<!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

Protease Inhibitors

Subtype CRF01_AE
Gene PR
Mutation E35N
Rx PI-naive
IncludeMixtures No
References 21
Patients 27
Isolates 27
 
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Sequences matching input query are shown below. Original reference, patient identifier, isolate name, partial treatment histories and accession number are indicated. Complete treatment histories, when available, can be accessed by clicking the isolate name. Sequences may additionally be downloaded in the fasta format, or viewed as individual or composite alignments using the options above. If the user wishes to view individual alignments of isolates for which there are multiple clones, the user can choose to view either an alignment of consensus sequences derived from the clones or an alignment of each clone as well as a consensus sequence.

Author (yr) Patient Isolate Acc# PIs WksPIMajorDRMs PIMinorDRMs OtherMutSubtype
Fonjungo (2002)CM93CM93AF406730None   I13V, K20R, E35N, M36I, N37D, R41K, H69K, L89M, I93LCRF01_AE
Lan (2003)NTHvr88NTHvr88AY238301None   G16GE, E35N, M36I, R41K, H69K, L89MCRF01_AE
Tee (2006)MYKL147703MYKL1477AY960938None   I13V, E35N, M36I, R41K, Y59D, H69K, I72V, T74S, L89M, I93LCRF01_AE
Sirivichayakul (2008)BED-32BED-32PrJQ364284None   G16E, E35N, M36I, R41K, L63S, H69K, I72V, I93LCRF01_AE
 BED-36BED-36PrJQ364288None   G16E, E35N, M36V, R41K, L63S, H69K, L89M, I93LCRF01_AE
 NBC-10NBC-10PrJQ364310None   I13V, G16E, E35N, M36I, R41K, H69K, K70R, L89MCRF01_AE
Aghokeng (2009)DD0242DD0242GU191643None   I13V, G16E, E35N, M36I, N37D, R41K, K45R, H69K, I72R, L89MCRF01_AE
Ayouba (2009)R02R02_PRGQ352110None   G16E, E35N, M36I, R41K, L63C, H69K, L89MCRF01_AE
 R43R43_PRGQ352143None   I13V, G16E, E35N, M36I, R41K, K45R, L63C, H69K, L89MCRF01_AE
Ishizaki (2009)A253A253aFJ007237None   I13V, E35N, M36I, R41K, H69K, L89MCRF01_AE
Koyalta (2009)19TCHAD-19FJ688178None   I13V, G16E, L19I, E35N, M36I, N37D, R41K, K45R, R57K, L63H, H69K, I72V, V75I, L89MCRF01_AE
Liao (2009)VNAG22097VNAG220FJ185256None   I13V, E35N, M36I, N37D, R41K, H69K, L89MCRF01_AE
 VNAG22197VNAG221FJ185257None   I13V, E35N, M36I, N37D, R41K, H69K, L89M, I93MCRF01_AE
 VNAG22397VNAG223FJ185258None   I13V, E35N, M36I, R41K, H69K, L89MCRF01_AE
Nouhin (2009)KC55KC55PROTFJ531988None   L5LF, I15Y, E35N, M36I, R41K, L63C, H69K, V82I, L89M, I93LCRF01_AE
Dean (2011)IVVI7390IVVI7390JQ312419None   T12TA, I15IV, G16E, E35N, M36I, R41K, R57K, L63C, H69K, I93LCRF01_AE
Lazaro (2011)DN-M3DN-M3HQ542656None   I13V, G16A, E35N, M36I, N37D, R41K, H69K, L89MCRF01_AE
Ng (2011)HM007HM007HQ539042None   I13V, E35N, M36I, R41K, H69K, I72V, L89MCRF01_AE
Caron (2012)Gab082111Gab082111HQ541935None   I13V, L19I, E35N, M36L, N37D, R41K, L63P, H69K, L89MCRF01_AE
 Gab091183Gab091183JN705007None   E35N, M36V, N37D, R41K, L63G, H69K, L89MCRF01_AE
Chen (2012)YN10DH0119YN10DH0119JQ658739None   G16E, E35N, M36I, R41K, G49E, G51E, V56I, E65K, H69K, L89M, I93LCRF01_AE
Rolland (2012)AA106c02LAA106c02LJX448011None   E35N, M36I, R41K, R57K, H69K, L89MCRF01_AE
Ssemwanga (2012)RCC_TDR_828529RCC_TDR_828529JQ266054None   L10I, I13V, K14R, G16E, E35N, M36I, P39S, R41K, R57K, H69K, K70E, L89MCRF01_AE
Tran (2012)HPA190HPA190AB690902None   L10V, I13V, G16E, E35N, M36I, R41K, H69K, L89MCRF01_AE
Yang (2012)GZ198GZ198JN848902None   G16E, E35N, M36I, R41K, I62V, H69K, L89M, I93LCRF01_AE
Youngpairoj (2012)cm161bbcm161bbDQ166434None   I13V, K20R, E35N, M36I, N37D, R41K, L63S, H69K, L89MCRF01_AE
Frentz (2013)EHR-779261EHR-779261JX300883None   I13V, E35N, M36I, N37D, R41K, L63P, H69K, L89MCRF01_AE

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