CRF02_AG |
| | 2172 | Gab2172P | EU556472 | None | | | | L10I, V11T, I13V, K20I, E35D, M36I, R41K, H69K, K70R, L89M | CRF02_AG |
| Delgado (2008) | GH_010 | GH_010 | EU177887 | None | | | | L10V, I13V, L19P, K20I, E35D, M36I, N37E, R41K, Q61H, H69K, K70R, L89M | CRF02_AG |
| | GH_013 | GH_013 | EU177890 | None | | | | I13V, K20I, E35D, M36I, N37D, R41K, L63V, I64M, H69K, L89M | CRF02_AG |
| | GH_018 | GH_018 | EU177895 | None | | | | L10V, I13V, K14R, I15V, K20I, E35D, M36I, N37E, L63I, I64M, H69K, L89M | CRF02_AG |
| | GH_021 | GH_021 | EU177898 | None | | | | I13V, G16E, K20I, E35D, M36I, R41K, H69K, L89M | CRF02_AG |
| | GH_031 | GH_031 | EU177906 | None | | | | L10V, I13V, K14R, G16E, K20I, E35D, M36I, R41K, L63AS, E65ED, H69K, L89M | CRF02_AG |
| | GH_036 | GH_036 | EU177911 | None | | | | T12A, I13V, K14R, G17E, K20I, E35D, M36I, R41K, I64M, H69K, L89M | CRF02_AG |
| | GH_060 | GH_060 | EU177928 | None | | | | I13V, G16E, K20I, E35D, M36I, R41K, H69K, I72M, L89M | CRF02_AG |
| | GH_079 | GH_079 | EU177943 | None | | | | I13V, I15L, K20I, E35D, M36I, R41K, L63P, H69K, L89M | CRF02_AG |
| | GH_113 | GH_113 | EU177964 | None | | | | I13V, G16E, K20I, E35D, M36I, R41K, I64M, H69K, K70R, L89M | CRF02_AG |
| | GH_114 | GH_114 | EU177965 | None | | | | I13V, G16GE, K20I, E35D, M36I, R41K, I64L, H69K, L89M | CRF02_AG |
| | GH_116 | GH_116 | EU177967 | None | | | | I13V, K20I, E35D, M36I, R41K, H69K, V82I, L89M | CRF02_AG |
| | GH_120 | GH_120 | EU177970 | None | | | | I13V, G16E, K20I, E35D, M36I, R41K, H69K, K70R, L89M | CRF02_AG |
| | GH_127 | GH_127 | EU177975 | None | | | | I13V, K14R, K20I, E35D, M36I, R41K, H69K, K70R, L89M | CRF02_AG |
| | GH_140 | GH_140 | EU177986 | None | | | | I13V, K14R, G16E, K20I, E35D, M36I, R41K, H69K, K70R, L89M | CRF02_AG |
| | GH_141 | GH_141 | EU177987 | None | | | | I13V, K14R, G16E, K20I, E35D, M36I, R41K, I64M, H69K, K70R, L89M | CRF02_AG |
| | GH_147 | GH_147 | EU177993 | None | | | | I13V, K14KR, G16GE, K20I, E35D, M36I, R41K, I64IM, H69K, K70R, L89M | CRF02_AG |
| | GH_156 | GH_156 | EU177999 | None | | | | I13A, L19LS, K20I, E35D, M36I, R41K, L63P, H69K, K70R, L89M | CRF02_AG |
| | GH_158 | GH_158 | EU178000 | None | | | | T12K, I13V, K14R, G16E, K20I, E35D, M36I, R41K, I64M, H69K, L89M | CRF02_AG |
| | GH_165 | GH_165 | EU178004 | None | | | | L10LV, I13V, I15IV, G16E, K20I, E35D, M36I, R41K, H69K, K70R, I72T, L89M | CRF02_AG |
| | GH_166 | GH_166 | EU178005 | None | | | | I13V, K20I, E35D, M36I, N37S, R41K, H69K, L89M | CRF02_AG |
| | GH_167 | GH_167 | EU178006 | None | | | | I13V, K14R, K20R, E35D, M36I, R41K, H69K, L89M | CRF02_AG |
| | GH_170 | GH_170 | EU178008 | None | | | | I13V, K14R, G17E, K20I, E35D, M36I, R41K, I64M, H69K, K70R, L89M | CRF02_AG |
| | GH_176 | GH_176 | EU178013 | None | | | | I13V, G16E, K20R, E35D, M36I, R41K, L63S, H69K, K70R, L89M | CRF02_AG |
| | GH_183 | GH_183 | EU178018 | None | | | | I13V, K20I, E35D, M36I, N37S, R41K, D60E, H69K, L89M | CRF02_AG |
| | GH_190 | GH_190 | EU178023 | None | | | | L10LV, I13V, L19P, K20I, E35D, M36I, R41K, H69K, K70KR, L89M | CRF02_AG |
| | GH_202 | GH_202 | EU178034 | None | | | | I13V, I15L, G17GE, K20I, E35D, M36I, R41K, I62IV, I64L, H69K, L89M | CRF02_AG |
| | GH_205 | GH_205 | EU178036 | None | | | | I13V, G16E, K20I, E35D, M36I, R41K, L63T, I64M, H69K, K70R, L89M | CRF02_AG |
| | GH_208 | GH_208 | EU178039 | None | | | | L10I, I13V, K14R, I15V, K20I, E35D, M36I, R41K, H69K, L89M | CRF02_AG |
| | GH_212 | GH_212 | EU178041 | None | | | | L10I, I13V, G16E, L19P, K20IV, E35D, M36I, R41K, K43R, L63S, H69R, L89M | CRF02_AG |
| | GH_215 | GH_215 | EU178044 | None | | | | I13V, K14R, K20I, E35D, M36I, R41K, L63LP, H69K, K70R, V82I, L89M | CRF02_AG |
| | GH_216 | GH_216 | EU178045 | None | | | | I13V, K14R, G16E, K20I, E35D, M36I, R41K, H69K, K70R, L89M | CRF02_AG |
| | GH_223 | GH_223 | EU178052 | None | | | | I13V, L19P, K20I, E35D, M36I, R41K, I64M, H69K, L89M | CRF02_AG |
| | GH_224 | GH_224 | EU178053 | None | | | V32VL | I13V, K14R, G17E, K20I, E35D, M36I, L38LF, R41K, H69K, L89M | CRF02_AG |
| | GH_256 | GH_256 | EU178079 | None | | | | I13V, I15V, G16E, K20I, E35D, M36I, R41K, I64M, H69K, L89M | CRF02_AG |
| | GH_263 | GH_263 | EU178083 | None | | | | I13V, K14R, G16E, K20I, E35D, M36I, R41K, H69K, K70R, L89M | CRF02_AG |
| Derache (2008) | BKO-881 | BKO-881 | EU330648 | None | | | | I13V, K14R, G16E, K20I, E35D, M36I, R41K, H69K, L89M | CRF02_AG |
| | BKO-886 | BKO-886 | EU330651 | None | | | | I13V, K14R, G16E, K20I, E35D, M36I, R41K, H69K, L89M | CRF02_AG |
| | BKO-924 | BKO-924 | EU330667 | None | | | | I13A, K14R, G16E, K20I, E35D, M36I, R41K, H69K, K70R, L89M | CRF02_AG |
| | BKO-926 | BKO-926 | EU330669 | None | | | | I13V, K14R, L19P, K20I, E35D, M36I, R41K, L63P, H69K, L89M | CRF02_AG |
| | BKO-936 | BKO-936 | EU330673 | None | | | | I13V, Q18E, K20I, E35D, M36I, R41K, H69K, K70R, L89M | CRF02_AG |
| | BKO-953 | BKO-953 | EU330682 | None | | | | I13V, K14R, K20I, E35D, M36I, R41K, H69K, T74S, L89M | CRF02_AG |
| | BKO-964 | BKO-964 | EU330689 | None | | | | T12K, I13V, K14R, G16E, K20I, E35D, M36I, R41K, L63P, H69K, K70R, L89M | CRF02_AG |
| | BKO-969 | BKO-969 | EU330691 | None | | | | I13V, K14R, K20I, E35D, M36I, N37S, R41K, L63P, H69K, L89M | CRF02_AG |
| | BKO-971 | BKO-971 | EU330693 | None | | | | I13V, K14R, G16E, L19P, K20I, E35D, M36I, R41K, L63S, I64M, H69K, L89M | CRF02_AG |
| | BKO-1048 | BKO-1048 | EU330728 | None | | | | I13V, K14R, G16E, K20I, E35D, M36I, R41K, H69K, L89M | CRF02_AG |
| | SGO-01 | SGO-01 | EU330746 | None | | | | I13V, G16E, K20I, E35D, M36I, R41K, I64L, H69K, K70R, L89M | CRF02_AG |
| | SGO-09 | SGO-09 | EU330754 | None | | | L89V | I13A, K14R, K20I, E35D, M36I, R41K, L63S, H69K, I72M | CRF02_AG |
| | SGO-14 | SGO-14 | EU330759 | None | | | | T12A, I13V, K14R, I15V, K20I, E35D, M36I, R41K, L63A, H69K, L89M | CRF02_AG |
| | SGO-22 | SGO-22 | EU330766 | None | | | | I13V, G17E, K20I, E35D, M36I, R41K, H69K, K70R, T74S, L89M | CRF02_AG |
| | SGO-31 | SGO-31 | EU330775 | None | | | | I13V, K14R, G16E, K20I, E35D, M36I, R41K, H69K, K70R, L89M | CRF02_AG |
| | SGO-45 | SGO-45 | EU330789 | None | | | | I13V, K14R, G16E, K20I, E35D, M36I, R41K, K43R, L63S, I64L, H69K, K70R, L89I | CRF02_AG |
| | SGO-54 | SGO-54 | EU330798 | None | | | | L10V, I13V, K14R, G16E, K20I, E35D, M36I, N37S, P39S, R41K, H69K, K70R, L89M | CRF02_AG |
| | SGO-61 | SGO-61 | EU330805 | None | | | | I13V, G16E, L19P, K20I, E35D, M36I, R41K, H69K, L89M | CRF02_AG |
| | SGO-64 | SGO-64 | EU330808 | None | | | | I13V, L19P, K20I, E35D, M36I, R41K, H69K, L89M | CRF02_AG |
| | SGO-88 | SGO-88 | EU330829 | None | | | | L10I, I13V, K14R, K20I, E35D, M36I, N37S, R41K, H69K, L89M | CRF02_AG |
| | SGO-93 | SGO-93 | EU330833 | None | | | V11I, N83D | I13V, K14R, K20I, E35D, M36I, R41K, H69K, L89M, C95S | CRF02_AG |
| Holguin (2008) | SP38-367860 | SP38-367860 | EU255523 | None | | | | I13V, K14R, K20I, E35D, M36I, R41K, H69K, L89M | CRF02_AG |
| | SP17-344329 | SP17-344329 | EU342747 | None | | | | I13V, K14R, G16E, K20I, E35D, M36I, R57K, I64M, H69K, L89M | CRF02_AG |
| | SP63-25131 | SP63-25131 | EU342753 | None | | | | L10I, I13V, L19P, K20I, E35D, M36I, R41K, E65A, H69Q, L89M | CRF02_AG |
| | SP22-00033858 | SP22-00033858 | EU342755 | None | | | | I13V, K14R, K20I, E35D, M36I, R41K, H69K, K70R, L89M | CRF02_AG |
| | SP5-189360 | SP5-189360 | EU342773 | None | | | | I13V, G16E, K20I, E35D, M36I, R41K, H69K, K70R, L89M | CRF02_AG |
| | SP6-190683 | SP6-190683 | EU342774 | None | | | | I13V, G16E, K20I, E35D, M36I, R41K, H69K, K70R, L89M | CRF02_AG |
| | SP8-215375 | SP8-215375 | EU342775 | None | | | | I13V, L19P, K20I, E35D, M36I, R41K, H69K, L89M | CRF02_AG |
| | SP10-215375 | SP10-215375 | EU342777 | None | | | | I13V, L19P, K20I, E35D, M36I, R41K, H69K, L89M | CRF02_AG |
| | SP94-246975 | SP94-246975 | EU342781 | None | | | | L10V, I13V, G16E, K20R, E35D, M36I, P39S, R41K, K45R, L63T, E65D, H69K, L89M | CRF02_AG |
| | SP24-215375 | SP24-215375 | EU342816 | None | | | | I13V, L19P, K20I, E35D, M36I, R41K, H69K, L89M | CRF02_AG |
| | SP40-189360 | SP40-189360 | EU342820 | None | | | | I13V, G16E, K20I, E35D, M36I, R41K, H69K, K70R, L89M | CRF02_AG |
| | SP45-190683 | SP45-190683 | EU342824 | None | | | | I13V, G16E, K20I, E35D, M36I, R41K, H69K, K70R, L89M | CRF02_AG |
| | SP4-301233 | SP4-301233 | EU342788 | None | | | | K14R, K20I, E35D, M36I, R41K, H69K, L89M | CRF02_AG |
| | SP5-302731 | SP5-302731 | EU342789 | None | | | | I13V, L19P, K20I, E35D, M36I, R41K, L63P, H69K, L89M | CRF02_AG |
| | SP7-306121 | SP7-306121 | EU342791 | None | | | | I13V, I15V, K20I, E35D, M36I, R41K, H69K, L89M | CRF02_AG |
| | SP13-322971 | SP13-322971 | EU342796 | None | | | | I13V, I15V, K20I, E35D, M36I, R41K, H69K, L89M | CRF02_AG |
| | SP32-328001 | SP32-328001 | EU342805 | None | | | | I13V, K14R, K20I, E35D, M36I, R41K, L63P, H69K, I72L, L89M | CRF02_AG |
| Lloyd (2008) | CR150 | 03HN_CR150 | EU312709 | None | | | | I13IV, K14KR, E35D, R41K, L63P, K70R, V77L | CRF02_AG |
| McConnell (2008) | NV28 | NV28 | EU288113 | None | | | | I13V, K14R, K20I, E35D, M36I, R41K, L63P, H69K, V77VI, V82I, L89M | CRF02_AG |
| | NV37 | NV37 | EU288122 | None | | | | I13V, K14R, L19P, K20I, E35D, M36I, R41K, H69K, K70R, L89M | CRF02_AG |
| | NV45 | NV45 | EU288130 | None | | | | I13V, K14R, K20I, E35D, M36I, R41K, L63P, H69K, V77VI, V82I, L89M | CRF02_AG |
| Ndembi (2008) | CMYD-6 | 04CMYD-6 | DQ990381 | None | | | | I13V, K14R, K20I, E35D, M36I, R41K, I64M, H69K, L89M | CRF02_AG |
| | CMYD-11 | 04CMYD-11 | DQ990386 | None | | | | L10I, I13V, K14R, G16E, K20I, E35D, M36I, R41K, L63V, H69K, L89M | CRF02_AG |
| | CMYD-19 | 04CMYD-19 | DQ990392 | None | | | | I13V, I15V, K20I, E35D, M36I, R41K, I64M, H69K, L89M | CRF02_AG |
| | CMYD-38 | 04CMYD-38 | DQ990408 | None | | | | I13V, K14R, I15X, K20I, E35D, M36I, N37D, I64L, H69K, L89M | CRF02_AG |
| | CMYD-39 | 04CMYD-39 | DQ990409 | None | | | | T12K, I13V, K20I, E35D, M36I, R41K, H69K, K70R, L89M | CRF02_AG |
| | CMYD-44 | 04CMYD-44 | DQ990412 | None | | | | I13V, K14R, G16E, K20I, E35D, M36I, R41K, H69K, K70R, L89M | CRF02_AG |
| | CMYD-47 | 04CMYD-47 | DQ990414 | None | | | | I13V, K14R, K20I, E35D, M36I, R41K, H69K, L89M | CRF02_AG |
| | CMYD-49 | 04CMYD-49 | DQ990415 | None | | | | T12A, I13V, K14R, I15V, K20I, E35D, M36I, R41K, I64M, H69K, K70R, L89M | CRF02_AG |
| | CMYD-61 | 04CMYD-61 | DQ990425 | None | | | | I13V, K14R, G16X, K20I, E35D, M36I, N37D, I64L, H69K, L89M | CRF02_AG |
| | CMYD-69 | 04CMYD-69 | DQ990432 | None | | | | I13V, K14R, G16X, K20I, E35D, M36I, N37D, I64L, H69K, L89M | CRF02_AG |
| | CMYD-80 | 04CMYD-80 | DQ990440 | None | | | | I13V, K14R, G16X, K20I, E35D, M36I, R41K, L63P, H69K, L89M | CRF02_AG |
| | CMYD-86 | 04CMYD-86 | DQ990444 | None | | | | I13V, K14R, K20I, E35D, M36I, R41K, H69K, L89M | CRF02_AG |
| Ndembi (2008) | IAEM069 | IAEM069 | EU306788 | None | | | | I13V, L19I, E35D, M36I, R41K, K45R, R57K, L63P, I64L, H69K, L89M | CRF02_AG |
| Nyombi (2008) | TMS346 | TMS346 | EU251879 | None | | | | I13V, K14R, G16E, K20R, E35D, M36I, R41K, H69K, L89M | CRF02_AG |
| Palacios (2008) | 12599 | 12599 | | None | | | | I13V, K20I, E35D, M36I, R41K, L63P, H69K, L89M | CRF02_AG |
| | 12729 | 12729 | | None | | | | I13V, K20I, E35D, M36I, N37D, R41K, H69K, T74S, L89M | CRF02_AG |
| | 12835 | 12835 | | None | | | | I13V, K20I, E34Q, E35D, M36I, P39S, R41K, H69KN, K70KR, V82VI, L89M | CRF02_AG |
| Sirivichayakul (2008) | NBC-25 | NBC-25Pr | JQ364325 | None | | | | I13V, K14R, G16E, K20I, E35D, M36I, P39S, R41K, L63P, I64M, H69K, K70R, L89M | CRF02_AG |
| Sylla (2008) | D635 | D635_C1 | DQ991663 | None | | | | I13V, K14R, L19P, K20I, E35D, M36I, R41K, L63P, H69K, L89M | CRF02_AG |
| | | D635_C2 | EF588325 | None | | | | I13V, K14R, L19P, K20I, E35D, M36I, R41K, L63P, H69K, L89M | CRF02_AG |
| Aghokeng (2009) | CYV55 | CYV55 | GU191549 | None | | | | I13V, K14R, G16GE, L19I, K20I, E35D, M36I, R41K, H69K, L89M | CRF02_AG |
| | CYV61 | CYV61 | GU191550 | None | | | | L10I, I13V, K20I, E34A, E35D, R41K, H69K, L89M | CRF02_AG |
| | CYM004 | CYM004 | GU191554 | None | | | | I13V, L19P, K20I, E35D, M36I, N37D, L63P, H69K, L89M | CRF02_AG |
| | CYM003 | CYM003 | GU191556 | None | | | V11I | I13V, K14R, G16E, K20I, E35D, M36I, N37NS, P39PS, R41K, H69K, L89M | CRF02_AG |
| | CYN296 | CYN296 | GU191564 | None | | | | I13V, K14R, G17E, K20I, E35D, M36I, R41RK, L63LP, H69K, I72V, L89M | CRF02_AG |
| | CYM008 | CYM008 | GU191565 | None | | | | T12K, I13V, G16E, K20I, E35D, M36I, R41K, I64M, H69K, L89M | CRF02_AG |
| | CYR018 | CYR018 | GU191566 | None | | | | L10LI, T12K, I13V, K14R, G16E, K20I, E35D, M36I, R41K, H69K, L89M | CRF02_AG |
| | CYS050 | CYS050 | GU191568 | None | | | | T12A, I13V, K14R, G16E, K20I, E35D, M36I, R41K, H69K, V77VI, L89I | CRF02_AG |
| | CYM195 | CYM195 | GU191573 | None | | | | I13V, I15V, K20I, E34A, E35D, P39Q, R41K, I64M, H69K, V77I, L89M | CRF02_AG |
| | CYN433 | CYN433 | GU191574 | None | | | | I13V, K14R, I15L, K20I, E35D, M36I, R41K, H69K, L89M | CRF02_AG |
| | CYN1052 | CYN1052 | GU191596 | None | | | | I13V, K14R, K20I, E35D, M36I, N37S, R41K, H69K, L89M | CRF02_AG |
| | CDG77 | CDG77 | GU191609 | None | | | | I13V, K14R, K20I, E35D, M36I, R41K, H69K, K70R, L89M | CRF02_AG |
| | CDE77 | CDE77 | GU191616 | None | | | | I13A, K14R, G16E, K20I, E35D, M36I, R41K, H69K, L89M | CRF02_AG |
| | CDF0011 | CDF0011 | GU191622 | None | | | | T12I, I13V, K14R, G16E, K20I, E35D, M36I, R41K, L63H, C67CW, H69K, L89M | CRF02_AG |
| | CDC0014 | CDC0014 | GU191626 | None | | | | I13V, K14R, K20I, E35D, M36I, R41K, I64M, H69K, L89M | CRF02_AG |
| | CDE0042 | CDE0042 | GU191631 | None | | | | L10M, V11T, I13V, L19I, K20I, E35D, M36I, R41K, L63H, H69K, K70P, I72V, L89M | CRF02_AG |
| | CDF0013 | CDF0013 | GU191632 | None | | | | I13V, K14R, K20I, E35D, M36I, R41K, H69K, L89M | CRF02_AG |
| | DL0087 | DL0087 | GU191641 | None | | | | I13V, K20I, E35D, M36I, R41K, L63LP, H69K, I72E, L89M | CRF02_AG |
| | DG0405 | DG0405 | GU191645 | None | | | | Q7E, E35D, M36I, N37E, R41K, K43KQ, R57K, L63P, K70R | CRF02_AG |
| Ayouba (2009) | TE10100 | TE10100PR | GQ351705 | None | | | L33F | V11A, I13V, K14R, K20I, E35D, M36I, R41K, H69K, L89M | CRF02_AG |
| | TE10150 | TE10150PR | GQ351706 | None | | | | I13V, G16E, K20I, E35D, M36I, N37E, R41K, K43R, H69K, L89M | CRF02_AG |
| | RES620 | RES620PR | GQ351718 | None | | | | T12K, I13V, K14R, G16E, K20I, E35D, M36I, H69K, K70R, I72T, L89M | CRF02_AG |
| | RES642 | RES642PR | GQ351726 | None | | | | I13V, K14R, I15V, G17E, K20I, E35D, M36I, R41K, I64M, I66M, H69K, K70R, L89M | CRF02_AG |
| | RES020 | RES020-1PR | GQ351732 | None | | | | I13A, K14R, K20I, E35D, M36I, R41K, H69K, L89M | CRF02_AG |
| | RES028 | RES028-1PR | GQ351736 | None | | | | I13V, K14R, G17E, K20I, E35D, M36I, R41K, H69K, K70R, L89M | CRF02_AG |
| | RES250 | RES250-8PR | GQ351749 | None | | | | I13V, K14R, K20I, E35D, M36I, R41K, H69K, L89M | CRF02_AG |
| | 0.014 | 0.014-KPR | GQ351800 | None | | | | L10V, I13V, L19P, K20I, E35D, M36I, R41K, H69K, K70R, L89M | CRF02_AG |
| | 0.614 | 0.614-MPR | GQ351828 | None | | | | I13V, G16E, K20I, E35D, M36I, R41K, I64M, H69K, K70R, L89M | CRF02_AG |
| | 0.635 | 0.635-BPR | GQ351836 | None | | | | I13V, K14R, G16E, K20I, E35D, M36I, R41K, I64M, H69K, L89M | CRF02_AG |
| | 2906 | 2906HALDPR | GQ351968 | None | | | | I13V, K14R, L19P, K20I, E35D, M36I, N37S, R41K, H69K, L89M | CRF02_AG |
| | 2889 | 2889HALDPR | GQ351964 | None | | | | I13V, K14R, K20I, E35D, M36I, R41K, H69K, L89M | CRF02_AG |
| | 2897 | 2897HALDPR | GQ351950 | None | | | | L10I, I13V, E35D, M36I, R41K, H69K, L89M | CRF02_AG |
| | 2915 | 2915HALDprot | GQ351957 | None | | | | L10I, I13V, K14R, K20I, E35D, M36I, L38I, R41K, L63P, H69Q, L89M | CRF02_AG |
| Bartolo (2009) | CSE118 | 01AOCSE118 | EU068201 | None | | | V11I | L10I, I13V, I15V, G16E, K20I, E35D, M36I, N37K, R41K, L63T, H69Q, L89M, I93L | CRF02_AG |
| | HJM06 | 01AOHJM06 | EU068249 | None | | | | T12K, I13V, K14R, G16E, K20I, E35D, M36I, H69K, I72V, V77I, L89M | CRF02_AG |
| | HJM101 | 01AOHJM101 | EU068250 | None | | | | L10I, I13V, G16E, K20I, E35D, M36I, R41K, L63Q, H69Q, L89M | CRF02_AG |
| | LFA95 | 01AOLFA95 | EU068276 | None | | | | T12K, I13V, I15L, G16E, K20I, E35D, M36I, R41K, L63M, H69K, K70R, V77I, L89M | CRF02_AG |
| | SNS24 | 01AOSNS24 | EU068293 | None | | | | I13V, L19S, K20I, E35D, M36I, R41K, H69K, L89M | CRF02_AG |
| | SNS29 | 01AOSNS29 | EU068295 | None | | | | T12K, I13V, K14R, G16E, L19I, K20I, E35D, M36I, R41K, I64V, H69K, K70R, V77I, L89M | CRF02_AG |
| Brennan (2009) | A3 | ARC-A3 | EU711468 | None | | | | I13V, K14R, G16E, K20I, E35D, M36I, R41K, H69K, K70R, V77I, L89M | CRF02_AG |
| Brown (2009) | CAS_351_3_899 | CAS_351_3_899 | FJ030802 | None | | | | I13V, K14R, G17E, K20I, E35D, M36I, R41K, I64M, H69K, L89M | CRF02_AG |
| | CAS_1299_3_1611 | CAS_1299_3_1611 | FJ030673 | None | | | | I13V, K14R, G17E, K20I, E35D, M36I, R41K, I64L, H69K, K70R, L89M | CRF02_AG |
| | CAS_103_1_7756 | CAS_103_1_7756 | FJ030644 | None | | | | I13V, K14R, K20I, E35D, M36I, R41RK, K45KQ, L63P, C67Y, H69K, L89M | CRF02_AG |
| Cuevas (2009) | P0803 | P0803.1 | EU822516 | None | | | | I13V, K14R, G17E, K20I, E35D, M36I, N37K, R41K, H69K, K70KR, L89M | CRF02_AG |
| | P0812 | P0812.1 | EU822517 | None | | | | I13V, K14R, G17E, K20I, E35D, M36I, N37K, R41K, H69K, L89M | CRF02_AG |
| | P1174 | P1174.1 | EU822591 | None | | | | I13V, K14R, G16E, K20I, E35D, M36I, R41K, I64M, H69K, K70R, L89M | CRF02_AG |
| | P1234 | P1234.1 | EU822607 | None | | | | I13V, K14R, K20I, E35D, M36I, L38I, R41K, I64M, H69K, L89M | CRF02_AG |
| | P1261 | P1261.1 | EU822614 | None | | | V11I | I13V, K14R, G16E, K20I, E35D, M36I, R41K, H69K, K70KR, L89M | CRF02_AG |
| | P1568 | P1568.1 | EU822703 | None | | | | I13V, K14KR, Q18HR, L19I, K20I, E35D, M36I, R41K, L63P, H69K, L89M | CRF02_AG |
| | P1736 | P1736.1 | EU822764 | None | | | | I13V, K14R, G16E, K20I, E35D, M36I, R41K, H69K, L89M | CRF02_AG |
| | P0325 | P0325.2 | EU822775 | None | | | | I13V, K14R, G17E, K20I, E35D, M36I, N37K, R41K, H69K, L89M | CRF02_AG |
| | P0957 | P0957.1 | EU822783 | None | | | V11I | I13V, K14R, G16E, K20I, E35D, M36I, R41K, H69K, L89M | CRF02_AG |
| Hawkins (2009) | P964 | ZZP964 | FJ931177 | None | | | | I13V, K14R, G17E, K20I, E35D, M36I, R41K, L63LH, H69K, L89M | CRF02_AG |
| | Q134 | ZZQ134 | FJ931232 | None | | | | T12A, I13V, K14R, I15V, K20IV, E35D, M36I, N37D, R41K, K43R, L63HP, H69K, V82VI, L89M | CRF02_AG |
| | Q96 | ZZQ96 | FJ931235 | None | | | | I13V, K14R, I15V, K20I, E35D, M36I, R41K, H69K, K70R, V82I, L89M | CRF02_AG |
| | Q735 | ZZQ735 | FJ931245 | None | | | | L10I, I13V, K14R, L19P, K20I, E35D, M36I, R41K, L63HY, H69K, L89M | CRF02_AG |
| | R59 | ZZR59 | FJ931299 | None | | | | I13V, K14R, G16E, K20I, E35D, M36I, N37ND, R41K, L63LP, I64M, H69K, K70R, L89M | CRF02_AG |
| | R117 | ZZR117 | FJ931313 | None | | | | I13V, G16E, K20I, E35D, M36I, N37HY, R41K, K43R, H69K, K70KR, L89M | CRF02_AG |
| | Q595 | ZZQ595 | FJ931320 | None | | | | I13V, K20I, E35D, M36I, R41K, K43R, I62V, L63V, I64L, H69K, V82I, L89M | CRF02_AG |
| | Q949 | ZZQ949 | FJ931323 | None | | | | I13V, K20I, E35D, M36I, N37NK, R41H, D60E, L63P, H69K, L89M | CRF02_AG |
| | R132 | ZZR132 | FJ931328 | None | | | | I13V, G16E, K20I, E35D, M36I, R41K, I64M, H69K, K70R, I72T, L89M | CRF02_AG |
| | R146 | ZZR146 | FJ931329 | None | | | | I13V, K14R, G16E, K20I, E35D, M36I, R41K, K43R, I62IV, H69K, L89M | CRF02_AG |
| | R122 | ZZR122 | FJ931331 | None | | | | I13V, K14R, G16E, K20I, E35D, M36I, R41K, H69K, K70R, L89M | CRF02_AG |
| | R69 | ZZR69 | FJ931345 | None | | | | I13V, K14R, I15V, G17E, K20I, E35D, M36I, R41K, I64M, H69K, K70R, L89M | CRF02_AG |
| | Q994 | ZZQ994 | FJ931353 | None | | | | L10V, I13V, I15L, K20I, E35D, M36I, H69K, K70KR, I72IV, L89M | CRF02_AG |
| | R54 | ZZR54 | FJ931356 | None | | | | I13V, K14R, K20I, E35D, M36I, R41K, L63LP, I64V, H69K, L89M | CRF02_AG |
| | R109 | ZZR109 | FJ931359 | None | | | | I13A, K14R, K20M, A22V, E35D, M36I, R41K, L63T, I64V, H69K, K70R, L89M | CRF02_AG |
| | R23 | ZZR23 | FJ931363 | None | | | | I13V, K14R, G16E, K20I, E35D, M36I, R41K, H69K, L89M | CRF02_AG |
| | R350 | ZZR350 | FJ931377 | None | | | | I13V, K14R, I15V, G16E, K20I, E35D, M36I, R41K, I64M, H69K, I72V, L89M | CRF02_AG |
| | R223 | ZZR223 | FJ931382 | None | | | | T12K, I13V, K14R, G16E, K20I, E35D, M36I, R41K, H69K, I72V, L89M | CRF02_AG |
| | R224 | ZZR224 | FJ931383 | None | | | V11I | L10V, I13V, K14R, G16E, K20I, E35D, M36I, R41K, H69K, K70R, L89M | CRF02_AG |
| | R467 | ZZR467 | FJ931391 | None | | | | L10V, I13V, K14R, G16E, K20I, E35D, M36I, R41K, H69K, K70R, L89M | CRF02_AG |
| | R469 | ZZR469 | FJ931393 | None | | | | I13V, K14R, I15V, K20I, E35D, M36I, R41K, K43R, L63P, H69K, L89M | CRF02_AG |
| | R251 | ZZR251 | FJ931396 | None | | | | I13V, G16E, K20I, E35D, M36I, R41K, H69K, K70R, L89M | CRF02_AG |
| | R255 | ZZR255 | FJ931400 | None | | | | I13V, K20I, E35D, M36I, N37NS, R41K, H69K, L89M | CRF02_AG |
| | R372 | ZZR372 | FJ931410 | None | | | | I13V, K20I, E35D, M36I, H69K, V82I, L89M | CRF02_AG |
| | R374 | ZZR374 | FJ931411 | None | | | | I13V, K14R, K20I, E35D, M36I, N37E, L63P, H69K, V82VI, L89M | CRF02_AG |
| | R363 | ZZR363 | FJ931420 | None | | | | I13V, K14R, G17E, K20I, E35D, M36I, L63P, H69K, L89M | CRF02_AG |
| | R236 | ZZR236 | FJ931431 | None | | | | L10V, T12S, I13A, K14R, K20I, E35D, M36I, R41K, L63T, H69K, L89M | CRF02_AG |
| | R474 | ZZR474 | FJ931436 | None | | | | I13V, K14KR, G16E, K20I, E35D, M36I, R41K, H69K, V77I, L89M | CRF02_AG |
| Huang (2009) | Kita | BCF-Kita | FJ183726 | None | | | | I13V, K14R, K20I, E35D, M36I, R41K, H69K, L89M | CRF02_AG |
| Kousiappa (2009) | CY172 | CY172 | EU673404 | None | | | | I13V, K14KR, K20I, E35D, M36I, R41K, D60DE, C67CW, H69K, L89M | CRF02_AG |
| Koyalta (2009) | 4 | TCHAD-4 | FJ688174 | None | | | | I13V, K14R, G16E, L19V, K20I, E35D, M36I, R41K, K43R, H69K, L89M | CRF02_AG |
| Mintsa-Ndong (2009) | MKK106 | MKK106 | AM903424 | None | | | | T12Q, I13V, G17E, K20I, E35D, M36I, R41K, I64V, H69K, L89M | CRF02_AG |
| | MKK235 | MKK235 | AM903430 | None | | | | I13V, K14R, K20I, E35D, M36I, R41K, Q61H, L63HY, H69K, K70G, L89M | CRF02_AG |
| | MKK351 | MKK351 | AM903435 | None | | | | I13V, L19I, K20I, E35D, M36I, R41K, H69K, L89M | CRF02_AG |
| Tebit (2009) | TR83 | TR83 | FJ577278 | None | | | | I13V, G16E, K20I, E35D, M36I, R41K, I64L, H69K, K70R, L89M | CRF02_AG |
| | TR92 | TR92 | FJ577280 | None | | | | T12A, I13V, K14R, I15V, G17E, K20I, E35D, M36I, N37D, L63P, I64M, H69K, L89M | CRF02_AG |
| | TR146 | TR146 | FJ577300 | None | | | | I13V, K14R, Q18P, K20I, E21K, E35D, M36I, R41K, I62V, L63H, G68E, H69N, L89I | CRF02_AG |
| | TR161 | TR161 | FJ577311 | None | | | | I13V, K14R, I15V, K20I, E35D, M36I, R41K, R57K, H69K, K70R, T74S, L89M | CRF02_AG |
| | TR162 | TR162 | FJ577312 | None | | | | I13V, K14R, K20I, E35D, M36I, R41K, K43R, H69K, L89M | CRF02_AG |
| | TR241 | TR241 | FJ577353 | None | | | | I13V, K14R, G16E, L19P, K20I, E35D, M36I, N37S, R41K, L63H, H69K, L89I | CRF02_AG |
| Vercauteren (2009) | pt2160 | 249548411 | GQ398864 | None | | | | I13V, K14R, I15IV, G17D, K20I, E35D, M36I, R41K, I64M, H69K, K70KR, L89M | CRF02_AG |
| | pt2125 | 541437409 | GQ398899 | None | | | | L10I, I13V, G16E, K20I, E35D, M36I, R41K, I62K, H69K, L89M | CRF02_AG |
| | pt2086 | 792926165 | GQ398938 | None | | | | I13V, K14R, G17E, K20I, E35D, M36I, R41K, I64M, H69K, K70R, L89M | CRF02_AG |
| | pt2040 | 1040574839 | GQ398984 | None | | | | I13V, K14R, K20I, E35D, M36I, R41K, H69K, L89M | CRF02_AG |
| | pt2022 | 1210645106 | GQ399002 | None | | | | I13V, K14KR, G17E, K20I, E35D, M36I, N37S, R41K, K43R, L63LP, H69K, L89M | CRF02_AG |
| | pt1937 | 1643423983 | GQ399087 | None | | | | I13V, K20I, E35D, M36I, P39PS, R41K, L63P, H69K, L89M | CRF02_AG |
| | pt1825 | 2365124143 | GQ399199 | None | | | | I13V, K14R, G16E, K20I, E35D, M36I, R41K, H69K, V77VI, L89M | CRF02_AG |
| | pt1743 | 2936764109 | GQ399281 | None | | | | I13V, K14R, Q18L, K20I, E35D, M36I, R41K, H69K, L89M | CRF02_AG |
| | pt1619 | 3635160656 | GQ399405 | None | | | | T12TAIV, I13V, K14KR, G16GE, K20I, E35D, M36I, R41K, R57K, I64M, H69K, L89M | CRF02_AG |
| | pt1584 | 3852420844 | GQ399440 | None | | | | I13V, K14R, K20I, E35D, M36I, L63S, I64M, H69K, L89M | CRF02_AG |
| | pt1581 | 3860898215 | GQ399443 | None | | | | I13V, K14R, G17E, K20I, E35D, M36I, R41K, I64M, H69K, K70R, L89M | CRF02_AG |
| | pt1553 | 399KKvlJPJ | GQ399471 | None | | | | I13V, K14R, K20I, E35D, M36I, L38I, R41K, L63P, H69K, L89M | CRF02_AG |
| | pt1552 | 3e5qec4q6z | GQ399472 | None | | | | T12A, I13V, K14R, G16E, K20I, E35D, M36I, R41K, H69K, K70KR, L89M | CRF02_AG |
| | pt1496 | 4290968868 | GQ399528 | None | | | | I13V, K14R, I15V, K20I, E35D, M36I, R41K, I64ILM, E65ED, H69K, K70KR, L89M | CRF02_AG |
| | pt1455 | 4537181593 | GQ399569 | None | | | | L10LV, I13V, K14KR, G16GE, K20I, E35D, M36I, R41K, L63P, H69K, K70R, L89M | CRF02_AG |
| | pt1289 | 5461668210 | GQ399735 | None | | | | I13V, K14KR, I15V, K20I, E35D, M36I, R41K, I64M, H69K, K70R, L89M | CRF02_AG |
| | pt1247 | 5719306933 | GQ399777 | None | | | | I13V, I15L, G16E, K20I, E35D, M36I, R41K, L63LHP, I64L, H69K, K70KR, L89M | CRF02_AG |
| | pt1168 | 6167161544 | GQ399856 | None | | | | I13V, K14R, K20I, E35D, M36I, R41K, I64M, L89M | CRF02_AG |
| | pt1013 | 7129284619 | GQ400011 | None | | | | I13V, K14R, G16E, L19I, K20I, E35D, M36I, R41K, I64M, H69K, K70R, L89M | CRF02_AG |
| | pt882 | 7920629306 | GQ400142 | None | | | | I13V, K14R, K20I, E35D, M36I, R41K, H69K, L89M | CRF02_AG |
| | pt817 | 8297765957 | GQ400207 | None | | | | I13V, K14R, K20I, E35D, M36I, N37NS, R41K, H69K, K70R, V77I, V82VI, L89M | CRF02_AG |
| | pt785 | 8460143385 | GQ400239 | None | | | | V11VG, I13V, K14R, G16E, K20I, E35D, M36I, R41K, L63S, H69K, K70R, L89M | CRF02_AG |
| | pt776 | 8520746380 | GQ400248 | None | | | | T12P, I13V, K14R, G16E, K20I, E35D, M36I, R41K, L63H, G68E, H69R, L89M | CRF02_AG |
| | pt661 | 9050036940 | GQ400363 | None | | | | I13V, K14KR, K20I, E35D, M36I, R41K, K45R, L63A, H69K, K70R, V82VI, L89M | CRF02_AG |
| | pt633 | 9242133246 | GQ400391 | None | | | | I13V, K14R, K20I, E35D, M36I, N37D, R41K, H69K, T74S, L89M | CRF02_AG |
| | pt602 | 9374512131 | GQ400422 | None | | | | I13V, K14R, G16E, K20I, E35D, M36I, R41K, H69K, K70R, V77I, L89M | CRF02_AG |
| | pt365 | hk3n5YopRJ | GQ400659 | None | | | | I13A, K14R, K20I, E35D, M36I, N37D, R41K, L63P, H69K, L89M | CRF02_AG |
| | pt296 | LbCZxpzfm9 | GQ400728 | None | | | | I13V, K20I, E35D, M36I, R41K, L63LP, I64IM, H69K, L89M | CRF02_AG |
| Yaotse (2009) | HT044 | 06TG.HT044 | FM955685 | None | | | | I13V, K14R, G16E, K20I, E35D, M36I, R41K, H69K, K70R, L89M | CRF02_AG |
| | HT048 | 06TG.HT048 | FM955688 | None | | | | T12A, I13V, K14R, L19I, K20I, E35D, M36I, R41K, L63P, H69K, L89M | CRF02_AG |
| | HT050 | 06TG.HT050 | FM955689 | None | | | | I13A, K14R, L19S, K20I, A22V, E35D, M36I, R41K, L63H, H69K, K70R, L89I | CRF02_AG |
| | HT060 | 06TG.HT060 | FM955696 | None | | | | I13V, K14R, K20I, E35D, M36I, R41K, H69K, L89M | CRF02_AG |
| | HT066 | 06TG.HT066 | FM955701 | None | | | I84L | I13V, K14R, G16E, K20I, E35D, M36I, R41K, H69K, I72V, L89M | CRF02_AG |
| | HT073 | 06TG.HT073 | FM955707 | None | | | | T12A, I13V, K14R, G16E, K20I, E35D, M36I, R41K, I64M, H69K, L89M | CRF02_AG |
| | HT076 | 06TG.HT076 | FM955709 | None | | | | I13A, K14R, L19P, K20I, E35D, M36I, R41K, L63P, H69K, K70R, L89I | CRF02_AG |
| | HT083 | 06TG.HT083 | FM955713 | None | | | | I13V, G16E, K20I, E35D, M36I, R41K, L63A, H69K, L89M | CRF02_AG |
| | HT090 | 06TG.HT090 | FM955718 | None | | | | L10V, I13V, I15V, G16E, K20I, E35D, M36I, P39L, R41K, I64M, H69K, K70R, L89M | CRF02_AG |
| | HT117 | 06TG.HT117 | FM955722 | None | | | | T12A, I13V, K14R, G16E, K20I, E35D, M36I, R41K, R57K, L63P, H69K, K70R, L89M | CRF02_AG |
| | HT127 | 06TG.HT127 | FM955727 | None | | | | L10I, I13V, K14R, I15V, K20I, E35D, M36I, R41K, L63S, C67Y, G68D, H69K, K70R, L89M | CRF02_AG |
| | HT128 | 06TG.HT128 | FM955728 | None | | | | I13V, I15V, K20I, E35D, M36I, L63P, I64L, H69K, L89M | CRF02_AG |
| | HT155 | 06TG.HT155 | FM955742 | None | | | | I13V, K14R, K20I, E35D, M36I, N37E, R41K, L63P, H69K, K70R, V75I, L89M | CRF02_AG |
| | HT157 | 06TG.HT157 | FM955744 | None | | | | I13V, K14R, K20I, E35D, M36I, R41K, D60E, L63P, H69K, T74S, V77I, L89M | CRF02_AG |
| | HT161 | 06TG.HT161 | FM955745 | None | | | | I13V, G16E, K20I, E35D, M36I, R41K, I64M, H69K, K70R, L89M | CRF02_AG |
| | HT181 | 06TG.HT181 | FM955748 | None | | | V32VL | I13V, I15V, K20I, E35D, M36I, R41K, I64M, H69K, K70R, L89M | CRF02_AG |
| | HT211 | 06TG.HT211 | FM955750 | None | | | | I13V, K14R, G16E, K20I, E35D, M36I, R41K, R57K, I64M, H69K, K70R, L89M | CRF02_AG |
| Yebra (2009) | SP3-260414 | SP3-260414 | EU255307 | None | | | | I13V, K14R, K20I, E35D, M36I, R41K, H69K, L89M | CRF02_AG |
| | SP3-302731 | SP3-302731 | EU255376 | None | | | | I13V, L19P, K20I, E35D, M36I, R41K, L63P, H69K, L89M | CRF02_AG |
| | SP122-30612 | SP122-30612 | EU255468 | None | | | | I13V, I15V, K20I, E35D, M36I, R41K, H69K, I72IM, L89M | CRF02_AG |
| | SP39-367857 | SP39-367857 | EU255524 | None | | | | I13V, K14R, K20I, E35D, M36I, R41K, H69K, L89M | CRF02_AG |
| | SP52-367860 | SP52-367860 | EU342810 | None | | | | I13V, K14R, K20I, E35D, M36I, R41K, H69K, L89M | CRF02_AG |
| | SP68-384383 | SP68-384383 | EU362923 | None | | | | I13V, K20I, E35D, M36I, R41K, H69K, L89M | CRF02_AG |
| | SP78-400723 | SP78-400723 | EU362928 | None | | | | I13V, K20I, E35D, M36I, R41K, L63T, I64M, H69K, L89M | CRF02_AG |
| Bonura (2010) | 1214_102 | 1214_102 | GU969558 | None | | | | L10LV, I13V, K14KR, G16E, K20I, E35D, M36I, R41K, H69K, K70KR, L89M | CRF02_AG |
| Brennan (2010) | ARC-A59 | ARC-A59 | GU565657 | None | | | | I13V, K14R, G16GE, K20I, E35D, M36I, R41K, H69K, L89M | CRF02_AG |
| Carr (2010) | 0186BA | 01CM.0186BA | GU201500 | None | | | | I13V, G16E, K20I, E35D, M36I, R41K, I64M, H69K, K70R, L89M | CRF02_AG |
| | 3217MN | 02CM.3217MN | GU201514 | None | | | V11I | L10V, I13A, G16E, K20I, E35D, M36I, R41K, H69K, K70R, L89M | CRF02_AG |
| Castelbranco (2010) | 090032A | 090032A | HM357736 | None | | | | I13V, G16E, K20I, E35D, M36I, R41K, D60E, H69K, K70R, V77I, L89M | CRF02_AG |
| Castro (2010) | PHI-14 | PHI-14 | GQ131609 | None | | | | T12Q, I13V, K14R, K20I, E35D, M36I, L63P, I64L, H69K, L89M | CRF02_AG |
| | PHI-7 | PHI-7 | GQ131602 | None | | | | T12Q, I13V, K14R, I15V, K20I, E35D, M36I, P39L, L63P, I64L, H69K, L89M | CRF02_AG |
| Chin (2010) | K024 | K024 | GQ290726 | None | | | | I13V, K14R, G16E, K20I, E35D, M36I, N37D, R41K, H69K, K70R, L89M | CRF02_AG |
| Diop-Ndiaye (2010) | 57HALD | 57HALD | FN599724 | None | | | V11I | L10V, I13V, K14R, G16E, K20I, E35D, M36I, R41K, H69K, K70R, L89M | CRF02_AG |
| | L117 | L117 | FN599729 | None | | | | I13V, K14R, G16E, K20I, E35D, M36I, R41K, H69K, L89M | CRF02_AG |
| | L009 | L009 | FN599732 | None | | | | L10V, I13V, K14R, L19P, K20I, E35D, M36I, R41K, H69K, K70R, L89M | CRF02_AG |
| | 877hald | 877hald | FN599749 | None | | | | I13V, G16E, K20I, E35D, M36I, N37K, R41K, I64M, H69K, L89M | CRF02_AG |
| | 927hald | 927hald | FN599760 | None | | | | I13V, K14R, G16E, K20I, E35D, M36I, H69K, L89M | CRF02_AG |
| | 961HALD | 961HALD | FN599771 | None | | | | I13V, K14R, K20IT, E35D, M36I, R41K, H69K, L89M | CRF02_AG |
| | 979hald | 979hald | FN599775 | None | | | | I13V, E35D, M36I, R41K, H69K, L89M | CRF02_AG |
| | 995-hald | 995-hald | FN599778 | None | | | | I13V, K14KR, K20I, E35D, M36I, P39S, R41K, H69K, K70KR, V82I, L89M | CRF02_AG |
| | 1011hald | 1011hald | FN599779 | None | | | | I13V, K14R, G16E, K20I, E35D, M36I, R41K, H69K, L89M | CRF02_AG |
| | 1724-hald | 1724-hald | FN599790 | None | | | | I13V, K14R, G16E, K20I, E35D, M36I, R41K, I64M, H69K, L89M | CRF02_AG |
| | 102515 | 102515 | FN599796 | None | | | | I13V, K20I, E35D, M36I, R41K, H69K, L89M | CRF02_AG |
| Djoko (2010) | 666 | CD2865 | FR666666 | None | | | | L10V, I13V, G16GE, L19LP, K20I, E35D, M36I, R41RK, H69K, L89M | CRF02_AG |
| | 679 | CD0479 | FR666679 | None | | | | I13V, K14R, K20I, E35D, M36I, R41K, H69K, L89M | CRF02_AG |
| Djoko (2010) | GQ166 | 08GQ166 | FN557303 | None | | | | L10V, I13V, K14R, G16E, K20I, E35D, M36I, R41K, C67Y, H69K, K70R, V77I, L89M | CRF02_AG |
| | GQ392 | 08GQ392 | FN557315 | None | | | | I13V, K14KR, L19P, K20I, E35D, M36I, R41K, L63P, H69K, L89M | CRF02_AG |
| | GQ203 | 08GQ203 | FN557316 | None | | | | L10V, I13V, K14R, K20I, E35D, M36I, R41K, H69K, K70KR, L89M | CRF02_AG |
| | GQ032 | 08GQ032 | FN557317 | None | | | | I13V, K14R, G16E, L19I, K20I, E35D, M36I, R41K, H69K, L89M | CRF02_AG |
| | GQ342 | 08GQ342 | FN557318 | None | | | | I13V, K14R, G16GE, K20I, E35D, M36I, R41K, H69K, L89M | CRF02_AG |
| | GQ200 | 08GQ200 | FN557319 | None | | | | I13V, K14R, G16E, K20I, E35D, M36I, R41K, H69K, V77I, L89M | CRF02_AG |
| | GQ433 | 08GQ433 | FN557321 | None | | | | I13V, L19LS, K20I, E35D, M36I, R41K, L63S, I64L, H69K, I72M, L89M | CRF02_AG |
| | GQ239 | 08GQ239 | FN557325 | None | | | | I13V, K14R, K20I, E35D, M36I, R41K, H69K, L89M | CRF02_AG |
| | GQ385 | 08GQ385 | FN557326 | None | | | | I13V, K14R, G16GE, K20I, E35D, M36I, R41K, L63P, H69K, L89M | CRF02_AG |
| Germanaud (2010) | 5578 | 5578 | | None | | | | I13V, G16E, K20I, E35D, M36I, R41K, H69K, L89M | CRF02_AG |
| Soares (2010) | CM02_014 | CM02_014 | GU366105 | None | | | | L10V, I13V, I15V, G16E, K20I, E35D, M36I, R41K, H69K, K70R, L89M | CRF02_AG |
| | CM04_069 | CM04_069 | GU366117 | None | | | | T12A, I13V, K14R, I15V, K20I, E35D, M36I, N37E, R41K, I64M, H69K, L89M | CRF02_AG |
| | CM04_076 | CM04_076 | GU366119 | None | | | | I13V, K14R, G16E, K20I, E35D, M36I, R41K, H69K, K70R, L89M | CRF02_AG |
| | CM04_099 | CM04_099 | GU366129 | None | | | | I13V, K14R, K20I, E35D, M36I, N37D, R41K, H69K, L89M | CRF02_AG |
| | CM05_104 | CM05_104 | GU366130 | None | | | | I13V, K14R, I15V, K20I, E35D, M36I, R41K, L63P, H69K, L89M | CRF02_AG |
| | CM04_083 | CM04_083 | GU366133 | None | | | | T12K, I13V, K14R, I15V, K20I, E35D, M36I, R41K, L63P, H69K, L89M | CRF02_AG |
| Yang (2010) | 2010693443 | 2010693443 | JQ616883 | None | | | | T12D, I13V, K14R, G16E, K20I, E35D, M36I, L63H, I64V, H69K, V77I, L89M | CRF02_AG |
| | 2010693445 | 2010693445 | JQ616885 | None | | | | L10V, I13V, G16E, L19P, K20I, E35D, M36I, R41K, H69K, L89M | CRF02_AG |
| | 2010693465 | 2010693465 | JQ616897 | None | | | | K20I, E35D, M36I, R41K, H69K, I72M, L89M | CRF02_AG |
| | 2010693470 | 2010693470 | JQ616898 | None | | | | E35D, M36I, N37S, R41K, H69K, L89M | CRF02_AG |
| | 2010693474 | 2010693474 | JQ616900 | None | | | V11I | L10I, T12Q, I13V, K14KR, I15V, L19P, K20I, E35D, M36I, R41K, L63T, H69K, L89M | CRF02_AG |
| | 2010693447 | 2010693447 | JQ616907 | None | | | | I13V, G16E, L19Q, K20I, E35D, M36I, R41K, L63H, H69K, K70R, I72M, V77I, L89M | CRF02_AG |
| | 2010693466 | 2010693466 | JQ616910 | None | | | | L10I, I13V, G16E, K20I, E35D, M36I, R41K, C67Y, H69K, L89M | CRF02_AG |
| Yebra (2010) | 1013543 | 99SP01013543 | FJ481693 | None | | | | L10I, I13V, K14R, L19P, K20I, E35D, M36I, R41K, L63P, H69K, K70R, L89M | CRF02_AG |
| | 302050 | 06SP302050 | FJ481694 | None | | | | I13V, K14R, K20I, E35D, M36I, R41K, H69K, K70R, L89M | CRF02_AG |
| | 138418 | 03SP00138418 | FJ481697 | None | | | | I13V, K14R, G17E, K20I, E35D, M36I, N37S, H69K, I72V, L89M | CRF02_AG |
| | 256088 | 05SP0256088 | FJ481702 | None | | | | I13V, L19P, K20I, E35D, M36I, R41K, H69K, K70R, L89M | CRF02_AG |
| Aghokeng (2011) | HJ1948 | HJ1948 | JN639456 | None | | | | I13V, K14R, G16E, K20I, E35D, M36I, R41K, I64M, H69K, L89M | CRF02_AG |
| | HJ1809 | HJ1809 | JN639466 | None | | | | L10LIV, T12K, I13V, K14R, G16E, L19LI, K20I, E21ED, E35D, M36I, R41K, H69K, L89M | CRF02_AG |
| | HJ1952 | HJ1952 | JN639467 | None | | | | T12TA, I13V, K14R, I15V, K20I, E35D, M36I, R41K, H69K, V82I, L89M | CRF02_AG |
| | HJ2080 | HJ2080 | JN639473 | None | | | | I13V, K14KR, K20I, E35D, M36I, N37S, R41K, H69K, L89M | CRF02_AG |
| | HJ1784 | HJ1784 | JN639474 | None | | | | T12K, I13V, K14R, G16E, K20I, E35D, M36I, R41K, I64L, H69K, V75VG, L89IM | CRF02_AG |
| | HJ1627 | HJ1627 | JN639478 | None | | | | L10V, T12K, I13A, K14R, K20I, E35D, M36I, N37E, R41K, L63LIM, H69K, L89M | CRF02_AG |
| | HJ2025 | HJ2025 | JN639481 | None | | | | I13V, K14R, I15V, K20I, E35D, M36I, N37D, R41K, I64M, H69K, K70KR, L89M | CRF02_AG |
| | HJ1807 | HJ1807 | JN639482 | None | | | | I13V, K20I, E35D, M36I, P39Q, R41K, H69K, T74S, L89M | CRF02_AG |
| | HJ1694 | HJ1694 | JN639484 | None | | | | L10LI, I13V, L19LP, K20I, E35D, M36I, R41K, K43KR, L63LP, I64IM, H69R, V77VI, L89M | CRF02_AG |
| | HJ1446 | HJ1446 | JN639495 | None | | | | I13A, K14R, K20I, E35D, M36I, R41K, H69K, K70KR, V82VI, L89M | CRF02_AG |
| | HJ2079 | HJ2079 | JN639501 | None | | | | I13V, G16E, K20I, E35D, M36I, R41K, K43R, H69K, K70R, L89M | CRF02_AG |
| | HJ1892 | HJ1892 | JN639504 | None | | | | I13V, K14KR, L19LI, K20I, E35D, M36I, R41K, R57RK, H69K, T74TS, L89M | CRF02_AG |
| | HJ1688 | HJ1688 | JN639506 | None | | | | L10LV, I13V, K14R, G16GE, L19LP, K20I, E35D, M36I, N37NDEK, L63LP, H69K, K70KQ, L89M | CRF02_AG |
| | HJ1685 | HJ1685 | JN639507 | None | | | | L10LV, I13AV, K14R, I15V, K20I, E35D, M36I, R41K, L63P, H69K, L89M | CRF02_AG |
| | HJ1786 | HJ1786 | JN639509 | None | | | | I13V, G16E, K20I, E35D, M36I, R41K, H69K, K70KR, I72T, L89M | CRF02_AG |
| | HJ1884 | HJ1884 | JN639510 | None | | | | I13V, K20I, E35D, M36I, P39PS, R41K, L63HP, H69K, K70KR, L89M | CRF02_AG |
| | SK8033-PI | SK8033-PI | HQ864346 | None | | | V11I, L33F | T12K, I13V, K14KR, K20I, E35D, M36I, R41K, H69K, K70R, L89M | CRF02_AG |
| | SK5026-PI | SK5026-PI | HQ864349 | None | | | | L10I, I13V, K14R, L19LP, K20I, E35D, M36I, R41K, I64IV, H69KQ, K70R, L89M | CRF02_AG |
| | SK6007-PI | SK6007-PI | HQ864350 | None | | | | L10I, V11T, I13V, I15IV, K20I, E35D, M36I, R41K, L63LP, H69K, L89M | CRF02_AG |
| | SK3036-PI | SK3036-PI | HQ864366 | None | | | | I13V, K14R, K20I, E35D, M36I, R41K, D60E, C67E, H69R, I72IV, L89M | CRF02_AG |
| | SK7012-PI | SK7012-PI | HQ864372 | None | | | | L10V, I13V, K20I, E34Q, E35D, M36I, N37D, P39S, H69K, L89M | CRF02_AG |
| | SK1004-PI | SK1004-PI | HQ864374 | None | | | | I13V, K14R, K20I, E35D, M36I, R41K, K45KR, I64IM, H69K, K70KR, L89M | CRF02_AG |
| | SK8013-PI | SK8013-PI | HQ864389 | None | | | | I13V, K14R, K20I, E35D, M36I, R41K, H69K, T74S, L89M | CRF02_AG |
| | SK2025-PI | SK2025-PI | HQ864393 | None | | | | L10V, T12K, I13V, I15V, L19P, K20I, E35D, M36I, R41K, L63P, H69K, K70KR, L89M | CRF02_AG |
| | SK1023-PI | SK1023-PI | HQ864404 | None | | | | I13V, G17E, K20I, E35D, M36I, N37D, L63HP, H69K, L89M | CRF02_AG |
| | SK4047-PI | SK4047-PI | HQ864406 | None | | | | L10LV, I13V, K14R, G16E, K20I, E35D, M36I, R41K, L63LP, I64IM, H69K, K70R, V82VI, L89M | CRF02_AG |
| | SK6042-PI | SK6042-PI | HQ864411 | None | | | | I13V, K14R, G16E, K20I, E35D, M36I, R41K, H69K, L89M | CRF02_AG |
| | SK3026-PI | SK3026-PI | HQ864414 | None | | | | L10LV, I13V, K14KR, G16E, K20I, E35D, M36I, R41K, H69K, K70R, L89M | CRF02_AG |
| | SK1013-PI | SK1013-PI | HQ864417 | None | | | | I13V, K14R, G16E, K20I, E35D, M36I, R41K, H69K, K70R, L89M | CRF02_AG |
| | SK5025-PI | SK5025-PI | HQ864419 | None | | | | I13V, K14R, I15IV, K20I, E35D, M36I, R41K, H69K, L89M | CRF02_AG |
| | SK6014-PI | SK6014-PI | HQ864423 | None | | | | I13V, L19P, K20I, E35D, M36I, R41K, H69K, L89M | CRF02_AG |
| | SK9006-PI | SK9006-PI | HQ864426 | None | | | | I13AV, K14R, K20I, E35D, M36I, R41K, L63LP, H69K, K70KR, V82VI, L89M | CRF02_AG |
| | SK4040-PI | SK4040-PI | HQ864428 | None | | | | I13A, G16GE, K20I, E35D, M36I, R41K, L63LHP, H69K, K70R, I72IV, L89M | CRF02_AG |
| | SK7001-PI | SK7001-PI | HQ864434 | None | | | | L10V, T12K, I13V, K14R, G16E, K20I, E35D, M36I, N37NS, R41K, C67CY, H69K, L89M | CRF02_AG |
| | SK2028-PI | SK2028-PI | HQ864441 | None | | | | L10LV, I13V, K14KR, I15IV, K20M, E35D, M36I, R41K, I62IV, L63X, I64IM, H69K, T74S, L89M | CRF02_AG |
| | SK6059-PI | SK6059-PI | HQ864452 | None | | | V11VI | I13V, K14KR, I15IL, K20I, E35D, M36I, R41K, L63LFPS, H69K, L89M | CRF02_AG |
| | SK8041-PI | SK8041-PI | HQ864453 | None | | | | I13V, K14R, G16GE, L19LI, K20I, E35D, M36I, R41K, L63LV, I64M, H69K, K70KR, L89M | CRF02_AG |
| Aghokeng (2011) | SK6040-M24 | SK6040-M24 | HQ864464 | None | | | L33I | I13V, K14R, K20L, E35D, M36I, P39PT, R41K, L63P, H69K, K70KR, I72L, R87RG, L89I | CRF02_AG |
| Avi (2011) | 077u | 077u | GQ926639 | None | | | | I13V, K14R, K20I, E35D, M36I, R41K, L63S, H69K, K70R, V82I, L89M | CRF02_AG |
| | 085u | 085u | GQ926648 | None | | | | I13V, K14R, K20I, E35D, M36I, R41K, L63ST, H69K, K70R, V82I, L89M | CRF02_AG |
| | 133u | 133u | GQ926681 | None | | | | I13V, K14R, K20I, E35D, M36I, R41K, L63AS, H69K, K70R, V82I, L89M | CRF02_AG |
| | 144u | 144u | GQ926690 | None | | | | I13V, K14R, G17E, K20I, E35D, M36I, R41K, I64M, H69K, I72T, L89M | CRF02_AG |
| Charpentier (2011) | 35 | CP 001 2127 | | None | | | | I13V, K14KR, K20I, E35D, M36I, N37ND, R41K, L63S, I64L, H69K, K70R, I72L, L89M | CRF02_AG |
| | 58 | CP 001 381 | | None | | | | I13V, K14K*, G17E, L19S, K20I, E35D, M36I, R41K, I62V, L63R, I64M, H69K, L89M | CRF02_AG |
| Dagnra (2011) | 08TG.T3034 | 08TG.T3034 | FR715250 | None | | | | T12A, I13V, K14R, I15V, K20I, E35D, M36I, R41K, R57K, L63P, I64L, H69K, L89M | CRF02_AG |
| | 08TG.T3043 | 08TG.T3043 | FR715260 | None | | | | I13V, I15IV, K20I, E35D, M36I, R41K, I64M, H69K, V82I, L89M | CRF02_AG |
| | 08TG.T3061 | 08TG.T3061 | FR715264 | None | | | | I13V, K14R, L19P, K20I, E35D, M36I, R41K, H69K, L89M | CRF02_AG |
| | 08TG.E5017 | 08TG.E5017 | FR715273 | None | | | | I13V, K14R, Q18R, K20I, E35D, M36I, N37S, R41K, H69K, L89M | CRF02_AG |
| | 08TG.E5020 | 08TG.E5020 | FR715274 | None | | | | L10V, I13V, K14R, I15V, G16E, L19P, K20I, E35D, M36I, P39Q, R41K, L63H, H69K, L89M | CRF02_AG |
| | 08TG.E5043 | 08TG.E5043 | FR715279 | None | | | | I13V, K14R, Q18R, K20I, E35D, M36I, N37S, R41K, H69K, L89M | CRF02_AG |
| | 08TG.C7003 | 08TG.C7003 | FR715286 | None | | | | I13V, G16E, K20I, E35D, M36I, R41K, I64M, H69K, K70R, L89M | CRF02_AG |
| | 08TG.C7017 | 08TG.C7017 | FR715289 | None | | | | I13V, K14R, G16E, K20I, E35D, M36I, R41K, H69K, K70R, V77I, L89M | CRF02_AG |
| | 08TG.C7023 | 08TG.C7023 | FR715291 | None | | | | L10LV, I13V, K14R, L19P, K20I, E35D, M36I, R41K, H69K, K70KR, L89M | CRF02_AG |
| El Annaz (2011) | 1633 | 1633 | HQ393249 | None | | | | T12S, I13V, K14R, G17E, K20I, E35D, M36I, N37K, R41K, H69K, L89M | CRF02_AG |
| | 3743 | 3743 | HQ393256 | None | | | | T12S, I13V, K14R, G16GE, K20I, E35D, M36I, N37K, R41K, H69K, L89M | CRF02_AG |
| | 4758 | 4758 | HQ393261 | None | | | | T12S, I13V, K14R, G16GE, K20I, E35D, M36I, N37K, R41K, H69K, L89M | CRF02_AG |
| | 5415 | 5415 | HQ393266 | None | | | L33LI | I13V, K14R, K20I, E35D, M36I, R41K, H69K, L89M | CRF02_AG |
| | 7091 | 7091 | HQ393279 | None | | | | T12S, I13V, K14R, K20I, E35D, M36I, N37K, R41K, H69K, L89M | CRF02_AG |
| | 10458 | 10458 | HQ393301 | None | | | | T12K, I13V, K14R, G16GE, G17E, K20I, E35D, M36I, R41K, H69K, K70R, L89M | CRF02_AG |
| | 17322 | 17322 | HQ393322 | None | | | | I13V, K14R, K20I, E35D, M36I, R41K, H69K, L89M | CRF02_AG |
| Fokam (2011) | CIRCB-10351 | CIRCB-10351 | JQ796109 | None | | | | L10I, I13V, K20I, E35D, M36I, R41K, H69Q, L89M | CRF02_AG |
| | CIRCB-10695 | CIRCB-10695 | JQ796112 | None | | | | T12K, I13V, K14R, G16GE, L19I, K20I, E35D, M36I, N37S, R41K, L63I, I64M, H69K, L89M | CRF02_AG |
| | CIRCB-12162 | CIRCB-12162 | JQ796139 | None | | | | I13V, G16E, K20I, E35D, M36I, R41K, H69K, K70KR, L89M | CRF02_AG |
| | CIRCB-1641 | CIRCB-1641 | JQ796145 | None | | | | V11VF, I13V, K14IR, K20I, E35D, M36I, R41K, I64M, H69K, L89M | CRF02_AG |
| | CIRCB-3379 | CIRCB-3379 | JQ796148 | None | | | | T12V, I13V, G16M, K20I, E35D, M36I, R41K, L63LP, H69K, L89M | CRF02_AG |
| | CIRCB-7815 | CIRCB-7815 | JQ796154 | None | | | | I13V, K14KR, G16GE, K20I, E35D, M36I, R41K, K43KR, H69K, K70KR, L89M, I93IM | CRF02_AG |
| | CRICB-9078 | CIRCB-9078 | JQ796157 | None | | | V11VI | L10M, I13V, K14KR, I15IV, L19P, K20I, E35D, M36I, R41K, L63LP, H69K, L89I | CRF02_AG |
| | CIRCB-10124 | CIRCB-10124 | JQ796164 | None | | | | L10LV, T12A, I13V, I15V, K20I, E35D, M36I, R41K, K43R, Q61H, L63P, G68E, H69R, K70R, L89M | CRF02_AG |
| | CIRCB-10273 | CIRCB-10273 | JQ796167 | None | | | | I13V, K14KR, K20IV, E35D, M36I, R41K, H69K, T74S, L89M | CRF02_AG |
| | CIRCB-10613 | CIRCB-10613 | JQ796174 | None | | | | I13V, K14KR, I15V, K20I, E35D, M36I, N37D, R41K, L63P, I64M, C67Y, H69K, V77I, L89M | CRF02_AG |
| | CIRCB-11058 | CIRCB-11058 | JQ796178 | None | | | | I13V, L19P, K20I, E35D, M36I, R41K, H69K, L89M | CRF02_AG |
| Hamers (2011) | CP076301586 | CP076301586 | HQ993624 | None | | | | K20R, E35D, M36I, R41K, L63T, H69K, L89M, T91V, I93L | CRF02_AG |
| | CP076301669 | CP076301669 | HQ993669 | None | | | | I13V, K14R, G16E, E35D, M36I, R41K, Q61HN, L63V, G68E, H69K, K70R, L89M, T91V, I93L | CRF02_AG |
| | CP076301629 | CP076301629 | HQ993778 | None | | | | I13V, K14R, G16E, K20R, E35D, M36I, R41K, L63T, G68E, H69K, L89IM, T91V, I93L | CRF02_AG |
| | CP076304194 | CP076304194 | HQ993899 | None | | | | T12P, I13V, K14R, G16E, K20R, E35D, M36I, N37D, R41K, L63S, H69K, K70KR, V77I, L89M, I93L | CRF02_AG |
| | CP076303510 | CP076303510 | HQ993993 | None | | | | I13V, I15V, K20I, E35D, M36IV, R41H, D60E, L63P, H69K, K70KR, L89M | CRF02_AG |
| | CP076303528 | CP076303528 | HQ994009 | None | | | | I13V, K14KR, L19P, K20I, E35D, M36I, R41K, H69K, V82I, L89M | CRF02_AG |
| | CP076303531 | CP076303531 | HQ994012 | None | | | | I13V, G16E, K20I, E35D, M36I, R41K, K43KR, H69K, K70KR, L89M | CRF02_AG |
| | CP076303549 | CP076303549 | HQ994028 | None | | | | L10LV, I13A, K14R, K20I, E35D, M36I, R41K, K45R, Q61QEGR, L63X, H69K, L89M | CRF02_AG |
| | CP076303559 | CP076303559 | HQ994035 | None | | | | T12A, I13V, K14R, K20I, E35D, M36I, N37D, R41K, L63LP, H69K, L89M | CRF02_AG |
| | CP076303578 | CP076303578 | HQ994048 | None | | | | I13V, I15V, G16E, K20I, E35D, M36I, P39T, R41K, L63P, H69K, K70R, V77I, L89M | CRF02_AG |
| | CP076303589 | CP076303589 | HQ994053 | None | | | | T12A, I13V, K14R, G16E, K20I, E35D, M36I, N37ND, P39PS, R41K, K43R, L63H, H69K, V77VI, L89I | CRF02_AG |
| | CP076303591 | CP076303591 | HQ994055 | None | | | | L10V, I13V, K14R, I15IV, K20I, E35D, M36I, R41K, H69K, T74S, L89M | CRF02_AG |
| | CP076303603 | CP076303603 | HQ994066 | None | | | | K20I, E35D, M36I, R41K, H69K, K70R, L89M | CRF02_AG |
| | CP076303609 | CP076303609 | HQ994071 | None | | | | I13V, I15L, K20I, E35D, M36I, R41K, I64L, H69K, L89M | CRF02_AG |
| | CP076303611 | CP076303611 | HQ994072 | None | | | | L10V, I13V, K14R, G17E, K20I, E35D, M36I, L63P, H69K, L89M | CRF02_AG |
| | CP076303612 | CP076303612 | HQ994073 | None | | | | I13V, K14GR, G16E, K20I, E35D, M36I, R41K, H69K, I72V, L89M | CRF02_AG |
| | CP076303618 | CP076303618 | HQ994078 | None | | | | L10V, I13V, G17E, K20I, E34Q, E35D, M36I, H69K, K70R, L89M | CRF02_AG |
| | CP076303620 | CP076303620 | HQ994080 | None | | | | E35D, M36I, R41K, R57K, L63H, H69K, I72IM, V77VI, V82I, L89M | CRF02_AG |
| | CP076303622 | CP076303622 | HQ994082 | None | | | | I13V, L19P, K20I, E35D, M36I, R41K, H69K, L89M | CRF02_AG |
| | CP076303633 | CP076303633 | HQ994088 | None | | | L33F | I13AV, K14R, K20I, E35D, M36I, R41K, C67E, H69K, L89M | CRF02_AG |
| | CP076303635 | CP076303635 | HQ994089 | None | | | | I13V, K14R, K20I, E35D, M36I, R41K, H69K, L89M | CRF02_AG |
| | CP076305154 | CP076305154 | HQ994108 | None | | | | I13V, G16E, Q18QR, K20I, E35D, M36I, N37ND, L63LP, I64IL, H69K, K70KR, L89M | CRF02_AG |
| | CP076305155 | CP076305155 | HQ994109 | None | | | | I13A, K14R, K20I, E35D, M36I, R41K, R57K, L63P, H69K, L89M | CRF02_AG |
| | CP076305156 | CP076305156 | HQ994110 | None | | | | I13A, K20I, E35D, M36I, R41RK, L63A, H69K, L89M | CRF02_AG |
| | CP076305159 | CP076305159 | HQ994113 | None | | | | I13V, K14R, G16E, K20I, E35D, M36I, R41K, I64IM, H69K, K70R, L89M | CRF02_AG |
| | CP076305167 | CP076305167 | HQ994120 | None | | | | I13A, K14R, K20I, A22AV, E35D, M36I, R41K, L63PS, H69K, K70KR, L89IM | CRF02_AG |
| | CP076305168 | CP076305168 | HQ994121 | None | | | | L10LV, I13V, K14R, G16GE, K20I, E35D, M36I, R41K, L63LP, H69K, K70R, L89M | CRF02_AG |
| | CP076305172 | CP076305172 | HQ994124 | None | | | | I13V, K14R, K20I, E35D, M36I, R41K, K43KR, I62IV, L63S, I64M, H69K, K70R, V82I, L89M | CRF02_AG |
| | CP076305175 | CP076305175 | HQ994127 | None | | | | I13V, K20I, E35D, M36I, R41K, I64L, H69K, L89M | CRF02_AG |
| | CP076305191 | CP076305191 | HQ994132 | None | | | | L10I, I13V, K14KR, I15IV, L19P, K20I, E35D, M36I, R41K, L63LH, H69K, L89M | CRF02_AG |
| | CP076305205 | CP076305205 | HQ994140 | None | | | | I13IV, K20I, E35D, M36I, R41K, H69K, K70R, V82I, L89M | CRF02_AG |
| | CP076305207 | CP076305207 | HQ994142 | None | | | | I13V, K14R, G17D, K20I, E35D, M36I, H69K, K70KR, L89M | CRF02_AG |
| | CP076305213 | CP076305213 | HQ994147 | None | | | | I13A, G16E, L19P, K20I, A22V, E35D, M36I, R41K, L63H, H69K, K70KR, L89M | CRF02_AG |
| | CP076305223 | CP076305223 | HQ994156 | None | | | | I13V, K14R, I15V, G16E, K20I, E35D, M36I, R41K, H69K, K70R, V77I, L89M | CRF02_AG |
| | CP076300928 | CP076300928 | HQ994544 | None | | | | E35D, M36I, R41K, L63P, H69K, L89M | CRF02_AG |
| | CP763A03685 | CP763A03685 | HQ994696 | None | | | | E35D, M36I, R41K, K45KR, H69K, I72IT, L89M | CRF02_AG |
| Rolland (2011) | 2696 | consensus_2696 | JF320295 | None | | | | I13A, G17E, K20I, E35D, M36I, R41K, H69K, I72V, L89M | CRF02_AG |
| Ajoge (2012) | H19 | HP19 | HM854109 | None | | | | I13V, I15IV, K20I, E35D, M36I, R41K, G68GE, H69K, V75VE, L89M | CRF02_AG |
| | H53 | HP53 | HM854123 | None | | | | I13V, G16E, K20I, E35D, M36I, R41K, H69K, K70R, L89M | CRF02_AG |
| | H60 | HP60 | HM854125 | None | | | | I13V, K14R, G17E, K20I, E35D, M36I, N37S, R41K, I64M, H69K, K70R, L89M | CRF02_AG |
| Caron (2012) | Gab011131 | Gab011131 | HQ541872 | None | | | | I13V, K14R, K20I, E35D, M36I, R41K, H69K, K70R, L89M | CRF02_AG |
| | Gab013027 | Gab013027 | HQ541885 | None | | | | I13V, G16E, K20I, E35D, M36I, R41K, H69K, K70R, V77I, L89M | CRF02_AG |
| | Gab014129 | Gab014129 | HQ541894 | None | | | | I13A, K20I, E35D, M36I, R41K, H69K, L89M | CRF02_AG |
| | Gab031240 | Gab031240 | HQ541909 | None | | | | I13V, K14R, K20I, E35D, M36I, R41K, H69K, L89M | CRF02_AG |
| | Gab031245 | Gab031245 | HQ541910 | None | | | | I13V, G16E, K20I, E35D, M36I, R41K, H69K, L89M | CRF02_AG |
| | Gab041113 | Gab041113 | HQ541915 | None | | | | I13V, K14R, K20I, E35D, M36I, R41K, H69K, K70R, L89M | CRF02_AG |
| | Gab062155 | Gab062155 | HQ541923 | None | | | | I13V, K14R, K20I, E35D, M36I, R41K, I64M, H69K, L89M | CRF02_AG |
| | Gab081156 | Gab081156 | HQ541931 | None | | | | T12P, I13V, K14R, G16E, K20I, E35D, M36I, R41K, R57K, L63S, G68E, H69R, L89M | CRF02_AG |
| | Gab082254 | Gab082254 | HQ541938 | None | | | | I13V, K14R, G16E, K20I, E35D, M36I, R41K, L63H, H69K, V77I, L89I | CRF02_AG |
| | Gab021278 | Gab021278 | HQ541946 | None | | | V11I | L10I, I13V, K14R, G16E, K20I, E35D, M36I, R41K, L63S, C67Y, H69K, K70R, L89M | CRF02_AG |
| | Gab051037 | Gab051037 | HQ541949 | None | | | | I13V, K20I, E35D, M36I, R41K, Q61E, C67Y, H69R, L89M | CRF02_AG |
| | Gab052009 | Gab052009 | HQ541950 | None | | | | L10I, T12K, I13V, G16E, K20I, E35D, M36I, R41K, C67Y, H69K, L89M | CRF02_AG |
| | Gab082007 | Gab082007 | HQ541953 | None | | | | T12P, I13V, K14R, G16E, K20I, E35D, M36I, R41K, L63S, G68E, H69R, L89M | CRF02_AG |
| | Gab011078 | Gab011078 | JN704987 | None | | | | L10I, V11T, I13V, I15V, K20I, E35D, M36I, L63Q, I64M, H69K, K70R, L89M | CRF02_AG |
| | Gab013118 | Gab013118 | JN704992 | None | | | | I13V, K14R, G16E, L19I, K20I, E35D, M36I, R41K, I62V, L63S, I64M, H69K, L89M | CRF02_AG |
| | Gab081270 | Gab081270 | JN704997 | None | | | | I13V, K14R, K20I, E35D, M36I, N37D, H69K, L89M | CRF02_AG |
| Chamberland (2012) | C412S | C412S | HQ267542 | None | | | V11I, L33F | I13V, K14R, K20I, E35D, M36I, R41K, H69K, L89M | CRF02_AG |
| | C413S | C413S | HQ267543 | None | | | | I13V, K14R, G16E, K20I, E35D, M36I, R41K, H69K, K70M, I72R, L89M | CRF02_AG |
| | C417S | C417S | HQ267545 | None | | | | I13V, K14R, G16E, Q18T, K20I, E35D, M36I, R41K, H69K, K70KR, I72T, L89M | CRF02_AG |
| | C423S | C423S | HQ267549 | None | | | | L10IV, I13V, K14R, L19P, K20I, E35D, M36I, R41K, H69K, L89M | CRF02_AG |
| | C425S | C425S | HQ267551 | None | | | V11I | I13V, G16E, K20I, E35D, M36I, R41K, H69K, K70R, L89M | CRF02_AG |
| | C431S | C431S | HQ267556 | None | | | | I13V, K14R, L19P, K20IM, E35D, M36I, R41K, H69K, K70R, L89I | CRF02_AG |
| | C432S | C432S | HQ267557 | None | | | | I13V, K14R, I15V, K20I, E35D, M36I, N37E, R41K, I64M, H69K, K70R, L89M | CRF02_AG |
| | C437S | C437S | HQ267561 | None | | | | I13V, K14R, G16E, K20I, E35D, M36I, R41K, I64L, H69K, K70R, L89M | CRF02_AG |
| | C454S | C454S | HQ267573 | None | | | | I13V, I15L, L19I, K20I, E35D, M36I, R41K, L63A, I64M, H69K, L89M | CRF02_AG |
| | C456S | C456S | HQ267575 | None | | | | I13V, I15V, L19I, K20I, E35D, M36I, R41K, L63P, H69K, K70R, I72M, L89M | CRF02_AG |
| | C461S | C461S | HQ267579 | None | | | | I13V, K14R, G16E, K20I, E35D, M36I, R41K, L63P, I64M, H69K, L89M | CRF02_AG |
| | C470S | C470S | HQ267583 | None | | | | I13V, K20I, E35D, M36I, R41K, L63P, H69K, L89M | CRF02_AG |
| | C473S | C473S | HQ267584 | None | | | | I13V, G16E, K20I, E35D, M36I, R41K, H69K, K70KR, L89M | CRF02_AG |
| | C475S | C475S | HQ267585 | None | | | | I13V, K14R, K20I, E35D, M36I, R41K, L63S, E65D, H69K, V82I, L89M | CRF02_AG |
| | C476S | C476S | HQ267586 | None | | | | T12A, I13V, K14R, I15V, K20I, E35D, M36I, R41K, L63P, I64IM, E65EQ, H69K, K70KR, L89M | CRF02_AG |
| | C481S | C481S | HQ267588 | None | | | | T12A, I13V, K20I, E35D, M36I, N37S, L38I, R41K, L63P, H69K, L89M | CRF02_AG |
| | C482S | C482S | HQ267589 | None | | | | I13V, K14R, I15V, K20I, E35D, M36I, R41K, L63P, G68E, H69K, L89M | CRF02_AG |
| | C483S | C483S | HQ267590 | None | | | | T12R, I13V, L19I, K20I, E35D, M36I, R41K, H69K, L89I | CRF02_AG |
| | C503S | C503S | HQ267595 | None | | | | I13V, K14R, G16E, K20I, E35D, M36I, R41K, I64M, H69K, L89M | CRF02_AG |
| | C507S | C507S | HQ267598 | None | | | | I13V, K14R, I15V, G16E, K20I, E35D, M36I, R41K, H69K, L89M | CRF02_AG |
| | C511S | C511S | HQ267601 | None | | | | I13V, K14R, G16E, K20I, E35D, M36I, R41K, K43R, H69K, L89M | CRF02_AG |
| | C514S | C514S | HQ267604 | None | | | | I13V, K14R, G16E, K20I, E35D, M36I, R41K, L63LP, H69K, L89M | CRF02_AG |
| | D305T | D305T | HQ267609 | None | | | | I13V, G16E, G17E, K20I, E35D, M36I, L63H, H69K, L89M | CRF02_AG |
| | D319T | D319T | HQ267619 | None | | | | I13V, K14R, G16E, K20I, E35D, M36I, R41K, H69K, L89M | CRF02_AG |
| | D326T | D326T | HQ267623 | None | | | | I13V, K14R, K20I, E35D, M36I, R41K, K43R, Q58QP, L63S, I64L, H69K, L89M | CRF02_AG |
| | D327T | D327T | HQ267624 | None | | | | I13V, G17E, K20I, E35D, M36I, N37ND, R41K, H69K, K70R, T74S, L89M | CRF02_AG |
| | D329T | D329T | HQ267625 | None | | | | T12A, I13A, K14R, K20I, A22V, E35D, M36I, R41K, L63P, H69K, K70R, L89I, T91I | CRF02_AG |
| | D332T | D332T | HQ267628 | None | | | | I13V, K14R, G17E, K20I, E35D, M36I, R41K, H69K, K70R, L89M | CRF02_AG |
| | D334T | D334T | HQ267629 | None | | | V11I | T12TA, I13V, K14R, K20I, E35D, M36I, R41K, H69K, V82I, L89M | CRF02_AG |
| | D339T | D339T | HQ267633 | None | | | | I13V, K14R, I15V, G17E, K20I, E35D, M36I, R41K, H69K, K70R, L89M | CRF02_AG |
| | D344T | D344T | HQ267639 | None | | | | I13V, K14R, L19P, K20I, E35D, M36I, N37D, R41K, H69K, L89M | CRF02_AG |
| | D346T | D346T | HQ267641 | None | | | | I13V, K14R, K20I, E35D, M36I, R41K, L63P, I64L, H69K, L89M | CRF02_AG |
| | D347T | D347T | HQ267642 | None | | | | I13V, K14R, G16E, K20I, E35D, M36I, R41K, H69K, K70KR, L89M | CRF02_AG |
| | D350T | D350T | HQ267643 | None | | | | I13V, G16E, K20I, E35D, M36I, R41K, H69K, K70R, I72M, L89M | CRF02_AG |
| | D355T | D355T | HQ267647 | None | | | | I13V, K14R, K20I, E35D, M36I, R41K, L63P, H69K, L89M | CRF02_AG |
| | D356T | D356T | HQ267648 | None | | | | I13V, I15V, K20I, E35D, M36I, P39T, R41K, L63P, H69K, L89M | CRF02_AG |
| | D360T | D360T | HQ267649 | None | | | | I13A, K20I, E35D, M36I, R41K, R57RK, L63P, H69K, K70R, L89M | CRF02_AG |
| | D361T | D361T | HQ267650 | None | | | | I13V, K14R, G16E, K20I, E35D, M36I, R41K, H69K, I72V, L89M | CRF02_AG |
| | D365T | D365T | HQ267653 | None | | | | I13V, L19P, K20I, E35D, M36I, R41K, I64M, H69K, K70KR, L89M | CRF02_AG |
| | D367T | D367T | HQ267654 | None | | | | I13V, K14R, G16E, L19I, K20I, E35D, M36I, R41K, H69K, V77I, L89M | CRF02_AG |
| | D374T | D374T | HQ267660 | None | | | | I13V, K20I, E35D, M36I, R41K, H69K, L89M | CRF02_AG |
| De Gascun (2012) | IRL10794 | IRL10794 | JN622246 | None | | | | I13V, K14R, K20I, E35D, M36I, R41K, G52GS, G68GR, H69K, K70R, L89M | CRF02_AG |
| | IRL46503 | IRL46503 | JN622257 | None | | | | I13V, G16E, L19LI, K20I, E35D, M36I, R41K, K43R, H69K, L89M | CRF02_AG |
| | IRL56766 | IRL56766 | JN622275 | None | | | | I13V, G16E, K20I, E35D, M36I, R41K, K43R, R57K, I64V, H69K, K70R, L89M | CRF02_AG |
| | IRL58932 | IRL58932 | JN622276 | None | | | | I13V, K14R, G16E, K20I, E35D, M36I, R41K, I64L, H69K, L89M | CRF02_AG |
| | IRL20063 | IRL20063 | JN622352 | None | | | | L10I, I13V, K14R, G16E, K20I, E35D, M36I, R41K, H69K, L89M | CRF02_AG |
| | IRL29175 | IRL29175 | JN622354 | None | | | | T12E, I13V, K14R, K20I, E35D, M36I, R41K, H69K, L89M | CRF02_AG |
| El Annaz (2012) | 7230 | 7230.PR | JN185259 | None | | | | T12S, I13V, K14R, K20I, E35D, M36I, N37K, R41K, H69K, L89M | CRF02_AG |
| Hassan (2012) | RS09000931 | RS09000931 | HQ441673 | None | | | | I13V, G16E, K20R, E35D, M36I, R41K, L63T, G68E, H69K, K70R, V82I, L89M, T91V, I93L | CRF02_AG |
| Hingankar (2012) | IN-NARI-4-031 | IN-NARI-4-031 | JN314920 | None | | | | T12S, K14R, E35D, M36I, N37D, R41K, R57K, L63T, H69K, V82I, L89M | CRF02_AG |
| Karlsson (2012) | SE_135 | SE_135 | JQ698761 | None | | | | T4N, I13V, K14R, L19P, K20I, E35D, M36I, R41K, H69K, L89M | CRF02_AG |
| | SE_174 | SE_174 | JQ698786 | None | | | | L10I, I13V, G16E, K20I, E35D, M36I, R41K, D60E, Q61E, I62V, H69K, T74A, L89M | CRF02_AG |
| | SE_191 | SE_191 | JQ698798 | None | | | | I13V, K14R, G16E, Q18H, K20I, E35D, M36I, R41K, H69K, K70R, L89M | CRF02_AG |
| | SE_215 | SE_215 | JQ698819 | None | | | | I13V, K14R, K20I, E35D, M36I, N37E, L63P, I64L, C67Y, H69K, L89M | CRF02_AG |
| | SE_275 | SE_275 | JQ698859 | None | | | | I13V, I15V, K20I, E35D, M36I, N37E, P39PS, L63I, I64M, C67CS, H69K, L89M | CRF02_AG |
| Machado (2012) | CUPL0906 | CUPL0906 | HQ655339 | None | | | | I13V, K14R, G16E, K20I, E35D, M36I, R41K, I64M, H69K, K70R, L89M | CRF02_AG |
| | CUPL0913 | CUPL0913 | HQ655346 | None | | | | I13V, K14R, G16E, K20I, E35D, M36I, R41K, I64M, H69K, K70R, R87S, L89M | CRF02_AG |
| | CUPL0914 | CUPL0914 | HQ655347 | None | | | | I13V, K14R, G16E, K20I, E35D, M36I, R41K, I64M, H69K, K70R, L89M | CRF02_AG |
| | CUPL0924 | CUPL0924 | HQ655357 | None | | | | I13V, K14R, G16E, L19I, K20I, E35D, M36I, H69K, L89M | CRF02_AG |
| | CUPL0937 | CUPL0937 | HQ655370 | None | | | | I13V, K14R, G16E, K20I, E35D, M36I, R41K, H69K, K70R, L89M | CRF02_AG |
| | CUPL0943 | CUPL0943 | HQ655376 | None | | | | I13V, K14R, G16E, K20L, E35D, M36I, N37K, R41K, K43R, H69K, L89M | CRF02_AG |
| | CUPL1021 | CUPL1021 | HQ655398 | None | | | | I13V, G16E, K20I, E35D, M36I, R41K, L63P, H69K, K70R, L89M, T91A | CRF02_AG |
| | CUPL1023 | CUPL1023 | HQ655400 | None | | | | I13V, K14R, G16E, K20I, E35D, M36I, R41K, L63S, H69K, K70R, L89M, T91A, Q92P | CRF02_AG |
| | CUPL1025 | CUPL1025 | HQ655402 | None | | | | I13V, K20I, E35D, M36I, R41K, I64M, H69K, K70R, L89M | CRF02_AG |
| | CUPL1055 | CUPL1055 | JN000027 | None | | | | I13L, K20I, E35D, M36I, R41K, H69K, K70R, L89M | CRF02_AG |
| | CUPL1063 | CUPL1063 | JN000035 | None | | | | T12A, I13V, K14R, G16E, K20I, E35D, M36I, L63P, H69K, L89M | CRF02_AG |
| | CUPL1071 | CUPL1071 | JN000043 | None | | | | Q18H, K20I, E35D, M36I, R41K, I64M, H69K, K70R, L89M | CRF02_AG |
| | CUPL1072 | CUPL1072 | JN000044 | None | | | | T12E, I13V, K14R, K20I, E35D, M36I, R41K, R57K, C67Y, H69K, V82I, L89M | CRF02_AG |
| | CUPL1086 | CUPL1086 | JN000058 | None | | | | I13V, K14R, G16E, K20I, E35D, M36I, R41K, I64M, H69K, K70R, L89M | CRF02_AG |
| | CUPL1088 | CUPL1088 | JN000060 | None | | | | L10V, T12N, I13V, I15V, G16E, L19I, K20I, E35D, M36I, R41K, H69K, K70R, V77I, L89M | CRF02_AG |
| | CUPL1092 | CUPL1092 | JN000064 | None | | | | I13V, K14R, G16E, K20I, E35D, M36I, L63H, H69K, L89M, T91A | CRF02_AG |
| | CUPL1095 | CUPL1095 | JN000067 | None | | | | I13V, K14R, G16E, K20I, E35D, M36I, R41K, H69K, L89M | CRF02_AG |
| | CUPL1097 | CUPL1097 | JN000069 | None | | | | I13V, K20I, E35D, M36I, R41K, H69K, K70R, L89M | CRF02_AG |
| | CUPL1129 | CUPL1129 | JX194208 | None | | | | I13V, K14R, G16E, K20I, E35D, M36I, R41K, I64M, H69K, K70R, L89M | CRF02_AG |
| | CUPL1131 | CUPL1131 | JX194210 | None | | | | I13V, G16E, L19I, K20I, E35D, M36I, R41K, H69K, K70R, V77I, L89M | CRF02_AG |
| | CUPL1151 | CUPL1151 | JX194230 | None | | | | I13V, K14R, G16E, K20I, E35D, M36I, R41K, H69K, K70R, L89M, T91A | CRF02_AG |
| | CUPL1152 | CUPL1152 | JX194231 | None | | | | I13V, K14R, G16E, K20I, E35D, M36I, R41K, H69K, K70R, L89M | CRF02_AG |
| Youngpairoj (2012) | cm1154 | cm1154 | DQ166392 | None | | | | I13V, K14R, G16E, K20I, E35D, M36I, R41K, H69K, K70R, V77I, L89M | CRF02_AG |
| | cm1177 | cm1177 | DQ166393 | None | | | | I13V, K14R, I15V, G16E, K20I, E35D, M36I, R41K, I64M, H69K, K70E, L89M | CRF02_AG |
| | cm11bb | cm11bb | DQ166417 | None | | | | I13V, K14R, G16E, K20I, E35D, M36I, R41K, K43R, L63P, H69K, K70R, L89M | CRF02_AG |
| | cm1490 | cm1490 | DQ166394 | None | | | | I13V, K14R, K20I, E35D, M36I, R41K, K43R, I64V, H69K, L89M | CRF02_AG |
| | cm1500 | cm1500 | DQ166395 | None | | | | I13V, K14R, G17E, K20I, E35D, M36I, R41K, H69K, K70R, L89M | CRF02_AG |
| | cm1601 | cm1601 | DQ166399 | None | | | | I13V, K14R, K20I, E35D, M36I, R41K, H69K, L89M | CRF02_AG |
| | cm1642 | cm1642 | DQ166403 | None | | | L33F | I13V, K20I, E35D, M36I, R41K, C67Y, H69K, L89M | CRF02_AG |
| | cm925 | cm925 | DQ166386 | None | | | | I13V, K14R, L19P, K20I, E35D, M36I, R41K, H69K, V82I, L89M | CRF02_AG |
| Ferreira (2013) | BR09SP371 | BR09SP371 | HM534195 | None | | | | Q2K, I13V, G16E, Q18K, K20I, E35D, M36I, P39S, R41K, H69K, K70R, R87RL, L89M | CRF02_AG |
| Frentz (2013) | EHR-00105 | EHR-00105 | JX299533 | None | | | | I13V, L19P, K20I, E35D, M36I, R41K, K45R, L63P, H69K, L89M | CRF02_AG |
| | EHR-06159 | EHR-06159 | JX299641 | None | | | | I13V, K14R, K20I, E35D, M36I, R41K, K45R, I64L, H69K, A71V, V82I, L89M, I93L | CRF02_AG |
| | EHR-08547 | EHR-08547 | JX299676 | None | | | | I13V, K14R, G16E, K20I, E35D, M36I, R41K, H69K, I85M, L89M | CRF02_AG |
| | EHR-10045 | EHR-10045 | JX299696 | None | | | | L10V, I13V, L19P, K20I, E35D, M36I, R41K, K45R, H69K, K70R, L89M | CRF02_AG |
| | EHR-207908 | EHR-207908 | JX299884 | None | | | | I13V, I15V, K20I, E35D, M36I, N37D, R41K, I64M, H69K, T74A, L89M, I93L | CRF02_AG |
| | EHR-22580 | EHR-22580 | JX299930 | None | | | | I13V, K14R, K20I, E35D, M36I, N37S, R41K, H69K, K70R, V82I, L89M | CRF02_AG |
| | EHR-23297 | EHR-23297 | JX299939 | None | | | | I13V, K14R, K20I, E35D, M36I, R41K, L63S, I64L, H69N, V82I, L89M, I93L | CRF02_AG |
| | EHR-26398 | EHR-26398 | JX299999 | None | | | | Q7H, I13V, K14R, I15V, K20I, E35D, M36I, R41K, L63LP, G68E, H69R, L89M | CRF02_AG |
| | EHR-30027 | EHR-30027 | JX300055 | None | | | | I13V, K14R, G17E, K20I, E35D, M36I, R41RK, L63H, H69K, L89M | CRF02_AG |
| | EHR-40530 | EHR-40530 | JX300224 | None | | | | T12A, I13V, K14R, G16E, K20I, E35D, M36I, R41K, L63H, H69K, K70E, V82I, L89I, T91A, I93V, L97I | CRF02_AG |
| | EHR-42510 | EHR-42510 | JX300256 | None | | | | I13V, K14R, K20R, E35D, M36I, N37D, R41K, H69K, L89M | CRF02_AG |
| | EHR-44176 | EHR-44176 | JX300285 | None | | | | I13V, K14KR, K20I, E35D, M36I, N37S, R41K, H69K, K70R, V77I, L89M | CRF02_AG |
| | EHR-47566 | EHR-47566 | JX300335 | None | | | | I13V, K14R, K20I, E35D, M36I, R41K, H69K, L89M | CRF02_AG |
| | EHR-56048 | EHR-56048 | JX300470 | None | | | | L10LI, I13V, K14R, G17E, K20I, E35D, M36I, R41RK, L63LPR, H69K, L89M | CRF02_AG |
| | EHR-563306 | EHR-563306 | JX300477 | None | | | | T12TA, I13V, K14R, I15IV, K20I, E35D, M36I, R41K, H69K, L89M | CRF02_AG |
| | EHR-64343 | EHR-64343 | JX300614 | None | | | | I13V, K14R, G16E, K20I, E35D, M36I, R41K, H69K, L89M | CRF02_AG |
| | EHR-65498 | EHR-65498 | JX300643 | None | | | | I13A, K20I, E35D, M36I, R41K, L63A, H69K, L89M | CRF02_AG |
| | EHR-65581 | EHR-65581 | JX300646 | None | | | | I13V, K14R, G17E, K20I, E35D, M36I, Q61H, L63P, H69Q, K70Q, A71V, I72IT, V75VIM, I93L | CRF02_AG |
| | EHR-68395 | EHR-68395 | JX300691 | None | | | | I13V, K14R, K20I, E35D, M36I, R41K, I64L, H69K, A71V, V82I, L89M, N98C | CRF02_AG |
| | EHR-69961 | EHR-69961 | JX300717 | None | | | | T12A, I13V, G16E, K20I, E35D, M36I, L63S, I64M, H69K, K70R, L89M | CRF02_AG |
| | EHR-73035 | EHR-73035 | JX300781 | None | | | | I13V, K14R, G16E, K20I, E35D, M36I, R41K, I64IM, H69K, L89M | CRF02_AG |
| | EHR-75101 | EHR-75101 | JX300817 | None | | | | L10LV, T12TS, I13V, K14KR, K20I, E35D, M36I, L38I, R41K, H69K, L89M | CRF02_AG |
| | EHR-81995 | EHR-81995 | JX300937 | None | | | | I13V, K14R, K20I, E35D, M36I, R41K, I64L, H69K, V82I, L89M | CRF02_AG |
| | EHR-83526 | EHR-83526 | JX300958 | None | | | | I13AV, G16E, K20I, E35D, M36I, R41K, R57RK, I64IM, H69K, K70KR, L89M | CRF02_AG |
| | EHR-95215 | EHR-95215 | JX301112 | None | | | | I13V, K14R, G17E, K20I, E35D, M36I, R41K, L63H, H69K, L89M | CRF02_AG |
| Hawke (2013) | 13876993 | 13876993 | KC237930 | None | | | | L5LF, I13A, K14R, I15V, K20I, E35D, M36I, R41K, H69K, L89M | CRF02_AG |
| | 16010109 | 16010109 | KC237966 | None | | | | L10I, I13V, G16E, L19P, K20I, E35D, M36I, R41K, K43R, L63S, H69K, K70R, L89M | CRF02_AG |
| | 2807998 H | 2807998 H | KC238103 | None | | | | I13V, K14R, L19P, K20I, E35D, M36I, R41K, H69K, L89M | CRF02_AG |
| | 90119902 | 90119902 | KC238223 | None | | | | I13V, K14R, G16E, K20I, E35D, M36I, N37D, R41K, K43KR, H69K, L89M | CRF02_AG |
| | 92006411 | 92006411 | KC238273 | None | | | | I13V, K14R, G16E, K20I, E35D, M36I, N37D, R41K, H69K, K70KR, L89M | CRF02_AG |
| | 99556553 | 99556553 | KC238299 | None | | | | I13V, K14KR, G16E, L19V, K20I, E35D, M36I, R41K, L63S, H69K, K70R, V77VI, L89I | CRF02_AG |