<!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

Protease Inhibitors

Subtype CRF02_AG
Gene PR
Mutation V11I
Rx PI-naive
IncludeMixtures No
References 49
Patients 112
Isolates 114
 
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Sequences matching input query are shown below. Original reference, patient identifier, isolate name, partial treatment histories and accession number are indicated. Complete treatment histories, when available, can be accessed by clicking the isolate name. Sequences may additionally be downloaded in the fasta format, or viewed as individual or composite alignments using the options above. If the user wishes to view individual alignments of isolates for which there are multiple clones, the user can choose to view either an alignment of consensus sequences derived from the clones or an alignment of each clone as well as a consensus sequence.

Author (yr) Patient Isolate Acc# PIs WksPIMajorDRMs PIMinorDRMs OtherMutSubtype
Vergne (2000)LV57HALDLV57HALDAJ286998None  V11IL10V, I13V, K14R, G16E, K20I, E35D, M36I, R41K, H69K, K70R, L89MCRF02_AG
Yahi (2001)NY_M18M18AY010380None  V11IT12K, I13A, K14R, K20I, M36I, R41K, L63Q, H69K, L89MCRF02_AG
Fonjungo (2002)CM142CM142AY051240None  V11II13V, K14R, K20I, M36I, R41K, I64M, H69K, L89M, I93LCRF02_AG
 CM140CM140AY051238None  V11II13V, K14R, K20I, E35D, M36I, N37E, R41K, H69K, L89M, I93LCRF02_AG
Gibb (2002)DMG1313_w0 None  V11IL10LI, I13V, I15V, K20V, M36I, N37S, R41K, H69K, L89MCRF02_AG
Vergne (2002)LVLBV30_10LVLBV30_10AJ313402None  V11II13A, K20I, M36I, R41K, I62V, L63P, H69K, L89MCRF02_AG
Eshleman (2004)ABB01ABB01AY444230None  V11IT12X, I13V, K14R, G16E, K20I, L33V, E35G, M36I, R41K, K43Q, H69K, K70R, I72V, L89MCRF02_AG
 ABB05ABB05AY444232None  V11IL10LV, I13V, K14R, K20I, E34A, M36I, R41K, H69K, L89MCRF02_AG
Konings (2004)KF_Pat8301CM5630AY359765None  V11II13A, K14R, K20I, M36I, R41K, K43R, H69K, L89ICRF02_AG
Carr (2005)3217MN3217MNAY847404None  V11IL10V, I13A, G16E, K20I, E35D, M36I, R41K, H69K, K70R, L89MCRF02_AG
Tovanabutra (2005)99US_MSC113499US_1134AY444809None  V11II13V, K20I, M36I, R41K, L63LP, C67CY, H69K, I72M, L89ICRF02_AG
Koizumi (2006)YK_04CM042YK_04CM042DQ461845None  V11IL10V, I13V, K14R, L19P, K20I, M36I, N37A, R41K, H69K, L89MCRF02_AG
Ndongmo (2006)CM31CBN_CM31DQ394114None  V11II13V, K14R, K20I, M36I, R41K, L63P, H69K, K70R, I72M, L89I, I93LCRF02_AG
 CM324CBN_CM324DQ394161None  V11II13V, K20I, E34A, N37S, R41K, H69K, L89M, I93LCRF02_AG
Niama (2006)CHU18CHU18FM164908None  V11II13V, K14R, L19V, K20I, M36I, L63P, H69K, L89ICRF02_AG
 AS23AS23FM164896None  V11IT12K, I13V, K14R, K20I, M36I, R41K, H69K, K70R, L89MCRF02_AG
 CHU33CHU33FM164914None  V11IT12Q, I13V, K14R, K20I, E35D, M36I, R41K, H69K, V82I, L89MCRF02_AG
Razafindratsimandresy (2006)RR_MAD-GP099MAD-GP099DQ345015None  V11IL10V, I13V, L19P, K20I, M36I, N37D, R41K, Q61N, L63H, H69K, V75VI, L89MCRF02_AG
Derache (2007)12821282EF064519None  V11IT12P, I13V, K14R, I15V, G17E, K20I, T26P, M36I, N37D, R41K, H69K, L89MCRF02_AG
Delgado (2008)GH_011GH_011EU177888None  V11I, L89VI13A, K20I, M36I, N37D, R41K, L63P, H69KCRF02_AG
 GH_063GH_063EU177931None  V11IT12TK, I13V, K14KR, G16E, L19Q, K20I, M36I, R41K, H69K, K70R, L89MCRF02_AG
 GH_137GH_137EU177983None  V11II13V, L19Q, K20I, M36I, N37S, R41K, I64V, H69K, K70R, L89ICRF02_AG
 GH_138GH_138EU177984None  V11II13V, L19Q, K20I, M36I, R41K, H69K, T74M, V82I, L89MCRF02_AG
 GH_152GH_152EU177996None  V11IL10V, I13AV, G16GE, L19Q, K20I, M36I, N37ND, R41K, K43KR, L63LP, H69K, K70KR, L89MCRF02_AG
 GH_194GH_194EU178027None  V11II13V, K14R, L19V, K20I, E35ED, M36I, R41K, L63P, H69K, K70R, L89ICRF02_AG
 GH_231GH_231EU178060None  V11II13V, K20I, M36I, R41K, L63M, H69K, V82I, L89MCRF02_AG
Derache (2008)BKO-903BKO-903EU330659None  V11II13V, K14R, L19P, K20I, M36I, R41K, L63Y, H69K, L89ICRF02_AG
 BKO-940BKO-940EU330675None  V11II13V, K14R, K20I, M36I, R41K, L63P, H69K, L89MCRF02_AG
 SGO-05SGO-05EU330750None  V11IL10I, I13V, L19P, K20I, M36I, N37D, R41K, L63S, C67Y, H69K, K70R, L89MCRF02_AG
 SGO-28SGO-28EU330772None  V11II13V, K20I, E35N, M36I, R41K, I64M, H69K, K70R, L89MCRF02_AG
 SGO-29SGO-29EU330773None  V11II13V, K14R, K20I, M36I, R41K, L63S, H69K, V82I, L89MCRF02_AG
 SGO-30SGO-30EU330774None  V11IT12P, I13V, K14R, K20I, M36I, N37D, R41K, L63P, G68E, H69K, V82I, L89MCRF02_AG
 SGO-93SGO-93EU330833None  V11I, N83DI13V, K14R, K20I, E35D, M36I, R41K, H69K, L89M, C95SCRF02_AG
Holguin (2008)SP3-160640SP3-160640EU342771None  V11II13V, K14R, K20I, M36I, R41K, H69K, L89MCRF02_AG
McConnell (2008)NV25NV25EU288110None  V11IR8G, T12K, I13V, K14R, K20I, M36I, R41K, L63LP, H69K, L89MCRF02_AG
Palacios (2008)4117541175 None  V11IT12K, I13V, K20I, E35G, M36I, N37D, R41K, H69K, L89MCRF02_AG
 4118841188 None  V11IW6G, T12K, I13V, K20I, E35AG, M36I, N37DE, R41K, H69K, L89MCRF02_AG
Sylla (2008)A2608A2608_C1DQ991631None  V11IL10I, I13V, I15V, L19P, K20I, M36I, R41K, L63S, H69K, K70R, L89MCRF02_AG
  A2608_C2DQ991632None  V11IL10I, I13V, I15V, L19P, K20I, M36I, R41K, L63S, H69K, K70R, L89MCRF02_AG
Aghokeng (2009)CYM003CYM003GU191556None  V11II13V, K14R, G16E, K20I, E35D, M36I, N37NS, P39PS, R41K, H69K, L89MCRF02_AG
 CYM085CYM085GU191571None  V11II13V, K20I, E35ED, M36I, R41K, H69K, L89MCRF02_AG
Ayouba (2009)TE10050TE10050PRGQ351704None  V11II13V, K20I, M36I, R41K, H69K, L89MCRF02_AG
 RES632RES632PRGQ351723None  V11I, L33FL10V, I13V, G16E, K20I, M36I, R41K, E65EK, H69K, K70R, I72V, L89M, I93VCRF02_AG
 RES024RES024-1PRGQ351734None  V11IT12S, I13V, K14R, K20I, M36I, R41K, I64M, H69K, L89MCRF02_AG
 RES226RES226-8PRGQ351744None  V11II13V, K14R, K20I, M36I, R41K, L63P, H69K, L89MCRF02_AG
 RES243RES243-8PRGQ351747None  V11IT12K, I13V, G16E, L19I, K20I, M36I, N37S, R41K, H69K, L89MCRF02_AG
 0.6530.653-UPRGQ351841None  V11IL10V, I13V, G16E, K20I, M36I, R41K, C67G, H69K, K70R, L89MCRF02_AG
 28852885HALDPRGQ351983None  V11IL10LV, T12TA, I13V, K20I, M36I, N37S, R41K, H69K, L89ICRF02_AG
Bartolo (2009)CSE11801AOCSE118EU068201None  V11IL10I, I13V, I15V, G16E, K20I, E35D, M36I, N37K, R41K, L63T, H69Q, L89M, I93LCRF02_AG
 HDC25293AOHDC252EU068317None  V11II13V, K14R, K20I, M36I, R41K, H69K, L89MCRF02_AG
Cuevas (2009)P0853P0853.1EU822520None  V11II13V, K20I, M36I, R41K, H69K, L89MCRF02_AG
 P1261P1261.1EU822614None  V11II13V, K14R, G16E, K20I, E35D, M36I, R41K, H69K, K70KR, L89MCRF02_AG
 P0957P0957.1EU822783None  V11II13V, K14R, G16E, K20I, E35D, M36I, R41K, H69K, L89MCRF02_AG
Hawkins (2009)R120ZZR120FJ931316None  V11IT12A, I13V, K14R, K20I, M36I, R41K, L63P, H69K, L89ICRF02_AG
 R224ZZR224FJ931383None  V11IL10V, I13V, K14R, G16E, K20I, E35D, M36I, R41K, H69K, K70R, L89MCRF02_AG
Tebit (2009)TR154TR154FJ577307None  V11IL10I, I13V, K14R, G16E, L19P, K20I, M36I, R41K, L63S, C67Y, H69K, K70R, L89MCRF02_AG
 TR216TR216FJ577339None  V11II13A, K20I, M36I, R41K, L63P, H69K, K70R, L89ICRF02_AG
 TR261TR261FJ577362None  V11IL10V, I13V, L19P, K20I, M36I, R41K, H69K, L89MCRF02_AG
Vercauteren (2009)pt17732700061467GQ399251None  V11II13V, K14R, K20I, M36I, R41K, L63S, I64M, H69K, L89MCRF02_AG
 pt14804401747108GQ399544None  V11IT12A, I13V, K20I, M36I, R41K, H69K, I72M, L89ICRF02_AG
Yaotse (2009)HT11206TG.HT112FM955719None  V11IT12K, I13A, K14R, I15V, K20I, M36I, R41K, H69K, L89MCRF02_AG
 HT12406TG.HT124FM955725None  V11II13V, L19P, K20I, M36I, N37D, R41K, Q61H, H69K, L89MCRF02_AG
 HT17006TG.HT170FM955746None  V11IL10V, I13V, G16E, L19P, K20I, E35G, M36I, R41K, L63S, H69K, I72IV, V77I, L89MCRF02_AG
Carr (2010)3217MN02CM.3217MNGU201514None  V11IL10V, I13A, G16E, K20I, E35D, M36I, R41K, H69K, K70R, L89MCRF02_AG
Diop-Ndiaye (2010)57HALD57HALDFN599724None  V11IL10V, I13V, K14R, G16E, K20I, E35D, M36I, R41K, H69K, K70R, L89MCRF02_AG
Hattori (2010)C06-51110355C06-51110355AB864762None  V11IT12A, I13V, K14R, I15V, K20I, M36I, R41K, L63P, H69K, L89MCRF02_AG
 D06-2031012D06-2031012AB865889None  V11II13A, G16GE, K20I, E35A, M36I, N37NS, R41K, R57K, L63X, H69K, K70KR, L89ICRF02_AG
 D08-2031032D08-2031032AB865910None  V11IL10I, I13A, K14N, K20I, E34A, E35D, M36I, N37S, R41I, R57K, L63AT, H69K, L89MCRF02_AG
Soares (2010)CM04_088CM04_088GU366125None  V11IL10I, I13V, K14R, L19P, K20I, M36I, N37D, R41K, L63P, H69K, K70R, L89MCRF02_AG
Yang (2010)20106934742010693474JQ616900None  V11IL10I, T12Q, I13V, K14KR, I15V, L19P, K20I, E35D, M36I, R41K, L63T, H69K, L89MCRF02_AG
Aghokeng (2011)SK8033-PISK8033-PIHQ864346None  V11I, L33FT12K, I13V, K14KR, K20I, E35D, M36I, R41K, H69K, K70R, L89MCRF02_AG
 SK4009-PISK4009-PIHQ864384None  V11II13V, K20I, M36I, R41K, H69K, K70KR, V82I, L89MCRF02_AG
Dagnra (2011)08TG.T301708TG.T3017FR715254None  V11IT12A, I13A, K14R, I15IV, G16GE, K20I, M36I, R41K, I62V, L63H, H69K, L89ICRF02_AG
 08TG.T303908TG.T3039FR715257None  V11IT12A, I13V, K14R, I15V, K20I, M36I, R41K, L63P, H69K, A71AT, L89ICRF02_AG
Caron (2012)Gab021278Gab021278HQ541946None  V11IL10I, I13V, K14R, G16E, K20I, E35D, M36I, R41K, L63S, C67Y, H69K, K70R, L89MCRF02_AG
Chamberland (2012)C412SC412SHQ267542None  V11I, L33FI13V, K14R, K20I, E35D, M36I, R41K, H69K, L89MCRF02_AG
 C425SC425SHQ267551None  V11II13V, G16E, K20I, E35D, M36I, R41K, H69K, K70R, L89MCRF02_AG
 D334TD334THQ267629None  V11IT12TA, I13V, K14R, K20I, E35D, M36I, R41K, H69K, V82I, L89MCRF02_AG
De Gascun (2012)IRL14981IRL14981JN622252None  V11II13V, K14R, K20I, M36L, N37S, R41K, L63P, H69K, L89ICRF02_AG
 IRL58518IRL58518JN622363None  V11IT12KN, I13V, K14R, K20I, M36I, N37ND, R41K, L63T, I64IM, H69KR, I72IT, L89MCRF02_AG
Mollan (2012)MK26MK26w62 None  V11IL10I, I13V, K14R, K20I, M36I, R41K, H69K, L89MCRF02_AG
Somda (2012)46-277-2346-277-23HG529935None  V11II13V, K20I, M36I, R41K, L63P, H69K, K70KR, L89IMCRF02_AG
 47-1931-2147-1931-21HG529973None  V11II13V, K20I, M36I, R41K, H69K, L89MCRF02_AG
Youngpairoj (2012)cm1660cm1660DQ166406None  V11II13V, K14R, K20I, M36I, R41K, H69K, L89MCRF02_AG
Aghokeng (2013)HJ3168HJ3168JX982991None  V11II13V, K14R, K20I, M36I, R41K, K45KR, L63LP, H69K, V82I, L89IMCRF02_AG
 HJ3195HJ3195JX983002None  V11IT12A, I13V, K14R, K20I, M36I, R41K, H69K, L89ICRF02_AG
Billong (2013)MR032MR032KF192131None  V11IT12K, I13V, K14R, I15V, K20I, M36I, N37D, R41K, H69K, K70R, V82I, L89MCRF02_AG
Frentz (2013)EHR-00407EHR-00407JX299542None  V11IL10V, I13V, K14R, L19P, K20I, M36I, R41K, H69K, L89MCRF02_AG
 EHR-19066EHR-19066JX299854None  V11II13V, K14R, K20I, M36L, N37S, R41K, L63P, H69K, L89ICRF02_AG
 EHR-41925EHR-41925JX300249None  V11IT12E, I13V, K14RS, L19LP, K20I, M36I, R41K, L63H, H69K, L89ICRF02_AG
Kebe (2013)SNA3-248SNA3-248JN193491None  V11II13V, K14R, G17E, K20I, M36I, N37D, L63H, H69K, K70KR, L89ICRF02_AG
 SN432HALDSN432HALDHM002505None  V11IT12K, I13AV, K14KR, I15IV, G16E, K20I, M36I, R41K, K43R, I62V, L63H, I64L, H69K, L89ICRF02_AG
Nii-Trebi (2013)13591359AB751425None  V11IT12Q, I13V, L19ST, K20I, M36I, N37D, R41K, K43KR, I64IV, H69R, L89ICRF02_AG
 132838132838AB751416None  V11IL10M, T12TK, I13A, K14KR, K20I, M36I, P39S, R41K, K43R, I62IV, L63AS, H69K, L89MCRF02_AG
 3630736307AB751446None  V11IL10V, I13V, K14R, G16E, K20I, E35D, M36I, R41K, H69K, L89MCRF02_AG
 122081122081AB751405None  V11IL10LV, I13V, K20I, E35D, M36I, R41K, L63P, I64L, H69K, L89MCRF02_AG
 8558785587AB751457None  V11II13V, K14R, G17GD, K20I, M36I, N37D, R41RK, H69K, K70KR, L89MCRF02_AG
 KF131KF131AB751484None  V11II13V, K14KR, K20I, M36I, R41K, H69K, V82I, L89MCRF02_AG
 KF327KF327AB751494None  V11IT12TI, I13V, K20I, M36I, N37S, R41K, L63S, H69K, L89ICRF02_AG
 KF7KF7AB751480None  V11IL10V, I13V, K20I, M36I, R41K, H69K, K70R, L89ICRF02_AG
 KF372KF372AB751498None  V11II13V, L19P, K20I, M36I, R41K, L63H, H69K, L89ICRF02_AG
 KF118KF118AB751465None  V11II13A, K20I, M36I, R41K, L63P, H69K, L89MCRF02_AG
 KF58KF58AB751475None  V11II13A, K14R, L19IV, K20I, E35D, M36I, R41K, L63P, H69K, L89ICRF02_AG
 KF44KF44AB751470None  V11IL10V, I13V, K20I, E35D, M36I, R41K, L63P, I64L, H69K, L89MCRF02_AG
Pircher (2013)B1111B1111JX110298None  V11IL10M, T12K, I13V, K14R, G16E, L19P, K20I, E35D, M36I, P39T, R41K, L63T, H69K, V77I, L89MCRF02_AG
 B1104B1104JX110291None  V11IL10M, I13V, I15V, G17E, K20I, E35D, M36I, N37NI, R41K, K45KR, R57RK, L63P, E65Q, H69K, L89MCRF02_AG
Thiam (2013)750HALD750HALDJX187627None  V11IL10V, I13V, K14R, G17E, K20I, M36I, R41K, H69K, K70R, L89MCRF02_AG
 2666-HALD2666-HALDJN673686None  V11IT12K, I13V, L19I, K20I, E35N, M36I, R41K, H69K, L89MCRF02_AG
 418-HALD418-HALDJN673621None  V11IT12TA, I13V, K20I, M36I, R41K, L63P, H69K, L89MCRF02_AG
 2594-HALD2594-HALDJN673691None  V11IT12TA, I13V, K14R, K20I, M36I, R41K, I64V, H69K, L89ICRF02_AG
Bartolo (2014)09AOHDP204J09AOHDP204JKF853796None  V11II13V, K14R, K20I, M36I, N37S, R41K, H69K, L89MCRF02_AG
 09AOHDP1809AOHDP18KF853783None  V11II13V, K20V, M36I, R41K, L63P, H69K, L89MCRF02_AG
 09AOHDP3109AOHDP31KF853854None  V11IL10I, T12S, I13V, I15IV, L19P, K20I, E35D, M36I, R41K, L63LV, C67C*WY, H69K, L89MCRF02_AG
 09AOHDP29009AOHDP290KF853846None  V11IT12S, I13V, K14R, K20I, E35D, M36I, N37E, R41K, D60E, H69K, L89MCRF02_AG