<!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

Protease Inhibitors

Subtype CRF01_AE
Gene PR
Mutation V77I
Rx PI-naive
IncludeMixtures No
References 43
Patients 83
Isolates 84
 
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Sequences matching input query are shown below. Original reference, patient identifier, isolate name, partial treatment histories and accession number are indicated. Complete treatment histories, when available, can be accessed by clicking the isolate name. Sequences may additionally be downloaded in the fasta format, or viewed as individual or composite alignments using the options above. If the user wishes to view individual alignments of isolates for which there are multiple clones, the user can choose to view either an alignment of consensus sequences derived from the clones or an alignment of each clone as well as a consensus sequence.

Author (yr) Patient Isolate Acc# PIs WksPIMajorDRMs PIMinorDRMs OtherMutSubtype
Lan (2003)NTHvr75NTHvr75AY238315None   I13IV, E35D, M36I, R41K, L63LP, H69K, V77I, V82I, L89M, I93LCRF01_AE
Brown (2005)BB_96TH_NI114996TH_1149AY713426None   I13V, E35D, M36I, R41K, H69K, V77I, L89M, T91VCRF01_AE
Hsu (2005)BAA157677BAA157677AY870182None   I13V, I15V, E35D, M36I, R41K, R57K, H69K, V77I, L89I, T91VCRF01_AE
Ly (2005)NL_KHM_HM35KHM_HM35DQ013599None   I13V, E35D, M36I, R41K, D60E, H69K, V77I, L89M, I93LCRF01_AE
Tee (2005)04MYKL189704_1897AY904609None   I13V, E35D, M36I, R41K, L63P, H69T, K70R, A71V, I72V, V77I, I93LCRF01_AE
 03MYKL135803_1358AY904534None   I13V, E35D, M36I, R41K, H69K, V77I, L89M, T91NCRF01_AE
 03MYKL152103_1521AY904553None   I13V, K20R, E35D, M36I, R41K, H69K, V77I, L89MCRF01_AE
Marechal (2006)JF_005JF_005DQ443627None   L10V, I13V, K14R, G16A, E35D, M36I, N37DE, R41K, R57K, D60E, Q61N, L63M, C67E, H69K, V77I, L89MCRF01_AE
Tee (2006)KL04305_043.1DQ366666None   G16E, H69K, V77I, I93LCRF01_AE
Baker (2007)P0018P0018-240105EF186133None   I13V, K14R, I15V, E35D, M36L, N37D, R41K, L63T, H69K, V77I, L89MCRF01_AE
Gatanaga (2007)C03-2066174-1C03-2066174-1AB640471None   L10V, I13V, G16AE, E35D, M36I, R41K, K45KR, R57K, I62IV, L63LP, H69K, V77I, L89MCRF01_AE
Liu (2007)fj44fj44EF432677None  L33FI13V, M36I, R41K, L63I, H69K, V77I, L89M, I93LCRF01_AE
 fj88fj88EF432707None   I13V, E35D, M36I, R41K, K55R, L63P, H69K, I72V, V77ICRF01_AE
Ibe (2008)164164AB356211None   E35D, M36I, R41K, L63P, H69K, I72V, T74S, V77I, L89M, I93LCRF01_AE
Nguyen (2008)046VN046 None   I13V, E35D, M36I, R41K, D60E, H69K, V77I, L89M, T91V, F99XCRF01_AE
Sirivichayakul (2008)NBC-9NBC-9PrJQ364309None   I13V, E35D, M36I, R41K, H69K, V77I, L89MCRF01_AE
Ayouba (2009)FD0471FD0471PIGQ352070None   I13V, E35D, M36I, R41K, L63P, H69K, V77I, L89MCRF01_AE
Fujisaki (2009)631631AB442295None   I13V, K20R, E35D, M36I, R41K, H69K, V77I, L89M, L97ICRF01_AE
Ishizaki (2009)A1A1FJ007113None   I13V, E35D, M36I, R41K, H69K, V77I, L89MCRF01_AE
Lee (2009)S07026S07026EU715185None   K20R, E35D, M36I, R41K, R57K, H69K, V77I, L89M, I93L, L97ICRF01_AE
Sahbandar (2009)IDJKT070IDJKT070AB468573None   I13V, K20R, E35D, M36I, R41K, K45R, H69K, V77I, L89M, L97ICRF01_AE
Carr (2010)0096MA01CM.0096MAGU201497None   I13V, G17E, K20I, E34K, M36I, P39S, R57K, Q61N, I62L, L63S, C67E, H69K, V77I, L89MCRF01_AE
Han (2010)LN105LN105FJ531409None   I13V, L19M, E35D, M36I, R41K, H69K, V77I, L89MCRF01_AE
 LN123LN123FJ531420None   L19M, E35D, M36I, R41K, R57K, H69K, K70R, V77I, L89MCRF01_AE
Phan (2010)NB01NB01AB519523None   I15V, G16E, E35D, M36I, R41K, H69R, V77I, V82I, L89M, I93LCRF01_AE
 NB24NB24AB519536None   L10I, I13V, G16E, E35D, M36I, R41K, H69K, K70R, V77I, L89MCRF01_AE
 AH01AH01AB519558None   I13V, I15V, E35D, M36I, R41K, H69K, V77I, L89MCRF01_AE
 NB07NB07AB519609None   I13V, G16E, E35D, M36I, R41K, H69K, K70R, V77I, L89MCRF01_AE
Zolfo (2010)A13412A 13412 M18HM565700None   L10I, I13V, G16E, K20I, E35D, M36I, R41K, H69K, K70G, V77I, L89MCRF01_AE
  A 13412 M24HM565661None   L10I, I13V, G16E, K20I, E35DN, M36I, R41K, H69K, K70GR, V77I, L89MCRF01_AE
Kao (2011)Pat33826584HQ657702None   I13V, I15V, L19M, E35D, M36I, R41K, H69K, V77I, L89MCRF01_AE
 Pat28527003HQ657755None   I13V, G16E, K20R, E35D, M36I, N37ND, R41K, R57RK, I62V, H69K, V77I, L89MCRF01_AE
Lazaro (2011)TG-M6TG-M6HQ542676None   I13V, K14KR, Q18H, E35D, M36I, R41K, R57RK, L63PS, H69K, V77I, L89MCRF01_AE
Ng (2011)HM004HM004HQ539039None   Q7R, I13V, G16E, K20R, E35D, M36I, R41K, H69K, V77I, L89M, T91A, L97ICRF01_AE
 HM104HM104HQ539130None   I13V, K20R, E35D, M36I, R41K, H69K, V77I, L89MCRF01_AE
Su (2011)LZ2123LZ2123HQ588216None   T12A, I13V, M36I, R41K, H69R, V77I, L89M, I93LCRF01_AE
 LZ2130LZ2130HQ588217None   T12A, I13V, M36I, R41K, H69R, V77I, L89M, I93LCRF01_AE
Ye (2011)BJ07425BJ07425JF906641None   I13V, L19I, E35D, M36I, R41K, H69K, K70R, V77I, L89MCRF01_AE
 BJ07546BJ07546JF906667None   I13V, L19T, E35D, M36I, R41K, H69K, I72V, V77I, L89MCRF01_AE
An (2012)09LNA02509LNA025JX960634None   I13V, L19M, E35D, M36I, R41K, L63P, H69K, K70R, V77I, L89MCRF01_AE
Chamberland (2012)C405SC405SHQ267537None   I13V, G17E, K20I, E35G, M36I, N37S, R41K, I62V, H69K, I72M, V77I, L89MCRF01_AE
Chen (2012)YN09DH0001YN09DH0001JQ658474None   I13V, E35D, M36I, R41K, H69K, I72IV, V77I, V82I, L89MCRF01_AE
 YN09DH0002YN09DH0002JQ658475None   I13V, E35D, M36I, R41K, H69K, V77I, V82I, L89MCRF01_AE
 YN09DH0155YN09DH0155JQ658612None   I13V, E35D, M36I, N37D, R41K, L63P, H69K, V77I, L89MCRF01_AE
Rolland (2012)AA001a12LAA001a12LJX446647None   I13V, L19M, E35D, M36I, R41K, I62V, L63P, H69K, V77I, V82I, L89MCRF01_AE
 AA049a_WG11AA049a_WG11JX447266None   L10I, I13V, E35D, M36I, R41K, H69K, V77I, L89MCRF01_AE
 AA080a13LAA080a13LJX447597None   I13V, A28AV, E35D, M36I, R41K, L63P, H69K, V77I, L89MCRF01_AE
 AA127a01LAA127a01LJX448278None   I13V, E35D, M36I, L63P, H69K, V77I, L89MCRF01_AE
Telan (2012)1108462211084622AB747460None   K20R, M36I, R41K, H69K, K70R, V77I, L89M, I93LCRF01_AE
 1112847611128476AB747503None   T12P, I13V, E35D, M36I, R41K, L63C, H69K, T74S, V77I, L89MCRF01_AE
Yang (2012)GZ007GZ007JN848841None   I13V, G16E, E35D, M36I, R41K, H69K, V77I, L89MCRF01_AE
 GZ023GZ023JN848849None   I13V, G16E, E35D, M36I, R41K, K43KR, L63A, H69K, I72V, V77I, L89MCRF01_AE
 GZ154GZ154JN848876None   I13IV, E35D, M36I, R41K, L63P, I64IM, H69K, V77I, L89M, I93IFCRF01_AE
 GZ055GZ055JN848889None   I13V, E35D, M36I, R41K, L63P, I64IM, H69K, V77I, L89MCRF01_AE
Zeng (2012)CN1222CN1222JQ028232None   G16E, E35D, M36I, L63C, H69K, V77I, L89MCRF01_AE
Billong (2013)MR025MR025KF192213None  L33FI13V, K14R, E35N, N37E, R41K, H69K, V77I, L89M, I93MCRF01_AE
Chow (2013)MY2KA791MY2KA791KC478055None   I13V, K20R, E35D, M36I, R41K, H69K, V77I, L89MCRF01_AE
Frentz (2013)EHR-04649EHR-04649JX299622None   I13V, K14R, E35D, M36I, R41K, K45R, L63P, H69K, V77I, L89M, I93LCRF01_AE
 EHR-24162EHR-24162JX299960None   E35D, M36I, R41K, R57K, H69K, V77I, L89MCRF01_AE
 EHR-62720EHR-62720JX300589None   T12TAS, I13V, K14KR, L19LV, E35D, M36I, R41K, L63P, H69K, I72IV, V77I, L89M, I93LCRF01_AE
Kiertiburanakul (2013)R71TS284R71TS284KC921753None   T12P, I13V, I15V, E35D, M36I, R41K, L63S, H69K, V77I, L89MCRF01_AE
 R12065R12065KC994212None   I13V, E35D, M36I, R41K, I62IV, L63P, H69K, K70R, V77I, V82VI, L89M, I93IMCRF01_AE
 R71TS293R71TS293KC921760None   E35D, M36I, R41K, H69K, V77I, L89MCRF01_AE
 R71TS248R71TS248KC921719None   E35D, M36I, R41K, H69K, V77I, L89MCRF01_AE
 R41163R41163KC970899None   H69K, T74S, V77I, L89M, I93LCRF01_AE
 R71112R71112KC921417None   I13V, E35D, M36I, R41K, L63P, H69K, K70R, V77I, L89MCRF01_AE
 R71TS228R71TS228KC921699None   I13V, E35D, M36I, R41K, H69K, V77I, L89MCRF01_AE
 R41058R41058KC970943None   I13V, E35D, M36I, R41K, K45R, L63P, H69K, V77I, L89MCRF01_AE
 R71TS244R71TS244KC921715None   I13V, E35D, M36I, R41K, H69K, V77I, L89MCRF01_AE
 R73019R73019KC810568None   I13V, E35D, M36I, R41K, L63P, H69K, K70R, I72V, V77I, L89MCRF01_AE
 R41131R41131KC970855None   G16E, E35D, M36I, R41K, H69K, K70R, V77I, L89MCRF01_AE
 R71TS221R71TS221KC921692None   L10V, I13V, L19V, L33V, E35D, M36I, R41K, L63P, H69K, V77I, L89MCRF01_AE
 R12TS007R12TS007KC994319None   E35D, M36I, R41K, H69K, V77I, L89ICRF01_AE
 R73045R73045KC810336None   I13V, E35D, M36I, R41K, R57RK, L63A, H69K, V77I, G78R, L89MCRF01_AE
 R71144R71144KC921847None   I13V, E35D, M36I, R41K, L63P, H69K, I72V, V77I, L89MCRF01_AE
 R72146R72146KC856975None   I13V, E35D, M36I, N37D, R41K, L63P, H69K, K70R, V77I, L89M, I93IVCRF01_AE
 R72122R72122KC856954None   I13V, G16E, K20I, E35DN, M36I, N37D, R41K, H69K, K70R, I72IV, V77I, L89MCRF01_AE
Li (2013)28492849JQ901058None   T12P, L19LI, K20R, E35D, M36I, R41K, L63P, H69K, K70R, V77I, L89M, I93LCRF01_AE
Li (2013)22162216JQ302684None   E35D, M36I, R41K, L63P, H69K, V77I, L89MCRF01_AE
Lunar (2013)3571-073571-07JX046416None   L10V, I13V, G16E, E35D, M36I, R41K, H69K, V77I, L89MCRF01_AE
Ong (2013)08MYKL00508MYKL005KC181246None   I13V, K20R, E35D, M36I, R41K, H69K, V77I, L89M, L97ICRF01_AE
Wu (2013)HFP108HFP108KC203310None   K20KR, E35D, M36I, R41K, R57K, L63P, H69K, K70R, V77I, L89M, I93LCRF01_AE
 BB77Frag1BB77Frag1KC183775None   I13V, G16E, E35D, M36I, R41K, H69K, K70KR, V77I, L89MCRF01_AE
 HFP103HFP103KC203309None   G16E, E35D, M36I, R41K, H69K, V77I, L89ICRF01_AE

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