| Author (yr) |
Patient |
Isolate |
Acc# |
PIs |
Wks | PIMajorDRMs |
PIMinorDRMs |
OtherMut | Subtype |
| Cornelissen (1997) | 92TH022 | 92TH022 | AF009392 | None | | | | E35D, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| Piyasirisilp (2000) | SP_2F | SP_2F | AY008714 | None | | | | E35D, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| Caumont (2001) | AC36 | AC36 | AF326184 | None | | | | I13V, E35D, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| Fonjungo (2002) | CM93 | CM93 | AF406730 | None | | | | I13V, K20R, E35N, M36I, N37D, R41K, H69K, L89M, I93L | CRF01_AE |
| | CM117 | CM117 | AF406709 | None | | | | I13V, K20R, E35D, M36I, N37D, R41K, H69K, L89M, I93L | CRF01_AE |
| Ariyoshi (2003) | JPN24 | JPN24 | AY900872 | None | | | L33F | T12S, I13V, M36I, N37D, R41K, K45KE, H69K, K70R, L89M, I93L | CRF01_AE |
| Huang (2003) | NP1465 | NP1465 | AF447827 | None | | | | I15V, E35D, M36I, R41K, L63P, H69K, L89M, I93L | CRF01_AE |
| Jorgensen (2003) | JLB_Pat33 | HIM419459 | AJ419459 | None | | | | I13V, L19LM, K20KR, M36I, R41K, L63P, H69K, L89M, I93L | CRF01_AE |
| Lan (2003) | NTHvr103 | NTHvr103 | AY238268 | None | | | | G16E, E35D, M36I, R41K, D60E, H69K, L89M, I93L | CRF01_AE |
| | NTHvr122 | NTHvr122 | AY238229 | None | | | | I15IV, E35D, M36I, R41K, L63LP, H69K, L89M, I93L | CRF01_AE |
| | NTHvr140 | NTHvr140 | AY238247 | None | | | | G16E, E35D, M36I, R41K, D60E, L63C, H69K, I72IV, L89M, I93L | CRF01_AE |
| | NTHvr150 | NTHvr150 | AY238145 | None | | | | G16E, K20R, E35D, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | NTHvr151 | NTHvr151 | AY238255 | None | | | | G16E, E35D, M36I, R41K, L63C, H69K, L89M, I93L | CRF01_AE |
| | NTHvr164 | NTHvr164 | AY238266 | None | | | | I15V, G16E, E35D, M36I, R41K, L63C, H69K, L89M, I93L | CRF01_AE |
| | NTHvr169 | NTHvr169 | AY238205 | None | | | | G16GE, E35D, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | NTHvr171 | NTHvr171 | AY238207 | None | | | | G16E, E35D, M36I, R41K, L63C, H69K, L89M, I93L | CRF01_AE |
| | NTHvr177 | NTHvr177 | AY238147 | None | | | | G16E, E35D, M36I, R41K, H69K, K70R, L89M, I93L | CRF01_AE |
| | NTHvr184 | NTHvr184 | AY238219 | None | | | | K14R, E35ED, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | NTHvr185 | NTHvr185 | AY238220 | None | | | | I13V, E35D, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | NTHvr188 | NTHvr188 | AY238221 | None | | | | G16E, E35D, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | NTHvr198 | NTHvr198 | AY238290 | None | | | | I15V, E35D, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | NTHvr38 | NTHvr38 | AY238185 | None | | | | G16E, E35D, M36I, R41K, L63C, H69K, T80TK, L89M, I93L | CRF01_AE |
| | NTHvr39 | NTHvr39 | AY238179 | None | | | | I13V, K14R, G16E, E35D, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | NTHvr44 | NTHvr44 | AY238150 | None | | | | K20R, E35D, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | NTHvr45 | NTHvr45 | AY238187 | None | | | | G16E, L19R, E35D, M36I, R41K, L63C, H69K, L89M, I93L | CRF01_AE |
| | NTHvr52 | NTHvr52 | AY238194 | None | | | | G16A, K20KR, E35D, M36I, N37D, R41K, H69K, K70R, L89M, I93L | CRF01_AE |
| | NTHvr53 | NTHvr53 | AY238151 | None | | | L33F | E35D, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | NTHvr67 | NTHvr67 | AY238200 | None | | | | I13IV, T31TI, E35D, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | NTHvr74 | NTHvr74 | AY238314 | None | | | | L10LP, G16E, L19LM, E35D, M36I, R41K, L63LV, H69K, P79PH, N83NY, L89M, I93L | CRF01_AE |
| | NTHvr75 | NTHvr75 | AY238315 | None | | | | I13IV, E35D, M36I, R41K, L63LP, H69K, V77I, V82I, L89M, I93L | CRF01_AE |
| | NTHvr98 | NTHvr98 | AY238310 | None | | | | G16E, E35D, M36I, R41K, L63A, H69K, L89M, I93L | CRF01_AE |
| Ramos (2003) | 1269 12_69 | 1269 12_69 | AF490973 | None | | | | L10I, I13V, E35D, M36I, R41K, L63P, E65G, I93L | CRF01_AE |
| | TH9_95 | TH9_95 | AF490974 | None | | | | I13V, E35D, M36I, N37D, R41K, L63P, I93L | CRF01_AE |
| | TH1326 | TH1326 | AY082968 | None | | | | T12P, L19V, E35D, L63P, I64V, I93L | CRF01_AE |
| Tovanabutra (2004) | 00THOUR595I | 00_595I | AY358052 | None | | | | E35D, M36I, R41K, L63P, H69K, L89M, I93L | CRF01_AE |
| | 01THOUR033I | 01_033I | AY358071 | None | | | | E35D, M36I, R57K, H69K, V82I, I93L | CRF01_AE |
| | 02THOUR846I | 02_846I | AY358072 | None | | | | L63P, I93L | CRF01_AE |
| Hsu (2005) | LYH_AY870195 | BAA161379 | AY870195 | None | | | | T12I, G16E, K20R, E35D, M36I, R41K, R57K, H69K, L89M, I93L | CRF01_AE |
| | LYH_AY870216 | BAA161404 | AY870216 | None | | | | I13V, G16E, E35D, M36I, G40GE, R41K, Q61QE, H69K, K70KR, L89M, I93L | CRF01_AE |
| | LYH_AY870218 | BAA161407 | AY870218 | None | | | L33F | I13V, G16E, E35D, M36I, R41K, L63S, H69K, K70R, L89I, I93L | CRF01_AE |
| | LYH_AY870220 | BAA161409 | AY870220 | None | | | | I13V, M36I, R41K, L63P, H69K, L89M, I93L | CRF01_AE |
| | BAA148360 | BAA148360 | AY870145 | None | | | | G16A, E35D, M36I, R41K, L63P, H69K, I72V, L89M, I93L | CRF01_AE |
| | BAA148364 | BAA148364 | AY870149 | None | | | | K14R, G16E, E35D, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | BAA150620 | BAA150620 | AY870157 | None | | | | I13V, G16E, E35D, M36I, R41K, L63P, H69K, L89M, I93L | CRF01_AE |
| | BAA161414 | BAA161414 | AY870224 | None | | | | I13V, I15V, E35D, M36I, R41K, L63P, H69K, V82I, L89M, I93L | CRF01_AE |
| | BAA161440 | BAA161440 | AY870236 | None | | | | I13V, I15V, E35D, M36I, R41K, D60E, H69K, L89M, I93L | CRF01_AE |
| Laeyendecker (2005) | Pingxiang-2 | P2 | AY635691 | None | | | | G16E, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | Pingxiang-187 | P187 | AY635710 | None | | | | T12A, I13V, G16E, E34*, E35D, M36I, R41K, K55M, H69K, L89M, I93L | CRF01_AE |
| | Pingxiang-201 | P201 | AY635711 | None | | | | T12TA, E34E*, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | Binyang-527 | B527 | AY635742 | None | | | | I13V, E35D, M36I, R41K, H69R, L89M, I93L | CRF01_AE |
| | Binyang-528 | B528 | AY635743 | None | | | | I13V, E34E*, E35D, M36I, R41K, H69R, L89M, I93L | CRF01_AE |
| Ly (2005) | NL_KHM_CA13 | KHM_CA13 | DQ013523 | None | | | | I15V, G16A, E35D, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | NL_KHM_CA2 | KHM_CA2 | DQ013515 | None | | | | T12A, E35D, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | NL_KHM_CA42 | KHM_CA42 | DQ013548 | None | | | | L19M, K20R, M36I, N37D, R41K, L63C, H69K, L89M, I93L | CRF01_AE |
| | NL_KHM_CA6 | KHM_CA6 | DQ013518 | None | | | | E35D, M36I, R41K, L63P, H69K, L89M, I93L | CRF01_AE |
| | NL_KHM_CD14 | KHM_CD14 | DQ013644 | None | | | L33F | I13V, K14R, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | NL_KHM_CD15 | KHM_CD15 | DQ013645 | None | | | | E35D, M36I, R41K, H69K, T74S, L89M, I93L | CRF01_AE |
| | NL_KHM_CD22 | KHM_CD22 | DQ013652 | None | | | | I13V, K20R, M36I, R41N, L63P, H69K, L89M, I93L | CRF01_AE |
| | NL_KHM_HM24 | KHM_HM24 | DQ013590 | None | | | | T12TA, I15V, K20R, E35D, M36I, R41K, Q61E, H69K, L89M, I93L | CRF01_AE |
| | NL_KHM_HM35 | KHM_HM35 | DQ013599 | None | | | | I13V, E35D, M36I, R41K, D60E, H69K, V77I, L89M, I93L | CRF01_AE |
| | NL_KHM_HM6 | KHM_HM6 | DQ013573 | None | | | | G16E, K20R, M36I, N37NT, R41K, L63C, H69K, L89M, I93L | CRF01_AE |
| | NL_KHM_HM7 | KHM_HM7 | DQ013574 | None | | | | K20R, E35D, M36I, R41K, L63C, H69K, L89M, I93L | CRF01_AE |
| | NL_KHM_SOS3 | KHM_SOS3 | DQ013612 | None | | | | I13V, K14R, G16E, M36I, N37D, R41K, H69K, L89M, I93L | CRF01_AE |
| | NL_KHM_SOS6 | KHM_SOS6 | DQ013615 | None | | | | I15V, G16E, K20R, E35D, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| Tee (2005) | 04MYKL1897 | 04_1897 | AY904609 | None | | | | I13V, E35D, M36I, R41K, L63P, H69T, K70R, A71V, I72V, V77I, I93L | CRF01_AE |
| | 03MYKL1579 | 03_1579 | AY904566 | None | | | | E35D, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | 04MYKL1756 | 04_1756 | AY904595 | None | | | | I15V, K20R, E35D, M36I, R41K, L63P, H69K, L89M, I93L | CRF01_AE |
| | 04MYKL1612 | 04_1612 | AY904565 | None | | | L33F | I13V, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | 03MYKL1401 | 03_1401 | AY904524 | None | | | | E35D, M36I, R41K, I62V, L63P, H69K, L89M, I93L | CRF01_AE |
| | 04MYKL1769 | 04_1769 | AY904589 | None | | | | I13V, K20R, M36I, R41K, L63P, H69K, L89M, I93L | CRF01_AE |
| | 04MYKL1770 | 04_1770 | AY904596 | None | | | | I13V, E35D, M36I, R41K, K45R, H69K, L89M, I93L | CRF01_AE |
| Babic (2006) | DB_SI900-02 | SI900-02 | AJ971134 | None | | | | E35D, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| Lindstrom (2006) | SIIDC0282 | SIIDC0282 | | None | | | | I13IV, G17E, K20R, E35D, M36I, R41K, H69K, I72V, L89M, I93L | CRF01_AE |
| Tee (2006) | MYKL1477 | 03MYKL1477 | AY960938 | None | | | | I13V, E35N, M36I, R41K, Y59D, H69K, I72V, T74S, L89M, I93L | CRF01_AE |
| Tee (2006) | KL043 | 05_043.1 | DQ366666 | None | | | | G16E, H69K, V77I, I93L | CRF01_AE |
| Watanaveeradej (2006) | 99TH_C1080 | 99_C1080 | AY945712 | None | | | | I13V, K20R, E35D, M36I, R41K, H69K, V82I, L89M, I93L | CRF01_AE |
| Gatanaga (2007) | C03-51110102-1 | C03-51110102-1 | AB640202 | None | | | | I13V, E35D, M36I, R41K, K45R, R57K, H69K, L89M, I93L | CRF01_AE |
| | C03-51110118-1 | C03-51110118-1 | AB640218 | None | | | | K20R, E35D, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | C04-51110130-1 | C04-51110130-1 | AB640230 | None | | | | L10LI, I15V, K20KR, E35D, M36I, R41K, L63P, H69K, L89M, I93L | CRF01_AE |
| | C04-51110194-1 | C04-51110194-1 | AB640294 | None | | | | E35D, M36I, R41K, L63LP, H69K, A71V, I93L | CRF01_AE |
| | C03-5555-5264-1 | C03-5555-5264-1 | AB640362 | None | | | | T12A, E35D, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | C04-5555-5972-1 | C04-5555-5972-1 | AB640408 | None | | | | I15V, K20R, E35D, M36I, R41K, L63LP, H69K, L89M, I93L | CRF01_AE |
| | C04-5555-6124-1 | C04-5555-6124-1 | AB640430 | None | | | | I13V, G16E, M36I, R41RK, G49GE, D60E, L63LP, E65EK, H69K, K70R, L89M, I93L | CRF01_AE |
| | C03-2066158-1 | C03-2066158-1 | AB640467 | None | | | | I15V, K20R, E35D, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | C03-2066191-1 | C03-2066191-1 | AB640474 | None | | | | T12TI, I15V, K20IR, E35D, M36I, R41K, K45X, H69K, L89M, I93L | CRF01_AE |
| | C04-2066202-1 | C04-2066202-1 | AB640478 | None | | | | T12P, I13V, K20R, M36I, R41K, L63P, H69K, L89M, I93L | CRF01_AE |
| Hai-Long (2007) | Fj052 | Fj052 | EF036528 | None | | | | P9L, I13V, K20R, M36I, R41K, L63P, H69K, L89M, I93L | CRF01_AE |
| | Fj065 | Fj065 | EF036534 | None | | | | K20R, M36I, N37D, R41K, D60E, H69K, L89M, I93L | CRF01_AE |
| Han (2007) | LN40 | 02CNLN40 | EF122524 | None | | | | I13V, K20R, E35D, M36I, N37D, R41K, R57K, H69K, K70R, L89M, I93L | CRF01_AE |
| | LN42 | 02CNLN42 | EF122527 | None | | | | L19M, E35D, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | LN52 | 03CNLN52 | EF122532 | None | | | | I13V, G16E, L19V, E35D, M36I, R41K, H69K, K70R, L89M, I93L | CRF01_AE |
| | LN64 | 04CNLN64 | EF122536 | None | | | | I13V, L19M, E35D, M36I, R41K, R57K, H69K, L89M, I93L | CRF01_AE |
| | LN76 | 04CNLN76 | EF122541 | None | | | | L19M, E35D, M36I, R41K, H69K, V82I, L89M, I93L | CRF01_AE |
| | LN59 | 03CNLN59 | EF122554 | None | | | | T12P, K14R, G16E, E35D, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| Liu (2007) | fj13 | fj13 | EF432666 | None | | | | I13V, K20R, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | fj25 | fj25 | EF432671 | None | | | | I13V, K20R, M36I, R41K, H69K, N83S, L89M, I93L | CRF01_AE |
| | fj39 | fj39 | EF432674 | None | | | | I13V, E35D, M36I, R41K, K55R, L63P, H69K, L89M, I93L | CRF01_AE |
| | fj44 | fj44 | EF432677 | None | | | L33F | I13V, M36I, R41K, L63I, H69K, V77I, L89M, I93L | CRF01_AE |
| | fj45 | fj45 | EF432678 | None | | | | E35D, M36I, R41K, H69K, T74S, L89M, I93L | CRF01_AE |
| | fj49 | fj49 | EF432682 | None | | | | G16E, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | fj52 | fj52 | EF432685 | None | | | | L10I, G16E, M36I, R41K, K43R, R57K, Q61D, A71T, I72R, I93L | CRF01_AE |
| | fj58 | fj58 | EF432688 | None | | | | M36I, N37D, R41K, H69R, L89M, I93L | CRF01_AE |
| | fj59 | fj59 | EF432689 | None | | | | E35D, M36I, R57K, H69K, V82I, L89M, I93L | CRF01_AE |
| | fj62 | fj62 | EF432692 | None | | | | G16E, K20R, E35D, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | fj63 | fj63 | EF432693 | None | | | | G16E, K20R, E35D, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | fj74 | fj74 | EF432698 | None | | | | I13V, M36I, R41K, L63P, H69K, K70R, T74S, L89M, I93L | CRF01_AE |
| | fj75 | fj75 | EF432699 | None | | | | E35D, M36I, R41K, H69K, K70R, L89M, I93L | CRF01_AE |
| | fj76 | fj76 | EF432700 | None | | | | I13V, M36I, R41K, H69R, L89M, I93L | CRF01_AE |
| | fj80 | fj80 | EF432704 | None | | | | K14R, E35D, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | fj93 | fj93 | EF432709 | None | | | | E35D, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | fj96 | fj96 | EF432711 | None | | | | I13V, E35D, M36I, R41K, K45R, L63P, H69K, L89M, I93L | CRF01_AE |
| | fj18 | fj18 | EF432716 | None | | | | K20R, E35D, M36I, N37D, R41K, L63P, H69K, L89M, I93L | CRF01_AE |
| | fj06 | fj06 | EF432717 | None | | | | K20R, E35D, M36I, N37D, R41K, D60E, H69K, L89M, I93L | CRF01_AE |
| | fj03 | fj03 | EF432725 | None | | | L33F | I13V, K14R, E35D, M36I, R41K, L63P, H69K, L89M, I93L | CRF01_AE |
| Liu (2007) | SH070 | SH070 | EU079109 | None | | | | I15V, E35D, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| Zhong (2007) | D0010 | 05CN_010 | EF199557 | None | | | | Q2H, E35D, M36I, R41K, L63S, I64M, H69K, L89M, I93L | CRF01_AE |
| | D0024 | 05CN_024 | EF199566 | None | | | | E35D, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | D0027 | 05CN_027 | EF199569 | None | | | | M36I, R41K, L63S, H69K, K70R, L89M, I93L | CRF01_AE |
| | D0055 | 05CN_055 | EF199587 | None | | | | K20R, E35D, M36I, R41K, L63P, H69K, K70R, L89M, I93L | CRF01_AE |
| | D0061 | 05CN_061 | EF199592 | None | | | | K20R, E35D, M36I, R41K, L63S, H69K, K70R, V82I, L89M, I93L | CRF01_AE |
| | D0086 | 05CN_086 | EF199614 | None | | | | G16E, K20R, E35D, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | D0088 | 05CN_088 | EF199616 | None | | | | K20R, E35D, M36I, R41K, L63S, H69K, K70R, V82I, L89M, I93L | CRF01_AE |
| Bang (2008) | 003 | BJH_003 | EF157859 | None | | | | K20R, E35ED, M36I, R41K, L63LP, H69K, L89M, I93L | CRF01_AE |
| Chang (2008) | TW0103a | TW0103a | | None | | | | I13V, K20R, M36I, R41K, K55X, L63P, H69K, L89M, I93L | CRF01_AE |
| | TW0378a | TW0378a | | None | | | | I13V, G16E, K20R, E35D, M36I, R41K, K43KR, K45R, L63P, H69K, L89IM, I93L | CRF01_AE |
| | TW10076a | TW10076a | | None | | | | K20R, E35D, M36I, R41K, I54X, H69K, L89M, I93L | CRF01_AE |
| | TW10277a | TW10277a | | None | | | | I13V, E35D, M36I, R41K, K45R, L63P, H69K, L89M, I93L | CRF01_AE |
| | TW10350a | TW10350a | | None | | | | T12P, E35D, M36I, R41K, L63P, I93L | CRF01_AE |
| | TW10440a | TW10440a | | None | | | | G16E, E35D, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | TW10446a | TW10446a | | None | | | | I13V, I15V, E35D, M36I, R41K, H69K, T74X, L89M, I93L | CRF01_AE |
| | TW9940a | TW9940a | | None | | | | G16E, E35D, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | TW10566a | TW10566a | | None | | | | I13V, I15V, E35D, M36I, R41K, L63X, H69K, L89M, T91V, I93L | CRF01_AE |
| | TW5297a | TW5297a | | None | | | | L5F, G16E, K20R, E35D, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | TW11115a | TW11115a | | None | | | | G17R, L19M, K20R, M36I, N37D, R41K, H69K, N83H, L89M, I93L | CRF01_AE |
| | TW7700a | TW7700a | | None | | | | I13V, G16E, K20R, E35D, M36I, R41K, D60E, H69K, L89M, I93L | CRF01_AE |
| Holguin (2008) | SP41-58559 | SP41-58559 | EU342821 | None | | | | T12S, K14R, I15V, L19V, K20R, M36I, R41K, R57K, Q61H, L63T, H69K, L89M, I93L | CRF01_AE |
| Ibe (2008) | 261 | 261 | AB356105 | None | | | L33F | T4TS, I13V, M36I, R41K, H69K, K70R, V77VI, L89M, I93L | CRF01_AE |
| | 115 | 115 | AB356173 | None | | | | T12A, I15V, E35D, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | 164 | 164 | AB356211 | None | | | | E35D, M36I, R41K, L63P, H69K, I72V, T74S, V77I, L89M, I93L | CRF01_AE |
| | 209 | 209 | AB356240 | None | | | | I13V, I15V, E35D, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | 234 | 234 | AB356261 | None | | | | K14KR, I15IV, K20R, E35D, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | 458 | 458 | AB356421 | None | | | | M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| Nguyen (2008) | 001 | VN001 | | None | | | | I13V, E35D, M36I, R41K, H69K, T74S, L89M, I93L, F99X | CRF01_AE |
| | 013 | VN013 | | None | | | | M36I, R41K, L63P, H69K, L89M, I93L, F99X | CRF01_AE |
| | 015 | VN015 | | None | | | | E35D, M36I, R41K, L63LP, H69K, L89M, I93L, F99X | CRF01_AE |
| | 030 | VN030 | | None | | | | I13V, G16E, K20I, M36I, R41K, G52X, H69K, K70R, T74A, L89M, I93L | CRF01_AE |
| | 033 | VN033 | | None | | | | I13V, K20R, M36I, R41K, G68X, H69K, A71G, V82I, L89M, I93L, F99X | CRF01_AE |
| | 049 | VN049 | | None | | | | G16E, E35D, M36I, R41K, L63LIPT, H69K, L89M, I93L, F99X | CRF01_AE |
| | 052 | VN052 | | None | | | | I13V, E35D, M36I, R41K, H69K, L89M, I93L, F99X | CRF01_AE |
| Riddler (2008) | 81177 | 520793Ib | | None | | | | G16E, E35D, M36I, R41K, L63P, H69K, K70R, L89M, I93L | CRF01_AE |
| Sirivichayakul (2008) | BED-9 | BED-9Pr | JQ364267 | None | | | | I13V, M36I, R41K, D60E, Q61E, L63P, H69K, L89M, I93L | CRF01_AE |
| | BED-11 | BED-11Pr | JQ364269 | None | | | | K20R, E35D, M36I, R41K, L63P, H69K, L89M, I93L | CRF01_AE |
| | BED-31 | BED-31Pr | JQ364283 | None | | | | E35D, M36I, R41K, L63P, H69K, K70R, L89M, I93L | CRF01_AE |
| | BED-32 | BED-32Pr | JQ364284 | None | | | | G16E, E35N, M36I, R41K, L63S, H69K, I72V, I93L | CRF01_AE |
| | BED-35 | BED-35Pr | JQ364287 | None | | | | E35D, M36I, R41K, Q61E, L63P, H69K, I72M, L89M, I93L | CRF01_AE |
| | BED-36 | BED-36Pr | JQ364288 | None | | | | G16E, E35N, M36V, R41K, L63S, H69K, L89M, I93L | CRF01_AE |
| | BED-41 | BED-41Pr | JQ364293 | None | | | | I13V, M36I, R41K, D60E, Q61E, L63P, H69K, L89M, I93L | CRF01_AE |
| | BED-42 | BED-42Pr | JQ364294 | None | | | | I13V, M36I, R41K, D60E, Q61E, L63P, H69K, L89M, I93L | CRF01_AE |
| | BED-48 | BED-48Pr | JQ364298 | None | | | | L10I, I13V, E35D, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | NBC-45 | NBC-45Pr | JQ364343 | None | | | | E35D, M36I, R41K, L63T, H69K, V82I, L89M, I93L | CRF01_AE |
| Wang (2008) | CYM009 | CYM009 | EU921960 | None | | | | E35D, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| Auwanit (2009) | 21 | AE-PR21 | | None | | | | I13V, E35D, M36I, R41K, H69K, V82I, L89M, I93L | CRF01_AE |
| | 69 | AE-PR69 | FJ463522 | None | | | | E35D, M36I, R41K, Q61QH, L63P, H69K, L89M, I93L | CRF01_AE |
| | 91 | AE-PR91 | FJ463527 | None | | | | I13V, I15V, K20R, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | 111 | AE-PR111 | FJ463533 | None | | | | K20R, E35D, M36I, R41K, Q61E, L63P, H69K, L89M, I93L | CRF01_AE |
| Ayouba (2009) | FD0323 | FD0323PI | GQ352058 | None | | | | E35D, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | FD0457 | FD0457PI | GQ352067 | None | | | | K20R, E35D, M36I, R41K, L63P, H69K, L89M, I93L | CRF01_AE |
| | FD0524 | FD0524PI | GQ352074 | None | | | | G16E, E35D, M36I, R41K, R57K, H69K, K70R, L89M, I93L | CRF01_AE |
| | FD0527 | FD0527PI | GQ352077 | None | | | | I15V, G16E, K20R, E35D, M36I, H69K, L89M, I93L | CRF01_AE |
| | FD0651 | FD0651PI | GQ352091 | None | | | | G16E, E35D, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | FD0671 | FD0671PI | GQ352092 | None | | | | I13V, K20R, E35ED, M36I, R41K, L63P, H69K, L89M, I93L | CRF01_AE |
| | FD0837 | FD0837PI | GQ352103 | None | | | | G16E, K20R, E35D, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | R22 | R22_PR | GQ352123 | None | | | | G16E, E35D, M36I, R41KN, K43R, L63C, H69K, L89M, I93L | CRF01_AE |
| | R29 | R29_PR | GQ352130 | None | | | | I13V, I15V, L19Q, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | R32 | R32_PR | GQ352133 | None | | | | I13V, I15V, K20I, M36I, R41K, L63P, H69K, V82I, L89M, I93L | CRF01_AE |
| | R33 | R33_PR | GQ352134 | None | | | | I13V, I15V, E35D, M36I, R41RK, I66IF, H69K, K70KE, V82I, I85IV, L89M, I93L | CRF01_AE |
| | R37 | R37_PR | GQ352138 | None | | | | I15V, E35D, M36I, R41K, L63P, H69K, V82I, L89M, I93L | CRF01_AE |
| | R46 | R46_PR | GQ352145 | None | | | | I13V, E35D, M36I, R41K, R57K, L63C, H69K, L89M, I93L | CRF01_AE |
| | R55 | R55_PR | GQ352153 | None | | | | G16E, E35D, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | R63 | R63_PR | GQ352161 | None | | | | G16E, E35D, M36I, R41K, L63C, H69K, L89M, I93L | CRF01_AE |
| | R71 | R71_PR | GQ352165 | None | | | | I15IV, G16E, K20KR, E35D, M36I, R41K, L63C, H69K, K70R, L89M, I93L | CRF01_AE |
| | R72 | R72_PR | GQ352166 | None | | | | I15V, G16E, E35D, M36I, R41K, L63C, H69K, L89M, I93L | CRF01_AE |
| Brumme (2009) | M6571 | M6571 | GQ372015 | None | | | | E35D, M36I, R41K, R57RK, L63P, H69K, L89M, I93L | CRF01_AE |
| | Q9575 | Q9575 | GQ372120 | None | | | | E35ED, M36I, R41K, R57RK, L63P, H69K, L89M, I93L | CRF01_AE |
| Castillo (2009) | 14 | 14PROT | GQ202901 | None | | | | K14R, G16E, E35D, M36I, R41K, H69K, K70R, L89M, I93L | CRF01_AE |
| Cuevas (2009) | X2721_1 | X2721_1 | GU326188 | None | | | | I13V, M36I, P39S, R41K, D60E, Q61E, L63P, H69K, L89M, I93L | CRF01_AE |
| Fujisaki (2009) | 709 | 709 | AB442352 | None | | | | I13V, I15V, K20R, M36I, R41K, L63P, H69K, L89M, I93L | CRF01_AE |
| Ishizaki (2009) | C2 | C2g | FJ006952 | None | | | | K14R, G16E, K20R, M36I, R41K, R57K, H69K, L89M, I93L | CRF01_AE |
| | C11 | C11g | FJ006956 | None | | | | I13V, G16A, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | C19 | C19 | FJ006962 | None | | | | I15V, M36I, R41K, L63P, H69K, L89M, I93L | CRF01_AE |
| | C25 | C25 | FJ006967 | None | | | | I13V, E35D, M36I, R41K, H69K, T74S, L89M, I93L | CRF01_AE |
| | C78 | C78ca | FJ006979 | None | | | | G16E, E35D, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | A2_67 | A2_67 | FJ006999 | None | | | | K20R, E35D, M36I, R41K, L63P, H69K, L89M, I93L | CRF01_AE |
| | A2_103 | A2_103t | FJ007006 | None | | | | E35D, M36I, R41K, L63P, H69K, L89M, I93L | CRF01_AE |
| | A2_129 | A2_129 | FJ007011 | None | | | | E35D, M36I, R41K, L63T, H69K, L89M, I93L | CRF01_AE |
| | A2_168 | A2_168ta | FJ007022 | None | | | | M36L, N37T, R41K, H69K, L89M, I93L | CRF01_AE |
| | A2_231 | A2_231 | FJ007043 | None | | | | M36I, R41K, L63P, H69K, L89M, I93L | CRF01_AE |
| | A2_236 | A2_236aa | FJ007045 | None | | | | I13V, I15V, K20R, E35D, M36I, N37D, R41K, H69K, V82I, L89M, I93L | CRF01_AE |
| | A2_245 | A2_245g | FJ007053 | None | | | | G16E, E35D, M36I, R41K, H69K, I72V, L89M, I93L | CRF01_AE |
| | A2_362 | A2_362a | FJ007075 | None | | | | G16E, M36I, R41K, L63C, H69K, L89M, I93L | CRF01_AE |
| | A2_470 | A2_470 | FJ007108 | None | | | | E35D, M36I, N37D, R41K, L63P, H69K, L89M, I93L | CRF01_AE |
| | A64 | A64a | FJ007134 | None | | | | I13V, K20R, M36I, R41K, H69K, V82I, L89M, I93L | CRF01_AE |
| | A75 | A75ag | FJ007138 | None | | | | E35D, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | A78 | A78g | FJ007140 | None | | | | I13V, K20R, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | A101 | A101g | FJ007151 | None | | | | M36I, R41K, L63P, H69K, L89M, I93L | CRF01_AE |
| | A132 | A132a | FJ007165 | None | | | | I13V, M36I, R41K, L63P, H69K, L89M, I93L | CRF01_AE |
| | A167 | A167gg | FJ007185 | None | | | | M36I, R41K, L63P, H69K, L89M, I93L | CRF01_AE |
| | A199 | A199 | FJ007208 | None | | | | K20R, E35D, M36I, N37D, R41K, H69K, L89M, I93L | CRF01_AE |
| | A203 | A203 | FJ007211 | None | | | | L19M, E35D, M36I, R41K, H69K, K70R, V82I, L89M, I93L | CRF01_AE |
| | A219 | A219 | FJ007216 | None | | | | I15V, G16E, K20R, E35D, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | A244 | A244gaga | FJ007231 | None | | | | M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | A246 | A246 | FJ007234 | None | | | | M36I, R41K, L63P, H69K, L89M, I93L | CRF01_AE |
| | A248 | A248 | FJ007235 | None | | | | I13V, E35D, M36I, R41K, K45R, H69K, A71T, L89M, I93L | CRF01_AE |
| | A287 | A287 | FJ007255 | None | | | | G16E, E35D, M36I, R41K, D60E, H69K, L89M, I93L | CRF01_AE |
| | A298 | A298 | FJ007262 | None | | | | I13V, E35D, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | A315 | A315 | FJ007268 | None | | | | I15V, E35D, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | A321 | A321 | FJ007273 | None | | | | G16A, E35D, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | A323 | A323g | FJ007274 | None | | | | E35D, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | A361 | A361a-07 | FJ007298 | None | | | | G16E, K20R, E35D, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | A368 | A368c | FJ007300 | None | | | | G16A, E35D, M36I, R41K, R57K, L63C, H69K, L89M, I93L | CRF01_AE |
| | A388 | A388ct | FJ007305 | None | | | | I13V, M36I, R41K, L63P, H69K, T74S, L89M, I93L | CRF01_AE |
| | A408 | A408 | FJ007319 | None | | | | G16E, E35D, M36I, R41K, K45R, L63P, H69K, L89M, I93L | CRF01_AE |
| | A442 | A442aga | FJ007329 | None | | | | G16E, E35D, M36I, R41K, D60E, L63P, H69K, L89M, I93L | CRF01_AE |
| | A452 | A452 | FJ007332 | None | | | | I13V, G16E, E35D, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | A458 | A458g | FJ007334 | None | | | | G16A, E35D, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | A496 | A496 | FJ007345 | None | | | | I15V, E35D, M36I, R41K, L63P, H69K, L89M, I93L | CRF01_AE |
| | A2_90 | A2_90 | FJ007364 | None | | | | I13V, E35D, M36I, R41K, H69K, A71V, L89M, I93L | CRF01_AE |
| | A2_367 | A2_367a | FJ007366 | None | | | | G16E, L19MV, M36I, R41K, L63C, H69K, L89M, I93L | CRF01_AE |
| Lee (2009) | S07004 | S07004 | EU715178 | None | | | | I13V, K20KR, E35D, M36I, R41K, L63LP, H69K, L89M, I93L | CRF01_AE |
| | S07026 | S07026 | EU715185 | None | | | | K20R, E35D, M36I, R41K, R57K, H69K, V77I, L89M, I93L, L97I | CRF01_AE |
| | S07041 | S07041 | EU715190 | None | | | | I13V, I15IV, K20R, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | S07047 | S07047 | EU715221 | None | | | | I13V, E35D, M36I, R41K, H69K, L89M, I93L, L97I | CRF01_AE |
| | S07057 | S07057 | EU715231 | None | | | | K14KR, G16GA, E35D, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| Luo (2009) | wh.1466 | 05HBwh.1466 | FJ375090 | None | | | | I13V, G17E, K20R, M36I, R41K, H69K, K70R, L89M, I93L | CRF01_AE |
| Nouhin (2009) | KC14 | KC14PROT | FJ531951 | None | | | | L5LF, E35D, M36I, R41K, L63P, H69K, V82I, L89M, I93L | CRF01_AE |
| | KC17 | KC17PROT | FJ531954 | None | | | | L5LF, L19LV, E35D, M36I, R41K, L63C, H69K, L89M, I93L | CRF01_AE |
| | KC21 | KC21PROT | FJ531958 | None | | | | I13V, G17E, K20R, M36I, L63C, H69K, L89M, I93L | CRF01_AE |
| | KC23 | KC23PROT | FJ531960 | None | | | | M36D_*, R41K, H69K, I72V, L89M, I93L | CRF01_AE |
| | KC27 | KC27PROT | FJ531964 | None | | | | I15V, E35D, M36I, R41K, G51GA, H69K, V82I, L89M, I93L | CRF01_AE |
| | KC32 | KC32PROT | FJ531969 | None | | | | I13V, K20R, E35D, M36I, R41K, L63P, H69K, L89M, I93L | CRF01_AE |
| | KC38 | KC38PROT | FJ531972 | None | | | | G16E, E35D, M36I, R41K, D60E, H69K, K70R, L89M, I93L | CRF01_AE |
| | KC40 | KC40PROT | FJ531974 | None | | V82VL | | G16E, G17GR, E35D, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | KC41 | KC41PROT | FJ531975 | None | | | | L5LF, K20R, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | KC44 | KC44PROT | FJ531978 | None | | | | L5LF, E21EK, E34EK, E35D, M36I, R41K, C67CW, H69K, L89M, I93L | CRF01_AE |
| | KC55 | KC55PROT | FJ531988 | None | | | | L5LF, I15Y, E35N, M36I, R41K, L63C, H69K, V82I, L89M, I93L | CRF01_AE |
| | KC56 | KC56PROT | FJ531989 | None | | | | L10LV, I13V, K20R, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | KC64 | KC64PROT | FJ531996 | None | | | | E35D, M36I, R41K, L63P, H69K, L89M, I93L | CRF01_AE |
| Tu (2009) | 5 | PBMC5 | EU518254 | None | | | | I13V, E35D, M36I, R41K, H69R, L89M, I93L | CRF01_AE |
| | | plasma5 | EU518303 | None | | | | I13V, E35D, M36I, R41K, H69R, L89M, I93L | CRF01_AE |
| | 7 | PBMC7 | EU518256 | None | | | | K20R, E35D, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | | plasma7 | EU518305 | None | | | | E35D, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| Vercauteren (2009) | pt2184 | 119654565 | GQ398840 | None | | | | E35D, M36I, R41K, R57K, H69K, L89M, I93L | CRF01_AE |
| | pt2134 | 436137206 | GQ398890 | None | | | | I13V, E35D, M36I, R41K, D60E, Q61E, L63P, H69K, L89M, I93L | CRF01_AE |
| | pt1890 | 1967767053 | GQ399134 | None | | | | K20KR, E35D, M36I, R41K, L63PS, H69K, L89M, I93L | CRF01_AE |
| | pt1748 | 2911024973 | GQ399276 | None | | | L33LF | I13V, M36I, R41K, L63LP, H69K, L89M, I93L | CRF01_AE |
| | pt1672 | 3311242754 | GQ399352 | None | | | | L10V, I13V, G16E, K20R, E35D, M36I, R41K, L63P, H69K, L89M, I93L | CRF01_AE |
| | pt1636 | 3560275832 | GQ399388 | None | | | | E35D, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | pt1339 | 5208160299 | GQ399685 | None | | | | I13V, K14R, I15V, M36I, R41K, D60E, L63P, C67Y, H69K, V82I, L89M, I93L | CRF01_AE |
| | pt1288 | 5461870282 | GQ399736 | None | | | | I15V, E35D, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | pt938 | 7618622649 | GQ400086 | None | | | | E35D, M36I, R41K, K45KR, L63P, H69K, L89M, I93L | CRF01_AE |
| | pt676 | 8lbpiAqEsc | GQ400348 | None | | | | K45KR, L63P, H69K, L89M, I93L | CRF01_AE |
| | pt472 | ajoMqRKfDo | GQ400552 | None | | | | K20R, E35D, M36I, R41K, L63LP, H69K, L89M, I93L | CRF01_AE |
| | pt444 | cLYp616hEj | GQ400580 | None | | | | W6G, G16E, E35D, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | pt411 | F5vimU1WoQ | GQ400613 | None | | | | L19I, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | pt355 | hZk8m1sWVV | GQ400669 | None | | | | E35D, M36I, R41K, Q61E, L63P, H69K, L89M, I93L | CRF01_AE |
| | pt323 | JULc9Y2qzk | GQ400701 | None | | | | E35D, M36I, R41K, H69K, V82I, L89M, I93L | CRF01_AE |
| | pt285 | lPONbZRtMk | GQ400739 | None | | | | E35D, M36I, R41K, H69K, V82I, L89M, I93L | CRF01_AE |
| | pt40 | Y4c4OC8AQS | GQ400984 | None | | | | I13V, E35D, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| Chin (2010) | C066 | C066 | GQ290704 | None | | | | I13V, G17E, K20R, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | C074 | C074 | GQ290707 | None | | | | I13V, G16A, L19M, E35D, M36I, R41K, L63P, H69K, L89M, I93L | CRF01_AE |
| | K219 | K219 | GQ290740 | None | | | | I13V, K20R, E35D, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| Djoko (2010) | GQ404 | 08GQ404 | FN557338 | None | | | | T12S, I15V, L19V, K20R, E35D, M36I, R41K, R57K, Q61H, L63V, I64M, H69K, L89M, I93L | CRF01_AE |
| Gonzalez (2010) | 924_M00m | 924_M00m | GQ427111 | None | | | | I13V, G16E, K20R, E35D, M36I, R41K, L63V, H69K, L89M, T91V, I93L | CRF01_AE |
| Han (2010) | LN090 | LN090 | FJ531406 | None | | | | K20R, E35D, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | LN103 | LN103 | FJ531408 | None | | | | G16E, L19V, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | LN109 | LN109 | FJ531411 | None | | | | I13V, L19M, E35D, M36I, R41K, H69K, V82I, L89M, I93L | CRF01_AE |
| | LN112 | LN112 | FJ531413 | None | | | | I13V, L19M, E35D, M36I, R41K, L63P, H69K, L89M, I93L | CRF01_AE |
| | LN114 | LN114 | FJ531415 | None | | | | I13V, G16A, L19M, E35D, M36I, R41K, R57K, L63P, H69K, L89M, I93L | CRF01_AE |
| | LN116 | LN116 | FJ531417 | None | | | | I13V, I15V, L19M, K20R, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | LN121 | LN121 | FJ531418 | None | | | | K20R, E35D, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | LN122 | LN122 | FJ531419 | None | | | | T12P, L19M, E35D, M36I, R41K, L63P, H69K, L89M, I93L | CRF01_AE |
| | LN128 | LN128 | FJ531424 | None | | | | I13V, G16E, L19I, E35D, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | LN132 | LN132 | FJ531425 | None | | | | I13V, L19M, E35D, M36I, R41K, R57K, H69K, V82I, L89M, I93L | CRF01_AE |
| | LN138 | LN138 | FJ531428 | None | | | L33F | I13V, G16A, L19M, E35D, M36I, R41K, G68E, H69K, K70R, L89M, I93L | CRF01_AE |
| | LN153 | LN153 | FJ531429 | None | | | | G16E, L19M, E35D, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | LN175 | LN175 | FJ531431 | None | | | | G16E, L19M, K20R, E35D, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | LN176 | LN176 | FJ531432 | None | | | | L19M, E35D, M36I, R41K, H69K, V82I, L89M, I93L | CRF01_AE |
| | LN179 | LN179 | FJ531434 | None | | | | I13V, G16E, L19V, E35D, M36I, R41K, L63V, H69K, K70R, L89M, I93L | CRF01_AE |
| | LN187 | LN187 | FJ531436 | None | | | | I13V, L19M, E35X, M36I, R41K, H69K, V82I, L89M, I93L | CRF01_AE |
| | LN203 | LN203 | FJ531441 | None | | | | L19M, E35D, M36I, N37D, R41K, H69K, L89M, I93L | CRF01_AE |
| | SY023 | SY023 | FJ531442 | None | | | | I13V, L19M, K20R, E35D, M36I, R41K, H69K, K70R, V82I, L89M, I93L | CRF01_AE |
| | SY041 | SY041 | FJ531443 | None | | | | L19M, E35D, M36I, R41K, H69K, V82I, L89M, I93L | CRF01_AE |
| | SY123 | SY123 | FJ531444 | None | | | | G16E, L19M, K20R, E35D, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | SY147 | SY147 | FJ531445 | None | | | | L19M, E35D, M36I, N37D, R41K, H69K, L89M, I93L | CRF01_AE |
| | LN106 | LN106 | FJ531447 | None | | | | I13V, G16E, L19V, E35D, M36I, R41K, L63V, H69K, K70R, L89M, I93L | CRF01_AE |
| | LN104 | LN104 | FJ531449 | None | | | | L19M, E35D, M36I, R41K, H69K, V82I, L89M, I93L | CRF01_AE |
| | LN152 | LN152 | FJ531454 | None | | | | I13V, L19M, E35D, M36I, R41K, R57K, H69K, K70R, V82I, L89M, I93L | CRF01_AE |
| | SY40 | SY40 | FJ531459 | None | | | | L19M, E35D, M36I, N37D, R41K, H69K, L89M, I93L | CRF01_AE |
| Jullaksorn (2010) | CR19 | CR19-Apr08D | GQ857297 | None | | | | G16E, E35D, M36I, R41K, K45R, L63P, H69K, L89M, I93L | CRF01_AE |
| | | CR19-Oct08D | GQ857361 | None | | | | G16E, E35D, M36I, R41K, K45R, L63P, H69K, L89M, I93L | CRF01_AE |
| | | CR19-Jan09D | GQ857394 | None | | | | G16E, E35D, M36I, R41K, K45R, L63P, H69K, L89M, I93L | CRF01_AE |
| | | CR19-Apr09D | GQ857425 | None | | | | G16E, E35D, M36I, R41K, K45R, L63P, H69K, L89M, I93L | CRF01_AE |
| | CR25 | CR25-Apr08D | GQ857303 | None | | | | E35D, M36I, R41K, K43R, L63P, H69K, L89M, I93L | CRF01_AE |
| | | CR25-Jul08D | GQ857335 | None | | | | E35D, M36I, R41K, L63P, H69K, L89M, I93L | CRF01_AE |
| | | CR25-Oct08D | GQ857366 | None | | | | E35D, M36I, R41K, L63P, H69K, L89M, I93L | CRF01_AE |
| | | CR25-Jan09D | GQ857400 | None | | | | G17E, E35D, M36I, R41K, K45R, G49E, L63P, E65K, H69K, L89M, I93L | CRF01_AE |
| | CR14 | CR14-Jul08R | GQ857325 | None | | | | E35D, M36I, R41K, R57K, I62V, H69R, L89M, I93L | CRF01_AE |
| | | CR14-Oct08R | GQ857356 | None | | | | E35D, M36I, R41K, I62V, H69R, L89M, I93L | CRF01_AE |
| | | CR14-Jan09R | GQ857389 | None | | | | E35D, M36I, R41K, I62V, H69R, L89M, I93L | CRF01_AE |
| | | CR14-Apr09D | GQ857420 | None | | | | E35D, M36I, R41K, I62V, H69R, L89M, I93L | CRF01_AE |
| Phan (2010) | ND16 | ND16 | AB519457 | None | | | | G16A, E35D, M36I, D60E, H69K, L89M, I93L | CRF01_AE |
| | ND24 | ND24 | AB519460 | None | | | | I15V, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | O901 | O901 | AB519473 | None | | | | K20R, M36I, R41K, H69K, V82I, L89M, I93L | CRF01_AE |
| | O907 | O907 | AB519478 | None | | | | G16E, L19I, E35D, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | O913 | O913 | AB519484 | None | | | | M36I, N37D, R41K, L63P, H69K, L89M, I93L | CRF01_AE |
| | O917 | O917 | AB519488 | None | | | | G16E, E35D, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | O918 | O918 | AB519489 | None | | | | I13V, G16E, K20R, E35D, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | O924 | O924 | AB519495 | None | | | | K20R, D25H, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | O930 | O930 | AB519501 | None | | | | I13V, K14R, G16A, E35D, M36I, R41K, L63P, H69K, L89M, I93L | CRF01_AE |
| | O934 | O934 | AB519505 | None | | | | G16E, E35D, M36I, R41K, L63C, H69K, I93L | CRF01_AE |
| | O943 | O943 | AB519513 | None | | | | E35R, M36I, R41K, L63P, H69K, V82I, L89M, I93L | CRF01_AE |
| | O944 | O944 | AB519514 | None | | | | I13V, G16E, M36I, R41K, L63P, H69K, L89M, I93L | CRF01_AE |
| | NB01 | NB01 | AB519523 | None | | | | I15V, G16E, E35D, M36I, R41K, H69R, V77I, V82I, L89M, I93L | CRF01_AE |
| | NB14 | NB14 | AB519531 | None | | | | G16E, K20R, E35D, M36I, R41K, L63C, H69K, L89M, I93L | CRF01_AE |
| | NB18 | NB18 | AB519533 | None | | | | G16E, M36I, R41K, L63P, H69K, L89M, I93L | CRF01_AE |
| | NB21 | NB21 | AB519534 | None | | | | G16E, E35D, M36I, R41K, L63C, H69K, L89M, I93L | CRF01_AE |
| | NB35 | NB35 | AB519543 | None | | | | M36I, R41K, L63P, H69K, L89M, I93L | CRF01_AE |
| | NB54 | NB54 | AB519556 | None | | | | K20R, M36I, R41K, H69K, V82I, L89M, I93L | CRF01_AE |
| | AH02 | AH02 | AB519559 | None | | | | E35D, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | AH04 | AH04 | AB519561 | None | | | | K20R, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | AH08 | AH08 | AB519565 | None | | | | E35D, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | AH13 | AH13 | AB519568 | None | | | | R8Q, I13V, E35D, M36I, R41K, D60E, H69K, L89M, I93L | CRF01_AE |
| | AH19 | AH19 | AB519571 | None | | | | I13V, K14R, M36I, R41K, L63P, H69K, V82I, L89M, I93L | CRF01_AE |
| | AH32 | AH32 | AB519581 | None | | | | I15V, G16E, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | AH35 | AH35 | AB519584 | None | | | | K20R, M36I, R41K, L63P, H69K, L89M, I93L | CRF01_AE |
| | AH42 | AH42 | AB519589 | None | | | | I15V, E35D, M36I, R41K, H69K, T74S, L89M, I93L | CRF01_AE |
| | AH49 | AH49 | AB519595 | None | | | | I13V, K20R, M36I, N37D, R41K, K43R, Q61E, L63P, H69K, L89M, I93L | CRF01_AE |
| | ND27 | ND27 | AB519600 | None | | | | G16E, E35D, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | ND33 | ND33 | AB519602 | None | | | | T12I, G16E, E35D, M36I, N37D, R41K, L63C, H69K, L89M, I93L | CRF01_AE |
| | NB19 | NB19 | AB519612 | None | | | | E35D, M36I, R41K, H69K, V82I, L89M, I93L | CRF01_AE |
| | NB29 | NB29 | AB519615 | None | | | | G16E, E35D, M36I, N37K, P39S, R41K, R57K, L63C, H69K, L89M, I93L | CRF01_AE |
| | NB41 | NB41 | AB519618 | None | | | | G16A, E35D, M36I, R41K, H69K, V82I, L89M, I93L | CRF01_AE |
| | NB50 | NB50 | AB519619 | None | | | | G16E, E35D, M36I, P39T, R41K, H69K, L89M, I93L | CRF01_AE |
| | NB53 | NB53 | AB519621 | None | | | | I15V, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | AH20 | AH20 | AB519623 | None | | | | K20R, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| Selimova (2010) | 40MOSR | 40MOSR | HM345569 | None | | | | E35ED, M36I, R41K, L63T, H69K, L89M, I93L | CRF01_AE |
| Zhang (2010) | 06112 | CNsd06112 | GQ443552 | None | | | | I13V, K20R, M36I, R41K, L63LP, H69K, K70R, V82I, L89M, I93L | CRF01_AE |
| | 0518 | CNsd0518 | GQ443554 | None | | | | E35D, M36I, R41K, H69K, T74S, L89M, I93L | CRF01_AE |
| | 06113 | CNsd06113 | GQ443588 | None | | | | I13V, K20R, M36I, R41K, L63P, H69K, K70R, L89M, I93L | CRF01_AE |
| Zolfo (2010) | A14013 | A 14013 M30 | HM565665 | None | | | | T12A, K20R, M36I, R41K, D60E, L63T, I64L, H69K, L89M, I93L | CRF01_AE |
| | A14064 | A 14064 M12 | HM565677 | None | | | | M36I, R41K, D60E, H69K, L89M, I93L | CRF01_AE |
| | A15720 | A 15720 M6 | HM565680 | None | | | | I15V, G16A, K20KR, E35ED, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | A14608 | A 14608 M12 | HM565686 | None | | | | Q7R, G16E, K20R, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | A13524 | A 13524 M12 | HM565698 | None | | | | K14R, K20R, E35D, M36I, N37D, R41K, L63P, H69K, K70KR, L89M, I93L, G94GDNS | CRF01_AE |
| | | A 13524 M24 | HM565631 | None | | | | K14R, K20R, E35D, M36I, N37D, R41K, K43KR, L63PS, H69K, K70KR, L89M, I93L | CRF01_AE |
| | A13822 | A 13822 RS | HM565733 | None | | | | I15V, E35D, M36I, R41K, H69K, V82VI, L89M, I93L | CRF01_AE |
| | | A 13822 M24 | HM565636 | None | | | | I15V, E35D, M36I, R41K, H69K, V82VI, L89M, I93L | CRF01_AE |
| Aghokeng (2011) | SK7004-PI | SK7004-PI | HQ864344 | None | | | | I13V, K14KR, E35D, M36I, R41K, D60E, H69K, I72V, L89M, I93L | CRF01_AE |
| Avi (2011) | 086u | 086u | GQ926649 | None | | | | L10I, I13V, K14R, E35D, M36I, R41K, D60E, L63T, I64L, H69K, L89M, I93L | CRF01_AE |
| Bontell (2011) | Pat062 | 08.VL731Hs | HQ852854 | None | | | | I13V, K20R, M36I, N37D, R41K, L63H, H69K, K70R, L89M, I93L | CRF01_AE |
| | Pat061 | 08.VL732Hi | HQ852855 | None | | | | I13IV, K20R, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | Pat060 | 08.VL733Hs | HQ852856 | None | | | | M36I, N37D, R41K, L63P, H69K, L89M, I93L | CRF01_AE |
| | Pat055 | 08.VL746Hi | HQ852861 | None | | | | K20R, M36I, N37D, R41K, H69K, L89M, I93L | CRF01_AE |
| | Pat030 | 09.VL840Yi | HQ852886 | None | | | | G16E, K20R, E35D, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | Pat022 | 09.VL954Hs | HQ852894 | None | | | | I15V, E35D, M36I, R41K, L63P, H69K, L89M, I93L | CRF01_AE |
| | Pat008 | 09.VL977Ui | HQ852908 | None | | | | K20R, M36I, N37ND, R41K, H69K, L89M, I93L | CRF01_AE |
| | Pat005 | 09.VL983Us | HQ852911 | None | | | | G16E, M36I, R41K, L63T, H69K, L89M, I93L | CRF01_AE |
| | Pat003 | 09.VL985Ui | HQ852913 | None | | | | I15V, G16E, E35D, M36I, R41K, L63C, H69K, T74S, L89M, I93L | CRF01_AE |
| Dean (2011) | IVVI0053 | IVVI0053 | JQ312333 | None | | | | E35D, M36I, R41K, Y59F, L63P, H69K, L89M, I93L | CRF01_AE |
| | IVVI0121 | IVVI0121 | JQ312343 | None | | | | G16E, L33LV, E35D, M36I, G40GE, R41K, R57K, D60E, Q61E, H69K, L89M, I93L | CRF01_AE |
| | IVVI0145 | IVVI0145 | JQ312348 | None | | | | L10LI, I13IV, K14R, E35D, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | IVVI0159 | IVVI0159 | JQ312351 | None | | | | I13V, G16E, K20R, M36I, N37D, R41K, L63PS, H69K, L89LM, I93L | CRF01_AE |
| | IVVI0175 | IVVI0175 | JQ312353 | None | | | | M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | IVVI0189 | IVVI0189 | JQ312357 | None | | | | G16E, E35D, M36I, R41K, R57K, D60E, Q61E, H69K, L89M, I93L | CRF01_AE |
| | IVVI0190 | IVVI0190 | JQ312358 | None | | | | K14R, I15V, G16E, E35D, M36I, R41K, R57K, H69K, I72IV, L89M, I93L | CRF01_AE |
| | IVVI0198 | IVVI0198 | JQ312360 | None | | | | K14R, I15V, G16AE, E35D, M36I, R41K, R57K, H69K, I72IV, L89M, I93L | CRF01_AE |
| | IVVI0199 | IVVI0199 | JQ312361 | None | | | | T4TI, L5LF, E35D, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | IVVI0348 | IVVI0348 | JQ312368 | None | | | | E35D, M36I, R41K, Q61QE, L63PS, H69K, L89M, I93L | CRF01_AE |
| | IVVI1970 | IVVI1970 | JQ312377 | None | | | | E35D, M36I, R41K, L63LP, H69K, L89M, I93L | CRF01_AE |
| | IVVI2035 | IVVI2035 | JQ312384 | None | | | | M36I, R41K, L63P, H69K, L89LM, I93L | CRF01_AE |
| | IVVI3728 | IVVI3728 | JQ312392 | None | | | | I13IV, G16E, K20R, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | IVVI5455 | IVVI5455 | JQ312398 | None | | | K43KT | I15V, G16E, E35D, M36I, R41K, L63C, H69K, L89M, I93L | CRF01_AE |
| | IVVI5543 | IVVI5543 | JQ312399 | None | | | | I15IV, G16E, K20R, E35D, M36I, R41K, L63C, H69K, L89M, I93L | CRF01_AE |
| | IVVI5575 | IVVI5575 | JQ312400 | None | | | | G16E, E35D, M36I, R41K, L63C, H69K, L89LM, I93L | CRF01_AE |
| | IVVI7005 | IVVI7005 | JQ312401 | None | | | | G16E, E35D, M36I, R41K, L63P, H69K, K70R, L89M, I93L | CRF01_AE |
| | IVVI7239 | IVVI7239 | JQ312412 | None | | | | G16E, E35D, M36I, R41K, L63C, H69K, L89M, I93L | CRF01_AE |
| | IVVI7272 | IVVI7272 | JQ312414 | None | | | | G16E, E35D, M36I, R41K, L63C, H69K, L89M, I93L | CRF01_AE |
| | IVVI7292 | IVVI7292 | JQ312416 | None | | | | G16E, K20R, E35D, M36I, R41K, K45KR, L63C, H69K, L89LM, I93L | CRF01_AE |
| | IVVI7390 | IVVI7390 | JQ312419 | None | | | | T12TA, I15IV, G16E, E35N, M36I, R41K, R57K, L63C, H69K, I93L | CRF01_AE |
| | IVVI7396 | IVVI7396 | JQ312421 | None | | | | L10V, K14R, G16E, M36I, N37D, R41K, L63T, H69K, L89M, I93L | CRF01_AE |
| Hamers (2011) | CP076301574 | CP076301574 | HQ993614 | None | | | | I3L, L10I, I13V, G16E, E35D, M36I, R41K, I62V, L63V, G68E, H69K, T74A, L89M, T91V, I93L | CRF01_AE |
| Kao (2011) | Pat226 | 27956 | HQ657814 | None | | | | I15V, G16E, L19M, K20R, E35D, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | Pat183 | 35886 | HQ657857 | None | | | | I13V, I15V, E35D, M36I, R41K, H69K, K70R, L89M, I93L | CRF01_AE |
| | Pat181 | 35912 | HQ657859 | None | | | | G16GE, E35ED, M36I, R41K, Q61QE, L63LP, H69K, K70KR, L89M, I93L | CRF01_AE |
| | Pat159 | 36083 | HQ657881 | None | | | | I13V, K20R, M36I, R41K, L63P, H69K, L89M, I93L | CRF01_AE |
| | Pat053 | 36599 | HQ657987 | None | | | | I13V, K20R, M36I, R41K, L63P, H69K, L89M, I93L | CRF01_AE |
| | Pat050 | 36627 | HQ657990 | None | | | | L10V, I13V, G16E, M36I, R41K, K45R, L63H, H69K, K70R, L89M, I93L | CRF01_AE |
| Lazaro (2011) | AG-M2 | AG-M2 | HQ542613 | None | | | V11I | I13V, G16E, K20I, E35D, M36L, R41K, Q61E, H69K, K70R, L89M, I93L | CRF01_AE |
| | VT-M9 | VT-M9 | HQ542638 | None | | | | I13V, E35D, M36IT, R41K, L63P, H69K, K70R, A71V, L89M, I93L | CRF01_AE |
| | AG-M15 | AG-M15 | HQ542625 | None | | | | I13V, K20R, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | AG-M23 | AG-M23 | HQ542631 | None | | | | G16E, K20R, E35D, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | AG-M25 | AG-M25 | HQ542633 | None | | | | I13V, K20R, M36I, R41K, K45KR, H69K, K70R, V82I, L89M, I93L | CRF01_AE |
| | VT-M2 | VT-M2 | HQ542634 | None | | | L33F | G16E, K20R, M36I, R41K, L63C, H69K, L89M, I93L | CRF01_AE |
| | VT-M8 | VT-M8 | HQ542637 | None | | | | I15V, G16E, K20R, E35D, M36I, R41K, L63C, H69K, I93L | CRF01_AE |
| | VT-M19 | VT-M19 | HQ542647 | None | | | | G16E, E35D, M36I, R41K, L63C, H69K, V82VI, L89M, I93L | CRF01_AE |
| | VT-M24 | VT-M24 | HQ542652 | None | | | | G16E, E35D, M36I, R41K, L63C, H69K, L89M, I93L | CRF01_AE |
| | DN-M9 | DN-M9 | HQ542660 | None | | | | T12TA, I15V, G16E, E35D, M36IT, R41K, D60E, L63C, E65EQ, H69K, L89M, I93L | CRF01_AE |
| | DN-M11 | DN-M11 | HQ542662 | None | | | | I13V, G16A, M36I, N37D, R41K, P44PS, H69K, K70R, L89M, I93L | CRF01_AE |
| | DN-M13 | DN-M13 | HQ542664 | None | | | | I13V, K20R, M36I, R41K, H69K, V82I, L89M, I93L | CRF01_AE |
| | DN-M15 | DN-M15 | HQ542665 | None | | | | G16E, E35D, M36I, K45R, L63P, H69K, L89M, I93L | CRF01_AE |
| | DN-M16 | DN-M16 | HQ542666 | None | | | | G16E, K20KR, E35ED, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | DN-M18 | DN-M18 | HQ542667 | None | | | | T4N, L10LI, I13V, K14R, G16GE, M36I, R41K, D60E, Q61QE, L63P, H69K, L89M, I93L | CRF01_AE |
| | TG-M8 | TG-M8 | HQ542678 | None | | | | G16A, K20R, E35D, M36I, N37DE, L63C, H69K, L89LM, I93L | CRF01_AE |
| | TG-M16 | TG-M16 | HQ542684 | None | | | L33F | I13V, G16A, M36I, N37D, R41K, L63F, H69K, L89M, I93L, L97P | CRF01_AE |
| | TG-M23 | TG-M23 | HQ542689 | None | | | | I15V, K20R, E35D, M36I, N37D, R41K, H69K, V82VI, L89M, I93L | CRF01_AE |
| | DT-M9 | DT-M9 | HQ542695 | None | | | | I13IV, I15V, E35D, M36I, R41K, R57K, L63P, H69K, L89M, T91TN, I93L | CRF01_AE |
| | DT-M10 | DT-M10 | HQ542696 | None | | | | I13V, I15V, E35D, M36I, R41K, R57K, L63V, I64M, H69K, L89M, I93L | CRF01_AE |
| | DT-M15 | DT-M15 | HQ542700 | None | | | | G16E, E35D, M36I, R41K, K43R, L63C, H69K, L89M, I93L | CRF01_AE |
| | DT-M17 | DT-M17 | HQ542702 | None | | | | G16E, E35D, M36I, R41K, L63C, H69K, L89M, I93L | CRF01_AE |
| | DT-M18 | DT-M18 | HQ542703 | None | | | | G16E, E35D, M36I, R41K, H69K, V82I, L89M, I93L | CRF01_AE |
| | DT-M19 | DT-M19 | HQ542704 | None | | | | I15IV, E35D, M36I, R41K, K43KN, R57K, H69K, L89M, I93L | CRF01_AE |
| Ng (2011) | FREE002 | FREE002 | HQ539007 | None | | | | I13V, K20R, M36I, N37D, Q61E, L63P, H69K, L89M, I93L | CRF01_AE |
| | FREE024 | FREE024 | HQ539016 | None | | | | I13V, K20R, M36I, R41K, H69K, V82I, L89M, I93L | CRF01_AE |
| | FREE061 | FREE061 | HQ539028 | None | | | | I13V, I15V, K20R, M36I, R41K, L63P, H69K, L89M, I93L | CRF01_AE |
| | FREE065 | FREE065 | HQ539030 | None | | | L33F | I13V, G16E, N37S, P39S, L63S, H69K, K70R, L89M, I93L | CRF01_AE |
| | HM003 | HM003 | HQ539038 | None | | | | I13V, K20R, E35D, M36I, R41K, L63P, H69K, L89M, Q92H, I93L | CRF01_AE |
| | HM017 | HM017 | HQ539052 | None | | | | G16E, K20R, E35D, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | HM031 | HM031 | HQ539065 | None | | | | D25N, E34K, E35D, M36I, R41K, K45R, H69R, L89M, I93L | CRF01_AE |
| | HM032 | HM032 | HQ539066 | None | | | | G16E, E35D, M36I, R41K, L63C, H69K, L89M, I93L | CRF01_AE |
| | HM038 | HM038 | HQ539071 | None | | | | I13V, G16E, K20R, E35D, M36I, R41K, L63P, H69K, L89M, I93L | CRF01_AE |
| | HM041 | HM041 | HQ539074 | None | | | | G16A, E35D, M36I, N37D, R41K, R57K, H69K, K70R, L89M, I93L | CRF01_AE |
| | HM051 | HM051 | HQ539084 | None | | | | I13V, G16E, K20R, E35D, M36I, P39S, R41K, K45R, L63P, H69K, L89M, I93L | CRF01_AE |
| | HM069 | HM069 | HQ539098 | None | | | | E35D, M36I, R41K, L63T, H69K, L89M, I93L | CRF01_AE |
| | HM089 | HM089 | HQ539117 | None | | | | T12P, I13V, K20R, M36I, R41K, L63P, H69K, L89M, I93L | CRF01_AE |
| | HM102 | HM102 | HQ539128 | None | | | | K20R, E35D, M36I, R41K, L63P, H69K, L89M, I93L | CRF01_AE |
| | HM119 | HM119 | HQ539144 | None | | | | I13V, I15V, G16E, K20R, E35D, M36I, R57K, D60E, L63S, H69K, L89M, I93L | CRF01_AE |
| | HM128 | HM128 | HQ539153 | None | | | | G16E, K20R, M36I, R41K, H69K, K70R, L89M, I93L | CRF01_AE |
| | HM155 | HM155 | HQ539180 | None | | | | I13V, M36I, D60E, H69K, L89M, I93L | CRF01_AE |
| | MOVL224 | MOVL224 | HQ539203 | None | | | | I13V, I15V, G16E, K20R, E35D, M36I, R57K, D60E, L63S, H69K, L89M, I93L | CRF01_AE |
| Ngo-Giang-Huong (2011) | PHPT0279 | PHPT0279PR-RT | HQ996514 | None | | | | G16A, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | PHPT4352 | PHPT4352PR-RT | HQ996515 | None | | | | T12A, K14R, I15IV, G16GA, Q18QL, M36D, R41K, H69K, V82I, L89M, I93L | CRF01_AE |
| | PHPT1796 | PHPT1796PR-RT | HQ996520 | None | | | | K20R, E35D, M36I, R41K, L63P, H69K, L89M, I93L | CRF01_AE |
| Su (2011) | LZ2006 | LZ2006 | HQ588182 | None | | | | E35D, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | LZ2055 | LZ2055 | HQ588197 | None | | | | I13V, M36I, R41K, H69K, K70R, T74S, L89M, I93L, G94A | CRF01_AE |
| | LZ2082 | LZ2082 | HQ588202 | None | | | | I13V, M36I, R57K, L63D, H69R, I72T, L89M, I93L | CRF01_AE |
| | LZ2093 | LZ2093 | HQ588204 | None | | | | K20R, E35D, M36I, N37D, R41K, L63P, H69K, L89M, I93L | CRF01_AE |
| | LZ2101 | LZ2101 | HQ588207 | None | | | | I13V, K20R, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | LZ2108 | LZ2108 | HQ588209 | None | | | | G16A, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | LZ2110 | LZ2110 | HQ588210 | None | | | | I13V, K20R, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | LZ2112 | LZ2112 | HQ588212 | None | | | | E35D, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | LZ2121 | LZ2121 | HQ588215 | None | | | | E35D, M36I, R41K, L63P, H69K, L89M, I93L | CRF01_AE |
| | LZ2123 | LZ2123 | HQ588216 | None | | | | T12A, I13V, M36I, R41K, H69R, V77I, L89M, I93L | CRF01_AE |
| | LZ2130 | LZ2130 | HQ588217 | None | | | | T12A, I13V, M36I, R41K, H69R, V77I, L89M, I93L | CRF01_AE |
| | LZ2131 | LZ2131 | HQ588218 | None | | | | E35D, M36I, R41K, Q61E, H69K, L89M, I93L | CRF01_AE |
| | LZ2138 | LZ2138 | HQ588220 | None | | | | E35A, M36I, R41K, V56A, R57K, L63P, H69K, G78D, T80R, L89M, I93L | CRF01_AE |
| | LZ2140 | LZ2140 | HQ588221 | None | | | | E35D, M36I, R41K, L63P, H69K, L89M, I93L | CRF01_AE |
| | LZ2148 | LZ2148 | HQ588224 | None | | | | E35D, M36I, R41K, L63P, I64M, H69K, L89M, I93L | CRF01_AE |
| | LZ2151 | LZ2151 | HQ588225 | None | | | | L10V, I15V, E35D, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | LZ2161 | LZ2161 | HQ588227 | None | | | | E35D, M36I, R41K, I64V, H69K, L89M, I93L | CRF01_AE |
| | LZ2162 | LZ2162 | HQ588228 | None | | | | E35D, M36I, R41K, Q61E, H69K, L89M, I93L | CRF01_AE |
| | LZ2168 | LZ2168 | HQ588231 | None | | | | I13V, G16E, K20R, E35D, M36I, R41K, L63V, H69K, I72V, L89M, I93L | CRF01_AE |
| | GXNN5851 | GXNN5851 | HQ588234 | None | | | | I13V, M36I, R41K, H69R, L89M, I93L | CRF01_AE |
| | GXNN5927 | GXNN5927 | HQ588235 | None | | | | I13V, E35D, M36I, R41K, H69R, L89M, I93L | CRF01_AE |
| | GXNN6093 | GXNN6093 | HQ588236 | None | | | | E35D, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | GXBY5817 | GXBY5817 | HQ588239 | None | | | | I13V, E35D, M36I, R41K, H69R, I72V, L89M, I93L | CRF01_AE |
| | GXHX1605 | GXHX1605 | HQ588245 | None | | | | I13V, K20R, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | GXHX6917 | GXHX6917 | HQ588254 | None | | | | I13V, G16E, E35D, M36I, R41K, L63P, H69K, L89M, I93L | CRF01_AE |
| | GXNN1819 | GXNN1819 | HQ588260 | None | | | | I13V, G16E, E35D, M36I, R41K, L63P, H69K, L89M, I93L | CRF01_AE |
| | GXBY2058 | GXBY2058 | HQ588261 | None | | | | M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | GXHX2023 | GXHX2023 | HQ588271 | None | | | | E35D, M36I, N37D, R41K, H69R, L89M, I93L | CRF01_AE |
| | GXBY7291 | GXBY7291 | HQ588272 | None | | | | K20R, M36I, R41K, L63P, H69K, K70R, L89M, I93L | CRF01_AE |
| | GXNN7478 | GXNN7478 | HQ588273 | None | | | | G16E, E35D, M36I, R41K, L63T, H69K, K70R, I72T, L89M, I93L | CRF01_AE |
| | GXNN0143 | GXNN0143 | HQ588301 | None | | | | T12P, G16E, E35D, M36I, R41K, L63S, H69K, L89M, I93L | CRF01_AE |
| | GXNN7232 | GXNN7232 | HQ588303 | None | | | | M36I, R41K, H69K, V82I, L89M, I93L | CRF01_AE |
| Telan (2011) | 09MM_09-8567 | 09MM_09-8567 | AB587097 | None | | | | K20R, M36I, R41K, K45R, H69K, L89M, I93L | CRF01_AE |
| | 09MM_09-1840 | 09MM_09-1840 | AB587100 | None | | | | I13V, K20R, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | 08R_01-359 | 08R_01-359 | AB587102 | None | | | | K20R, M36I, R41K, H69K, I72M, L89M, I93L | CRF01_AE |
| Ye (2011) | BJ07330 | BJ07330 | JF906610 | None | | | | G16E, E35D, M36I, R41K, H69K, K70R, L89M, I93L | CRF01_AE |
| | BJ07371 | BJ07371 | JF906624 | None | | | | I13V, L19M, E35D, M36I, R41K, H69K, V82I, L89M, I93L | CRF01_AE |
| | BJ07402 | BJ07402 | JF906636 | None | | | | L19M, E35D, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | BJ07418 | BJ07418 | JF906640 | None | | | | E35D, M36I, R41K, H69K, K70KR, A71AT, L89M, I93L | CRF01_AE |
| | BJ07443 | BJ07443 | JF906646 | None | | | | E35D, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | BJ07528 | BJ07528 | JF906661 | None | | | | E35D, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | BJ07542 | BJ07542 | JF906664 | None | | | | K20R, E35D, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | BJ07562 | BJ07562 | JF906675 | None | | | | K20R, E35D, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | BJ07618 | BJ07618 | JF906686 | None | | | | K14R, E35D, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| Zeng (2011) | K1 | K1 | JF505552 | None | | | | L19M, E35D, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | K43 | K43 | JF505553 | None | | | | L19M, K20R, E35D, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | K4 | K4 | JF505560 | None | | | | I13V, E35D, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | K27 | K27 | JF505563 | None | | | | E35D, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | K55 | K55 | JF505565 | None | | | | I13V, I15V, E35D, M36I, R41K, H69K, V82I, L89M, I93L | CRF01_AE |
| | G1 | G1 | JF505568 | None | | | | I13V, E35D, M36I, R41K, H69K, T74S, L89M, I93L | CRF01_AE |
| | G3 | G3 | JF505570 | None | | | | I15V, E35D, M36I, R41K, K45R, H69K, L89M, I93L | CRF01_AE |
| An (2012) | 09LNA008 | 09LNA008 | JX960604 | None | | | | K20R, E35D, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | 09LNA011 | 09LNA011 | JX960605 | None | | | | K20R, E35D, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | 08LNA003 | 08LNA003 | JX960606 | None | | | | K20R, E35D, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | 09LNA340 | 09LNA340 | JX960607 | None | | | | K20R, E35D, M36I, R41K, L63I, H69K, K70Q, I72M, L89M, I93L | CRF01_AE |
| | 10LNA571 | 10LNA571 | JX960611 | None | | | | E35D, M36I, R41K, L63P, H69K, L89M, I93L | CRF01_AE |
| | 08LNA004 | 08LNA004 | JX960617 | None | | | | T12S, L19I, E35D, M36I, R41K, L63M, H69K, V82I, L89M, I93L | CRF01_AE |
| | 09LNA041 | 09LNA041 | JX960618 | None | | | | L19I, E35D, M36I, R41K, L63T, H69K, V82I, L89M, I93L | CRF01_AE |
| | 10LNA294 | 10LNA294 | JX960619 | None | | | | T12S, L19I, K20R, E35D, M36I, R41K, L63S, H69K, V82I, L89M, I93L | CRF01_AE |
| | 10LNA918 | 10LNA918 | JX960620 | None | | | | T12S, L19I, K20R, E35D, M36I, R41K, L63S, H69K, V82I, L89M, I93L | CRF01_AE |
| | 09LNA425 | 09LNA425 | JX960621 | None | | | | T12S, L19I, E35D, M36I, R41K, L63S, H69K, V82I, L89M, I93L | CRF01_AE |
| | 10LNA264 | 10LNA264 | JX960622 | None | | | | L19I, E35D, M36I, R41K, L63V, H69K, V82I, L89M, I93L | CRF01_AE |
| | 09LNA527 | 09LNA527 | JX960625 | None | | | | I13V, L19M, E35D, M36I, R41K, R57K, H69K, K70R, V82I, L89M, I93L | CRF01_AE |
| | 10LNA105 | 10LNA105 | JX960626 | None | | | | I13V, G16E, L19M, K20R, E35D, M36I, R41K, K45R, I62V, L63T, H69K, V82I, L89M, I93L | CRF01_AE |
| | 10LNA057 | 10LNA057 | JX960633 | None | | | | T12A, I15V, L19I, E35D, M36I, R41K, L63P, I64M, H69K, K70R, L89M, I93L | CRF01_AE |
| Chen (2012) | YN09DH0046 | YN09DH0046 | JQ658516 | None | | | | L10V, I13V, I15IM, E35D, M36I, N37D, R41K, R57K, H69K, L89M, I93L | CRF01_AE |
| | YN09DH0105 | YN09DH0105 | JQ658568 | None | | | | G16E, E35D, M36I, R41K, L63P, H69K, I93L | CRF01_AE |
| | YN09DH0106 | YN09DH0106 | JQ658569 | None | | | | K20R, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | YN09DH0123 | YN09DH0123 | JQ658583 | None | | | | E35D, M36I, R41K, L63P, H69K, L89M, I93L | CRF01_AE |
| | YN09DH0141 | YN09DH0141 | JQ658598 | None | | | | K20KR, E35D, M36I, R41K, R57K, H69K, L89M, I93L | CRF01_AE |
| | YN09DH0144 | YN09DH0144 | JQ658601 | None | | | | T12TA, G16E, E35D, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | YN09DH0157 | YN09DH0157 | JQ658614 | None | | | | I13V, K20R, M36I, R41K, L63P, H69K, L89M, I93L | CRF01_AE |
| | YN10DH0020 | YN10DH0020 | JQ658646 | None | | | | I13V, M36V, R41K, L63P, H69K, A71V, I72IV, I93L | CRF01_AE |
| | YN10DH0023 | YN10DH0023 | JQ658648 | None | | | | G16E, M36I, R41K, D60E, H69K, I72IV, L89M, I93L | CRF01_AE |
| | YN10DH0024 | YN10DH0024 | JQ658649 | None | | | L33F | I13V, M36I, P39Q, R41K, R57RK, L63P, H69K, L89M, I93L | CRF01_AE |
| | YN10DH0042 | YN10DH0042 | JQ658666 | None | | | | I15IV, E35D, M36I, R41K, L63LP, H69K, V82VI, L89M, I93L | CRF01_AE |
| | YN10DH0057 | YN10DH0057 | JQ658680 | None | | | | E35D, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | YN10DH0060 | YN10DH0060 | JQ658683 | None | | | | T12TA, D29DG, E35D, M36I, R41K, L63P, H69K, L89M, I93L | CRF01_AE |
| | YN10DH0063 | YN10DH0063 | JQ658686 | None | | | | G16E, E35D, M36I, R41K, R57K, H69K, L89M, I93L | CRF01_AE |
| | YN10DH0065 | YN10DH0065 | JQ658687 | None | | | | E35D, M36I, R41K, L63LP, H69K, L89M, I93L | CRF01_AE |
| | YN10DH0072 | YN10DH0072 | JQ658693 | None | | | | E35D, M36I, R41K, L63P, H69K, L89M, I93L | CRF01_AE |
| | YN10DH0073 | YN10DH0073 | JQ658694 | None | | | | I15IV, E35D, M36I, R41K, L63P, H69K, L89M, I93L | CRF01_AE |
| | YN10DH0088 | YN10DH0088 | JQ658709 | None | | | | G16E, E35D, M36I, R41K, L63P, H69K, K70R, I93L | CRF01_AE |
| | YN10DH0100 | YN10DH0100 | JQ658721 | None | | | | G16E, L19M, E35D, M36I, R41K, L63T, H69K, L89M, I93L | CRF01_AE |
| | YN10DH0119 | YN10DH0119 | JQ658739 | None | | | | G16E, E35N, M36I, R41K, G49E, G51E, V56I, E65K, H69K, L89M, I93L | CRF01_AE |
| | YN10DH0122 | YN10DH0122 | JQ658742 | None | | | | E35D, M36I, R41K, L63P, H69K, L89M, I93L | CRF01_AE |
| | YN10DH0126 | YN10DH0126 | JQ658746 | None | | | L89MV | T12A, E35D, M36I, R41K, L63P, H69K, I93L | CRF01_AE |
| | YN10DH0127 | YN10DH0127 | JQ658747 | None | | | | E35D, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | YN10DH0140 | YN10DH0140 | JQ658759 | None | | | | T12A, G16E, E35D, M36V, R41K, K45R, H69K, I72V, L89M, I93L | CRF01_AE |
| De Gascun (2012) | IRL12973 | IRL12973 | JN622225 | None | | | | V11VF, E35D, M36I, R41K, L63LP, H69K, L89M, I93L | CRF01_AE |
| | IRL27862 | IRL27862 | JN622229 | None | | | | I13V, K20R, M36I, N37S, R41RK, H69K, L89M, I93L | CRF01_AE |
| Hassan (2012) | RS09000868 | RS09000868 | HQ441613 | None | | | | L10V, I13V, G16E, E35ED, M36I, R41K, L63V, H69K, L89M, T91V, I93L | CRF01_AE |
| Karlsson (2012) | SE_101 | SE_101 | JQ698736 | None | | | | G16E, K20R, E35D, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | SE_161 | SE_161 | JQ698779 | None | | | | W6G, G16E, E35D, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | SE_294 | SE_294 | JQ698868 | None | | | | L5LF, G16A, E35D, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| Kijak (2012) | 05TH130087 | 05TH130087 | JN248339 | None | | | | L10V, T12I, I13V, G16E, E35D, M36I, R41K, L63N, H69K, L89M, I93L | CRF01_AE |
| | 05TH342968 | 05TH342968 | JN248342 | None | | | | T12A, E35D, M36I, R41K, L63P, H69K, L89M, I93L | CRF01_AE |
| | 04TH328531 | 04TH328531 | JN248324 | None | | | | G16E, K20R, E35D, M36I, R41K, L63S, H69K, L89M, I93L | CRF01_AE |
| | 04TH807015 | 04TH807015 | JN248334 | None | | | | K20R, E35D, M36I, R41K, L63P, H69K, L89M, I93L | CRF01_AE |
| | 04TH427990 | 04TH427990 | JN248327 | None | | | | I13V, G16E, K20R, E35D, M36I, R41K, H69K, K70R, L89M, I93L | CRF01_AE |
| | 04TH321566 | 04TH321566 | JN248322 | None | | | | I13V, K20R, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | 04TH704320 | 04TH704320 | JN248331 | None | | | | E35D, M36I, R41K, D60E, H69K, L89M, I93L | CRF01_AE |
| | 05TH327568 | 05TH327568 | JN248341 | None | | | | G16A, Q18H, E35D, M36I, R41K, L63P, H69K, L89M, I93L | CRF01_AE |
| Rolland (2012) | AA014a02L | AA014a02L | JX446859 | None | | | | I13V, E35D, M36I, R41K, L63P, H69K, L89M, I93L | CRF01_AE |
| | AA019a_WG2 | AA019a_WG2 | JX446920 | None | | | | K20R, E35D, M36I, R41K, L63P, H69K, I72V, L89M, I93L | CRF01_AE |
| | AA027a_wg2a | AA027a_wg2a | JX447026 | None | | | | K14R, E35D, M36I, R41K, L63P, H69K, L89M, I93L | CRF01_AE |
| | AA041a01L | AA041a01L | JX447167 | None | | | | I13V, M36I, R41K, L63C, H69K, T74A, L89M, I93L | CRF01_AE |
| | AA050a_WG2 | AA050a_WG2 | JX447285 | None | | | | I13V, G16A, E35D, M36I, R41K, D60E, Q61E, H69K, L89M, I93L | CRF01_AE |
| | AA054a04 | AA054a04 | JX447307 | None | | | | K20R, E35D, M36I, N37D, R41K, D60E, H69K, L89M, I93L | CRF01_AE |
| | AA059a_WG3 | AA059a_WG3 | JX447355 | None | | | | E35D, M36I, R41K, L63P, H69K, L89M, I93L | CRF01_AE |
| | AA070a_LH07 | AA070a_LH07 | JX447491 | None | | | | T12V, G16E, E35D, M36I, R41K, R57K, H69K, L89M, I93L | CRF01_AE |
| | AA095a_WG22 | AA095a_WG22 | JX447831 | None | | | | I15V, E35D, M36I, R41K, L63P, H69K, K70R, L89M, I93L | CRF01_AE |
| | AA096a_WG8 | AA096a_WG8 | JX447842 | None | | | | I15V, E35D, M36I, R41K, L63P, H69K, K70R, L89M, I93L | CRF01_AE |
| | AA098a02L | AA098a02L | JX447867 | None | | | | L10V, I15V, G16E, K20R, E35D, M36I, R41K, G68E, H69K, L89M, I93L | CRF01_AE |
| | AA102a_LH7 | AA102a_LH7 | JX447940 | None | | | | G16A, E35D, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | AA103a07L | AA103a07L | JX447952 | None | | | | I13M, K20R, E35D, M36I, R41K, L63P, H69K, L89M, I93L | CRF01_AE |
| | AA104a_LH21 | AA104a_LH21 | JX447973 | None | | | L33F | I3L, L10I, I13V, M36I, R41K, H69K, K70R, L89M, I93L, G94D | CRF01_AE |
| | AA112a05L | AA112a05L | JX448068 | None | | | | I13V, K14R, E35D, M36I, R41K, L63P, H69K, L89M, I93L | CRF01_AE |
| | AA119a_02L | AA119a_02L | JX448174 | None | | | | E35D, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | AA126a08L | AA126a08L | JX448268 | None | | | | I15V, G16E, E35D, M36I, R41K, D60E, H69K, L89M, I93L | CRF01_AE |
| | AA131a01L | AA131a01L | JX448311 | None | | | | K20R, E35D, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| Sigaloff (2012) | KEKSN423 | KEKSN423 | JN628481 | None | | | | T12S, I15V, L19I, E35D, M36I, R41K, R57K, L63P, C67E, H69K, L89M, I93L | CRF01_AE |
| Telan (2012) | 801359 | 801359 | AB747377 | None | | | | K20R, M36I, R41K, H69K, I72M, L89M, I93L | CRF01_AE |
| | 9098567 | 9098567 | AB747381 | None | | | | K20R, M36I, R41K, K45R, H69K, L89M, I93L | CRF01_AE |
| | 11023131 | 11023131 | AB747439 | None | | | | K20R, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | 110318367 | 110318367 | AB747444 | None | | | | K20R, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | 110318565 | 110318565 | AB747445 | None | | | | K20R, M36I, R41K, L63P, H69K, L89M, I93L | CRF01_AE |
| | 110318824 | 110318824 | AB747447 | None | | | | K20R, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | 11084876 | 11084876 | AB747448 | None | | | | K20R, M36I, N37D, R41K, H69K, L89M, I93L | CRF01_AE |
| | 10031110 | 10031110 | AB747449 | None | | | | I13V, I15V, L19M, K20R, M36I, R41K, L63P, H69K, L89M, I93L | CRF01_AE |
| | 11031525 | 11031525 | AB747452 | None | | | | K20R, M36I, R41K, H69K, K70R, L89M, I93L | CRF01_AE |
| | 11052748 | 11052748 | AB747453 | None | | | | K20R, M36I, N37D, L63P, H69K, L89M, I93L | CRF01_AE |
| | 11052838 | 11052838 | AB747454 | None | | | | T12I, I13V, G16E, K20R, M36I, R41K, L63V, H69K, L89M, I93L | CRF01_AE |
| | 11052918 | 11052918 | AB747455 | None | | | | K20R, E35D, M36I, R41K, H69K, K70R, L89M, I93L | CRF01_AE |
| | 11063580 | 11063580 | AB747456 | None | | | | K20R, M36I, R41K, H69K, K70R, L89M, I93L | CRF01_AE |
| | 11063626 | 11063626 | AB747457 | None | | | | I13V, I15V, L19M, K20R, M36I, H69K, L89M, I93L | CRF01_AE |
| | 11063809 | 11063809 | AB747459 | None | | | | I13V, I15V, L19M, K20R, M36I, R41K, L63P, H69K, L89M, I93L | CRF01_AE |
| | 11084622 | 11084622 | AB747460 | None | | | | K20R, M36I, R41K, H69K, K70R, V77I, L89M, I93L | CRF01_AE |
| | 11084717 | 11084717 | AB747461 | None | | | | I13V, K14R, K20R, M36I, R41K, H69K, K70R, L89M, I93L | CRF01_AE |
| | 11084721 | 11084721 | AB747462 | None | | | | K20R, M36I, R41K, H69K, I93L | CRF01_AE |
| | 11117952 | 11117952 | AB747464 | None | | | L10F | K20R, E35D, M36I, R41K, Q61D, L63S, C67S, H69K, I72T, L89M, I93L | CRF01_AE |
| | 1101275 | 1101275 | AB747467 | None | | | | K20R, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | 11042829 | 11042829 | AB747470 | None | | | | K20R, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | 11042838 | 11042838 | AB747471 | None | | | | T12I, I13V, G16E, K20R, M36I, R41K, L63V, H69K, L89M, I93L | CRF01_AE |
| | 11042857 | 11042857 | AB747472 | None | | | | K20R, E35D, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | 11053016 | 11053016 | AB747474 | None | | | | I13V, K20R, M36I, R41K, I64L, H69K, L89M, I93L | CRF01_AE |
| | 11063364 | 11063364 | AB747477 | None | | | | K20R, E35D, M36I, R41K, L63P, H69K, K70R, L89M, I93L | CRF01_AE |
| | 11063901 | 11063901 | AB747479 | None | | | | K20R, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | 11063966 | 11063966 | AB747481 | None | | | | I13V, I15V, K20R, M36I, P39S, R41K, H69K, K70R, L89M, I93L | CRF01_AE |
| | 11084994 | 11084994 | AB747488 | None | | | | K14R, G16E, K20R, M36I, R41K, H69K, K70R, L89M, I93L | CRF01_AE |
| | 11095719 | 11095719 | AB747491 | None | | | | K20R, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | 11096245 | 11096245 | AB747493 | None | | | | K20R, M36I, P39S, R41K, K45R, L63S, H69K, L89M, I93L | CRF01_AE |
| | 11106566 | 11106566 | AB747495 | None | | | | K20R, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | 11107161 | 11107161 | AB747496 | None | | | | K20R, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | 11117092 | 11117092 | AB747497 | None | | | | K20R, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | 11117327 | 11117327 | AB747498 | None | | | | K20R, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | 11117852 | 11117852 | AB747500 | None | | | | K20R, M36I, R41K, L63P, H69K, L89I, I93L | CRF01_AE |
| | 11118565 | 11118565 | AB747501 | None | | | | K20R, M36I, R41K, H69K, I72V, L89M, I93L | CRF01_AE |
| | 12031759 | 12031759 | AB747505 | None | | | | K20R, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | 12031765 | 12031765 | AB747507 | None | | | | K20R, M36I, R41K, K45R, H69K, L89M, I93L | CRF01_AE |
| | 12031880 | 12031880 | AB747509 | None | | | | K20R, M36I, R41K, H69K, K70R, I72V, L89M, I93L | CRF01_AE |
| | 12031810 | 12031810 | AB747510 | None | | | | K20R, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | 12031859 | 12031859 | AB747511 | None | | | | K20R, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | 12031860 | 12031860 | AB747512 | None | | | | K20R, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | 12031877 | 12031877 | AB747513 | None | | | | K20R, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | 12031879 | 12031879 | AB747514 | None | | | | K20R, M36I, H69K, L89M, I93L | CRF01_AE |
| | 12031900 | 12031900 | AB747517 | None | | | | K20R, M36I, R41K, H69K, I93L | CRF01_AE |
| | 12031911 | 12031911 | AB747518 | None | | | | K20R, M36I, R41K, L63I, H69K, L89M, I93L | CRF01_AE |
| | 12031934 | 12031934 | AB747521 | None | | | | K20R, M36I, N37D, K45R, H69K, L89M, I93L | CRF01_AE |
| | 12031998 | 12031998 | AB747535 | None | | | | K20R, M36I, R41K, H69K, K70R, L89M, I93L | CRF01_AE |
| | 12032026 | 12032026 | AB747537 | None | | | | K20R, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | 12032037 | 12032037 | AB747539 | None | | | | K20R, M36I, R41K, K45R, H69K, L89M, I93L | CRF01_AE |
| | 12032076 | 12032076 | AB747540 | None | | | | G16E, K20R, M36I, R41K, L63I, H69K, K70R, L89M, I93L | CRF01_AE |
| | 12032090 | 12032090 | AB747541 | None | | | | K20R, E35D, M36I, H69K, L89M, I93L | CRF01_AE |
| | 12032095 | 12032095 | AB747542 | None | | | | K20R, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | 12032291 | 12032291 | AB747544 | None | | | | G16E, K20R, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | 12032299 | 12032299 | AB747545 | None | | | | K20R, M36I, R41K, H69K, V82I, L89M, I93L | CRF01_AE |
| | 12032103 | 12032103 | AB747546 | None | | | | K20R, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | 12032110 | 12032110 | AB747547 | None | | | | K20R, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | 12032290 | 12032290 | AB747548 | None | | | | G16E, K20R, M36I, R41K, H69K, K70R, L89M, I93L | CRF01_AE |
| | 12037182 | 12037182 | AB747549 | None | | | | G16A, K20R, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| Tran (2012) | HPA073 | HPA073 | AB690883 | None | | | | I15IV, E35D, M36I, R41K, K45KR, L63LP, H69K, L89M, I93L | CRF01_AE |
| | HPA107 | HPA107 | AB690887 | None | | | | K20R, E35D, M36I, R41K, L63P, H69K, L89M, I93L | CRF01_AE |
| | HPA149 | HPA149 | AB690890 | None | | | | I13V, G16E, K20R, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | HPA154 | HPA154 | AB690892 | None | | | | I13IV, K20R, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | HPA188 | HPA188 | AB690900 | None | | | | I13V, E35D, M36I, R41K, H69K, A71V, L89M, I93L | CRF01_AE |
| | HPA193 | HPA193 | AB690903 | None | | | | I13V, E34D, M36D, R41K, L63P, H69K, L89M, I93L | CRF01_AE |
| | HPA219 | HPA219 | AB690911 | None | | | | G16AE, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | HPA222 | HPA222 | AB690912 | None | | | | I15V, G16A, M36I, R41K, L63LP, H69K, L89IM, I93L | CRF01_AE |
| | HPA239 | HPA239 | AB690914 | None | | | | I15V, G16E, E35D, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | HPA246 | HPA246 | AB690916 | None | | | | I15V, E35D, M36I, N37D, R41K, L63P, H69K, L89M, I93L | CRF01_AE |
| | HPA259 | HPA259 | AB690918 | None | | | | K20R, E35D, M36I, R41K, H69K, V82I, L89M, I93L | CRF01_AE |
| | HPA261 | HPA261 | AB690919 | None | | | | I15IV, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | HPA267 | HPA267 | AB690922 | None | | | | E35D, M36I, R41K, D60E, H69K, L89M, I93L | CRF01_AE |
| | HPA294 | HPA294 | AB690925 | None | | | | K14KR, L19LM, K20R, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | HPC043 | HPC043 | AB690952 | None | | | | G16A, K20R, E35D, M36I, N37D, R41K, H69K, K70R, L89M, I93L | CRF01_AE |
| | HPC053 | HPC053 | AB690957 | None | | | | M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | HPC056 | HPC056 | AB690959 | None | | | | I13IV, G16A, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | HPV2_124 | HPV2_124 | AB690969 | None | | | | T12P, G16E, E35D, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | HPV2_184 | HPV2_184 | AB690973 | None | | | | I15V, G16A, K20R, E35D, M36I, N37D, R41K, H69K, K70R, L89M, I93L | CRF01_AE |
| | HPV2_213 | HPV2_213 | AB690980 | None | | | | I13V, G16E, K20R, E35D, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| Trinh (2012) | VN-31 | VN-31 | GQ161849 | None | | | | G16E, E35D, M36I, N37S, R41K, L63C, H69K, L89M, I93L | CRF01_AE |
| | VN-32 | VN-32 | GQ161850 | None | | | | G16E, E35D, M36I, R41K, L63C, H69K, L89M, I93L | CRF01_AE |
| | VN-76 | VN-76 | GQ161861 | None | | | | I13V, G16A, M36I, R41K, H69K, K70R, L89M, I93L | CRF01_AE |
| | VN-93 | VN-93 | GQ161872 | None | | | | G16E, E35D, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | VN-94 | VN-94 | GQ161873 | None | | | | L10I, G16A, E35D, M36I, N37D, R41K, H69K, K70R, L89M, I93L | CRF01_AE |
| | VN-103 | VN-103 | GQ161877 | None | | | | I13V, E35D_IN, M36L, R41K, D60E, H69K, L89M, I93L | CRF01_AE |
| | VN-105 | VN-105 | GQ161879 | None | | | | I13V, G16E, K20R, E35D, M36I, R41K, D60E, H69K, L89M, I93L | CRF01_AE |
| | VN-111 | VN-111 | GQ161884 | None | | | | G16E, K20R, E35D, M36I, R41K, L63C, H69K, L89M, I93L | CRF01_AE |
| | VN-113 | VN-113 | GQ161885 | None | | | | G16E, E35D, M36I, R41K, L63C, H69K, L89M, I93L | CRF01_AE |
| | VN-115 | VN-115 | GQ161887 | None | | | | E35D, M36I, R41K, L63P, H69K, L89M, I93L | CRF01_AE |
| | VN-33 | VN-33 | HQ876685 | None | | | | G16E, E35D, M36I, R41K, D60E, H69K, K70R, L89M, I93L | CRF01_AE |
| | VN-42 | VN-42 | HQ876689 | None | | | | E35D, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | VN-6 | VN-6 | HQ876669 | None | | | | E35D, M36I, R41K, K43R, L63P, H69K, L89M, I93L | CRF01_AE |
| | VN-15 | VN-15 | HQ876674 | None | | | | L10I, I13V, G16A, E35D, M36I, N37D, R41K, L63C, H69K, A71T, L89M, I93L | CRF01_AE |
| | VN-20 | VN-20 | HQ876677 | None | | | | L10I, G16E, K20R, E35D, M36I, R41K, L63C, H69K, L89M, I93L | CRF01_AE |
| | VN-24 | VN-24 | HQ876680 | None | | | | G16A, E35D, M36I, N37D, R41K, L63P, H69K, K70R, L89M, I93L | CRF01_AE |
| | VN-25 | VN-25 | HQ876681 | None | | | | G16E, E35D, M36I, R41K, L63C, H69K, L89M, I93L | CRF01_AE |
| | VN-28 | VN-28 | HQ876684 | None | | | | I13V, K20R, E35D, M36I, N37D, R41K, R57K, L63C, H69K, L89M, I93L | CRF01_AE |
| | VN-41 | VN-41 | HQ876688 | None | | | | G16A, E35D, M36I, N37D, R41K, L63P, H69K, K70R, L89M, I93L | CRF01_AE |
| | VN-44 | VN-44 | HQ876690 | None | | | | E35D, M36I, R41K, H69K, V82I, L89M, I93L | CRF01_AE |
| Yang (2012) | 3712 | 3712 | JQ617188 | None | | | | G16AE, E35D, M36I, H69K, L89M, I93L | CRF01_AE |
| | 3713 | 3713 | JQ617189 | None | | | | I13V, G16V, K20I, E35ED, M36I, N37D, R41K, K45KR, L63PS, H69K, K70R, L89M, I93L | CRF01_AE |
| | 3718 | 3718 | JQ617194 | None | | | | W6WL, G16E, L24LF, E35D, M36I, R41K, L63C, H69K, L89M, I93L | CRF01_AE |
| | 3727 | 3727 | JQ617203 | None | | | | K14R, G16A, E35D, M36I, N37D, R41K, H69K, L89M, I93L | CRF01_AE |
| | 3739 | 3739 | JQ617215 | None | | | | G16E, E35D, M36I, R41K, L63C, H69K, L89M, I93L | CRF01_AE |
| | 3750 | 3750 | JQ617226 | None | | | | W6WL, G16E, E35D, M36I, R41K, K45KR, L63C, H69K, L89M, I93L | CRF01_AE |
| | 3751 | 3751 | JQ617227 | None | | | | G16A, E35D, M36I, R41K, L63C, H69K, L89M, I93L | CRF01_AE |
| | 3754 | 3754 | JQ617230 | None | | | | I15IV, G16A, K20R, E35ED, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | 3761 | 3761 | JQ617237 | None | | | | W6WL, M36I, R41K, L63A, H69K, I93L | CRF01_AE |
| | 3768 | 3768 | JQ617244 | None | | | | G16E, E35D, M36I, N37S, R41K, R57RK, L63C, H69K, L89M, I93L | CRF01_AE |
| | 3773 | 3773 | JQ617249 | None | | | | L10I, I13IV, G16E, K20KR, E35D, M36I, R41K, L63C, H69Q, L89M, I93L | CRF01_AE |
| | 3775 | 3775 | JQ617251 | None | | | | I13IV, G16A, E35D, M36I, N37D, R41K, H69K, K70R, L89M, I93L | CRF01_AE |
| | 3777 | 3777 | JQ617253 | None | | | | I15IV, G16E, K20R, E35ED, M36I, R41K, K55R, D60DE, L63C, H69K, L89M, I93L | CRF01_AE |
| Yang (2012) | GZ141 | GZ141 | JN848837 | None | | | | G16GE, E35D, M36I, R41K, L63P, H69K, L89M, I93L, N98NIS | CRF01_AE |
| | GZ186 | GZ186 | JN848840 | None | | | | E35D, M36I, R41K, L63LI, H69K, L89M, I93L | CRF01_AE |
| | GZ193 | GZ193 | JN848842 | None | | | | G16E, E35D, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | GZ010 | GZ010 | JN848846 | None | | | | M36I, R41K, L63P, H69K, V82VI, L89LM, I93L | CRF01_AE |
| | GZ072 | GZ072 | JN848855 | None | | | V11I | I13V, G16E, K20R, M36I, R41K, H69K, I72V, L89M, I93L | CRF01_AE |
| | GZ091 | GZ091 | JN848859 | None | | | | I13V, G16E, L19I, E35D, M36I, R41K, H69K, I72IV, L89M, I93L | CRF01_AE |
| | GZ236 | GZ236 | JN848865 | None | | | | E35D, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | GZ109 | GZ109 | JN848866 | None | | | | E35D, M36I, R41K, R57K, L63T, H69R, L89M, I93L | CRF01_AE |
| | GZ111 | GZ111 | JN848868 | None | | | | E35D, M36I, R41K, L63P, H69K, G78GE, L89M, I93L | CRF01_AE |
| | GZ112 | GZ112 | JN848869 | None | | | | E35D, M36I, R41K, K43KE, L63P, H69K, L89M, I93L | CRF01_AE |
| | GZ115 | GZ115 | JN848871 | None | | | | L19I, K20R, E35D, M36I, R41K, L63P, H69K, I72V, L89M, I93L | CRF01_AE |
| | GZ125 | GZ125 | JN848872 | None | | | | I13V, I15V, M36I, R41K, I62V, L63P, G68E, H69R, L89M, I93L | CRF01_AE |
| | GZ158 | GZ158 | JN848878 | None | | | | I13V, E35ED, M36I, R41K, L63C, H69K, T74S, L89M, I93L | CRF01_AE |
| | GZ167 | GZ167 | JN848882 | None | | | | K20R, E35D, M36I, R41K, L63LP, H69K, L89M, I93L | CRF01_AE |
| | GZ189 | GZ189 | JN848883 | None | | | | E35D, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | GZ200 | GZ200 | JN848885 | None | | | | K20R, E35D, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | GZ204 | GZ204 | JN848886 | None | | | | I13V, I15V, E35D, M36I, R41K, L63P, H69K, L89M, I93L | CRF01_AE |
| | GZ214 | GZ214 | JN848888 | None | | | | L19I, K20R, E35D, M36I, R41K, L63P, H69K, I72V, L89M, I93L | CRF01_AE |
| | GZ108 | GZ108 | JN848893 | None | | | | E35D, M36I, R41K, R57K, L63T, H69R, L89M, I93L | CRF01_AE |
| | GZ114 | GZ114 | JN848894 | None | | | | L19I, K20R, E35D, M36I, R41K, L63P, H69K, I72V, L89M, I93L | CRF01_AE |
| | GZ120 | GZ120 | JN848896 | None | | | | L19I, E35D, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | GZ165 | GZ165 | JN848900 | None | | | | K20R, E35D, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | GZ198 | GZ198 | JN848902 | None | | | | G16E, E35N, M36I, R41K, I62V, H69K, L89M, I93L | CRF01_AE |
| | GZ206 | GZ206 | JN848903 | None | | | | G16E, K20R, E35D, M36I, R41K, R57K, H69K, K70KR, L89M, I93L, N98NS | CRF01_AE |
| | GZ208 | GZ208 | JN848904 | None | | | | E35D, M36I, R41K, H69K, K70KR, V82I, L89M, I93L | CRF01_AE |
| | GZ215 | GZ215 | JN848905 | None | | | | G16E, L19I, E35D, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | GZ221 | GZ221 | JN848907 | None | | | | E35D, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | GZ224 | GZ224 | JN848908 | None | | | | K20R, E35D, M36I, R41K, L63LP, H69K, L89M, I93L | CRF01_AE |
| | GZ245 | GZ245 | JN848913 | None | | | | L10I, L19I, E35D, M36I, R41K, L63P, H69K, L89M, I93L | CRF01_AE |
| | GZ246 | GZ246 | JN848914 | None | | | | I13V, G16E, K20KR, E35D, M36I, R41K, H69K, V82I, L89M, I93L | CRF01_AE |
| | GZ248 | GZ248 | JN848915 | None | | | | K20R, E35D, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| Chen (2013) | 11YNHH091 | 11YNHH091 | JX412354 | None | | | | E35D, M36I, R41K, D60E, L63P, H69K, K70R, L89M, I93L | CRF01_AE |
| | 11YNHH028 | 11YNHH028 | JX412337 | None | | | | G16A, E35D, M36I, R41K, L63P, H69K, L89M, I93L | CRF01_AE |
| | 11YNHH110 | 11YNHH110 | JX412359 | None | | | | M36I, R41K, L63T, H69K, L89M, I93L | CRF01_AE |
| Frentz (2013) | EHR-02775 | EHR-02775 | JX299593 | None | | | | I13V, K14R, G16E, E35D, M36I, R41K, R57RK, Q61QH, I64IL, H69K, L89M, I93L | CRF01_AE |
| | EHR-04649 | EHR-04649 | JX299622 | None | | | | I13V, K14R, E35D, M36I, R41K, K45R, L63P, H69K, V77I, L89M, I93L | CRF01_AE |
| | EHR-19229 | EHR-19229 | JX299858 | None | | | | L10I, I13V, K14R, G16E, E35D, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | EHR-21285 | EHR-21285 | JX299892 | None | | | | I13V, K14R, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | EHR-25802 | EHR-25802 | JX299989 | None | | | | I13V, K14R, I15V, E35D, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | EHR-28288 | EHR-28288 | JX300032 | None | | | | I13V, K14R, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | EHR-35542 | EHR-35542 | JX300137 | None | | | | I13V, K14R, G16E, E35D, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | EHR-35841 | EHR-35841 | JX300141 | None | | | | I13V, K14R, G16GE, E35D, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | EHR-36300 | EHR-36300 | JX300149 | None | | | | E35D, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | EHR-48895 | EHR-48895 | JX300351 | None | | | | I13IV, E35D, M36I, R41K, R57K, I62V, L63HPSY, H69K, A71V, T74TS, L89M, I93L | CRF01_AE |
| | EHR-501156 | EHR-501156 | JX300371 | None | | | | I13V, G16E, E35D, M36I, R41K, H69K, K70R, L89I, I93L | CRF01_AE |
| | EHR-50653 | EHR-50653 | JX300384 | None | | | | K14KR, E35D, M36I, R41K, R57K, H69K, L89M, I93L | CRF01_AE |
| | EHR-55961 | EHR-55961 | JX300468 | None | | | | E35D, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | EHR-56936 | EHR-56936 | JX300489 | None | | | | I13V, K14R, E35D, M36I, R41K, I64M, H69K, L89M, I93L | CRF01_AE |
| | EHR-57221 | EHR-57221 | JX300496 | None | | | | K14R, E35D, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | EHR-62720 | EHR-62720 | JX300589 | None | | | | T12TAS, I13V, K14KR, L19LV, E35D, M36I, R41K, L63P, H69K, I72IV, V77I, L89M, I93L | CRF01_AE |
| | EHR-66128 | EHR-66128 | JX300653 | None | | | | E35D, M36I, R41K, D60E, H69K, L89M, I93L | CRF01_AE |
| | EHR-76812 | EHR-76812 | JX300856 | None | | | | L19I, K20R, E35D, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | EHR-84539 | EHR-84539 | JX300972 | None | | | | I13V, K14R, E35D, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | EHR-87644 | EHR-87644 | JX301034 | None | | | | I13V, K14KR, G16E, E35D, M36I, R41K, L63LIPT, H69K, L89M, I93L | CRF01_AE |
| | EHR-91619 | EHR-91619 | JX301073 | None | | | | I13V, K14R, G16E, E35D, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | EHR-92950 | EHR-92950 | JX301087 | None | | | | I13V, K14R, E35D, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| Hawke (2013) | 14220742 | 14220742 | KC237937 | None | | | | I13V, M36I, R41K, R57RK, H69K, T74TA, L89M, I93L | CRF01_AE |
| | 16001679 | 16001679 | KC237962 | None | | | | K14R, L19Q, K20R, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | 18468564 | 18468564 | KC237999 | None | | | | L10LV, K14KR, I15IV, Q18E, L19LM, K20R, E35D, M36I, R41K, L63T, H69K, I72IT, L89M, I93L | CRF01_AE |
| | 20158678 | 20158678 | KC238032 | None | | | | I13V, I15V, M36I, R41K, Q61E, L63P, H69K, K70R, L89M, I93L | CRF01_AE |
| | 5495700 H | 5495700 H | KC238176 | None | | | | I13V, K20R, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | 6141821 H | 6141821 H | KC238201 | None | | | | I13V, E35D, M36I, R41K, I64IM, H69K, L89M, I93L | CRF01_AE |
| | 9275799 H | 9275799 H | KC238277 | None | | | | K14KR, E35D, M36I, R41K, L63P, H69K, L89M, I93L | CRF01_AE |
| Li (2013) | 2801 | 2801 | JQ901022 | None | | | | T12P, E35D, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | 2810 | 2810 | JQ901028 | None | | | | T12P, E35D, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | 2815 | 2815 | JQ901032 | None | | | | I13V, I15V, E35D, M36I, R41K, H69K, K70R, L89M, I93L | CRF01_AE |
| | 2825 | 2825 | JQ901039 | None | | | | I13V, E35D, M36I, R41K, H69K, L89M, I93L, F99FL | CRF01_AE |
| | 2830 | 2830 | JQ901044 | None | | | | K20R, E35D, M36I, R41K, H69K, K70R, L89M, I93L | CRF01_AE |
| | 2849 | 2849 | JQ901058 | None | | | | T12P, L19LI, K20R, E35D, M36I, R41K, L63P, H69K, K70R, V77I, L89M, I93L | CRF01_AE |
| | 2850 | 2850 | JQ901059 | None | | | V11I | T12A, L19V, E35D, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | 2857 | 2857 | JQ901066 | None | | | | L19M, E35D, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | 2858 | 2858 | JQ901067 | None | | | | G16E, L19I, E35D, M36I, R41K, L63T, H69K, L89M, I93L | CRF01_AE |
| | 2868 | 2868 | JQ901074 | None | | | | L19M, E35D, M36I, R41K, L63P, H69K, L89M, I93L | CRF01_AE |
| | 2879 | 2879 | JQ901085 | None | | | | T12P, E35D, M36I, R41K, L63P, H69K, K70R, L89M, I93L | CRF01_AE |
| | 2880 | 2880 | JQ901086 | None | | | | K20R, E35D, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | 2886 | 2886 | JQ901089 | None | | | | K20R, E35D, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | 2895 | 2895 | JQ901096 | None | | | | I13V, L19M, E35D, M36I, R41K, L63P, H69K, V82I, L89M, I93L | CRF01_AE |