Protease Inhibitors

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Protease Inhibitors

Subtype	CRF01_AE
Gene	PR
Mutation	E35D
Rx	PI-naive
IncludeMixtures	No

References	150
Patients	3063
Isolates	3251

Sequences matching input query are shown below. Original reference, patient identifier, isolate name, partial treatment histories and accession number are indicated. Complete treatment histories, when available, can be accessed by clicking the isolate name. Sequences may additionally be downloaded in the fasta format, or viewed as individual or composite alignments using the options above. If the user wishes to view individual alignments of isolates for which there are multiple clones, the user can choose to view either an alignment of consensus sequences derived from the clones or an alignment of each clone as well as a consensus sequence.

Author (yr)	Patient	Isolate	Acc#	PIs	PIMajorDRMs	PIMinorDRMs	OtherMut	Subtype
Winslow (1995)	H9145Thai	H9145Thai	U12741	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	H9156Thai	H9156Thai	U12742	None			T4X, I13V, E35D, M36I, R41K, H69K, V82I, L89M	CRF01_AE
	H9461Thai	H9461Thai	U12743	None			I13V, K20R, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	H9466Thai	H9466Thai	U12744	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
Carr (1996)	CM240	CM240	U54771	None			I13V, E35D, M36I, R41K, R57K, H69K, L89M	CRF01_AE
Gao (1996)	93TH253	93TH253	U51189	None			E35D, M36I, R41K, H69K, L89M	CRF01_AE
Cornelissen (1997)	92TH003	92TH003	AF009382	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	92TH005	92TH005	AF009383	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	92TH007	92TH007	AF009384	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	92TH009	92TH009	AF009385	None			I13V, E35D, M36I, R41K, L63P, H69K, I72V, L89M	CRF01_AE
	92TH011	92TH011	AF009386	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	92TH015	92TH015	AF009387	None			I13V, E35D, M36I, P39T, R41K, H69K, L89M	CRF01_AE
	92TH018	92TH018	AF009388	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	92TH019	92TH019	AF009389	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	92TH021	92TH021	AF009391	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	92TH022	92TH022	AF009392	None			E35D, M36I, R41K, H69K, L89M, I93L	CRF01_AE
	92TH023	92TH023	AF009393	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	92TH024	92TH024	AF009394	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
Gatanaga (1999)	Gat-R1	agaR1	AB020911	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
Anderson (2000)	CD11697	CD11697	AF197340	None			L5F, I13V, G16E, E35D, M36I, H69K, K70R, L89M	CRF01_AE
	CF4071	CF4071	AF197341	None			L10I, I13V, E35D, M36I, R41K, L63I, H69K, L89M	CRF01_AE
	93TH057	93TH057	AF197338	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	93TH065	93TH065	AF197339	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
Piyasirisilp (2000)	SP_11F	SP_11F	AY008718	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	SP_2F	SP_2F	AY008714	None			E35D, M36I, R41K, H69K, L89M, I93L	CRF01_AE
Vergne (2000)	LVMP38	LVMP38	AJ287043	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	LVMP601	LVMP601	AJ287053	None			I13V, E35D, M36I, R41K, L63C, H69K, L89M	CRF01_AE
Caumont (2001)	AC3	AC3	AF326196	None			I13V, E35D, M36I, R41K, H69KR, L89M	CRF01_AE
	AC23	AC23	AF326195	None			L10V, I13V, I15IV, E35D, M36I, R41K, R57K, H69K, L89M	CRF01_AE
	AC16	AC16	AF326194	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	AC11	AC11	AF326174	None			I13V, G16E, E35D, M36I, R41K, H69I, I72R, L89M	CRF01_AE
	AC9	AC9	AF326190	None			I13V, G16E, E35D, M36I, R41K, L63C, H69K, L89M	CRF01_AE
	AC43	AC43	AF326189	None			G16E, E35D, M36I, R41K, L63C, H69K, L89M	CRF01_AE
	AC42	AC42	AF326188	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	AC41	AC41	AF326187	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	AC40	AC40	AF326186	None			I13V, E35D, M36I, R41K, H69K, L89M, I93IL	CRF01_AE
	AC39	AC39	AF326185	None			G16E, E35D, M36I, R41K, L63C, H69K, L89M	CRF01_AE
	AC36	AC36	AF326184	None			I13V, E35D, M36I, R41K, H69K, L89M, I93L	CRF01_AE
	AC35	AC35	AF326183	None			I13V, G16E, E35D, M36I, R41K, L63C, H69K, L89M	CRF01_AE
	AC34	AC34	AF326182	None			I13V, G16E, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	AC32	AC32	AF326181	None			I13V, G16E, E34K, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	AC31	AC31	AF326180	None			I13IV, I15V, G16E, E35D, M36I, R41K, L63C, H69K, L89M	CRF01_AE
	AC27	AC27	AF326179	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	AC22	AC22	AF326178	None			L19Q, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	AC20	AC20	AF326177	None			I13V, E35D, M36I, R41K, H69K, L89M, F99FL	CRF01_AE
	AC19	AC19	AF326176	None			I13IV, G16GE, E35D, M36I, R41K, L63C, H69K, L89M	CRF01_AE
	AC10	AC10	AF326173	None			L10LI, I13IV, E35D, M36I, R41K, H69K, L89M, I93IL	CRF01_AE
Sirivichayakul (2001)	SSGr6	Gr6	AF191196	None			E35D, M36I, R41K, H69K, L89M	CRF01_AE
	SS045133	045133	AF191195	None			E35D, M36I, R41K, H69K, L89M	CRF01_AE
	SS045127	045127	AF191193	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	SS045123	045123	AF191192	None			I13V, I15V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	SS045108	045108	AF191189	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	SS045107	045107	AF187039	None			I13V, E35D, M36I, R41K, H69K, K70R, L89M	CRF01_AE
	SS045103	045103	AF187038	None			I13V, E35D, M36I, R41K, K45R, H69K, L89M, F99L	CRF01_AE
	SS045098	045098	AF187037	None			L10I, I13V, G16E, E35D, M36I, R41K, L63H, H69K, L89M, I93V	CRF01_AE
Eshleman (2002)	144167x	144167x	AF410240	None			I13V, E35D, M36I, R41K, H69K, V77VI, L89M	CRF01_AE
Fonjungo (2002)	CM117	CM117	AF406709	None			I13V, K20R, E35D, M36I, N37D, R41K, H69K, L89M, I93L	CRF01_AE
Ariyoshi (2003)	JPN43	JPN43A	AY900689	None			I13V, I15V, E35D, M36I, R41K, H69KQ, L89M	CRF01_AE
	JPN27	JPN27A	AY900690	None			I13V, G17E, K20R, E35D, M36I, R41K, R57RK, I62IV, H69K, L89M	CRF01_AE
		JPN27B		None			I13V, G17E, K20R, E35D, M36I, R41K, I62V, H69K, L89M	CRF01_AE
	JPN29	JPN29	AY900694	None			E35D, M36I, N37NS, R41K, H69K, L89M	CRF01_AE
	JPN10	JPN10	AY900695	None			I13V, E35D, M36I, R41K, L63P, H69K, L89M, F99FL	CRF01_AE
	JPN16	JPN16	AY900700	None			L10LI, I13IV, E35D, M36I, R41K, R57RK, I62IV, H69K, V82VI, L89M	CRF01_AE
	JPN36	JPN36	AY900863	None			I13V, I15IV, E35D, M36I, R41K, L63PS, H69K, L89M	CRF01_AE
	JPN1	JPN1	AY900866	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	JPN5	JPN5		None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	JPN20	JPN20		None			I13V, E35D, M36I, R41K, K45R, H69K, L89M	CRF01_AE
	JPN23	JPN23	AY900870	None			I13V, E35D, M36I, R41K, Y59YC, H69K, L89M	CRF01_AE
Hanna (2003)	HG051	HG051	AY049627	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
Huang (2003)	CM235	CM235	AF447816	None			I13V, E35D, M36I, R41K, H69K, K70R, L89M	CRF01_AE
	POC30506	POC30506	AF447817	None			I13V, I15V, E35D, M36I, R41K, R57K, H69K, L89M	CRF01_AE
	ID12	ID12	AF447824	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	ID17	ID17	AF447825	None			I13V, E35D, M36I, R41K, R57K, H69K, L89M	CRF01_AE
	NP1465	NP1465	AF447827	None			I15V, E35D, M36I, R41K, L63P, H69K, L89M, I93L	CRF01_AE
	42368	42368	AF447835	None			I13V, I15V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	CM238	CM238	AF447838	None			I13IV, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	NP03	NP03	AF447840	None			I13V, K20KR, E35D, M36I, N37D, R41K, H69K, V82VI, L89M	CRF01_AE
Jorgensen (2003)	JLB_Pat19	HIM419445	AJ419445	None			I13V, L33V, E35D, M36I, R41K, K45R, L63P, H69K, L89M	CRF01_AE
	JLB_Pat67	HIM419493	AJ419493	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	JLB_Pat88	HIM419514	AJ419514	None			T31TP, E35D, M36I, R41K, H69K, L89M	CRF01_AE
Lan (2003)	NTHvr100	NTHvr100	AY238225	None			G16E, E35D, M36I, P39S, R41K, L63C, H69K, L89M	CRF01_AE
	NTHvr101	NTHvr101	AY238267	None			I13IV, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	NTHvr102	NTHvr102	AY238226	None			L10I, I13V, G16E, E35D, M36I, R41K, L63C, H69K, I72IV, L89M	CRF01_AE
	NTHvr103	NTHvr103	AY238268	None			G16E, E35D, M36I, R41K, D60E, H69K, L89M, I93L	CRF01_AE
	NTHvr104	NTHvr104	AY238269	None			I13V, E35D, M36I, R41K, E65D, H69K, L89M	CRF01_AE
	NTHvr105	NTHvr105	AY238270	None			G16E, E35D, M36I, R41K, L63C, H69K, L89M	CRF01_AE
	NTHvr107	NTHvr107	AY238272	None			I13V, G16A, E35D, M36I, N37D, R41K, H69K, K70R, L89M	CRF01_AE
	NTHvr108	NTHvr108	AY238273	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	NTHvr109	NTHvr109	AY238274	None			I13IV, K20I, E35D, M36I, R41K, H69K, V82VI, L89M	CRF01_AE
	NTHvr11	NTHvr11	AY238162	None			T12P, I13V, I15IV, E35D, M36I, R41K, H69K, K70R, L89M	CRF01_AE
	NTHvr110	NTHvr110	AY238275	None			I13V, K20R, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	NTHvr111	NTHvr111	AY238276	None			I13IV, I15V, E35D, M36I, R41K, D60E, H69K, L89M	CRF01_AE
	NTHvr112	NTHvr112	AY238277	None			G16E, E35D, M36I, R41K, L63C, H69K, L89M	CRF01_AE
	NTHvr113	NTHvr113	AY238144	None			G16E, L19X, E35D, M36I, R41K, G52S, L63C, H69K, L89M	CRF01_AE
	NTHvr114	NTHvr114	AY238278	None			I13V, G16E, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	NTHvr115	NTHvr115	AY238279	None			G16E, E35D, M36I, R41K, L63C, H69K, L89M	CRF01_AE
	NTHvr116	NTHvr116	AY238280	None			I13V, G16A, E35D, M36I, N37D, R41K, H69K, K70R, L89M	CRF01_AE
	NTHvr117	NTHvr117	AY238281	None			G16E, E35D, M36I, R41K, L63C, H69K, L89M	CRF01_AE
	NTHvr118	NTHvr118	AY238282	None			L10I, I13V, G16GE, E35D, M36I, R41K, L63C, H69K, L89M	CRF01_AE
	NTHvr119	NTHvr119	AY238283	None			E35D, M36I, R41K, Y59YN, L63C, H69K, L89M	CRF01_AE
	NTHvr12	NTHvr12	AY238163	None			E35D, M36I, R41K, H69K, L89M	CRF01_AE
	NTHvr120	NTHvr120	AY238227	None			I13V, G16A, K20KR, E35D, M36I, N37D, R41K, H69K, K70R, L89M	CRF01_AE
	NTHvr121	NTHvr121	AY238228	None			L10LV, I13IV, G16A, E35D, M36I, N37D, R41K, K43KR, K45KR, H69K, K70KR, L89M	CRF01_AE
	NTHvr122	NTHvr122	AY238229	None			I15IV, E35D, M36I, R41K, L63LP, H69K, L89M, I93L	CRF01_AE
	NTHvr123	NTHvr123	AY238230	None			I13V, E35D, M36I, R41K, L63C, H69K, L89M	CRF01_AE
	NTHvr124	NTHvr124	AY238231	None			L10LI, I13IV, K14KR, G16E, E35D, M36I, R41K, L63C, H69K, L89M	CRF01_AE
	NTHvr125	NTHvr125	AY238232	None			L10I, I13V, G16A, E35D, M36I, N37D, R41K, I62IV, H69K, K70R, L89M	CRF01_AE
	NTHvr126	NTHvr126	AY238233	None			L10LI, G16E, E35D, M36I, R41K, L63C, H69K, L89M	CRF01_AE
	NTHvr127	NTHvr127	AY238234	None			I13V, G16A, E35D, M36I, N37D, R41K, H69K, K70R, L89M	CRF01_AE
	NTHvr128	NTHvr128	AY238235	None			I13IV, E35D, M36I, R41K, L63X, H69K, L89M	CRF01_AE
	NTHvr129	NTHvr129	AY238236	None			G16E, E35D, M36I, R41K, L63C, H69K, K70R, P79H, L89M	CRF01_AE
	NTHvr130	NTHvr130	AY238237	None			I13V, E35D, M36I, R41K, R57K, H69K, K70R, L89M	CRF01_AE
	NTHvr131	NTHvr131	AY238238	None			I13V, G16A, E35D, M36I, R41K, H69K, L89M, Q92QL	CRF01_AE
	NTHvr132	NTHvr132	AY238239	None			E35D, M36I, R41K, H69K, L89M	CRF01_AE
	NTHvr133	NTHvr133	AY238240	None			I13V, L19IM, E35D, M36I, R41K, L63C, H69K, L89M	CRF01_AE
	NTHvr134	NTHvr134	AY238241	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	NTHvr135	NTHvr135	AY238242	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	NTHvr136	NTHvr136	AY238243	None			I13V, E35D, M36I, R41K, H69K, K70R, L89M	CRF01_AE
	NTHvr137	NTHvr137	AY238244	None			T12TA, I13IV, K14KR, G16A, E35D, M36I, N37D, R41K, H69K, K70R, L89M	CRF01_AE
	NTHvr138	NTHvr138	AY238245	None			I13V, G16A, E35D, M36I, N37D, R41K, R57K, H69K, K70R, L89M	CRF01_AE
	NTHvr139	NTHvr139	AY238246	None			G16A, E35D, M36I, N37D, R41K, H69K, K70R, L89M	CRF01_AE
	NTHvr14	NTHvr14	AY238164	None			L10LI, I13IV, E35D, M36I, R41K, L63P, H69K, L89M	CRF01_AE
	NTHvr140	NTHvr140	AY238247	None			G16E, E35D, M36I, R41K, D60E, L63C, H69K, I72IV, L89M, I93L	CRF01_AE
	NTHvr141	NTHvr141	AY238248	None			I13IV, K14KR, G16GE, E35D, M36I, R41K, L63C, H69K, L89M	CRF01_AE
	NTHvr142	NTHvr142	AY238249	None			G16E, E35D, M36MI, R41K, H69K, L89M	CRF01_AE
	NTHvr143	NTHvr143	AY238250	None			G16E, E35D, M36I, R41K, L63C, H69K, L89M	CRF01_AE
	NTHvr145	NTHvr145	AY238251	None			I13IV, G16A, E35D, M36I, N37D, R41K, R57RK, H69K, K70R, L89M	CRF01_AE
	NTHvr146	NTHvr146	AY238252	None			G16E, E35D, M36I, R41K, L63C, H69K, L89M	CRF01_AE
	NTHvr148	NTHvr148	AY238253	None			I13IV, G16GE, K20R, E35D, M36I, R41K, L63CF, G68GV, H69K, L89M	CRF01_AE
	NTHvr149	NTHvr149	AY238254	None			I13V, G16E, E35D, M36I, R41K, H69K, K70R, L89M	CRF01_AE
	NTHvr150	NTHvr150	AY238145	None			G16E, K20R, E35D, M36I, R41K, H69K, L89M, I93L	CRF01_AE
	NTHvr151	NTHvr151	AY238255	None			G16E, E35D, M36I, R41K, L63C, H69K, L89M, I93L	CRF01_AE
	NTHvr152	NTHvr152	AY238256	None			G16E, E35D, M36I, R41K, L63C, H69K, L89M	CRF01_AE
	NTHvr153	NTHvr153	AY238257	None			W6X, I13V, E35D, M36I, R41K, L63C, H69K, L89M	CRF01_AE
	NTHvr154	NTHvr154	AY238258	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	NTHvr156	NTHvr156	AY238259	None			G16E, E35D, M36I, R41K, L63C, H69K, L89M, I93IL	CRF01_AE
	NTHvr157	NTHvr157	AY238260	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	NTHvr158	NTHvr158	AY238261	None			I13IV, G16E, K20KR, E35D, M36I, R41K, K43KR, L63C, H69K, V77VI, L89M	CRF01_AE
	NTHvr16	NTHvr16	AY238165	None			I13V, G16E, L19LM, E35D, M36I, R41K, H69K, K70R, L89M	CRF01_AE
	NTHvr160	NTHvr160	AY238263	None			I13V, G16E, E35D, M36I, R41K, H69K, K70R, L89M	CRF01_AE
	NTHvr161	NTHvr161	AY238264	None			E35D, M36I, R41K, L63C, H69K, L89M	CRF01_AE
	NTHvr162	NTHvr162	AY238265	None			I13V, K14KR, K20R, E35D, M36I, R41K, R57RK, L63LP, H69K, L89M	CRF01_AE
	NTHvr163	NTHvr163	AY238146	None			L5LR, I13V, G16E, K20R, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	NTHvr164	NTHvr164	AY238266	None			I15V, G16E, E35D, M36I, R41K, L63C, H69K, L89M, I93L	CRF01_AE
	NTHvr165	NTHvr165	AY238202	None			G16E, E35D, M36I, R41K, L63C, H69K, L89M	CRF01_AE
	NTHvr167	NTHvr167	AY238203	None			I15V, G16E, E35D, M36I, R41K, K43KR, L63LR, H69K, L89M, I93IL	CRF01_AE
	NTHvr168	NTHvr168	AY238204	None			I13IV, G16GE, E35D, M36I, R41K, L63C, H69K, L89M	CRF01_AE
	NTHvr169	NTHvr169	AY238205	None			G16GE, E35D, M36I, R41K, H69K, L89M, I93L	CRF01_AE
	NTHvr17	NTHvr17	AY238166	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	NTHvr171	NTHvr171	AY238207	None			G16E, E35D, M36I, R41K, L63C, H69K, L89M, I93L	CRF01_AE
	NTHvr172	NTHvr172	AY238208	None			I13V, G16E, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	NTHvr173	NTHvr173	AY238209	None			I13IV, G16E, E35D, M36I, P39PS, R41K, L63C, H69K, K70R, L89M	CRF01_AE
	NTHvr176	NTHvr176	AY238212	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	NTHvr177	NTHvr177	AY238147	None			G16E, E35D, M36I, R41K, H69K, K70R, L89M, I93L	CRF01_AE
	NTHvr178	NTHvr178	AY238213	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	NTHvr179	NTHvr179	AY238214	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	NTHvr180	NTHvr180	AY238215	None			I13V, G16E, E35D, M36I, R41K, H69K, L89I	CRF01_AE
	NTHvr181	NTHvr181	AY238216	None			G16E, E35D, M36I, R41K, L63C, H69K, L89IM	CRF01_AE
	NTHvr182	NTHvr182	AY238217	None			G16E, E35D, M36I, R41K, L63C, H69K, L89M	CRF01_AE
	NTHvr183	NTHvr183	AY238218	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	NTHvr185	NTHvr185	AY238220	None			I13V, E35D, M36I, R41K, H69K, L89M, I93L	CRF01_AE
	NTHvr186	NTHvr186	AY238284	None			G16E, E35D, M36I, R41K, L63C, H69K, L89M	CRF01_AE
	NTHvr187	NTHvr187	AY238285	None			G16E, E35D, M36I, R41K, L63C, H69K, L89M	CRF01_AE
	NTHvr188	NTHvr188	AY238221	None			G16E, E35D, M36I, R41K, H69K, L89M, I93L	CRF01_AE
	NTHvr189	NTHvr189	AY238286	None			E35D, M36I, R41K, L63C, H69K, L89M	CRF01_AE
	NTHvr190	NTHvr190	AY238222	None			G16E, K20R, E35D, M36I, N37Y, R41K, L63C, H69K, L89M	CRF01_AE
	NTHvr191	NTHvr191	AY238223	None			I13IV, G16GA, E35D, M36I, P39PS, R41K, H69K, L89M	CRF01_AE
	NTHvr192	NTHvr192	AY238287	None			I13V, G16A, E35D, M36I, N37D, R41K, H69K, K70R, L89M	CRF01_AE
	NTHvr194	NTHvr194	AY238148	None			T12TS, I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	NTHvr197	NTHvr197	AY238289	None			G16E, E35D, M36I, R41K, G51E, L63C, H69K, L89M	CRF01_AE
	NTHvr198	NTHvr198	AY238290	None			I15V, E35D, M36I, R41K, H69K, L89M, I93L	CRF01_AE
	NTHvr20	NTHvr20	AY238168	None			I13V, L19M, E35D, M36I, R41K, L63C, H69K, L89M	CRF01_AE
	NTHvr200	NTHvr200	AY238224	None			G16E, K20KR, E35D, M36I, N37NY, R41K, L63C, H69K, L89M	CRF01_AE
	NTHvr21	NTHvr21	AY238169	None			I13V, G16E, E35D, M36I, N37ND, R41K, H69K, K70R, L89M	CRF01_AE
	NTHvr22	NTHvr22	AY238170	None			G16E, E35D, M36I, R41K, L63C, H69K, A71AD, G78GR, L89M	CRF01_AE
	NTHvr23	NTHvr23	AY238171	None			I13V, G16A, G27GV, E35D, M36I, N37D, R41K, H69K, K70R, L89M	CRF01_AE
	NTHvr24	NTHvr24	AY238172	None			I13IV, K20R, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	NTHvr25	NTHvr25	AY238173	None			I13IV, E35D, M36I, R41K, K45KR, H69K, L89M	CRF01_AE
	NTHvr26	NTHvr26	AY238174	None			G16E, E35D, M36I, R41K, L63C, H69K, L89M	CRF01_AE
	NTHvr28	NTHvr28	AY238175	None			G16E, E35D, M36I, R41K, L63C, H69K, L89M	CRF01_AE
	NTHvr29	NTHvr29	AY238176	None		V11VI	I13V, G16E, K20KR, E35D, M36I, R41K, K43R, R57K, H69K, K70R, L89M	CRF01_AE
	NTHvr3	NTHvr3	AY238157	None			I13V, E35D, M36I, R41K, L63C, H69K, L89M	CRF01_AE
	NTHvr36	NTHvr36	AY238178	None			G16E, E35D, M36I, R41K, Q61QH, L63C, H69K, L89M	CRF01_AE
	NTHvr38	NTHvr38	AY238185	None			G16E, E35D, M36I, R41K, L63C, H69K, T80TK, L89M, I93L	CRF01_AE
	NTHvr39	NTHvr39	AY238179	None			I13V, K14R, G16E, E35D, M36I, R41K, H69K, L89M, I93L	CRF01_AE
	NTHvr42	NTHvr42	AY238186	None			I13V, G16GA, E35D, M36I, N37ND, R41K, H69K, K70KR, L89M	CRF01_AE
	NTHvr43	NTHvr43	AY238149	None			I13V, K20R, E35D, M36I, R41K, K43R, L63C, H69K, L89M, C95V	CRF01_AE
	NTHvr44	NTHvr44	AY238150	None			K20R, E35D, M36I, R41K, H69K, L89M, I93L	CRF01_AE
	NTHvr45	NTHvr45	AY238187	None			G16E, L19R, E35D, M36I, R41K, L63C, H69K, L89M, I93L	CRF01_AE
	NTHvr46	NTHvr46	AY238188	None			I13V, G16E, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	NTHvr47	NTHvr47	AY238189	None			I13V, E35D, M36I, R41K, L63C, H69K, L89M	CRF01_AE
	NTHvr48	NTHvr48	AY238190	None			I13V, E35D, M36I, R41K, L63C, H69K, L89M	CRF01_AE
	NTHvr49	NTHvr49	AY238191	None			G16E, E35D, M36I, R41K, L63C, H69K, L89M	CRF01_AE
	NTHvr50	NTHvr50	AY238192	None			I13V, G16E, K20R, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	NTHvr51	NTHvr51	AY238193	None			G16E, E35D, M36I, R41K, L63C, H69K, L89M, Q92QK	CRF01_AE
	NTHvr52	NTHvr52	AY238194	None			G16A, K20KR, E35D, M36I, N37D, R41K, H69K, K70R, L89M, I93L	CRF01_AE
	NTHvr53	NTHvr53	AY238151	None		L33F	E35D, M36I, R41K, H69K, L89M, I93L	CRF01_AE
	NTHvr55	NTHvr55	AY238152	None			I13IV, G16E, E35D, M36I, R41K, K43KR, L63C, H69K, K70R, I72IT, L89M	CRF01_AE
	NTHvr56	NTHvr56	AY238153	None			L10LI, G16E, E35D, M36I, R41K, L63C, H69K, L89M	CRF01_AE
	NTHvr57	NTHvr57	AY238195	None			I13V, G16E, K20R, E35D, M36I, R41K, L63CR, H69K, L89M	CRF01_AE
	NTHvr58	NTHvr58	AY238154	None			I13V, K14R, I15V, G16E, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	NTHvr59	NTHvr59	AY238196	None			T12TA, I13V, G16A, E35D, M36I, N37D, R41K, H69K, K70R, L89M	CRF01_AE
	NTHvr6	NTHvr6	AY238158	None			G16E, E35D, M36I, R41K, L63C, H69KT, V75VI, L89M	CRF01_AE
	NTHvr60	NTHvr60	AY238197	None			I13V, G16A, E35D, M36I, N37D, R41K, H69K, K70R, L89M	CRF01_AE
	NTHvr61	NTHvr61	AY238198	None			G16E, E35D, M36I, R41K, L63C, H69K, L89M	CRF01_AE
	NTHvr62	NTHvr62	AY238199	None			G16E, E35D, M36I, R41K, L63C, H69K, L89M	CRF01_AE
	NTHvr63	NTHvr63	AY238155	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	NTHvr64	NTHvr64	AY238156	None			G16A, E35D, M36I, N37D, R41K, H69K, K70R, L89M	CRF01_AE
	NTHvr66	NTHvr66	AY238180	None		V11VI	I13V, E35D, M36I, R41K, L63C, H69K, L89M	CRF01_AE
	NTHvr67	NTHvr67	AY238200	None			I13IV, T31TI, E35D, M36I, R41K, H69K, L89M, I93L	CRF01_AE
	NTHvr68	NTHvr68	AY238201	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	NTHvr69	NTHvr69	AY238181	None			I13V, Q18QR, E35D, M36I, R41K, H69K, V77VL, L89M	CRF01_AE
	NTHvr7	NTHvr7	AY238159	None			I13V, E35D, M36I, N37D, R41K, H69K, K70R, L89M	CRF01_AE
	NTHvr70	NTHvr70	AY238182	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	NTHvr71	NTHvr71	AY238183	None			I13V, G16A, E35D, M36I, N37D, R41K, L63P, H69K, K70R, L89M	CRF01_AE
	NTHvr74	NTHvr74	AY238314	None			L10LP, G16E, L19LM, E35D, M36I, R41K, L63LV, H69K, P79PH, N83NY, L89M, I93L	CRF01_AE
	NTHvr75	NTHvr75	AY238315	None			I13IV, E35D, M36I, R41K, L63LP, H69K, V77I, V82I, L89M, I93L	CRF01_AE
	NTHvr76	NTHvr76	AY238292	None			G16E, E35D, M36I, R41K, R57K, L63C, H69K, L89M	CRF01_AE
	NTHvr77	NTHvr77	AY238293	None			I13V, E35D, M36I, R41K, K55E, R57K, Q61QH, H69K, L89M	CRF01_AE
	NTHvr78	NTHvr78	AY238294	None			I13V, G16E, E35D, M36I, R41K, L63X, H69K, L89M	CRF01_AE
	NTHvr79	NTHvr79	AY238295	None			I13V, G16A, E35D, M36I, N37D, R41K, H69K, K70R, L89M	CRF01_AE
	NTHvr8	NTHvr8	AY238160	None			I13V, E35D, M36I, R41K, L63S, H69K, L89M	CRF01_AE
	NTHvr80	NTHvr80	AY238296	None			T12P, I13V, G16E, K20R, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	NTHvr84	NTHvr84	AY238297	None			I13V, E35D, M36I, R41K, H69K, K70R, L89M	CRF01_AE
	NTHvr85	NTHvr85	AY238298	None			I13V, G16GE, E35D, M36I, R41K, H69K, K70KR, L89M	CRF01_AE
	NTHvr86	NTHvr86	AY238299	None			I13V, G16A, E35D, M36I, N37D, R41K, H69K, K70KR, L89M	CRF01_AE
	NTHvr87	NTHvr87	AY238300	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	NTHvr89	NTHvr89	AY238302	None			I13V, G16A, E35D, M36I, N37D, R41K, R57RK, H69K, K70R, L89M	CRF01_AE
	NTHvr90	NTHvr90	AY238303	None			G16E, E35D, M36I, R41K, K43R, I62IM, L63C, H69K, L89M	CRF01_AE
	NTHvr91	NTHvr91	AY238304	None			I13IV, G16GE, K20R, E35D, M36I, R41K, K43R, H69K, L89M	CRF01_AE
	NTHvr93	NTHvr93	AY238305	None			I15IV, G16E, E35D, M36I, P39S, R41K, L63C, H69K, N83Y, L89M	CRF01_AE
	NTHvr94	NTHvr94	AY238306	None			I13IV, K14KR, G16GE, E35D, M36I, R41K, H69K, K70KR, L89M	CRF01_AE
	NTHvr95	NTHvr95	AY238307	None			D25E, E35D, M36I, N37H, R41K, L63C, H69K, L89M, I93IL	CRF01_AE
	NTHvr96	NTHvr96	AY238308	None			L10I, I13V, G16E, E35D, M36I, R41K, H69K, K70KR, L89M	CRF01_AE
	NTHvr97	NTHvr97	AY238309	None			I13V, G16E, E35D, M36I, H69K, K70R, L89M	CRF01_AE
	NTHvr98	NTHvr98	AY238310	None			G16E, E35D, M36I, R41K, L63A, H69K, L89M, I93L	CRF01_AE
	NTHvr99	NTHvr99	AY238311	None			G16E, L19LM, E35D, M36I, R41K, L63C, H69K, L89M	CRF01_AE
Maljkovic (2003)	MI_Pat13	01SE21427	AY165258	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	MI_Pat21	01SE22198	AY165279	None			T12P, I13V, E35D, M36I, R41K, R57RK, L63PS, H69K, L89M	CRF01_AE
	MI_Pat40	01SE22387	AY165276	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	MI_Pat43	00SE19889	AY165239	None			I13V, E35D, M36I, R41K, H69K, K70KR, L89M	CRF01_AE
	MI_Pat53	00SE19382	AY165184	None			I13V, I15V, E35D, M36V, R41K, R57K, H69K, L89M	CRF01_AE
	MI_Pat76	01SE21951	AY165265	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	MI_Pat77	00SE20182	AY165248	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
Ramos (2003)	1269 12_69	1269 12_69	AF490973	None			L10I, I13V, E35D, M36I, R41K, L63P, E65G, I93L	CRF01_AE
	TH9_95	TH9_95	AF490974	None			I13V, E35D, M36I, N37D, R41K, L63P, I93L	CRF01_AE
	TH1326	TH1326	AY082968	None			T12P, L19V, E35D, L63P, I64V, I93L	CRF01_AE
Tovanabutra (2003)	02TH_OUR1331	02_1331	AF529572	None		L33I	I13V, E35D, M36I, R41K, K43R, H69K, T74S, L89M	CRF01_AE
	02TH_OUR1332	02_1332	AF529573	None			I13V, I15V, E35D, M36I, R41K, R57K, H69K, I72V, L89I	CRF01_AE
	99TH_R2399	99TH_R2399	AF530576	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
Watanaveeradej (2003)	NP1809	NP1809	AY262830	None			I13V, E35D, M36I, R41K, R57K, H69K, K70R, L89M	CRF01_AE
Deshpande (2004)	in55	in55	AY515770	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
Eshleman (2004)	Thai201	Thai201	AY444221	None			I15IV, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	Thai203	Thai203	AY444222	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	Thai204	Thai204	AY444223	None			I13V, E35D, M36I, R41K, L63P, H69K, L89M	CRF01_AE
	Thai205	Thai205	AY444224	None			I13V, I15IV, K20R, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	Thai207	Thai207	AY444225	None			I13V, E35D, M36I, R41K, K43R, H69K, L89M	CRF01_AE
	Thai210	Thai210	AY444228	None			L19M, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	Thai211	Thai211	AY444229	None			I13V, E35D, M36I, R41K, R57K, H69K, L89M	CRF01_AE
Montes (2004)	MB_patRAI	01_RAI715	AJ577978	None			L10V, I13V, G16E, E35D, M36I, R41K, H69K, K70R, L89I	CRF01_AE
Snoeck (2004)	BE24	BE24		None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	BE30	BE30	AY900736	None			I13V, K20R, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	BE33	BE33		None			E35D, M36I, R41K, R57K, H69K, L89M	CRF01_AE
	BE46	BE46		None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	BE50	BE50	AY900751	None			T12A, I13V, I15V, E35D, M36I, R41K, H69K, V82I, L89M	CRF01_AE
	BE56	BE56	AY900755	None			I13V, E35D, M36I, R41K, H69K, K70R, L89M	CRF01_AE
Tovanabutra (2004)	01THOUR786I	01_786I	AY358036	None			E35D, M36I, R41K, L63S, H69K, L89M	CRF01_AE
	02THOUR737I	02_737I	AY358037	None			I13V, E35D, M36I, R41K, H69K, V82I, L89M	CRF01_AE
	01THOUR609I	01_609I	AY358040	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	01THOUR642I	01_642I	AY358041	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	99THOUR044I	99_044I	AY358042	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	99THOUR066I	99_066I	AY358043	None			L10V, I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	99THOUR098I	99_098I	AY358044	None			I13V, E35D, M36I, R41K, H69K, K70R, L89M	CRF01_AE
	99THOUR164I	99_164I	AY358045	None			I13V, E35D, M36I, R41K, L63P, H69K, K70R, L89M	CRF01_AE
	00THOUR201I	00_201I	AY358046	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	99THOUR202I	99_202I	AY358047	None			I13V, E35D, M36I, R41K, K45R, H69K, L89M	CRF01_AE
	01THOUR414I	01_414I	AY358050	None			L10V, I13V, E35D, M36I, R41K, R57K, H69K, L89M	CRF01_AE
	99THOUR422I	99_422I	AY358051	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	00THOUR595I	00_595I	AY358052	None			E35D, M36I, R41K, L63P, H69K, L89M, I93L	CRF01_AE
	01THOUR598I	01_598I	AY358053	None			L10I, I13V, E35D, M36I, R41K, W42*, G51R, H69K, L89M	CRF01_AE
	00THOUR661I	00_661I	AY358057	None			E35D, M36I, R41K, H69K, K70R, I72V, L89M	CRF01_AE
	01THOUR702I	01_702I	AY358059	None			I13V, E35D, M36I, R41K, R57K, C67Y, H69K, L89M	CRF01_AE
	00THOUR724I	00_724I	AY358060	None			K14R, E35D, M36I, R41K, R57K, H69K, L89M	CRF01_AE
	00THOUR746I	00_746I	AY358061	None			T12P, I13V, G16A, E35D, M36I, R41K, D60E, H69K, L89M	CRF01_AE
	00THOUR810I	00_810I	AY358063	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	01THOUR830I	01_830I	AY358064	None			I13V, I15V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	99THOUR008I	99_008I	AY358065	None			L10V, I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	00THOUR200I	00_200I	AY358066	None			I13V, E35D, M36I, R41K, K45R, H69K, L89M	CRF01_AE
	00THOUR721I	00_721I	AY358067	None			I13V, E35D, M36I, R41K, H69R, L89M	CRF01_AE
	02THOUR840I	02_840I	AY358070	None			I13V, E35D, M36I, R57K, L63Q, H69K, L89M	CRF01_AE
	01THOUR033I	01_033I	AY358071	None			E35D, M36I, R57K, H69K, V82I, I93L	CRF01_AE
Arien (2005)	VI2621	VI2621	DQ177215	None			I13V, E35D, M36I, R41K, H69K, K70R, L89M	CRF01_AE
Brown (2005)	BB_97TH_NP1695	97TH_1695	AY713419	None			I13V, K20R, E35D, M36I, R41K, R57K, H69K, L89M	CRF01_AE
	BB_97TH_NP1525	97TH_1525	AY713420	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	BB_96TH_NP1046	96TH_1046	AY713421	None			I13V, E35D, M36I, R41K, H69K, K70R, L89M	CRF01_AE
	BB_98TH_NP1251	98TH_1251	AY713422	None			E35D, M36I, R41K, H69K, L89M	CRF01_AE
	BB_99TH_NI1052	99TH_1052	AY713423	None			I13V, E35D, M36I, R41K, R57K, H69K, L89M	CRF01_AE
	BB_96TH_M02138	96TH_02138	AY713424	None			I13V, K20R, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	BB_90TH_CM244	90TH_CM244	AY713425	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	BB_96TH_NI1149	96TH_1149	AY713426	None			I13V, E35D, M36I, R41K, H69K, V77I, L89M, T91V	CRF01_AE
Grossman (2005)	26630	26630PR418		None			I13V, E35D, M36I, N37D, R41K, R57K, H69K, K70R, L89M, L97F, N98K	CRF01_AE
Hsu (2005)	LYH_AY870189	BAA161371	AY870189	None			L10M, E35D, M36I, R41K, C67H, H69K, L89M	CRF01_AE
	LYH_AY870190	BAA161372	AY870190	None			I13V, E35D, M36I, R41K, R57RK, H69K, L89M	CRF01_AE
	LYH_AY870191	BAA161374	AY870191	None			L10I, I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	LYH_AY870192	BAA161376	AY870192	None			L10I, I13V, E35D, M36I, R41K, R57RK, H69K, L89M	CRF01_AE
	LYH_AY870193	BAA161377	AY870193	None			L10I, I13V, K14R, E35D, M36I, N37D, R41K, L63C, H69K, L89M	CRF01_AE
	LYH_AY870194	BAA161378	AY870194	None			I13V, E35D, M36I, R41K, R57K, L63A, H69K, L89M	CRF01_AE
	LYH_AY870195	BAA161379	AY870195	None			T12I, G16E, K20R, E35D, M36I, R41K, R57K, H69K, L89M, I93L	CRF01_AE
	LYH_AY870196	BAA161380	AY870196	None			I13V, I15V, K20R, E35D, M36I, R41K, R57K, H69K, L89M	CRF01_AE
	LYH_AY870197	BAA161381	AY870197	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	LYH_AY870198	BAA161382	AY870198	None			I13V, E35D, M36I, D60E, H69K, L89M	CRF01_AE
	LYH_AY870199	BAA161383	AY870199	None			L10I, I13V, G16E, K20KR, E35D, M36I, N37NK, P39S, R41K, L63V, H69K, I72V, L89M	CRF01_AE
	LYH_AY870200	BAA161384	AY870200	None			I15V, E35D, M36I, R41K, R57RK, H69K, K70KR, V82I, L89M	CRF01_AE
	LYH_AY870201	BAA161385	AY870201	None			Q7QR, I13V, G16E, E35D, M36I, R41K, H69K, L89M, Q92K	CRF01_AE
	LYH_AY870202	BAA161386	AY870202	None			I13V, K20R, E35D, M36I, N37D, R41K, K45R, H69K, K70KR, L89M	CRF01_AE
	LYH_AY870203	BAA161388	AY870203	None			I13V, I15V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	LYH_AY870205	BAA161390	AY870205	None			I13V, G16GE, K20R, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	LYH_AY870206	BAA161392	AY870206	None			T12P, I13V, E35D, M36I, R41K, L63P, H69K, L89M	CRF01_AE
	LYH_AY870207	BAA161393	AY870207	None			I13IV, E35D, M36I, R57K, H69K, V82I, L89M	CRF01_AE
	LYH_AY870208	BAA161394	AY870208	None			I13V, I15V, E35D, M36I, R41K, L63P, H69K, L89M	CRF01_AE
	LYH_AY870209	BAA161395	AY870209	None			I13V, E35D, M36I, R57K, H69K, L89M, L97I	CRF01_AE
	LYH_AY870211	BAA161398	AY870211	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	LYH_AY870212	BAA161399	AY870212	None			I13V, L19I, E35D, M36I, P39S, R41K, Q61E, I62V, L63P, H69K, L89M	CRF01_AE
	LYH_AY870213	BAA161400	AY870213	None			I13V, I15V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	LYH_AY870214	BAA161401	AY870214	None			I13V, K14R, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	LYH_AY870215	BAA161402	AY870215	None			I13V, L19I, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	LYH_AY870216	BAA161404	AY870216	None			I13V, G16E, E35D, M36I, G40GE, R41K, Q61QE, H69K, K70KR, L89M, I93L	CRF01_AE
	LYH_AY870217	BAA161405	AY870217	None			I13V, I15IV, K20KR, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	LYH_AY870218	BAA161407	AY870218	None		L33F	I13V, G16E, E35D, M36I, R41K, L63S, H69K, K70R, L89I, I93L	CRF01_AE
	LYH_AY870219	BAA161408	AY870219	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	LYH_AY870221	BAA161410	AY870221	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	LYH_AY870222	BAA161412	AY870222	None			I15V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	LYH_AY870223	BAA161413	AY870223	None			I13V, I15V, E35D, M36I, R41K, R57K, H69K, L89M	CRF01_AE
	BAA148360	BAA148360	AY870145	None			G16A, E35D, M36I, R41K, L63P, H69K, I72V, L89M, I93L	CRF01_AE
	BAA148361	BAA148361	AY870146	None			L10V, I13V, G16E, E35D, M36I, R41K, H69K, K70KR, I72V, L89M	CRF01_AE
	BAA148364	BAA148364	AY870149	None			K14R, G16E, E35D, M36I, R41K, H69K, L89M, I93L	CRF01_AE
	BAA150606	BAA150606	AY870151	None			I13V, E35D, M36I, R41K, H69K, V82I, L89M	CRF01_AE
	BAA150609	BAA150609	AY870153	None			I13V, E35D, M36I, R41K, L63P, H69K, L89M	CRF01_AE
	BAA150613	BAA150613	AY870154	None			I13V, G16E, E35D, M36I, R41K, H69K, V82I, L89I	CRF01_AE
	BAA150616	BAA150616	AY870155	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	BAA150620	BAA150620	AY870157	None			I13V, G16E, E35D, M36I, R41K, L63P, H69K, L89M, I93L	CRF01_AE
	BAA154759	BAA154759	AY870161	None		L33LF	I13LV, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	BAA154763	BAA154763	AY870164	None			I13V, I15V, E35D, M36I, R41K, H69K, V82I, L89M	CRF01_AE
	BAA154764	BAA154764	AY870165	None			I13V, I15V, G16E, E35D, M36I, R41K, H69K, K70R, L89M	CRF01_AE
	BAA154768	BAA154768	AY870166	None			L10V, I13V, E35D, M36I, R41K, R57RK, H69K, L89M	CRF01_AE
	BAA154769	BAA154769	AY870167	None			I13V, E35D, M36I, R41K, H69K, K70R, L89M	CRF01_AE
	BAA157664	BAA157664	AY870171	None			I13V, I15IV, E35D, M36I, R41K, R57K, H69K, L89M	CRF01_AE
	BAA157666	BAA157666	AY870172	None		L89V	I13V, K20I, E35D, M36I, R41K, H69K	CRF01_AE
	BAA157667	BAA157667	AY870173	None			L10I, I13V, E35D, M36I, R41K, K55KR, L63P, H69K, L89M, I93V	CRF01_AE
	BAA157668	BAA157668	AY870174	None			L10LV, I13V, K14KR, I15V, E35D, M36I, R41K, L63T, H69K, L89M	CRF01_AE
	BAA157670	BAA157670	AY870175	None			I13V, E35D, M36I, R41K, H69K, V82VI, L89M	CRF01_AE
	BAA157671	BAA157671	AY870176	None			I13V, K14R, I15V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	BAA157672	BAA157672	AY870177	None			E35D, M36I, R41K, H69K, K70R, L89M	CRF01_AE
	BAA157673	BAA157673	AY870178	None			I13V, E35D, M36I, N37NT, R41K, H69K, L89M	CRF01_AE
	BAA157676	BAA157676	AY870181	None			L10I, I13V, E35D, M36I, N37D, R41K, L63S, H69K, K70R, L89M	CRF01_AE
	BAA157677	BAA157677	AY870182	None			I13V, I15V, E35D, M36I, R41K, R57K, H69K, V77I, L89I, T91V	CRF01_AE
	BAA157680	BAA157680	AY870185	None			I13V, E35D, M36I, R41K, K43KR, H69K, V82I, L89M	CRF01_AE
	BAA157681	BAA157681	AY870186	None			L10I, I13IV, G16GE, K20M, E35D, M36I, R41K, H69K, L89I	CRF01_AE
	BAA157684	BAA157684	AY870188	None			L10I, I13V, G16GE, E35D, M36I, R41K, H69K, L89M, L97I	CRF01_AE
	BAA161414	BAA161414	AY870224	None			I13V, I15V, E35D, M36I, R41K, L63P, H69K, V82I, L89M, I93L	CRF01_AE
	BAA161420	BAA161420	AY870227	None			I13V, E35D, M36I, R41K, Q61QE, H69K, L89M	CRF01_AE
	BAA161440	BAA161440	AY870236	None			I13V, I15V, E35D, M36I, R41K, D60E, H69K, L89M, I93L	CRF01_AE
	BAA161443	BAA161443	AY870237	None			E35D, M36I, R41K, I62IV, L63LFPS, H69K, T74TI, L89M	CRF01_AE
	BAA161446	BAA161446	AY870239	None			I13V, G16A, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	BAA161447	BAA161447	AY870240	None			I13V, K14R, E35D, M36I, R41K, H69K, V82I, L89M	CRF01_AE
	BAA161451	BAA161451	AY870244	None			I13V, K14R, I15V, E35D, M36I, N37D, R41K, H69K, L89M	CRF01_AE
Laeyendecker (2005)	Pingxiang-17	P17	AY635694	None			I13V, E35D, M36I, R41K, I64IL, H69K, L89M	CRF01_AE
	Pingxiang-56	P56	AY635696	None			E35D, M36I, R41K, I64IL, H69K, K70R, L89M	CRF01_AE
	Pingxiang-61	P61	AY635697	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	Pingxiang-81	P81	AY635698	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	Pingxiang-90	P90	AY635699	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	Pingxiang-94	P94	AY635700	None			I13V, E35D, M36I, R41K, I64IL, H69K, L89M	CRF01_AE
	Pingxiang-104	P104	AY635701	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	Pingxiang-116	P116	AY635703	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	Pingxiang-124	P124	AY635706	None			I13V, E34E*, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	Pingxiang-126	P126	AY635707	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	Pingxiang-127	P127	AY635708	None			I13V, E35D, M36I, R41K, K45P, H69K, L89M	CRF01_AE
	Pingxiang-187	P187	AY635710	None			T12A, I13V, G16E, E34*, E35D, M36I, R41K, K55M, H69K, L89M, I93L	CRF01_AE
	Pingxiang-264	P264	AY635713	None			T12TA, I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	Pingxiang-269	P269	AY635714	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	Pingxiang-270	P270	AY635715	None			I13V, E35D, M36I, R41K, K45KPQT, H69K, L89M	CRF01_AE
	Pingxiang-291	P291	AY635716	None			I13V, G16E, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	Pingxiang-302	P302	AY635717	None			I13V, E35D, M36I, R41K, H69K, K70R, L89M	CRF01_AE
	Pingxiang-311	P311	AY635718	None			I13V, G16E, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	Binyang-527	B527	AY635742	None			I13V, E35D, M36I, R41K, H69R, L89M, I93L	CRF01_AE
	Binyang-528	B528	AY635743	None			I13V, E34E*, E35D, M36I, R41K, H69R, L89M, I93L	CRF01_AE
Ly (2005)	NL_KHM_CA10	KHM_CA10	DQ013521	None			E35D, M36I, R41K, H69K, L89M	CRF01_AE
	NL_KHM_CA12	KHM_CA12	DQ013522	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	NL_KHM_CA13	KHM_CA13	DQ013523	None			I15V, G16A, E35D, M36I, R41K, H69K, L89M, I93L	CRF01_AE
	NL_KHM_CA14	KHM_CA14	DQ013524	None			I13V, I15V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	NL_KHM_CA1	KHM_CA1	DQ013514	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	NL_KHM_CA20	KHM_CA20	DQ013528	None			I13V, E35D, M36I, N37D, R41K, L63P, H69K, L89M	CRF01_AE
	NL_KHM_CA21	KHM_CA21	DQ013529	None			I13V, E35D, M36I, R41K, L63C, H69K, L89M	CRF01_AE
	NL_KHM_CA23	KHM_CA23	DQ013531	None			I13V, G16E, E35D, M36I, R41K, H69K, K70R, L89M	CRF01_AE
	NL_KHM_CA24	KHM_CA24	DQ013532	None			I13V, G16E, E35D, M36I, R41K, H69K, K70R, L89IM	CRF01_AE
	NL_KHM_CA26	KHM_CA26	DQ013533	None			E35D, M36I, R41K, L63P, H69K, K70R, L89M	CRF01_AE
	NL_KHM_CA27	KHM_CA27	DQ013534	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	NL_KHM_CA28	KHM_CA28	DQ013535	None			I13V, K14R, I15V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	NL_KHM_CA2	KHM_CA2	DQ013515	None			T12A, E35D, M36I, R41K, H69K, L89M, I93L	CRF01_AE
	NL_KHM_CA30	KHM_CA30	DQ013537	None			E35D, M36I, R41K, L63C, H69K, L89M	CRF01_AE
	NL_KHM_CA32	KHM_CA32	DQ013539	None			I13V, E35D, M36I, R41K, R57K, L63PS, H69K, K70R, L89M	CRF01_AE
	NL_KHM_CA35	KHM_CA35	DQ013542	None			I13V, E35D, M36I, R41K, H69K, L89I	CRF01_AE
	NL_KHM_CA36	KHM_CA36	DQ013543	None			I13V, E35D, M36I, R41K, L63C, H69K, L89M	CRF01_AE
	NL_KHM_CA37	KHM_CA37	DQ013544	None			I13V, K20R, E35D, M36I, R41K, L63C, H69K, L89M	CRF01_AE
	NL_KHM_CA39	KHM_CA39	DQ013545	None			E35D, M36I, R41K, L63C, H69K, L89M	CRF01_AE
	NL_KHM_CA40	KHM_CA40	DQ013546	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	NL_KHM_CA41	KHM_CA41	DQ013547	None			T12A, E35D, M36I, R41K, R57K, H69K, L89M	CRF01_AE
	NL_KHM_CA43	KHM_CA43	DQ013549	None			I13V, G16E, K20R, E35D, M36I, R41K, H69K, L89M, Q92K	CRF01_AE
	NL_KHM_CA44	KHM_CA44	DQ013550	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	NL_KHM_CA45	KHM_CA45	DQ013551	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	NL_KHM_CA46	KHM_CA46	DQ013552	None			I13V, G16E, L19M, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	NL_KHM_CA47	KHM_CA47	DQ013553	None			E35D, M36I, R41K, H69K, L89M	CRF01_AE
	NL_KHM_CA48	KHM_CA48	DQ013554	None			I13V, L24V, E35D, M36I, R41K, L63C, H69K, L89M	CRF01_AE
	NL_KHM_CA49	KHM_CA49	DQ013555	None		L33F	I13V, K14E, E35D, M36I, R41K, H69K, L89M, I93IF	CRF01_AE
	NL_KHM_CA4	KHM_CA4	DQ013516	None			I13V, G16E, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	NL_KHM_CA50	KHM_CA50	DQ013556	None			I13V, I15IV, E35D, M36I, R41K, L63FS, H69K, L89M	CRF01_AE
	NL_KHM_CA51	KHM_CA51	DQ013557	None			K20R, E35D, M36I, R41K, L63C, H69K, K70R, L89M	CRF01_AE
	NL_KHM_CA52	KHM_CA52	DQ013558	None			I13V, G16E, K20I, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	NL_KHM_CA53	KHM_CA53	DQ013559	None			I13V, G16A, E35D, M36I, R41K, R57K, H69K, K70R, L89M	CRF01_AE
	NL_KHM_CA54	KHM_CA54	DQ013560	None			K20R, E35D, M36I, N37D, I62V, L63S, H69K, L89M	CRF01_AE
	NL_KHM_CA55	KHM_CA55	DQ013561	None			I13V, E35D, M36I, R41K, L63P, H69K, L89M	CRF01_AE
	NL_KHM_CA56	KHM_CA56	DQ013562	None			L10V, I13V, E35D, M36I, R41K, H69K, K70R, L89M	CRF01_AE
	NL_KHM_CA57	KHM_CA57	DQ013563	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	NL_KHM_CA58	KHM_CA58	DQ013564	None			I13V, E35D, M36I, N37K, R41N, H69K, L89M	CRF01_AE
	NL_KHM_CA5	KHM_CA5	DQ013517	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	NL_KHM_CA60	KHM_CA60	DQ013566	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	NL_KHM_CA61	KHM_CA61	DQ013567	None			I13IV, E35D, M36I, R41K, L63C, H69K, K70KR, L89M	CRF01_AE
	NL_KHM_CA62	KHM_CA62	DQ013568	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	NL_KHM_CA6	KHM_CA6	DQ013518	None			E35D, M36I, R41K, L63P, H69K, L89M, I93L	CRF01_AE
	NL_KHM_CA8	KHM_CA8	DQ013519	None			I13V, E35D, M36I, R41K, L63C, H69K, L89M	CRF01_AE
	NL_KHM_CA9	KHM_CA9	DQ013520	None			I13V, E35D, M36I, R41K, K45R, H69K, L89M	CRF01_AE
	NL_KHM_CD10	KHM_CD10	DQ013640	None			E35D, M36I, R41K, Q61QE, H69K, L89M	CRF01_AE
	NL_KHM_CD11	KHM_CD11	DQ013641	None			I13V, E35D, M36I, R41K, L63T, H69K, L89M	CRF01_AE
	NL_KHM_CD12	KHM_CD12	DQ013642	None			L10I, I13V, E35D, M36I, R41K, R57K, L63S, H69K, L89M	CRF01_AE
	NL_KHM_CD13	KHM_CD13	DQ013643	None			I13V, E35D, M36I, R41K, K45KR, L63P, H69K, P79PH	CRF01_AE
	NL_KHM_CD15	KHM_CD15	DQ013645	None			E35D, M36I, R41K, H69K, T74S, L89M, I93L	CRF01_AE
	NL_KHM_CD16	KHM_CD16	DQ013646	None			I13V, G16E, E35D, M36I, R41K, R57K, H69K, L89M	CRF01_AE
	NL_KHM_CD17	KHM_CD17	DQ013647	None			E35D, M36I, R41K, H69K, L89M	CRF01_AE
	NL_KHM_CD18	KHM_CD18	DQ013648	None			I13V, I15V, E35D, M36I, R41K, L63P, H69K, K70R, L89M	CRF01_AE
	NL_KHM_CD1	KHM_CD1	DQ013631	None			I13V, K14R, I15V, E35D, M36I, N37D, R41K, H69K, L89M	CRF01_AE
	NL_KHM_CD21	KHM_CD21	DQ013651	None			L10I, I13V, I15V, G16E, E35D, M36I, R41K, H69K, K70R, I72V, L89IM	CRF01_AE
	NL_KHM_CD2	KHM_CD2	DQ013632	None			I13V, E35D, M36I, R41K, H69K, L89M, I93IL, L97I	CRF01_AE
	NL_KHM_CD4	KHM_CD4	DQ013634	None			I13V, E35D, M36I, R41K, H69K, K70R, L89M	CRF01_AE
	NL_KHM_CD5	KHM_CD5	DQ013635	None			I13V, E35D, M36I, R41K, H69K, K70R, L89M	CRF01_AE
	NL_KHM_CD6	KHM_CD6	DQ013636	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	NL_KHM_CD8	KHM_CD8	DQ013638	None			I13V, E35D, M36I, R41K, L63V, H69K, L89M	CRF01_AE
	NL_KHM_CD9	KHM_CD9	DQ013639	None			E35D, M36I, R41K, L63C, H69K, L89M	CRF01_AE
	NL_KHM_HM11	KHM_HM11	DQ013578	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	NL_KHM_HM13	KHM_HM13	DQ013579	None			I13V, E35D, M36I, R41K, L63C, H69K, L89M	CRF01_AE
	NL_KHM_HM14	KHM_HM14	DQ013580	None			L10V, I13V, G16E, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	NL_KHM_HM15	KHM_HM15	DQ013581	None			L10I, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	NL_KHM_HM16	KHM_HM16	DQ013582	None			I13V, G16E, K20R, E35D, M36I, N37D, R41K, H69K, L89M	CRF01_AE
	NL_KHM_HM17	KHM_HM17	DQ013583	None			I13V, G16E, E35D, M36I, R41K, H69K, K70R, L89M	CRF01_AE
	NL_KHM_HM18	KHM_HM18	DQ013584	None			I13V, I15V, E35D, M36I, R41K, L63C, H69K, L89M	CRF01_AE
	NL_KHM_HM19	KHM_HM19	DQ013585	None			I13V, G17A, E35D, M36I, R41K, K45R, R57K, H69K, L89M	CRF01_AE
	NL_KHM_HM1	KHM_HM1	DQ013570	None			I13V, E35D, M36I, R41K, H69K, K70R, L89M	CRF01_AE
	NL_KHM_HM21	KHM_HM21	DQ013587	None			I13V, K20I, E35D, M36I, P39PS, R41K, H69K, L89M	CRF01_AE
	NL_KHM_HM22	KHM_HM22	DQ013588	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	NL_KHM_HM23	KHM_HM23	DQ013589	None			I13V, L19W, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	NL_KHM_HM24	KHM_HM24	DQ013590	None			T12TA, I15V, K20R, E35D, M36I, R41K, Q61E, H69K, L89M, I93L	CRF01_AE
	NL_KHM_HM26	KHM_HM26	DQ013592	None			I13V, G16GE, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	NL_KHM_HM27	KHM_HM27	DQ013593	None			I13V, E35D, M36I, R41K, L63IV, H69K, L89M	CRF01_AE
	NL_KHM_HM29	KHM_HM29	DQ013594	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	NL_KHM_HM30	KHM_HM30	DQ013595	None			E35D, M36I, R41K, I62V, H69K, L89M	CRF01_AE
	NL_KHM_HM32	KHM_HM32	DQ013596	None			L10I, I13V, G16E, E35D, M36I, R41K, H69K, K70R, I72V, L89M	CRF01_AE
	NL_KHM_HM33	KHM_HM33	DQ013597	None			I13V, E35D, M36I, R41K, R57K, D60E, H69K, L89M	CRF01_AE
	NL_KHM_HM34	KHM_HM34	DQ013598	None			I13V, I15V, E35D, M36I, R41K, R57K, H69K, K70R, L89M	CRF01_AE
	NL_KHM_HM35	KHM_HM35	DQ013599	None			I13V, E35D, M36I, R41K, D60E, H69K, V77I, L89M, I93L	CRF01_AE
	NL_KHM_HM36	KHM_HM36	DQ013600	None			I13V, G16E, K20R, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	NL_KHM_HM3	KHM_HM3	DQ013571	None			L10LI, I13V, G16E, E35D, M36I, R41K, L63C, H69K, L89M	CRF01_AE
	NL_KHM_HM7	KHM_HM7	DQ013574	None			K20R, E35D, M36I, R41K, L63C, H69K, L89M, I93L	CRF01_AE
	NL_KHM_HM8	KHM_HM8	DQ013575	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	NL_KHM_HM9	KHM_HM9	DQ013576	None			T12P, E35D, M36I, R41K, I62V, C67S, H69K, L89M	CRF01_AE
	NL_KHM_POP1	KHM_POP1	DQ013601	None			I13V, L33V, E35D, M36I, R41K, H69K, K70R, L89M	CRF01_AE
	NL_KHM_POP2	KHM_POP2	DQ013602	None			I13V, G16E, E35D, M36I, R41K, D60E, I62V, L63M, I64L, H69K, L89M	CRF01_AE
	NL_KHM_POP3	KHM_POP3	DQ013603	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	NL_KHM_POP4	KHM_POP4	DQ013604	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	NL_KHM_POP5	KHM_POP5	DQ013605	None			T12P, I13V, G16GE, E35D, M36I, R41K, L63H, H69K, K70Q, L89I	CRF01_AE
	NL_KHM_POP6	KHM_POP6	DQ013606	None			I13V, E35D, M36I, R41K, R57K, L63P, H69K, I72T, L89M	CRF01_AE
	NL_KHM_POP8	KHM_POP8	DQ013608	None			L19M, E35D, M36I, R41K, H69K, V75I, L89M	CRF01_AE
	NL_KHM_POP9	KHM_POP9	DQ013609	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	NL_KHM_SOS10	KHM_SOS10	DQ013619	None			I13V, E35D, M36I, R41K, Q61QE, H69K, L89M	CRF01_AE
	NL_KHM_SOS11	KHM_SOS11	DQ013620	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	NL_KHM_SOS12	KHM_SOS12	DQ013621	None			I13V, E35D, M36I, R41K, L63C, H69K, L89M	CRF01_AE
	NL_KHM_SOS13	KHM_SOS13	DQ013622	None			I13V, E35D, M36I, R41K, K45R, H69K, L89M	CRF01_AE
	NL_KHM_SOS14	KHM_SOS14	DQ013623	None			I13V, G16E, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	NL_KHM_SOS17	KHM_SOS17	DQ013625	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	NL_KHM_SOS1	KHM_SOS1	DQ013610	None			I13V, E35D, M36I, R41K, R57K, H69K, K70R, L89M	CRF01_AE
	NL_KHM_SOS20	KHM_SOS20	DQ013627	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	NL_KHM_SOS21	KHM_SOS21	DQ013628	None			I13V, E35D, M36I, R41K, R57K, L63A, H69K, L89M	CRF01_AE
	NL_KHM_SOS22	KHM_SOS22	DQ013629	None			I13V, L33V, E35D, M36I, R41K, K45R, H69K, L89M	CRF01_AE
	NL_KHM_SOS23	KHM_SOS23	DQ013630	None			I13V, E35D, M36I, R41K, K45R, L63S, H69K, L89M	CRF01_AE
	NL_KHM_SOS2	KHM_SOS2	DQ013611	None			I13V, G16E, E35D, M36I, R41K, R57K, H69K, L89M	CRF01_AE
	NL_KHM_SOS4	KHM_SOS4	DQ013613	None			I13V, I15V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	NL_KHM_SOS5	KHM_SOS5	DQ013614	None			I13V, G16E, K20KR, E35D, M36I, R41K, L63C, H69K, K70R, L89M	CRF01_AE
	NL_KHM_SOS6	KHM_SOS6	DQ013615	None			I15V, G16E, K20R, E35D, M36I, R41K, H69K, L89M, I93L	CRF01_AE
	NL_KHM_SOS7	KHM_SOS7	DQ013616	None			I13V, E35D, M36I, R41K, L63C, H69K, V82I, L89M	CRF01_AE
	NL_KHM_SOS8	KHM_SOS8	DQ013617	None			I13V, L33V, E35D, M36I, R41K, H69K, K70R, L89M	CRF01_AE
	NL_KHM_SOS9	KHM_SOS9	DQ013618	None			I13V, E35D, M36I, R41K, L63C, H69K, L89M	CRF01_AE
Non-B Workgroup (2005)	UK1573	UK1573		None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	TH_154	TH_154	AY605566	None			I13V, E35D, M36I, R41K, K45R, H69K, L89M	CRF01_AE
	TH_189	TH_189	AY605594	None			I13V, I15V, E35D, M36I, R41K, L63S, H69K, V82I, L89M	CRF01_AE
	TH_219	TH_219	AY605622	None			L10I, I13V, E35D, M36I, R41K, L63I, H69K, V82I, L89M	CRF01_AE
	UK2039	UK2039	AY900846	None			L10I, I13V, K14R, G16E, E35D, M36I, R41K, L63HN, H69Q, L89M	CRF01_AE
	TK1013	TK1013		None			I13V, E35D, M36I, R41K, H69K, K70R, L89M	CRF01_AE
	TK3012	TK3012		None			E35D, M36I, R41K, I62V, L63H, H69K, L89M	CRF01_AE
Tee (2005)	04MYKL1816	04_1816	AY904604	None			L10V, I13V, I15V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	03MYKL1316	03_1316	AY904519	None			L10V, I13V, G16E, K20R, E35D, M36I, R41K, R57K, H69K, K70R, L89M	CRF01_AE
	04MYKLGun7073	04Gun7073	AY904602	None			L10V, I13V, G16E, E35D, M36I, R41K, H69K, K70R, L89M	CRF01_AE
	03MYKL1425	03_1425	AY904526	None			L10I, I13V, E35D, M36I, R41K, H69K, I72V, L89M	CRF01_AE
	03MYKL1353	03_1353	AY904531	None			I15V, G16E, E35D, M36V, R41K, L63T, H69K, K70R, L89M	CRF01_AE
	03MYKL1354	03_1354	AY904532	None			L10I, K20R, E35D, M36I, R41K, L63T, H69K, L89M, T91N	CRF01_AE
	03MYKL1533	03_1533	AY904592	None			I13V, G16E, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	04MYKL1897	04_1897	AY904609	None			I13V, E35D, M36I, R41K, L63P, H69T, K70R, A71V, I72V, V77I, I93L	CRF01_AE
	03MYKL1358	03_1358	AY904534	None			I13V, E35D, M36I, R41K, H69K, V77I, L89M, T91N	CRF01_AE
	04MYKLBD9039	04BD9039	AY904577	None			I13V, E35D, M36I, R41K, R57K, H69K, L89M	CRF01_AE
	03MYKL1397	03_1397	AY904537	None			I13V, L19M, E35D, M36I, R41K, H69K, L89M, T91N	CRF01_AE
	03MYKL1579	03_1579	AY904566	None			E35D, M36I, R41K, H69K, L89M, I93L	CRF01_AE
	04MYKL1717	04_1717	AY904579	None			I13V, E35D, M36I, R41K, R57K, H69K, L89M	CRF01_AE
	04MYKL1756	04_1756	AY904595	None			I15V, K20R, E35D, M36I, R41K, L63P, H69K, L89M, I93L	CRF01_AE
	04MYKL1864	04_1864	AY904613	None		L10F	I13V, G16E, E35D, M36I, R41K, L63P, H69K, K70R, L89M	CRF01_AE
	03MYKL1430	03_1430	AY904541	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	03MYKL1503	03_1503	AY904548	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	03MYKL1504	03_1504	AY904551	None			I13V, E35D, M36I, R41K, R57K, H69K, L89M	CRF01_AE
	03MYKL1328	03_1328	AY904529	None			I13V, L19M, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	03MYKL1362	03_1362	AY904535	None			L10V, I13V, G16E, E35D, M36I, R41K, L63V, H69K, K70R, L89M	CRF01_AE
	04MYKL1798	04_1798	AY904598	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	04MYKL1799	04_1799	AY904591	None			I13V, G16E, E35D, M36I, R41K, I62V, H69K, K70R, L89M	CRF01_AE
	04MYKLLSW3950	04LSW3950	AY904607	None			T12A, I13V, E35D, M36I, R41K, L63S, H69K, L89M	CRF01_AE
	04MYKL1610	04_1610	AY904563	None			L10I, I13V, G16E, K20R, E35D, M36I, L38F, R41K, H69K, K70R, I72V, L89M	CRF01_AE
	03MYKL1546	03_1546	AY904557	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	04MYKL1611	04_1611	AY904564	None			I13V, K14R, I15V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	03MYKL1547	03_1547	AY904558	None			I13V, E35D, M36I, N37D, R41K, H69K, L89M	CRF01_AE
	04MYKL1658	04_1658	AY904594	None			I13V, E35D, M36I, R41K, H69K, K70R, V82I, L89M	CRF01_AE
	03MYKL1401	03_1401	AY904524	None			E35D, M36I, R41K, I62V, L63P, H69K, L89M, I93L	CRF01_AE
	04MYKL1837	04_1837	AY904605	None			I13V, E35D, M36I, R41K, L63P, H69K, K70R, L89M	CRF01_AE
	04MYKL1768	04_1768	AY904588	None			L10V, I13V, G17E, E35D, M36I, R41K, K45R, H69K, L89M	CRF01_AE
	03MYKL1511	03_1511	AY904549	None			I13V, E35D, M36I, R41K, R57K, H69K, L89M	CRF01_AE
	03MYKL1335	03_1335	AY904520	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	03MYKL1336	03_1336	AY904521	None			L10I, I13V, T26S, E35D, M36I, R41K, L63S, H69K, L89M	CRF01_AE
	03MYKL1480	03_1480	AY904547	None			I13V, E35D, M36I, R41K, I62V, H69K, L89M	CRF01_AE
	03MYKLTW9787	03TW9787	AY904574	None			L10I, I13V, E35D, M36I, R41K, H69K, V82I, L89M	CRF01_AE
	03MYKL1555	03_1555	AY904560	None			I13V, K14R, E35D, M36I, R41K, H69K, V82I, L89M	CRF01_AE
	04MYKL1734	04_1734	AY904584	None			I13V, K14R, I15V, E35D, M36I, R41K, Q61D, H69K, L89M	CRF01_AE
	04MYKL1736	04_1736	AY904585	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	04MYKL1770	04_1770	AY904596	None			I13V, E35D, M36I, R41K, K45R, H69K, L89M, I93L	CRF01_AE
	04MYKLBD6117	04BD6117	AY904612	None			I13V, E35D, M36I, R41K, R57K, H69K, L89M	CRF01_AE
	04MYKL1668	04_1668	AY904570	None			I13V, E35D, M36I, R41K, R57K, H69K, L89M	CRF01_AE
	04MYKL1880	04_1880	AY904608	None		I47M	I13V, E35D, M36I, R41K, L63C, H69K, L89M	CRF01_AE
	04MYKL1881	04_1881	AY904614	None			I13V, E35D, M36I, R41K, K43N, H69K, L89M	CRF01_AE
	03MYKL1520	03_1520	AY904552	None			I13V, I15V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	03MYKL1521	03_1521	AY904553	None			I13V, K20R, E35D, M36I, R41K, H69K, V77I, L89M	CRF01_AE
	03MYKL1419	03_1419	AY904525	None			I13V, E35D, M36I, R41K, H69K, L89M, G94C	CRF01_AE
	04MYKLAmp4165	04Amp4165	AY904606	None			I13V, E35D, M36I, R41K, K55R, H69K, K70R, I72V, L89M	CRF01_AE
	03MYKL1349	03_1349	AY904530	None			I13V, K20R, E35D, M36I, R41K, H69K, V82I, L89M	CRF01_AE
	03MYKL1527	03_1527	AY904554	None			K20R, E35D, M36I, N37D, R41K, H69K, L89M	CRF01_AE
	03MYKL1383	03_1383	AY904536	None			I13V, K14R, K20R, E35D, M36I, R41K, R57K, H69K, L89M, T91N	CRF01_AE
	04MYKL1815	04_1815	AY904603	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
Tee (2005)	MYIDUB11	04MYIDUB11	DQ018354	None			I13V, E35D, M36I, R41K, D60E, L63I, C67CW, H69K, L89M	CRF01_AE
Tovanabutra (2005)	00US_MSC1164	00US_1164	AY444804	None			I13V, E35D, M36I, R41K, H69K, V82I, L89M	CRF01_AE
	98US_MSC1120	98US_1120	AY444803	None			I13V, I15V, K20R, E35D, M36I, R41K, H69K, P81L, L89M	CRF01_AE
	98US_MSC2008	98US_2008	AY444805	None			I13V, E35D, M36I, R41K, K45R, D60E, H69K, L89M	CRF01_AE
	98US_MSC3012	98US_3012	AY444806	None			E35D, M36I, R41K, H69K, L89M	CRF01_AE
Vazquez de Parga (2005)	RUJA42	RUJA42	EU345798	None			L10I, I13V, G16E, E35D, M36I, P39T, R41K, H69K, K70KR, L89M	CRF01_AE
Babic (2006)	DB_SI3493-03	SI3493-03	AJ971102	None			L10I, I13V, I15V, E35D, M36I, R41K, L63P, H69K, L89M, T91I	CRF01_AE
	DB_SI900-02	SI900-02	AJ971134	None			E35D, M36I, R41K, H69K, L89M, I93L	CRF01_AE
Huang (2006)	FJ051	FJ051	DQ859178	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	FJ054	FJ054	DQ859180	None			I13V, G16E, K20R, E35D, M36I, R41K, I62V, H69K, L89M	CRF01_AE
Jayaraman (2006)	1-00-0088	1-00-0088		None			Q2L, I13V, E35D, M36I, R41K, H69K, L89M, L90F	CRF01_AE
Lindstrom (2006)	SIIDC0282	SIIDC0282		None			I13IV, G17E, K20R, E35D, M36I, R41K, H69K, I72V, L89M, I93L	CRF01_AE
	SIIDC0288	SIIDC0288		None			I13V, E35D, M36I, R41K, L89M	CRF01_AE
Marechal (2006)	JF_005	JF_005	DQ443627	None			L10V, I13V, K14R, G16A, E35D, M36I, N37DE, R41K, R57K, D60E, Q61N, L63M, C67E, H69K, V77I, L89M	CRF01_AE
	JF_147	JF_147	DQ443716	None			E35D, M36I, R41K, L63S, H69K, L89M	CRF01_AE
Tee (2006)	MYKL1351	03MYKL1351	AY960924	None			I13V, K20R, E35D, M36I, R41K, H69K, L89M	CRF01_AE
		04MYKL1351.1	AY960960	None			I13V, K20R, E35D, M36I, R41K, I62V, H69K, L89M	CRF01_AE
	MYKL1352	03MYKL1352	AY960925	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	MYKL1356	03MYKL1356	AY960926	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	MYKL1392	03MYKL1392	AY960930	None			I13V, E35D, M36I, R41K, R57K, H69K, L89M	CRF01_AE
		03MYKL1392.1	AY960961	None			I13V, E35D, M36I, R41K, R57K, H69K, L89M	CRF01_AE
	MYKL1395	03MYKL1395	AY960931	None			L10I, I13V, G16E, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	MYKL1399	03MYKL1399	AY960932	None			L10I, I13V, I15V, E35D, M36I, R41K, R57K, H69K, L89M	CRF01_AE
		04MYKL1399.1	AY960967	None			I13V, I15V, E35D, M36I, R41K, R57K, H69K, L89M	CRF01_AE
		04MYKL1399.2	AY960968	None			L10I, I13V, I15V, E35D, M36I, R41K, R57K, H69K, L89M	CRF01_AE
	MYKL1402	03MYKL1402	AY960933	None			I13V, K20I, E35D, M36I, R41K, L63P, H69K, L89M	CRF01_AE
		04MYKL1402.1	AY960962	None			I13V, K20I, E35D, M36I, R41K, L63P, H69K, L89M	CRF01_AE
		04MYKL1402.2	AY960963	None			I13V, K20I, E35D, M36I, R41K, L63P, H69K, L89M	CRF01_AE
	MYKL1415	03MYKL1415	AY960935	None			I13V, E35D, M36I, R41K, L63P, H69K, L89M	CRF01_AE
	MYKL1439	03MYKL1439	AY960936	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	MYKL1450	03MYKL1450	AY960937	None			L10I, I13V, E35D, M36I, R41K, R57K, H69K, K70R, L89M	CRF01_AE
		04MYKL1450.1	AY960964	None			L10I, I13V, G16E, E35D, M36I, R41K, G52A, R57K, H69K, K70R, L89M	CRF01_AE
	MYKL1482	03MYKL1482	AY960939	None			I13V, E35D, M36I, R41K, R57K, H69K, L89M	CRF01_AE
	MYKL1509	03MYKL1509	AY960940	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
		04MYKL1509.1	AY960969	None			I13V, E35D, M36I, R41K, I62V, H69K, L89M	CRF01_AE
	MYKL1518	03MYKL1518	AY960942	None			I13V, K14R, E35D, M36I, R41K, R57K, H69K, L89M	CRF01_AE
		03MYKL1518.1	AY960970	None			I13V, K14R, E35D, M36I, R41K, R57K, H69K, L89M	CRF01_AE
	MYKL1531	03MYKL1531	AY960943	None			I13V, E35D, M36I, R41K, K45R, H69K, L89M	CRF01_AE
		04MYKL1531.1	AY960971	None			I13V, E35D, M36I, R41K, K45R, H69K, L89M	CRF01_AE
		04MYKL1531.2	AY960972	None			I13V, E35D, M36I, R41K, K45R, H69K, L89M	CRF01_AE
		04MYKL1531.3	AY960973	None			I13V, E35D, M36I, R41K, K45R, H69K, L89M	CRF01_AE
	MYKL1652	04MYKL1652	AY960948	None			I13V, E35D, M36I, R41K, K45R, L63P, H69K, L89M	CRF01_AE
	MYKL1659	04MYKL1659	AY960949	None			E35D, M36I, R41K, I62V, L63S, H69K, L89M	CRF01_AE
	MYKL1870	04MYKL1870	AY960957	None			I13V, E35D, M36I, R41K, R57K, H69K, L89M	CRF01_AE
Tee (2006)	KL016	04_016.1	DQ366663	None			I13IV, K14KR, G16E, L19LV, E35D, M36I, R57RK, H69K, K70R, L89M	CRF01_AE
	KL018	03_018.1	DQ366664	None			I13V, I15V, K20R, E35D, M36I, N37D, R41K, H69K, L89M	CRF01_AE
Watanaveeradej (2006)	99TH_C1080	99_C1080	AY945712	None			I13V, K20R, E35D, M36I, R41K, H69K, V82I, L89M, I93L	CRF01_AE
	01TH_C1436	01_C1436	AY945713	None			E35D, M36I, N37D, R41K, H69K, L89M	CRF01_AE
	00TH_C2101	00_C2101	AY945716	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	00TH_C2257	00_C2257	AY945717	None			I13V, E35D, M36I, R41K, I62V, I64V, H69K, T74S, L89M	CRF01_AE
	99TH_C2405	99_C2405	AY945718	None			I13V, G17E, K20R, E35D, M36I, R41K, H69K, K70R, L89M	CRF01_AE
	01TH_C2570	01_C2570	AY945719	None			I13V, E35D, M36I, N37S, R41K, L63S, H69K, L89M	CRF01_AE
	01TH_C3256	01_C3256	AY945720	None			I13V, I15V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	00TH_C3347	00_C3347	AY945721	None			I13V, E35D, M36I, R41K, I62V, L63P, H69K, K70R, L89M	CRF01_AE
	00TH_C4151	00_C4151	AY945724	None			I13V, I15V, K20R, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	99TH_C4460	99_C4460	AY945726	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	99TH_R1149	99_R1149	AY945727	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	98TH_R1166	98_R1166	AY945728	None			I13V, G16E, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	01TH_R2184	01_R2184	AY945730	None			L10V, I13V, E35D, M36I, R41K, D60E, L63P, H69K, L89M	CRF01_AE
	99TH_R3006	99_R3006	AY945731	None			L10I, I13V, I15V, E35D, M36I, R41K, H69K, V82I, L89M	CRF01_AE
	99TH_R3265	99_R3265	AY945732	None			I13V, E35D, M36I, R41K, L63V, H69K, L89M	CRF01_AE
	00TH_C2254_BE	00_2254_BE	AY945733	None			I13V, I15V, E35D, M36I, R41K, H69K, L89M, T91I	CRF01_AE
	00TH_R1741	00_R1741	AY945734	None			L10I, I13V, E35D, M36I, N37D, R41K, H69K, L89M	CRF01_AE
	C1705	C1705	DQ789392	None			K20R, E35D, M36I, R41K, K45R, H69K, L89M	CRF01_AE
Baker (2007)	800KN	03-800KN	AY803483	None			L10V, I13V, K14R, G16A, E35D, M36I, R41K, R57K, H69K, L89M	CRF01_AE
	P0018	P0018-240105	EF186133	None			I13V, K14R, I15V, E35D, M36L, N37D, R41K, L63T, H69K, V77I, L89M	CRF01_AE
Brumme (2007)	1264	PR_1264	EF368574	None			I13V, L19I, K20I, E35D, M36I, R41K, H69K, I72IV, L89M	CRF01_AE
	1519	PRRT_1519	EF368829	None			I13V, E35D, M36I, R41K, H69K, V82I, L89M	CRF01_AE
Galluzzo (2007)	22100	RW_22100	JQ220059	None			I13V, K20R, E35D, M36I, R41K, R57K, L63P, H69K, L89M	CRF01_AE
Gatanaga (2007)	A03-201010-1	A03-201010-1	AB640063	None			I13V, E35D, M36I, N37NS, R41K, R57K, H69K, I85IS, R87R*, L89M	CRF01_AE
	A04-201019-1	A04-201019-1	AB640074	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	B03-511003-1	B03-511003-1	AB640077	None			I13V, K14R, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	C03-51110040-1	C03-51110040-1	AB640140	None			I13V, E35D, M36I, R41K, H69K, L89M, T91V	CRF01_AE
	C03-51110041-1	C03-51110041-1	AB640141	None			K20R, E35D, M36I, R41K, H69K, K70R, L89I, T91A	CRF01_AE
	C03-51110049-1	C03-51110049-1	AB640149	None			I13V, E35D, N37A, R41K, H69K, L89M	CRF01_AE
	C03-51110050-1	C03-51110050-1	AB640150	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	C03-51110054-1	C03-51110054-1	AB640154	None			I13V, E35D, M36I, R41K, K45R, H69K, L89M	CRF01_AE
	C03-51110060-1	C03-51110060-1	AB640160	None			E35D, M36I, R41K, Q61E, L63V, H69K, L89M	CRF01_AE
	C03-51110063-1	C03-51110063-1	AB640163	None			L10I, I13V, G16A, E35D, M36I, R41K, L63A, H69K, L89M, I93V	CRF01_AE
	C03-51110102-1	C03-51110102-1	AB640202	None			I13V, E35D, M36I, R41K, K45R, R57K, H69K, L89M, I93L	CRF01_AE
	C03-51110116-1	C03-51110116-1	AB640216	None			E35D, M36I, R57K, H69K, L89M	CRF01_AE
	C03-51110118-1	C03-51110118-1	AB640218	None			K20R, E35D, M36I, R41K, H69K, L89M, I93L	CRF01_AE
	C04-51110123-1	C04-51110123-1	AB640223	None			I13V, G16E, K20R, E35D, M36I, R41K, I62V, L63LP, H69K, K70R, L89M, L97F	CRF01_AE
	C04-51110130-1	C04-51110130-1	AB640230	None			L10LI, I15V, K20KR, E35D, M36I, R41K, L63P, H69K, L89M, I93L	CRF01_AE
	C04-51110132-1	C04-51110132-1	AB640232	None			I13V, G16E, E35D, M36I, R41K, R57K, H69K, K70R, I72V, L89M	CRF01_AE
	C04-51110160-1	C04-51110160-1	AB640260	None			I13V, I15V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	C04-51110166-1	C04-51110166-1	AB640266	None			I13V, K20R, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	C04-51110191-1	C04-51110191-1	AB640291	None			E35D, M36I, R41K, H69K, L89M	CRF01_AE
	C04-51110192-1	C04-51110192-1	AB640292	None			I13V, K20I, E35D, M36I, R41K, L63V, I64M, H69K, L89M	CRF01_AE
	C04-51110194-1	C04-51110194-1	AB640294	None			E35D, M36I, R41K, L63LP, H69K, A71V, I93L	CRF01_AE
	C04-51110220-1	C04-51110220-1	AB640319	None		L33F	L10I, I13V, K14R, I15L, E35D, M36IV, R41K, K55R, L63P, H69K, K70R, L89M, I93V	CRF01_AE
	C04-51110224-1	C04-51110224-1	AB640323	None			L10LI, I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	C03-5555-4882-1	C03-5555-4882-1	AB640334	None			I13V, E35D, M36I, R41K, H69K, I72V, L89M	CRF01_AE
	C03-5555-5089-1	C03-5555-5089-1	AB640343	None			T12S, I13V, I15V, E35D, M36I, R41K, R57K, H69K, L89M	CRF01_AE
	C03-5555-5206-1	C03-5555-5206-1	AB640354	None			I13IV, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	C03-5555-5264-1	C03-5555-5264-1	AB640362	None			T12A, E35D, M36I, R41K, H69K, L89M, I93L	CRF01_AE
	C03-5555-5383-1	C03-5555-5383-1	AB640374	None			I13V, G16E, E35D, M36I, R41K, K55R, H69K, K70R, I72IV, L89M	CRF01_AE
	C03-5555-5472-1	C03-5555-5472-1	AB640382	None			I13V, I15V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	C03-5555-5546-1	C03-5555-5546-1	AB640386	None			I13V, K20I, E35D, M36I, R41K, R57K, H69K, K70R, T74S, L89M	CRF01_AE
	C04-5555-5806-1	C04-5555-5806-1	AB640400	None			L10I, I13V, G17E, E35D, M36I, R41K, K45R, L63P, H69K, L89M	CRF01_AE
	C04-5555-5846-1	C04-5555-5846-1	AB640402	None			I13V, K14R, I15IV, K20KI, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	C04-5555-5972-1	C04-5555-5972-1	AB640408	None			I15V, K20R, E35D, M36I, R41K, L63LP, H69K, L89M, I93L	CRF01_AE
	C04-5555-5973-1	C04-5555-5973-1	AB640409	None			I13V, I15V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	C04-5555-6038-1	C04-5555-6038-1	AB640416	None			I13V, I15IV, G17E, E35D, M36I, R41K, H69K, K70KR, L89M	CRF01_AE
	C04-5555-6121-1	C04-5555-6121-1	AB640429	None			T12A, I13V, K14R, I15V, E35D, M36I, R41K, R57K, I62IV, L63P, H69K, L89M	CRF01_AE
	C04-5555-6127-1	C04-5555-6127-1	AB640431	None			L10LV, I13V, I15IV, G16GE, E35D, M36I, N37ND, R41K, H69K, K70R, I72IT, L89M	CRF01_AE
	C04-5555-6196-1	C04-5555-6196-1	AB640439	None			I13V, E35D, M36I, R41K, L63P, H69K, K70R, L89M	CRF01_AE
	C04-5555-6298-1	C04-5555-6298-1	AB640449	None			I13V, K20KIM, E35D, M36I, R41K, R57RK, H69K, V82I, L89M	CRF01_AE
	C04-5555-6320-1	C04-5555-6320-1	AB640453	None			L10LV, I13V, E35D, M36I, R41K, R57RK, I62IV, H69K, L89M	CRF01_AE
	C04-5555-6363-1	C04-5555-6363-1	AB640457	None			L10I, I13V, K14KN, G16E, K20KR, E35D, M36I, R41K, L63NT, H69K, K70R, I72T, L89M	CRF01_AE
	C04-5555-6372-1	C04-5555-6372-1	AB640458	None			I13V, E35D, M36I, R41K, R57K, H69K, V82VI, L89M	CRF01_AE
	C03-2067701-1	C03-2067701-1	AB640465	None			I13V, E35D, M36I, R41K, L63S, H69K, L89M	CRF01_AE
	C03-20671086-1	C03-20671086-1	AB640466	None			L10I, I13V, I15V, E35D, M36I, R41K, C67Y, H69K, L89M	CRF01_AE
	C03-2066158-1	C03-2066158-1	AB640467	None			I15V, K20R, E35D, M36I, R41K, H69K, L89M, I93L	CRF01_AE
	C03-2066162-1	C03-2066162-1	AB640468	None			L10I, I13V, I15V, E35D, M36I, R41K, L63P, H69K, L89M	CRF01_AE
	C03-2066173-1	C03-2066173-1	AB640470	None			I13V, K20R, E35D, M36I, R41K, H69K, I72V, L89M	CRF01_AE
	C03-2066174-1	C03-2066174-1	AB640471	None			L10V, I13V, G16AE, E35D, M36I, R41K, K45KR, R57K, I62IV, L63LP, H69K, V77I, L89M	CRF01_AE
	C03-2066176-1	C03-2066176-1	AB640472	None			L10LI, I13V, G16E, E35D, M36I, R41K, H69K, K70R, L89M	CRF01_AE
	C03-2066177-1	C03-2066177-1	AB640473	None			L10V, I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	C03-2066191-1	C03-2066191-1	AB640474	None			T12TI, I15V, K20IR, E35D, M36I, R41K, K45X, H69K, L89M, I93L	CRF01_AE
	C04-2066199-1	C04-2066199-1	AB640475	None			I13V, D25DN, E35D, M36I, P39T, R41K, I62V, L63P, H69K, L89M	CRF01_AE
	C04-2066210-1	C04-2066210-1	AB640483	None			L10I, I13V, L33V, E35D, M36I, L63P, H69K, L89M, N98I	CRF01_AE
	C04-2066216-1	C04-2066216-1	AB640487	None			I13V, K20R, E34K, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	C04-2066226-1	C04-2066226-1	AB640492	None			I13V, E34K, E35D, M36I, R41K, Q61H, H69K, K70R, I72V, G78R, L89M	CRF01_AE
	C04-2066229-1	C04-2066229-1	AB640495	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	D04-2031-5-1	D04-2031-5-1	AB640506	None			I13V, E35D, M36I, R41K, R57K, H69K, L89M	CRF01_AE
	F03-5105-4-1	F03-5105-4-1	AB640523	None			E35D, M36I, H69K, L89M	CRF01_AE
	H04-201116-1	H04-201116-1	AB640578	None			I13V, E35D, M36I, R41K, R57K, H69K, L89M	CRF01_AE
Hai-Long (2007)	Fj055	Fj055	EF036527	None			R8Q, I13V, E35D, M36I, R41K, K55R, L63P, H69K, I72V, L89M	CRF01_AE
	Fj056	Fj056	EF036529	None			I13V, G16E, L19I, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	Fj057	Fj057	EF036530	None			I13V, I15V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	Fj062	Fj062	EF036531	None			I13V, E35D, M36I, R41K, I64V, H69K, L89M	CRF01_AE
	Fj063	Fj063	EF036532	None			I13V, G16E, K20R, E35D, M36I, R41K, I62V, H69K, L89M	CRF01_AE
	Fj064	Fj064	EF036533	None			I13V, E35D, M36I, R41K, I64V, H69K, L89M	CRF01_AE
Han (2007)	LN33	02CNLN33	EF122520	None			I13V, G16E, K20R, E35D, M36I, R41K, H69K, L89M, I93V	CRF01_AE
	LN36	02CNLN36	EF122521	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	LN40	02CNLN40	EF122524	None			I13V, K20R, E35D, M36I, N37D, R41K, R57K, H69K, K70R, L89M, I93L	CRF01_AE
	LN42	02CNLN42	EF122527	None			L19M, E35D, M36I, R41K, H69K, L89M, I93L	CRF01_AE
	LN47	03CNLN47	EF122530	None			E35D, M36I, R41K, H69K, L89M	CRF01_AE
	LN52	03CNLN52	EF122532	None			I13V, G16E, L19V, E35D, M36I, R41K, H69K, K70R, L89M, I93L	CRF01_AE
	LN62	04CNLN62	EF122535	None			I13V, E35D, M36I, R41K, R57K, H69K, L89M	CRF01_AE
	LN64	04CNLN64	EF122536	None			I13V, L19M, E35D, M36I, R41K, R57K, H69K, L89M, I93L	CRF01_AE
	LN76	04CNLN76	EF122541	None			L19M, E35D, M36I, R41K, H69K, V82I, L89M, I93L	CRF01_AE
	LN77	04CNLN77	EF122542	None			I13V, E35D, M36I, R41K, R57K, H69K, V82I, L89M	CRF01_AE
	LN78	04CNLN78	EF122543	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	LN59	03CNLN59	EF122554	None			T12P, K14R, G16E, E35D, M36I, R41K, H69K, L89M, I93L	CRF01_AE
	LN39	02CNLN39	EF122592	None			I13V, K20R, E35D, M36I, N37D, R41K, R57K, H69K, K70R, L89M	CRF01_AE
Holguin (2007)	582659	582659	EF583193	None			L10IV, I13V, G16E, E35D, M36I, R41K, K45R, L63S, H69K, K70R, L89M	CRF01_AE
Lin (2007)	4V62	4V62	EF078232	None		V32G	I13V, K14*, L24P, D25P, E35D, M36I, R41K, H69I, L89M	CRF01_AE
	4V93	4V93	EF078241	None			L10H, I13V, K20I, E35D, M36I, R41K, I64M, H69K, I72M, L89M	CRF01_AE
	4v347	4v347	EF078264	None			I13V, I15V, G16E, K20I, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	4V354	4V354	EF078277	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
Liu (2007)	fj01	fj01	EF432660	None			L10I, I13V, E35D, M36I, R41K, R57K, H69K, V82I, L89M	CRF01_AE
	fj02	fj02	EF432661	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	fj09	fj09	EF432664	None			I13V, I15V, G16E, K20I, E35D, M36I, R41K, H69K, I72V, G73D, L89M, Q92K	CRF01_AE
	fj11	fj11	EF432665	None			I13V, G16E, L19I, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	fj15	fj15	EF432667	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	fj16	fj16	EF432668	None			I13V, G16E, L19I, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	fj21	fj21	EF432669	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	fj24	fj24	EF432670	None			I13V, E35D, M36I, P39S, R41K, H69K, L89M	CRF01_AE
	fj26	fj26	EF432672	None		L33F	I13V, E35D, M36I, R41K, K55R, L63P, H69K, I72V, L89M, L97F, N98K	CRF01_AE
	fj31	fj31	EF432673	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	fj39	fj39	EF432674	None			I13V, E35D, M36I, R41K, K55R, L63P, H69K, L89M, I93L	CRF01_AE
	fj40	fj40	EF432675	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	fj45	fj45	EF432678	None			E35D, M36I, R41K, H69K, T74S, L89M, I93L	CRF01_AE
	fj46	fj46	EF432679	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	fj47	fj47	EF432680	None			I13V, G16E, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	fj48	fj48	EF432681	None			I13V, I15V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	fj50	fj50	EF432683	None			I13V, E35D, M36I, R41K, K55R, H69K, L89M	CRF01_AE
	fj53	fj53	EF432686	None			L10I, I13V, E35D, M36I, R41K, K43R, L63P, H69K, V82I, L89M, I93V	CRF01_AE
	fj55	fj55	EF432687	None			I13V, E35D, M36I, R41K, K55R, L63P, H69K, I72V, L89M	CRF01_AE
	fj59	fj59	EF432689	None			E35D, M36I, R57K, H69K, V82I, L89M, I93L	CRF01_AE
	fj60	fj60	EF432690	None			L10I, I13V, G16E, E35D, M36I, R41K, L63V, H69K, L89M	CRF01_AE
	fj61	fj61	EF432691	None			L10I, I13V, E35D, M36I, R41K, H69Q, L89M	CRF01_AE
	fj62	fj62	EF432692	None			G16E, K20R, E35D, M36I, R41K, H69K, L89M, I93L	CRF01_AE
	fj63	fj63	EF432693	None			G16E, K20R, E35D, M36I, R41K, H69K, L89M, I93L	CRF01_AE
	fj66	fj66	EF432695	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	fj67	fj67	EF432696	None			I13V, I15V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	fj72	fj72	EF432697	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	fj75	fj75	EF432699	None			E35D, M36I, R41K, H69K, K70R, L89M, I93L	CRF01_AE
	fj77	fj77	EF432701	None			I13V, E35D, M36I, R41K, R57K, H69R, L89M	CRF01_AE
	fj78	fj78	EF432702	None			I13V, K14R, K20I, E21K, E35D, M36I, R41K, H69K, V82I, L89M	CRF01_AE
	fj79	fj79	EF432703	None			E35D, M36I, R41K, H69K, L89M	CRF01_AE
	fj80	fj80	EF432704	None			K14R, E35D, M36I, R41K, H69K, L89M, I93L	CRF01_AE
	fj81	fj81	EF432705	None			L10I, I13V, G16E, E35D, M36I, R41K, R57K, C67Y, H69K, K70R, L89M	CRF01_AE
	fj88	fj88	EF432707	None			I13V, E35D, M36I, R41K, K55R, L63P, H69K, I72V, V77I	CRF01_AE
	fj91	fj91	EF432708	None			L10I, I13V, Q18H, L33V, E35D, M36I, R41K, H69S, L89M	CRF01_AE
	fj93	fj93	EF432709	None			E35D, M36I, R41K, H69K, L89M, I93L	CRF01_AE
	fj94	fj94	EF432710	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	fj96	fj96	EF432711	None			I13V, E35D, M36I, R41K, K45R, L63P, H69K, L89M, I93L	CRF01_AE
	fj36	fj36	EF432712	None			G16E, E35D, M36I, N37S, R41K, H69K, L89M	CRF01_AE
	fj69	fj69	EF432713	None			E35D, M36I, R41K, H69K, L89M	CRF01_AE
	fj12	fj12	EF432714	None			L10I, I13V, E35D, M36I, R41K, R57K, H69K, L89M	CRF01_AE
	fj57	fj57	EF432715	None			I13V, E35D, M36I, R41K, R57K, H69K, L89M	CRF01_AE
	fj18	fj18	EF432716	None			K20R, E35D, M36I, N37D, R41K, L63P, H69K, L89M, I93L	CRF01_AE
	fj06	fj06	EF432717	None			K20R, E35D, M36I, N37D, R41K, D60E, H69K, L89M, I93L	CRF01_AE
	fj35	fj35	EF432718	None			I13V, G16E, K20R, E35D, M36I, R41K, I62V, H69K, L89M	CRF01_AE
	fj30	fj30	EF432721	None			I13V, E35D, M36I, R41K, R57K, H69K, K70R, L89M	CRF01_AE
	fj33	fj33	EF432722	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	fj17	fj17	EF432723	None			I13V, I15V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	fj22	fj22	EF432724	None			I13V, G16E, E35D, M36I, R41K, H69K, K70R, L89M	CRF01_AE
	fj03	fj03	EF432725	None		L33F	I13V, K14R, E35D, M36I, R41K, L63P, H69K, L89M, I93L	CRF01_AE
Liu (2007)	SH052	SH052	EU079050	None			E35D, M36I, R41K, K55KR, H69K, L89M	CRF01_AE
	SH019	SH019	EU079074	None			E35D, M36I, R41K, R57RK, H69K, L89M	CRF01_AE
	SH069	SH069	EU079108	None			E35D, M36I, R41K, H69K, L89M	CRF01_AE
	SH070	SH070	EU079109	None			I15V, E35D, M36I, R41K, H69K, L89M, I93L	CRF01_AE
Razafindratsimandresy (2007)	32	32HIV-SEY	EF143523	None			I13V, G16E, E35D, M36I, R41K, H69K, L89M	CRF01_AE
Vicenti (2007)	3076	36442R	EF376559	None			I13V, E35D, M36I, R41K, R57RK, Q58QK, H69K, L89M	CRF01_AE
von Wyl (2007)	104	5192708	EF449880	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	46	702284	EF449904	None			I13V, G16GE, E35D, M36I, R41K, H69K, L89M, Q92K	CRF01_AE
	79	7208397	EF449927	None			I13V, K14R, I15V, G16E, E35D, M36I, R41K, R57K, H69K, L89M	CRF01_AE
	67	661625	EF449928	None			K14R, T31A, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	141	1461974	EF449960	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	31	5808332	EF449989	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	156	5870795	EF450004	None			I13V, E35D, M36I, R41K, H69K, K70R, L89M	CRF01_AE
		5234204	EF449910	None			L10V, I13V, G16E, E35D, M36I, N37D, R41K, H69K, K70R, L89M	CRF01_AE
Warachit (2007)	CU-98-26	CU-98-26	EF192591	None			I13V, I15V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
Zhong (2007)	D0003	05CN_003	EF199551	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	D0004	05CN_004	EF199552	None			I13V, E35D, M36I, R41K, R57K, H69K, L89M	CRF01_AE
	D0010	05CN_010	EF199557	None			Q2H, E35D, M36I, R41K, L63S, I64M, H69K, L89M, I93L	CRF01_AE
	D0022	05CN_022	EF199565	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	D0024	05CN_024	EF199566	None			E35D, M36I, R41K, H69K, L89M, I93L	CRF01_AE
	D0025	05CN_025	EF199567	None			E35D, M36I, R41K, H69K, L89M	CRF01_AE
	D0026	05CN_026	EF199568	None			E35D, M36I, R41K, H69K, L89M	CRF01_AE
	D0028	05CN_028	EF199570	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	D0034	05CN_034	EF199572	None			E35D, M36I, R41K, H69K, L89M	CRF01_AE
	D0038	05CN_038	EF199575	None			T12P, I13V, E35D, M36I, R41K, H69K, V82I, L89M	CRF01_AE
	D0046	05CN_046	EF199579	None			I13V, K20R, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	D0049	05CN_049	EF199582	None			I13V, G16E, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	D0055	05CN_055	EF199587	None			K20R, E35D, M36I, R41K, L63P, H69K, K70R, L89M, I93L	CRF01_AE
	D0057	05CN_057	EF199588	None			E35D, M36I, R41K, H69K, L89M	CRF01_AE
	D0058	05CN_058	EF199589	None			Q2H, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	D0059	05CN_059	EF199590	None			I13V, I15V, E35D, M36I, R41K, R57K, H69K, L89M	CRF01_AE
	D0060	05CN_060	EF199591	None			T12A, I13V, E35D, M36I, R41K, R57K, H69K, L89M	CRF01_AE
	D0061	05CN_061	EF199592	None			K20R, E35D, M36I, R41K, L63S, H69K, K70R, V82I, L89M, I93L	CRF01_AE
	D0062	05CN_062	EF199593	None			I13V, K14R, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	D0074	05CN_074	EF199602	None			E35D, M36I, R41K, R57K, H69K, L89M	CRF01_AE
	D0077	05CN_077	EF199605	None			E35D, M36I, R41K, H69K, L89M	CRF01_AE
	D0084	05CN_084	EF199612	None			I13V, E35D, M36I, R41K, I62V, H69K, V82I, L89M	CRF01_AE
	D0086	05CN_086	EF199614	None			G16E, K20R, E35D, M36I, R41K, H69K, L89M, I93L	CRF01_AE
	D0088	05CN_088	EF199616	None			K20R, E35D, M36I, R41K, L63S, H69K, K70R, V82I, L89M, I93L	CRF01_AE
	D0089	05CN_089	EF199617	None			I13V, K14R, I15V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	D0095	05CN_095	EF199620	None			I13V, E35D, M36I, R41K, L63P, H69K, L89M	CRF01_AE
Chang (2008)	TW282	TW282	DQ640279	None			I13V, G17E, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	TW3638	TW3638	DQ640280	None			I13V, E35D, M36X, R41K, I62V, H69K, K70R, L89M	CRF01_AE
	TW4794	TW4794	DQ640281	None			I13V, K20I, E35D, M36I, R41K, H69K, V82I, L89M	CRF01_AE
	TW3305	TW3305	DQ640284	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	TW1192	TW1192	DQ643008	None			L10V, I13V, G16E, E35D, M36I, R41K, H69K, K70R, L89M	CRF01_AE
	TW6457	TW6457	DQ666220	None			I13V, E35D, M36I, R41K, I62V, H69K, K70R, L89M	CRF01_AE
	TW621	TW621	EU164862	None			I13V, E35D, M36I, R41K, Q61QE, H69K, K70KR, L89M	CRF01_AE
	TW10065	TW10065	EU164867	None			I13V, E35D, M36I, R41K, H69K, L89M, F99FI	CRF01_AE
	TW3374	TW3374	EU164871	None			I13V, E35D, M36I, R41K, H69K, V82VI, L89M	CRF01_AE
	TW11250	TW11250	EU164923	None			I13V, E35D, M36I, R41K, Q58QR, L63S, H69K, K70R, L89I	CRF01_AE
	TW0219a	TW0219a		None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	TW0233a	TW0233a		None			Q2P, I13V, E35D, M36I, L38F, R41K, L63C, H69K, L89M	CRF01_AE
	TW0242a	TW0242a		None			I13V, I15V, K20KR, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	TW0253a	TW0253a		None			I13V, I15V, L19I, K20R, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	TW0292a	TW0292a		None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	TW0301a	TW0301a		None			I13V, K20I, E35D, M36I, R41K, I62V, H69K, K70R, T74S, V77VI, L89M	CRF01_AE
	TW0312a	TW0312a		None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	TW0319a	TW0319a		None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	TW0338a	TW0338a		None			T12A, I15V, L19I, K20R, E35D, M36I, R41K, H69K, K70R, L89M	CRF01_AE
	TW0348a	TW0348a		None			I13V, I15V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	TW0378a	TW0378a		None			I13V, G16E, K20R, E35D, M36I, R41K, K43KR, K45R, L63P, H69K, L89IM, I93L	CRF01_AE
	TW8431a	TW8431a		None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	TW9241a	TW9241a		None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	TW10063a	TW10063a		None			I13V, E35D, M36I, R41K, H69K, V82I, L89M	CRF01_AE
	TW10076a	TW10076a		None			K20R, E35D, M36I, R41K, I54X, H69K, L89M, I93L	CRF01_AE
	TW10277a	TW10277a		None			I13V, E35D, M36I, R41K, K45R, L63P, H69K, L89M, I93L	CRF01_AE
	TW10350a	TW10350a		None			T12P, E35D, M36I, R41K, L63P, I93L	CRF01_AE
	TW10386a	TW10386a		None			L10I, I13V, E35D, M36I, R41K, L63V, L89M	CRF01_AE
	TW10405a	TW10405a		None			L10I, I13V, E35D, M36I, R41K, L63V, L89M	CRF01_AE
	TW10440a	TW10440a		None			G16E, E35D, M36I, R41K, H69K, L89M, I93L	CRF01_AE
	TW10446a	TW10446a		None			I13V, I15V, E35D, M36I, R41K, H69K, T74X, L89M, I93L	CRF01_AE
	TW10454a	TW10454a		None			I13V, E35D, M36I, R41K, R57K, H69K, L89M	CRF01_AE
	TW9940a	TW9940a		None			G16E, E35D, M36I, R41K, H69K, L89M, I93L	CRF01_AE
	TW10566a	TW10566a		None			I13V, I15V, E35D, M36I, R41K, L63X, H69K, L89M, T91V, I93L	CRF01_AE
	TW6890a	TW6890a		None			I13V, E35D, M36I, R41K, L63C, H69K, L89M	CRF01_AE
	TW7823a	TW7823a		None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	TW2245a	TW2245a		None			I13V, E35D, M36I, R41K, H69K, K70R, I72V, L89M	CRF01_AE
	TW3187a	TW3187a		None			L5S, I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	TW3374a	TW3374a		None			I13V, E35D, M36I, R41K, H69K, V82X, L89M, F99X	CRF01_AE
	TW4088a	TW4088a		None			I13V, G16E, K20R, E35D, M36I, R41K, H69K, I72V, L89M	CRF01_AE
	TW5297a	TW5297a		None			L5F, G16E, K20R, E35D, M36I, R41K, H69K, L89M, I93L	CRF01_AE
	TW7583a	TW7583a		None			I13V, E35D, M36I, N37D, L38F, R41K, R57X, H69K, K70R, L89M	CRF01_AE
	TW0350b	TW0350b		None			I13V, L19M, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	TW10541a	TW10541a		None			I13V, E35D, M36I, N37D, R41K, H69K, K70R, L89M	CRF01_AE
	TW11446a	TW11446a		None			I13V, G16E, K20R, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	TW11544a	TW11544a		None			W6G, I13V, G16E, K20R, E35D, M36I, L38C, R41K, H69K, L89M	CRF01_AE
	TW2444a	TW2444a		None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	TW3802b	TW3802b		None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	TW5385a	TW5385a		None			I13V, E35D, M36I, R41K, H69K, I72X, L89M	CRF01_AE
	TW5407a	TW5407a		None			I13V, E35D, M36I, R41K, K43R, H69K, L89M	CRF01_AE
	TW7700a	TW7700a		None			I13V, G16E, K20R, E35D, M36I, R41K, D60E, H69K, L89M, I93L	CRF01_AE
	TW10012a	TW10012a		None			I13V, E35D, M36I, R41K, L63S, H69K, K70R, L89I	CRF01_AE
	TW10776a	TW10776a		None			I13V, I15V, G16E, E35D, M36I, R41K, I62V, H69K, L89M	CRF01_AE
	TW10943a	TW10943a		None			I13V, K20R, E35D, M36I, R41K, R57RK, H69K, I72IV, V77VI, L89M, L97I	CRF01_AE
	TW13422a	TW13422a		None			K20R, L24S, E34A, E35D, M36I, R41K, Q58R, H69K, L89M	CRF01_AE
	TW5759a	TW5759a		None			I13V, K14R, E35D, M36I, R41K, L63P, H69K, L89M	CRF01_AE
	TW7290a	TW7290a		None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	TW9001a	TW9001a		None			I13V, E35D, M36I, R41K, L63C, H69K, L89M	CRF01_AE
Church (2008)	347758P	347758P	EU380724	None			I13V, G16E, E35D, M36I, R41K, R57K, L63T, I64V, H69K	CRF01_AE
	354756Q	354756Q	EU380726	None			I13V, G16E, K20R, E35D, M36I, R41K, K45R, R57K, H69K, I72V, L89M	CRF01_AE
Gody (2008)	Pt029	Pt029		None			L10I, I13V, G16A, K20R, E35D, M36I, N37D, H69K, K70R, L89M	CRF01_AE
	Pt045	Pt045		None			L10I, I13V, L19F, E35D, M36I, R41K, R57K, H69K, L89M	CRF01_AE
Holguin (2008)	SP4-303556	SP4-303556	EU255377	None			I13V, L19I, E35D, M36I, N37D, R41K, H69K, L89M	CRF01_AE
	SP18-348212	SP18-348212	EU255503	None		L33F	L10M, T12TA, I13V, K14KR, E35D, M36I, N37ND, R41K, I62IV, G68E, H69Q, L89M, I93V	CRF01_AE
	SP29-353349	SP29-353349	EU255514	None			I13V, L19X, E35D, M36I, R41K, R57K, H69K, L89M	CRF01_AE
Ibe (2008)	105	105	AB356166	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	115	115	AB356173	None			T12A, I15V, E35D, M36I, R41K, H69K, L89M, I93L	CRF01_AE
	121	121	AB356175	None			I13V, E35D, M36I, R41K, H69K, K70R, L89M	CRF01_AE
	130	130	AB356183	None			I13V, G16E, E35D, M36I, R41K, H69K, K70R, L89M	CRF01_AE
	133	133	AB356185	None			I13V, E35D, M36I, R41K, L63P, H69K, L89M	CRF01_AE
	164	164	AB356211	None			E35D, M36I, R41K, L63P, H69K, I72V, T74S, V77I, L89M, I93L	CRF01_AE
	173	173	AB356217	None			K20R, E35D, M36I, R41K, Q61E, H69K, I72IV, L89M	CRF01_AE
	185	185	AB356224	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	209	209	AB356240	None			I13V, I15V, E35D, M36I, R41K, H69K, L89M, I93L	CRF01_AE
	228	228	AB356257	None			I13V, I15V, E35D, M36I, N37D, R41K, P44PL, H69K, K70R, L89M	CRF01_AE
	234	234	AB356261	None			K14KR, I15IV, K20R, E35D, M36I, R41K, H69K, L89M, I93L	CRF01_AE
	262	262	AB356278	None			I13V, T26TA, E35D, M36I, R41K, R57K, Q61E, L63P, H69K, L89M	CRF01_AE
	316	316	AB356317	None			E35D, M36I, R41K, H69K, L89M	CRF01_AE
	326	326	AB356325	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	333	333	AB356330	None			L10I, I13V, E35D, M36I, R41K, H69K, K70R, V82VI, L89I, L97LI	CRF01_AE
	363	363	AB356354	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	367	367	AB356358	None			G16E, K20KR, E35D, M36I, R41RK, L63C, H69K, L89M	CRF01_AE
	437	437	AB356406	None			V11A, I13V, K20I, E35D, M36I, R41K, L63LI, H69K, K70R, T74S, L89M, T91A	CRF01_AE
	440	440	AB356408	None			L10I, I13V, G16E, E35D, M36I, R41K, L63I, H69K, L89M	CRF01_AE
	450	450	AB356415	None			L10LI, I13V, G16GE, E35D, M36I, R41K, H69K, L89M, L97I	CRF01_AE
	464	464	AB356424	None			I13V, E35D, M36I, R41K, R57RK, H69K, L89M	CRF01_AE
	467	467	AB356425	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
Nguyen (2008)	001	VN001		None			I13V, E35D, M36I, R41K, H69K, T74S, L89M, I93L, F99X	CRF01_AE
	010	VN010		None			I13V, E35D, M36I, R41K, H69K, L89M, F99X	CRF01_AE
	011	VN011		None			I13V, K14KR, E35D, M36I, R41K, R57RK, H69K, L89M, F99X	CRF01_AE
	014	VN014		None			L10I, I13V, E35D, M36I, R41K, R57K, H69K, L89M, F99X	CRF01_AE
	015	VN015		None			E35D, M36I, R41K, L63LP, H69K, L89M, I93L, F99X	CRF01_AE
	018	VN018		None			G16E, E35D, M36I, R41K, L63C, H69K, L89M, F99X	CRF01_AE
	019	VN019		None			G16GE, E35D, M36I, R41K, K45KR, H69K, L89M, I93X	CRF01_AE
	020	VN020		None			I13X, E35D, M36I, R41K, H69K, L89M, F99X	CRF01_AE
	002	VN002		None			E35D, M36I, R41K, H69K, L89M, F99X	CRF01_AE
	028	VN028		None			I13IV, E35D, M36I, N37D, R41K, H69K, L89M, F99X	CRF01_AE
	029	VN029		None			I13V, G16E, E35D, M36I, R41K, H69K, L89M, F99X	CRF01_AE
	032	VN032		None			I15IV, E35D, M36I, R41K, H69K, L89M, F99X	CRF01_AE
	003	VN003		None			I13V, E35D, M36I, R41K, H69K, K70KR, L89M, F99X	CRF01_AE
	034	VN034		None			I13V, E35D, M36I, R41K, H69K, L89X	CRF01_AE
	036	VN036		None			T12P, I13V, Q18H, E35D, M36I, R41K, L63P, H69K, L89M, F99X	CRF01_AE
	037	VN037		None			I13V, G16GE, E35D, M36I, R41K, H69K, K70R, L89M	CRF01_AE
	039	VN039		None			I13V, G16GE, K20R, E35D, M36I, R41K, L63C, H69K, L89M, F99X	CRF01_AE
	040	VN040		None			I15IV, G16E, E35D, M36I, R41K, L63S, H69K, V82I, L89M, F99X	CRF01_AE
	041	VN041		None			L10V, E35D, M36I, R41K, K45R, Q61E, L63P, H69K, K70KR, A71AT, V82VI, L89M, I93IL, F99X	CRF01_AE
	042	VN042		None			E35D, M36I, R41K, H69K, L89M, F99X	CRF01_AE
	004	VN004		None			I13V, G16GE, K20KR, E35D, M36I, R41K, L63LCFR, H69K, L89M, F99X	CRF01_AE
	043	VN043		None			I13V, E35D, M36I, R41K, H69K, L89M, F99X	CRF01_AE
	044	VN044		None			I13V, G16E, K20R, E35D, M36I, R41K, H69K, L89M, F99X	CRF01_AE
	045	VN045		None			I13V, G16E, E35D, M36I, R41K, H69K, L89M, F99X	CRF01_AE
	046	VN046		None			I13V, E35D, M36I, R41K, D60E, H69K, V77I, L89M, T91V, F99X	CRF01_AE
	047	VN047		None			I13V, G16E, E35D, M36I, R41K, H69K, L89M, F99X	CRF01_AE
	048	VN048		None			E35D, M36I, R41K, H69K, L89M, F99X	CRF01_AE
	049	VN049		None			G16E, E35D, M36I, R41K, L63LIPT, H69K, L89M, I93L, F99X	CRF01_AE
	050	VN050		None			I13V, G16E, K20R, E35D, M36I, P39S, R41K, R57RK, H69K, K70KR, I72IV, L89M	CRF01_AE
	052	VN052		None			I13V, E35D, M36I, R41K, H69K, L89M, I93L, F99X	CRF01_AE
	009	VN009		None			I13V, K20I, E35D, M36I, R41K, H69K, L89M, F99X	CRF01_AE
Ntemgwa (2008)	7750	04CA7750	EU220698	None			L10V, I13V, K14R, G16E, E35D, M36I, R41K, R57K, L63T, H69K, K70R, L89M	CRF01_AE
Riddler (2008)	81177	520793Ib		None			G16E, E35D, M36I, R41K, L63P, H69K, K70R, L89M, I93L	CRF01_AE
Rosen-Zvi (2008)	36	02p36-1		None			L10V, T12I, I13V, I15V, G16E, E35D, M36I, R41K, K45R, L63AT, H69K, I72IV, L89M	CRF01_AE
	82	03p82-1		None			I13V, I15V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	83	06p83-1		None			L10LV, I13V, E35D, M36I, N37D, R41K, L63P, H69K, K70R, L89M	CRF01_AE
		07p83-2		None			L10V, I13V, G16E, E35D, M36I, N37D, R41K, L63S, H69K, K70R, L89M	CRF01_AE
		08p83-3		None			L10V, I13V, E35D, M36I, N37D, R41K, L63S, H69K, K70R, L89M	CRF01_AE
Sirivichayakul (2008)	BED-1	BED-1Pr	JQ364259	None			I13V, E35D, M36I, R41K, I62V, H69K, K70R, L89M	CRF01_AE
	BED-2	BED-2Pr	JQ364260	None			I13V, E35D, M36I, R41K, H69K, K70R, L89M	CRF01_AE
	BED-3	BED-3Pr	JQ364261	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	BED-5	BED-5Pr	JQ364263	None			I13V, G16E, K20R, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	BED-7	BED-7Pr	JQ364265	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	BED-10	BED-10Pr	JQ364268	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	BED-11	BED-11Pr	JQ364269	None			K20R, E35D, M36I, R41K, L63P, H69K, L89M, I93L	CRF01_AE
	BED-15	BED-15Pr	JQ364272	None		L33F	I13V, G17D, E35D, M36I, R41K, K45R, L63P, H69K, L89M, I93V	CRF01_AE
	BED-16	BED-16Pr	JQ364273	None			L10V, I13V, G16E, E35D, M36I, L63S, H69K, L89M	CRF01_AE
	BED-19	BED-19Pr	JQ364275	None			G16E, E35D, M36I, R41K, L63R, H69K	CRF01_AE
	BED-21	BED-21Pr	JQ364277	None			I13V, G16E, K20R, E35D, M36I, R41K, H69K, I72V, L89M	CRF01_AE
	BED-22	BED-22Pr	JQ364278	None			E35D, M36V, R41K, K45R, I62V, I64V, H69K, K70R	CRF01_AE
	BED-23	BED-23Pr	JQ364279	None			I13V, E35D, M36I, R41K, C67Y, H69K, I72V, L89M	CRF01_AE
	BED-25	BED-25Pr	JQ364280	None			I13V, E35D, M36I, R41K, L63P, H69K, K70R, L89M	CRF01_AE
	BED-26	BED-26Pr	JQ364281	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	BED-28	BED-28Pr	JQ364282	None			L10I, I13V, K20R, E35D, M36I, R41K, H69K, L89M, I93V	CRF01_AE
	BED-31	BED-31Pr	JQ364283	None			E35D, M36I, R41K, L63P, H69K, K70R, L89M, I93L	CRF01_AE
	BED-33	BED-33Pr	JQ364285	None			I13V, G16E, K20R, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	BED-34	BED-34Pr	JQ364286	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	BED-35	BED-35Pr	JQ364287	None			E35D, M36I, R41K, Q61E, L63P, H69K, I72M, L89M, I93L	CRF01_AE
	BED-37	BED-37Pr	JQ364289	None			I13V, K20I, E35D, M36I, R41K, L63S, H69K, L89M	CRF01_AE
	BED-38	BED-38Pr	JQ364290	None			E35D, M36I, R41K, H69K, L89M	CRF01_AE
	BED-40	BED-40Pr	JQ364292	None			I13V, E35D, M36I, R41K, D60E, H69K, L89M	CRF01_AE
	BED-44	BED-44Pr	JQ364295	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	BED-45	BED-45Pr	JQ364296	None			I13V, E35D, M36I, R41K, R57K, E65D, H69K, L89M	CRF01_AE
	BED-48	BED-48Pr	JQ364298	None			L10I, I13V, E35D, M36I, R41K, H69K, L89M, I93L	CRF01_AE
	BED-49	BED-49Pr	JQ364299	None			T12P, I13V, K20R, E35D, M36I, R41K, R57K, L63T, H69K, L89M	CRF01_AE
	NBC-1	NBC-1Pr	JQ364301	None			I13V, E35D, M36I, R41K, D60E, H69K, L89M	CRF01_AE
	NBC-2	NBC-2Pr	JQ364302	None			L10I, I13V, E35D, M36I, R41K, L89M	CRF01_AE
	NBC-3	NBC-3Pr	JQ364303	None			L10M, I13V, G17E, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	NBC-4	NBC-4Pr	JQ364304	None			I13V, E35D, M36I, R41K, D60E, H69K, L89M	CRF01_AE
	NBC-5	NBC-5Pr	JQ364305	None			L10I, I13V, E35D, M36I, R41K, L63P, H69K, L89M	CRF01_AE
	NBC-6	NBC-6Pr	JQ364306	None			I13V, K20R, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	NBC-8	NBC-8Pr	JQ364308	None			I13V, E35D, M36I, N37D, R41K, I64V, H69K, K70R, L89M	CRF01_AE
	NBC-9	NBC-9Pr	JQ364309	None			I13V, E35D, M36I, R41K, H69K, V77I, L89M	CRF01_AE
	NBC-11	NBC-11Pr	JQ364311	None			I13V, K14R, E35D, M36I, N37D, R41K, R57K, H69K, K70R, L89M	CRF01_AE
	NBC-12	NBC-12Pr	JQ364312	None			E35D, M36I, R41K, H69K, L89M	CRF01_AE
	NBC-13	NBC-13Pr	JQ364313	None			E35D, M36I, R41K, H69K, L89M	CRF01_AE
	NBC-14	NBC-14Pr	JQ364314	None			I13V, G16E, K20R, E35D, M36I, R41K, H69K, K70R, L89M	CRF01_AE
	NBC-15	NBC-15Pr	JQ364315	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	NBC-16	NBC-16Pr	JQ364316	None			L10V, I13V, I15V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	NBC-17	NBC-17Pr	JQ364317	None			I13V, G16E, K20R, E35D, M36I, R41K, H69K, I72V, L89M	CRF01_AE
	NBC-21	NBC-21Pr	JQ364321	None			E35D, M36I, R41K, K45R, I62V, I64V, H69K, K70R	CRF01_AE
	NBC-22	NBC-22Pr	JQ364322	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	NBC-23	NBC-23Pr	JQ364323	None			E35D, M36I, R41K, H69K, L89M, C95W	CRF01_AE
	NBC-24	NBC-24Pr	JQ364324	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	NBC-27	NBC-27Pr	JQ364327	None			T12P, I13V, E35D, M36I, R41K, L63P, H69K, K70R, L89M	CRF01_AE
	NBC-28	NBC-28Pr	JQ364328	None			I13V, E35D, M36I, R41K, I62V, L63F, H69K, K70R, L89M	CRF01_AE
	NBC-29	NBC-29Pr	JQ364329	None			E35D, M36I, R41K, K45R, H69K, K70R, L89M	CRF01_AE
	NBC-30	NBC-30Pr	JQ364330	None			G16E, K20R, E35D, M36I, R41K, L63S, H69K, L89M	CRF01_AE
	NBC-31	NBC-31Pr	JQ364331	None			L10V, E35D, M36I, R41K, H69K, K70R, L89M	CRF01_AE
	NBC-33	NBC-33Pr	JQ364333	None			L10V, I13V, E35D, M36I, R41K, L63S, H69K, L89M	CRF01_AE
	NBC-35	NBC-35Pr	JQ364335	None			L10I, I13V, E35D, M36I, R41K, H69K, K70R, L89M	CRF01_AE
	NBC-36	NBC-36Pr	JQ364336	None			I13V, G16E, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	NBC-37	NBC-37Pr	JQ364337	None			L10I, I13V, G16E, E35D, M36I, N37D, R41K, H69K, K70R, I72V, P79H, L89I	CRF01_AE
	NBC-38	NBC-38Pr	JQ364338	None			I13V, I15V, E35D, M36I, R41K, R57K, H69K, L89M	CRF01_AE
	NBC-39	NBC-39Pr	JQ364339	None			L10V, I13V, K14R, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	NBC-45	NBC-45Pr	JQ364343	None			E35D, M36I, R41K, L63T, H69K, V82I, L89M, I93L	CRF01_AE
	NBC-47	NBC-47Pr	JQ364344	None			I13V, G16E, K20R, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	NBC-49	NBC-49Pr	JQ364345	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	NBC-50	NBC-50Pr	JQ364346	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
Wang (2008)	CYM004	CYM004	EU921955	None			E35D, M36I, R41K, H69K, L89M	CRF01_AE
	CYM005	CYM005	EU921956	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	CYM009	CYM009	EU921960	None			E35D, M36I, R41K, H69K, L89M, I93L	CRF01_AE
	CYM010	CYM010	EU921961	None			L10I, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	CYM011	CYM011	EU921962	None			E35D, M36I, R41K, H69K, L89M	CRF01_AE
	CYM015	CYM015	EU921964	None			I13V, L19M, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	CYM033	CYM033	EU921979	None			L10I, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	CYM038	CYM038	EU921982	None			E35D, M36I, R41K, H69K, L89M	CRF01_AE
Aghokeng (2009)	CDB0003	CDB0003	GU191634	None			L10V, I13V, K14KN, I15V, G16A, E35D, M36I, R41K, I62V, L63V, I64L, H69K, L89M	CRF01_AE
	HG_0344	HG_0344	GU191660	None			I13V, G17E, E35D, M36I, R41K, I62IV, L63S, H69K, L89M	CRF01_AE
Auwanit (2009)	21	AE-PR21		None			I13V, E35D, M36I, R41K, H69K, V82I, L89M, I93L	CRF01_AE
	61	AE-PR61		None			I13V, E35D, M36I, R41K, K45R, H69K, V82I, L89M, L97I	CRF01_AE
	93	AE-PR93		None			T12P, I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	98	AE-PR98		None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	135	AE-PR135		None			I13V, G16E, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	143	AE-PR143		None			L10M, I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	14	AE-PR14	FJ463513	None			I13V, I15V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	17	AE-PR17	FJ463514	None			I13V, G16E, E35D, M36I, R41K, H69K, K70R, T74A, L89M, T91S	CRF01_AE
	19	AE-PR19	FJ463515	None			L10I, I13V, G16E, E35D, M36I, P39Q, R41K, H69K, I72V, L89M, C95G	CRF01_AE
	23	AE-PR23	FJ463516	None			I13V, I15V, Q18E, E35D, M36I, R41K, R57K, L63T, H69K, L89M	CRF01_AE
	25	AE-PR25	FJ463517	None			E35D, M36I, R41K, I62V, L63H, H69K, L89M	CRF01_AE
	42	AE-PR42	FJ463518	None			K14R, I15IV, L19LQ, E35D, M36I, R41K, I62V, L63ST, H69K, K70R, V82I, L89I	CRF01_AE
	65	AE-PR65	FJ463519	None			L10V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	67	AE-PR67	FJ463520	None			I13V, E35D, M36I, R41K, D60DE, Q61QE, H69K, L89M	CRF01_AE
	68	AE-PR68	FJ463521	None			I13V, G16E, E35D, M36I, R41K, H69K, K70R, L89M	CRF01_AE
	69	AE-PR69	FJ463522	None			E35D, M36I, R41K, Q61QH, L63P, H69K, L89M, I93L	CRF01_AE
	76	AE-PR76	FJ463523	None		V11VI	T12A, I13V, E21K, E35D, M36I, R41K, R57K, I64V, H69K, L89M, T91S	CRF01_AE
	79	AE-PR79	FJ463524	None			L10I, I13V, G16GE, E35D, M36I, R41K, H69K, K70R, I72V, L89M	CRF01_AE
	81	AE-PR81	FJ463525	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	95	AE-PR95	FJ463528	None			I13IV, I15V, Q18E, E35D, M36I, R41K, R57K, Q58T, L63T, H69K, L89M	CRF01_AE
	97	AE-PR97	FJ463529	None			I13V, G17E, K20R, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	104	AE-PR104	FJ463530	None			L10I, I13V, I15V, G16E, K20E, E35D, M36I, R41K, G51*R, L63T, H69K, K70R, L89M	CRF01_AE
	105	AE-PR105	FJ463531	None			I13V, E35D, M36I, N37D, R41K, H69K, K70KR, L89M	CRF01_AE
	111	AE-PR111	FJ463533	None			K20R, E35D, M36I, R41K, Q61E, L63P, H69K, L89M, I93L	CRF01_AE
	112	AE-PR112	FJ463534	None			L10LI, I13V, G16GE, E35D, M36I, R41K, L63AV, H69K, L89M	CRF01_AE
	113	AE-PR113	FJ463535	None			I13V, E35D, M36I, R41K, L63P, H69K, L89M	CRF01_AE
	128	AE-PR128	FJ463539	None			I13V, G17E, K20R, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	130	AE-PR130	FJ463540	None			L10I, I13V, I15V, G16E, E35D, M36I, R41K, L63T, H69K, K70R, L89M	CRF01_AE
	133	AE-PR133	FJ463541	None			I13V, E35D, M36I, N37D, R41K, H69K, K70KR, L89M	CRF01_AE
	134	AE-PR134	FJ463542	None			L10LV, I13V, K14KR, I15V, Q18QH, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	140	AE-PR140	FJ463543	None			I13IV, E35D, M36I, R41K, L63P, H69K, L89M	CRF01_AE
	153	AE-PR153	FJ463544	None			I13V, I15V, E21ED, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	156	AE-PR156	FJ463545	None		L33F	I13V, E35D, M36I, R41K, R57K, C67S, H69K, L89M	CRF01_AE
	158	AE-PR158	FJ463546	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	159	AE-PR159	FJ463547	None			L10I, T12A, K14KR, E35D, M36I, R41K, L63S, H69K, L89M	CRF01_AE
	161	AE-PR161	FJ463548	None			I13V, E35D, M36I, R41K, R57K, H69K, V82I, L89M	CRF01_AE
	162	AE-PR162	FJ463549	None			I13V, I15V, E35D, M36I, R41K, H69K, V82VI, R87RQ, L89M	CRF01_AE
	164	AE-PR164	FJ463550	None			T12P, I13V, E35D, M36I, R41K, H69K, K70KR, V82VI, L89M	CRF01_AE
Ayouba (2009)	2880	2880HALDPR	GQ351972	None			G16E, E35D, M36I, R41K, Q61H	CRF01_AE
	FD0047	FD0047PI	GQ352053	None			I13V, E35D, M36I, N37S, R41K, H69K, L89M	CRF01_AE
	FD0291	FD0291PI	GQ352054	None			I13V, E35D, M36I, N37D, R41K, D60E, L63P, H69K, L89M	CRF01_AE
	FD0296	FD0296PI	GQ352057	None			K14R, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	FD0323	FD0323PI	GQ352058	None			E35D, M36I, R41K, H69K, L89M, I93L	CRF01_AE
	FD0340	FD0340PI	GQ352059	None			I13V, E35D, M36I, R41K, H69K, L89M, L97I	CRF01_AE
	FD0369	FD0369PI	GQ352056	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	FD0414	FD0414PI	GQ352063	None			L10V, I13V, G16E, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	FD0435	FD0435PI	GQ352108	None			I13V, K14KR, E35D, M36I, R41K, H69K, L89I	CRF01_AE
	FD0440	FD0440PI	GQ352065	None			I13V, E35D, M36I, R41K, K45R, H69K, V82I, L89M, T91V	CRF01_AE
	FD0457	FD0457PI	GQ352067	None			K20R, E35D, M36I, R41K, L63P, H69K, L89M, I93L	CRF01_AE
	FD0458	FD0458PI	GQ352068	None		L33F	I13V, E35D, M36I, R41K, H69K, L89M, I93V	CRF01_AE
	FD0459	FD0459PI	GQ352069	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	FD0471	FD0471PI	GQ352070	None			I13V, E35D, M36I, R41K, L63P, H69K, V77I, L89M	CRF01_AE
	FD0481	FD0481PI	GQ352062	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	FD0492	FD0492PI	GQ352109	None			L10V, T12TA, I13V, I15V, E35D, M36I, R41K, R57K, L63V, H69K, L89M	CRF01_AE
	FD0524	FD0524PI	GQ352074	None			G16E, E35D, M36I, R41K, R57K, H69K, K70R, L89M, I93L	CRF01_AE
	FD0525	FD0525PI	GQ352075	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	FD0526	FD0526PI	GQ352076	None			L10V, I13V, E35D, M36I, R41K, L63T, H69K, L89M	CRF01_AE
	FD0527	FD0527PI	GQ352077	None			I15V, G16E, K20R, E35D, M36I, H69K, L89M, I93L	CRF01_AE
	FD0538	FD0538PI	GQ352078	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	FD0539	FD0539PI	GQ352079	None			I13V, E35D, M36I, R41K, L63P, H69K, L89M	CRF01_AE
	FD0549	FD0549PI	GQ352071	None			I13V, I15V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	FD0648	FD0648PI	GQ352090	None			I13V, G16E, E35D, M36I, R41K, H69K, K70R, L89M, T91V	CRF01_AE
	FD0555	FD0555PI	GQ352081	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	FD0565	FD0565PI	GQ352082	None			I15V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	FD0567	FD0567PI	GQ352083	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	FD0585	FD0585PI	GQ352084	None			I13V, G16E, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	FD0610	FD0610PI	GQ352086	None			I13V, K20R, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	FD0639	FD0639PI	GQ352087	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	FD0645	FD0645PI	GQ352088	None		L33F	I13V, E35D, M36I, R41K, R57K, C67Y, H69K, K70R, L89M, I93IV	CRF01_AE
	FD0646	FD0646PI	GQ352080	None		L33F	I13V, E35D, M36I, P39Q, R41K, H69K, L89M, I93V, L97I	CRF01_AE
	FD0832	FD0832PI	GQ352100	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	FD0651	FD0651PI	GQ352091	None			G16E, E35D, M36I, R41K, H69K, L89M, I93L	CRF01_AE
	FD0704	FD0704PI	GQ352093	None			L10I, I13V, G16GE, K20KR, E35D, M36I, R41K, K45R, L63S, H69K, K70R, V82VI, L89M, I93V	CRF01_AE
	FD0707	FD0707PI	GQ352094	None			I13V, I15V, G16E, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	FD0714	FD0714PI	GQ352095	None			E35D, M36I, R41K, H69K, L89M	CRF01_AE
	FD0731	FD0731PI	GQ352096	None			L10V, I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	FD0802	FD0802PI	GQ352097	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	FD0815	FD0815PI	GQ352098	None			I13V, L19M, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	FD0816	FD0816PI	GQ352089	None			L10I, T12P, I13V, E35D, M36I, R41K, L63P, H69K, L89M	CRF01_AE
	FD0901	FD0901PI	GQ352099	None			I13V, E35D, M36I, R41K, K45R, L63S, H69K, L89M	CRF01_AE
	FD0833	FD0833PI	GQ352101	None			I13V, E35D, M36I, R41K, I62V, H69K, L89M	CRF01_AE
	FD0836	FD0836PI	GQ352102	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	FD0837	FD0837PI	GQ352103	None			G16E, K20R, E35D, M36I, R41K, H69K, L89M, I93L	CRF01_AE
	FD0851	FD0851PI	GQ352104	None			I13V, G16E, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	FD0864	FD0864PI	GQ352106	None			I13V, I15V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	R06	R06_PR	GQ352111	None			E35D, M36I, R41K, L63C, H69K, L89M	CRF01_AE
	R07	R07_PR	GQ352112	None			I13V, Q18QP, E35D, M36I, R41K, R57K, H69K, L89M	CRF01_AE
	R09	R09_PR	GQ352113	None			I13V, E35D, M36I, R41K, L63C, H69K, L89M	CRF01_AE
	R10	R10_PR	GQ352114	None			G16E, E34EK, E35D, M36I, P39PS, R41K, D60E, L63C, H69K, L89M	CRF01_AE
	R11	R11_PR	GQ352115	None			I13V, I15V, G16A, E35D, M36I, N37D, R41K, H69K, K70R, L89M	CRF01_AE
	R13	R13_PR	GQ352117	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	R14	R14_PR	GQ352118	None			I13V, G17E, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	R15	R15_PR	GQ352119	None			I13V, E35D, M36I, R41K, R57K, Y59F, L63C, H69K, L89M	CRF01_AE
	R17	R17_PR	GQ352120	None			I13V, E35D, M36I, R41K, H69K, K70R, L89M	CRF01_AE
	R20	R20_PR	GQ352121	None			I13V, G16E, E35D, M36I, R41K, K43R, L63C, H69K, L89M	CRF01_AE
	R21	R21_PR	GQ352122	None			I13V, K20I, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	R22	R22_PR	GQ352123	None			G16E, E35D, M36I, R41KN, K43R, L63C, H69K, L89M, I93L	CRF01_AE
	R24	R24_PR	GQ352125	None			T12S, I13V, L19I, E35D, M36I, R41K, L63C, H69K, L89M	CRF01_AE
	R26	R26_PR	GQ352127	None			I15V, G16E, E35D, M36I, L63C, H69K, L89M	CRF01_AE
	R27	R27_PR	GQ352128	None			I15V, E35D, M36I, R57RK, L63C, H69K, K70KR, L89M, I93IL	CRF01_AE
	R28	R28_PR	GQ352129	None			G16E, E35D, M36I, R41K, I62V, L63C, H69K, L89M	CRF01_AE
	R30	R30_PR	GQ352131	None			I15V, G16E, E35D, M36I, R41K, L63C, H69K, L89M	CRF01_AE
	R31	R31_PR	GQ352132	None			G16E, E35D, M36I, R41K, L63C, H69K, L89M	CRF01_AE
	R33	R33_PR	GQ352134	None			I13V, I15V, E35D, M36I, R41RK, I66IF, H69K, K70KE, V82I, I85IV, L89M, I93L	CRF01_AE
	R34	R34_PR	GQ352135	None			I13V, E35D, M36I, R41K, I66T, H69K, L89M	CRF01_AE
	R35	R35_PR	GQ352136	None			L10I, I13V, G16E, E35D, M36I, R41K, L63C, H69K, K70R, L89M	CRF01_AE
	R36	R36_PR	GQ352137	None			I13V, G16A, E35D, M36I, R41K, L63C, H69K, L89M	CRF01_AE
	R37	R37_PR	GQ352138	None			I15V, E35D, M36I, R41K, L63P, H69K, V82I, L89M, I93L	CRF01_AE
	R38	R38_PR	GQ352139	None			I15V, G16E, E35D, M36I, P39T, R41K, K45R, L63C, H69K, K70R, L89M	CRF01_AE
	R41	R41_PR	GQ352141	None			I13V, E35D, M36I, R41K, H69Q, L89M	CRF01_AE
	R42	R42_PR	GQ352142	None			I13V, G16E, K20R, E35D, M36I, N37D, R41K, G49E, C67W, H69K, K70R, L89M	CRF01_AE
	R44	R44_PR	GQ352144	None			I13V, G16A, K20R, E35D, M36I, N37D, R41K, H69K, K70R, L89M	CRF01_AE
	R46	R46_PR	GQ352145	None			I13V, E35D, M36I, R41K, R57K, L63C, H69K, L89M, I93L	CRF01_AE
	R47	R47_PR	GQ352146	None			E35D, M36I, R41K, L63C, H69K, L89M	CRF01_AE
	R48	R48_PR	GQ352147	None			I15IV, E35D, M36I, R41K, L63C, H69K, L89M	CRF01_AE
	R50	R50_PR	GQ352148	None			G16GE, K20KR, E35D, M36I, R41K, L63C, H69K, L89M	CRF01_AE
	R51	R51_PR	GQ352149	None			L10I, I13V, G16A, E35D, M36I, N37D, R41K, R57RK, I62IV, H69K, K70R, I72E, L89M	CRF01_AE
	R52	R52_PR	GQ352150	None			G16E, E35D, M36I, R41K, L63C, H69K, L89M	CRF01_AE
	R53	R53_PR	GQ352151	None			G16E, E35D, M36I, R41K, L63C, H69K, L89M	CRF01_AE
	R54	R54_PR	GQ352152	None			I13V, G16E, E35D, M36I, R41K, H69D, I72KR, L89M	CRF01_AE
	R55	R55_PR	GQ352153	None			G16E, E35D, M36I, R41K, H69K, L89M, I93L	CRF01_AE
	R56	R56_PR	GQ352154	None			G16E, G17GR, E35D, M36I, R41K, L63C, H69K, L89M	CRF01_AE
	R57	R57_PR	GQ352155	None			I13V, L19I, E35D, M36I, R41K, L63C, H69K, L89M	CRF01_AE
	R58	R58_PR	GQ352156	None			I13V, G16E, E35D, M36I, R41K, L63C, H69K, L89M	CRF01_AE
	R59	R59_PR	GQ352157	None			I15V, G16E, E35D, M36I, R41K, L63C, H69K, L89M	CRF01_AE
	R61	R61_PR	GQ352159	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	R62	R62_PR	GQ352160	None			K14KE, L19M, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	R63	R63_PR	GQ352161	None			G16E, E35D, M36I, R41K, L63C, H69K, L89M, I93L	CRF01_AE
	R65	R65_PR	GQ352162	None			I13V, G16E, K20R, E35D, M36I, R41K, K43R, H69K, L89M	CRF01_AE
	R66	R66_PR	GQ352163	None			I13V, E35D, M36I, R41K, D60E, H69K, L89M	CRF01_AE
	R70	R70_PR	GQ352164	None			I13V, E35D, M36I, R41K, L63C, H69K, L89M	CRF01_AE
	R71	R71_PR	GQ352165	None			I15IV, G16E, K20KR, E35D, M36I, R41K, L63C, H69K, K70R, L89M, I93L	CRF01_AE
	R72	R72_PR	GQ352166	None			I15V, G16E, E35D, M36I, R41K, L63C, H69K, L89M, I93L	CRF01_AE
	R74	R74_PR	GQ352167	None			E35D, M36I, R41K, I62V, H69K, K70R, L89M	CRF01_AE
	R76	R76_PR	GQ352168	None			I13V, G16A, E35D, M36I, N37D, R41K, H69K, K70R, L89M	CRF01_AE
	R77	R77_PR	GQ352169	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	R78	R78_PR	GQ352170	None			I13V, E35D, M36I, R41K, D60E, H69K, V82I, L89M	CRF01_AE
	R79	R79_PR	GQ352171	None			G16E, E35D, M36I, R41K, L63C, H69K, L89M	CRF01_AE
	R80	R80_PR	GQ352172	None			I13V, E35D, M36I, R41K, I64V, H69K, K70R, L89M	CRF01_AE
Brennan (2009)	A25	ARC-A25	EU711473	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	A32	ARC-A32	EU711442	None			I13V, K14R, G17E, L19LM, K20IM, E35D, M36I, R41K, L63P, H69K, K70R, L89M	CRF01_AE
Brumme (2009)	A7531	A7531	GQ371781	None			L10V, I13V, I15V, G16E, E35D, M36I, R41K, L63C, H69K, L89M	CRF01_AE
	M6571	M6571	GQ372015	None			E35D, M36I, R41K, R57RK, L63P, H69K, L89M, I93L	CRF01_AE
Castillo (2009)	14	14PROT	GQ202901	None			K14R, G16E, E35D, M36I, R41K, H69K, K70R, L89M, I93L	CRF01_AE
Eshleman (2009)	K38619W2	07-157002	FJ389104	None			I13V, K14R, G16E, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	K20527W2	08-101565	FJ389121	None			I13V, K20T, E35D, M36I, R41K, K45R, R57K, D60E, L63T, H69K, L89M	CRF01_AE
	G12165A6	08-101572	FJ389125	None			I13V, E35D, M36I, R41K, R57K, H69K, L89M	CRF01_AE
	H09223R9	08-102906	FJ389154	None			I13V, G16E, E35D, M36I, R41K, K45R, H69K, K70R, L89M	CRF01_AE
Fujisaki (2009)	18	18	AB442230	None		L33F	I13V, E35D, M36I, R41K, R57K, H69K, K70KR, L89IM	CRF01_AE
	55	55	AB442244	None			I13V, G16E, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	59	59	AB442246	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	67	67	AB442250	None			L10LI, I13V, G16GE, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	585	585	AB442256	None		L33F	L10LR, I13V, E35D, M36I, R41K, R57K, L63P, H69HKNQ, V77VIM, L89M, I93V	CRF01_AE
	631	631	AB442295	None			I13V, K20R, E35D, M36I, R41K, H69K, V77I, L89M, L97I	CRF01_AE
	651	651	AB442312	None			I13V, E35D, M36I, R41K, I62IV, L63P, C67S, H69K, V77VI, L89M	CRF01_AE
Ishizaki (2009)	E33	E33	FJ006951	None			I13V, G16A, K20R, E35D, M36I, N37D, R41K, L63P, H69K, K70R, L89M, Q92K	CRF01_AE
	C14	C14	FJ006958	None			I13V, E35D, M36I, R41K, R57K, H69K, L89M	CRF01_AE
	C15	C15	FJ006959	None			I13V, G16E, K20R, E35D, M36I, P39Q, R41K, H69K, K70R, L89M	CRF01_AE
	C16	C16g	FJ006960	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	C20	C20c	FJ006963	None			I13V, G16E, K20R, E35D, M36I, R41K, R57K, H69K, L89M	CRF01_AE
	C22	C22a	FJ006965	None			G16E, E35D, M36I, R41K, L63C, H69K, L89M	CRF01_AE
	C25	C25	FJ006967	None			I13V, E35D, M36I, R41K, H69K, T74S, L89M, I93L	CRF01_AE
	C29	C29	FJ006968	None			I13V, G16A, K20I, E35D, M36V, R41K, H69K, L89M	CRF01_AE
	C39	C39	FJ006969	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	C47	C47a	FJ006972	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	C51	C51g	FJ006974	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	C58	C58a	FJ006976	None			I13V, I15V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	C68	C68	FJ006978	None			L10I, I13V, E35D, M36I, R41K, C67Y, H69K, L89M	CRF01_AE
	C78	C78ca	FJ006979	None			G16E, E35D, M36I, R41K, H69K, L89M, I93L	CRF01_AE
	C80	C80aag	FJ006981	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	C89	C89ag	FJ006983	None			L10I, I13V, E35D, M36I, R41K, H69K, V82I, L89M, I93V	CRF01_AE
	C95	C95a	FJ006985	None			E35D, M36I, R41K, L63P, H69K, K70R, L89M	CRF01_AE
	A2_20	A2_20	FJ006987	None			I13V, E35D, M36I, R41K, G68E, H69K, L89M	CRF01_AE
	A2_22	A2_22tc	FJ006988	None			I13V, K20I, E35D, M36I, R41K, I62V, L63P, H69K, L89M	CRF01_AE
	A2_41	A2_41	FJ006990	None			I13V, E35D, M36I, R41K, R57K, D60E, H69K, L89M	CRF01_AE
	A2_51	A2_51g	FJ006991	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	A2_56	A2_56tt	FJ006993	None			I13V, G16E, E35D, M36I, R41K, H69K, K70R, L89M	CRF01_AE
	A2_58	A2_58a	FJ006995	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	A2_61	A2_61c	FJ006997	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	A2_67	A2_67	FJ006999	None			K20R, E35D, M36I, R41K, L63P, H69K, L89M, I93L	CRF01_AE
	A2_84	A2_84ca	FJ007000	None			I13V, L19Q, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	A2_89	A2_89g	FJ007002	None			I13V, G16E, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	A2_92	A2_92	FJ007004	None			L10V, I13V, G16E, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	A2_101	A2_101	FJ007005	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	A2_103	A2_103t	FJ007006	None			E35D, M36I, R41K, L63P, H69K, L89M, I93L	CRF01_AE
	A2_114	A2_114gaa	FJ007008	None			I13V, Q18M, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	A2_122	A2_122	FJ007010	None			E35D, M36I, R41K, H69K, L89M	CRF01_AE
	A2_129	A2_129	FJ007011	None			E35D, M36I, R41K, L63T, H69K, L89M, I93L	CRF01_AE
	A2_135	A2_135a	FJ007012	None			I13V, G16E, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	A2_145	A2_145t	FJ007014	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	A2_154	A2_154	FJ007016	None			I13V, G16E, K20R, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	A2_157	A2_157a	FJ007017	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	A2_162	A2_162	FJ007019	None			I13V, E35D, M36I, R41K, R57K, L63P, H69R, K70Q, L89M	CRF01_AE
	A2_164	A2_164t	FJ007020	None			I13V, E35D, M36I, R41K, R57K, H69K, L89M	CRF01_AE
	A2_174	A2_174ta	FJ007024	None			I13V, I15V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	A2_177	A2_177	FJ007026	None			L10V, I13V, I15V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	A2_178	A2_178	FJ007027	None			I13V, E35D, M36I, R41K, L63M, H69K, K70R, L89M	CRF01_AE
	A2_179	A2_179	FJ007028	None			I13V, K14R, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	A2_187	A2_187	FJ007029	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	A2_188	A2_188t	FJ007030	None			I13V, G16E, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	A2_195	A2_195	FJ007035	None			I13V, G16E, L19I, K20I, E35D, M36I, R41K, K43R, H69K, L89M	CRF01_AE
	A2_206	A2_206	FJ007038	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	A2_211	A2_211	FJ007039	None			I13V, E35D, M36I, R41K, K45R, H69K, L89M	CRF01_AE
	A2_215	A2_215	FJ007040	None			I13V, G17E, K20R, E35D, M36I, R41K, I62V, H69K, L89M	CRF01_AE
	A2_223	A2_223	FJ007041	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	A2_225	A2_225	FJ007042	None			I13V, G16E, E35D, M36I, R41K, L63N, H69K, L89M, T91A	CRF01_AE
	A2_232	A2_232	FJ007044	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	A2_236	A2_236aa	FJ007045	None			I13V, I15V, K20R, E35D, M36I, N37D, R41K, H69K, V82I, L89M, I93L	CRF01_AE
	A2_239	A2_239c	FJ007047	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	A2_241	A2_241g	FJ007049	None			L10I, I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	A2_243	A2_243a	FJ007051	None			I13V, K14R, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	A2_245	A2_245g	FJ007053	None			G16E, E35D, M36I, R41K, H69K, I72V, L89M, I93L	CRF01_AE
	A2_275	A2_275	FJ007057	None			I13V, G16E, E35D, M36I, R41K, H69K, K70R, L89M	CRF01_AE
	A2_281	A2_281t	FJ007058	None			I13V, G16E, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	A2_285	A2_285	FJ007060	None			I13V, G16E, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	A2_294	A2_294a	FJ007061	None			L10I, I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	A2_323	A2_323	FJ007066	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	A2_324	A2_324	FJ007067	None			L19Q, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	A2_326	A2_326	FJ007068	None			E35D, M36I, R41K, H69K, K70R, L89M	CRF01_AE
	A2_336	A2_336	FJ007069	None			L10I, I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	A2_340	A2_340	FJ007070	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	A2_345	A2_345t	FJ007071	None			I13V, E35D, M36I, R41K, L63P, H69K	CRF01_AE
	A2_349	A2_349aaat	FJ007073	None			L10I, I13V, G16E, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	A2_383	A2_383	FJ007081	None			I13V, G16E, K20R, E35D, M36I, P39S, R41K, K45R, H69K, L89M	CRF01_AE
	A2_387	A2_387	FJ007082	None			I13V, I15V, E35D, M36I, R41K, R57K, H69K, L89M	CRF01_AE
	A2_389	A2_389	FJ007083	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	A2_395	A2_395	FJ007084	None			I13V, I15V, K20R, E35D, M36I, N37D, R41K, H69K, L89M	CRF01_AE
	A2_398	A2_398	FJ007085	None			I13V, E35D, M36I, N37D, R41K, K43R, H69K, L89M	CRF01_AE
	A2_399	A2_399g	FJ007086	None			I13V, K20R, E35D, M36I, N37D, R41K, K43R, H69K, L89M	CRF01_AE
	A2_418	A2_418c	FJ007088	None			E35D, M36I, R41K, L63Q, H69K, L89M	CRF01_AE
	A2_419	A2_419	FJ007090	None			I13V, E35D, M36I, N37D, R41K, H69K, L89M	CRF01_AE
	A2_425	A2_425gag	FJ007096	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	A2_426	A2_426	FJ007098	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	A2_441	A2_441	FJ007099	None			I13V, K14R, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	A2_444	A2_444	FJ007100	None			I13V, K20R, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	A2_445	A2_445	FJ007101	None			L10V, I13V, E35D, M36I, R41K, H69K, K70R, L89M	CRF01_AE
	A2_448	A2_448	FJ007102	None			I13V, E35D, M36I, R41K, D60E, H69K, L89M, T91S	CRF01_AE
	A2_451	A2_451	FJ007104	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	A2_460	A2_460	FJ007105	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	A2_470	A2_470	FJ007108	None			E35D, M36I, N37D, R41K, L63P, H69K, L89M, I93L	CRF01_AE
	A2_472	A2_472	FJ007109	None			E35D, M36I, N37D, H69K, L89M	CRF01_AE
	A2_474	A2_474	FJ007110	None			I13V, E35D, M36I, R41K, H69K, K70R, L89M	CRF01_AE
	A2_477	A2_477c	FJ007111	None			I13V, G16E, E35D, M36I, N37K, R41K, I62V, H69K, L89M	CRF01_AE
	A1	A1	FJ007113	None			I13V, E35D, M36I, R41K, H69K, V77I, L89M	CRF01_AE
	A3	A3a	FJ007114	None			I13V, G16E, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	A13	A13ag	FJ007116	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	A25	A25	FJ007120	None			I13V, E35D, M36I, R41K, H69K, K70R, L89M	CRF01_AE
	A35	A35ga	FJ007121	None			I13V, E35D, M36I, N37D, R41K, K43R, H69K, V82I, L89M	CRF01_AE
	A39	A39c	FJ007124	None			I13V, G16E, E35D, M36I, R41K, L63C, H69K, L89M	CRF01_AE
	A40	A40	FJ007126	None			I13V, G16E, E35D, M36I, R41K, H69K, K70R, L89M	CRF01_AE
	A43	A43	FJ007127	None			I13V, E35D, M36I, R41K, R57K, H69R, K70Q, L89M	CRF01_AE
	A47	A47	FJ007130	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	A57	A57	FJ007131	None			I13V, E35D, M36I, R41K, H69K	CRF01_AE
	A67	A67	FJ007136	None			I13V, E35D, M36I, R41K, L63P, I64M, H69K, P79S, L89M	CRF01_AE
	A70	A70	FJ007137	None			I13V, G16E, E35D, M36I, R41K, R57K, H69K, L89I, Q92K	CRF01_AE
	A75	A75ag	FJ007138	None			E35D, M36I, R41K, H69K, L89M, I93L	CRF01_AE
	A80	A80a	FJ007142	None			T12P, I13V, K14R, G16E, E35D, M36I, R41K, H69K, I72V, L89M	CRF01_AE
	A85	A85	FJ007144	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	A93	A93	FJ007146	None			I13V, G16E, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	A96	A96tagg	FJ007147	None			I13V, G16E, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	A98	A98ag	FJ007149	None			E35D, M36I, R41K, H69K, L89M	CRF01_AE
	A106	A106	FJ007153	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	A113	A113	FJ007155	None			I13V, G16E, K20R, E35D, M36I, R41K, Q61E, H69K, K70R, L89M	CRF01_AE
	A117	A117ac	FJ007156	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	A123	A123	FJ007159	None			I13V, E35D, M36I, R41K, I62V, I64L, H69K, P79D, L89M	CRF01_AE
	A129	A129g	FJ007163	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	A134	A134ga	FJ007167	None			I13V, G16E, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	A137	A137	FJ007169	None			E35D, M36I, R41K, H69K, L89M	CRF01_AE
	A140	A140	FJ007170	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	A149	A149	FJ007171	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	A150	A150	FJ007172	None			L10V, I13V, G16E, E35D, M36I, R41K, H69K, K70R, L89M	CRF01_AE
	A152	A152	FJ007173	None			I13V, K14R, G16E, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	A154	A154	FJ007174	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	A159	A159	FJ007177	None			I13V, E35D, M36I, R41K, K45R, H69K, L89M	CRF01_AE
	A160	A160g	FJ007178	None			I13V, I15V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	A163	A163ca	FJ007181	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	A166	A166tg	FJ007183	None			I13V, E35D, M36I, R41K, I62V, H69K, L89M	CRF01_AE
	A168	A168	FJ007187	None			T12P, I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	A174	A174g	FJ007190	None			L10I, I13V, K14R, G16E, E35D, M36I, R41K, L63V, H69K, L89M	CRF01_AE
	A175	A175	FJ007192	None			I13V, E35D, M36I, N37S, R41K, H69K, L89M	CRF01_AE
	A177	A177t	FJ007193	None			I13V, G16E, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	A180	A180ag	FJ007195	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	A185	A185a	FJ007197	None			I13V, G16E, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	A190	A190ga	FJ007201	None			I13V, Q18M, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	A192	A192aa	FJ007203	None			E35D, M36I, R41K, L63I, H69K, L89M	CRF01_AE
	A195	A195	FJ007205	None			I13V, K14R, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	A197	A197	FJ007206	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	A198	A198	FJ007207	None			I13V, G16E, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	A199	A199	FJ007208	None			K20R, E35D, M36I, N37D, R41K, H69K, L89M, I93L	CRF01_AE
	A200	A200a	FJ007209	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	A203	A203	FJ007211	None			L19M, E35D, M36I, R41K, H69K, K70R, V82I, L89M, I93L	CRF01_AE
	A209	A209a	FJ007212	None			I13V, G16E, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	A219	A219	FJ007216	None			I15V, G16E, K20R, E35D, M36I, R41K, H69K, L89M, I93L	CRF01_AE
	A221	A221	FJ007217	None			I15V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	A223	A223	FJ007218	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	A225	A225t	FJ007219	None			L10I, I13V, G16E, E35D, M36I, R41K, L63S, H69K, L89M	CRF01_AE
	A227	A227	FJ007221	None			L10V, I13V, G16E, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	A233	A233a	FJ007224	None			I13V, E35D, M36I, R41K, L63T, H69K, I72T, L89M	CRF01_AE
	A234	A234a	FJ007226	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	A237	A237	FJ007228	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	A248	A248	FJ007235	None			I13V, E35D, M36I, R41K, K45R, H69K, A71T, L89M, I93L	CRF01_AE
	A251	A251	FJ007236	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	A258	A258cag	FJ007239	None			I13V, E35D, M36I, R41K, L63S, H69K, L89M	CRF01_AE
	A260	A260	FJ007241	None			L10I, I13V, G16E, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	A267	A267	FJ007242	None			I13V, E35D, M36I, R41K, D60E, H69K, L89M, T91S	CRF01_AE
	A271	A271	FJ007243	None			I13V, L19V, E35D, M36I, G40E, R41K, K43R, H69K, L89M	CRF01_AE
	A272	A272	FJ007244	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	A276	A276aa	FJ007245	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	A277	A277ta	FJ007247	None			I13V, E35D, M36I, R41K, K45R, H69K, L89M	CRF01_AE
	A281	A281	FJ007249	None			L10I, I13V, K14R, L33V, E35D, M36I, R41K, K45R, H69K, L89M	CRF01_AE
	A285	A285	FJ007252	None			E35D, M36I, R41K, H69K, L89M	CRF01_AE
	A286	A286ct	FJ007253	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	A287	A287	FJ007255	None			G16E, E35D, M36I, R41K, D60E, H69K, L89M, I93L	CRF01_AE
	A289	A289ct	FJ007256	None			I13V, G16E, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	A296	A296	FJ007261	None			I13V, L19M, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	A298	A298	FJ007262	None			I13V, E35D, M36I, R41K, H69K, L89M, I93L	CRF01_AE
	A305	A305	FJ007263	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	A314	A314	FJ007267	None			I13V, I15V, E35D, M36I, R41K, R57K, H69K, L89M	CRF01_AE
	A315	A315	FJ007268	None			I15V, E35D, M36I, R41K, H69K, L89M, I93L	CRF01_AE
	A320	A320t	FJ007271	None			I13V, E35D, M36I, R41K, H69K, K70R, L89M	CRF01_AE
	A321	A321	FJ007273	None			G16A, E35D, M36I, R41K, H69K, L89M, I93L	CRF01_AE
	A323	A323g	FJ007274	None			E35D, M36I, R41K, H69K, L89M, I93L	CRF01_AE
	A331	A331	FJ007276	None			I13V, E35D, M36I, N37D, H69K, L89M	CRF01_AE
	A332	A332	FJ007277	None			I13V, G16E, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	A333	A333a	FJ007278	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	A341	A341g	FJ007282	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	A342	A342	FJ007284	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	A345	A345g	FJ007285	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	A346	A346g	FJ007287	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	A349	A349a	FJ007290	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	A353	A353	FJ007292	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	A355	A355a	FJ007293	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	A357	A357	FJ007295	None			I13V, G16E, K20R, E35D, M36I, P39S, R41K, K45R, H69K, L89M	CRF01_AE
	A360	A360a	FJ007296	None		V11I	I13V, G16E, K20I, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	A361	A361a-07	FJ007298	None			G16E, K20R, E35D, M36I, R41K, H69K, L89M, I93L	CRF01_AE
	A368	A368c	FJ007300	None			G16A, E35D, M36I, R41K, R57K, L63C, H69K, L89M, I93L	CRF01_AE
	A370	A370	FJ007302	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	A381	A381	FJ007303	None			I13V, G16E, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	A387	A387	FJ007304	None			L10I, I13V, G16E, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	A389	A389	FJ007307	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	A392	A392g	FJ007308	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	A394	A394	FJ007310	None			E35D, M36I, R41K, H69K, L89M	CRF01_AE
	A402	A402	FJ007314	None			I13V, G16E, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	A403	A403a	FJ007315	None			I13V, G16E, K20R, E35D, M36I, R41K, R57K, H69K, L89M	CRF01_AE
	A408	A408	FJ007319	None			G16E, E35D, M36I, R41K, K45R, L63P, H69K, L89M, I93L	CRF01_AE
	A411	A411	FJ007320	None			I13V, K14R, G16E, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	A415	A415	FJ007321	None			I13V, I15V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	A417	A417	FJ007322	None			I13V, E35D, M36I, R41K, H69K, L89M, T91A	CRF01_AE
	A421	A421	FJ007325	None			E35D, M36I, R41K, H69K, L89M	CRF01_AE
	A423	A423a	FJ007326	None			E35D, M36I, R41K, H69K, L89M	CRF01_AE
	A434	A434	FJ007328	None			I13V, K20R, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	A442	A442aga	FJ007329	None			G16E, E35D, M36I, R41K, D60E, L63P, H69K, L89M, I93L	CRF01_AE
	A447	A447	FJ007331	None			I13V, G16E, K20R, E35D, M36I, R41K, H69K, I72V, L89M	CRF01_AE
	A452	A452	FJ007332	None			I13V, G16E, E35D, M36I, R41K, H69K, L89M, I93L	CRF01_AE
	A457	A457	FJ007333	None			I13V, G16E, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	A458	A458g	FJ007334	None			G16A, E35D, M36I, R41K, H69K, L89M, I93L	CRF01_AE
	A459	A459	FJ007336	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	A472	A472	FJ007337	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	A475	A475	FJ007338	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	A482	A482	FJ007339	None			I13V, E35D, M36I, R41K, L63V, H69K, L89M	CRF01_AE
	A487	A487g	FJ007340	None			I13V, E35D, M36I, R41K, H69K, K70R, L89M	CRF01_AE
	A496	A496	FJ007345	None			I15V, E35D, M36I, R41K, L63P, H69K, L89M, I93L	CRF01_AE
	E166	E166	FJ007346	None			I13V, G16E, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	A26	A26	FJ007348	None			I13V, E35D, M36I, R41K, H69K, K70R, L89M	CRF01_AE
	A179	A179	FJ007350	None			E35D, M36I, R41K, H69K, L89M	CRF01_AE
	A325	A325	FJ007352	None			I13V, K14R, G16E, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	A328	A328	FJ007353	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	A337	A337	FJ007354	None			I13V, G16E, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	A363	A363	FJ007355	None			I13V, E35D, M36I, R41K, R57K, H69K, L89M	CRF01_AE
	A445	A445c	FJ007357	None			E35D, M36I, R41K, L63P, H69K, V82I, L89M, T91I	CRF01_AE
	A465	A465	FJ007359	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	A2_3	A2_3	FJ007360	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	A2_64	A2_64	FJ007362	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	A2_65	A2_65	FJ007363	None			I13V, E35D, M36I, R41K, K43R, H69K, L89M	CRF01_AE
	A2_90	A2_90	FJ007364	None			I13V, E35D, M36I, R41K, H69K, A71V, L89M, I93L	CRF01_AE
	A2_212	A2_212	FJ007365	None			I13V, E35D, M36I, R41K, R57K, H69K, L89M	CRF01_AE
	A2_382	A2_382	FJ007368	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
Kousiappa (2009)	CY179	CY179	EU673410	None			I13V, E35D, M36I, R41K, R57K, H69K, L89M	CRF01_AE
Koyalta (2009)	35	TCHAD-35	FJ688185	None			I13V, K14R, L19Q, E35D, M36I, R41K, Q61H, H69K, L89M	CRF01_AE
Lee (2009)	S07003	S07003	EU715177	None			I13V, K14R, E35D, M36I, N37D, R41K, R57K, D60E, H69K, K70R, L89M	CRF01_AE
	S07004	S07004	EU715178	None			I13V, K20KR, E35D, M36I, R41K, L63LP, H69K, L89M, I93L	CRF01_AE
	S07030	S07030	EU715179	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	S07018	S07018	EU715180	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	S07024	S07024	EU715181	None			I13V, E35D, M36I, R41K, I62V, H69K, V82I, L89M	CRF01_AE
	S07025	S07025	EU715182	None			T4TS, I13IV, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	S07028	S07028	EU715183	None			I13V, E35D, M36I, P39S, R41K, H69K, L89M	CRF01_AE
	S07007	S07007	EU715184	None			I13V, E35D, M36I, R41K, H69K, I72M, L89M	CRF01_AE
	S07026	S07026	EU715185	None			K20R, E35D, M36I, R41K, R57K, H69K, V77I, L89M, I93L, L97I	CRF01_AE
	S07034	S07034	EU715186	None			I13V, E35D, M36I, R41K, H69K, K70R, I72V, L89M	CRF01_AE
	S07035	S07035	EU715187	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	S07039	S07039	EU715189	None			E35D, M36I, R41K, H69K, L89M	CRF01_AE
	S07017	S07017	EU715191	None			I13V, K20I, E35D, M36I, R41K, C67CW, H69K, K70R, V82I, L89M	CRF01_AE
	S07045	S07045	EU715192	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	S07042	S07042	EU715193	None			L10I, I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	S07020	S07020	EU715194	None			I13V, G16GE, E35D, M36I, R41K, H69K, K70R, I72V, L89M	CRF01_AE
	S07016	S07016	EU715195	None			I13V, G17GE, E35D, M36I, R41K, H69K, K70KQR, L89M	CRF01_AE
	S07008	S07008	EU715196	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	S07047	S07047	EU715221	None			I13V, E35D, M36I, R41K, H69K, L89M, I93L, L97I	CRF01_AE
	S07050	S07050	EU715223	None			I13V, E35D, M36I, R41K, L63P, H69K, L89M	CRF01_AE
	S07052	S07052	EU715225	None			I13V, E35D, M36I, P39S, R41K, H69K, L89M	CRF01_AE
	S07053	S07053	EU715226	None			I13V, E35D, M36I, N37D, R57K, L63P, H69K, K70R, L89M	CRF01_AE
	S07056	S07056	EU715230	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	S07057	S07057	EU715231	None			K14KR, G16GA, E35D, M36I, R41K, H69K, L89M, I93L	CRF01_AE
Liao (2009)	VNBG4	VNBG4	FJ185228	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	VNBG5	VNBG5	FJ185229	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	VNBG6	98VNBG6	FJ185230	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	VNBG7	98VNBG7	FJ185231	None			I13V, E35D, M36I, R41K, R57K, H69K, L89M	CRF01_AE
	VNHD9	98VNHD9	FJ185232	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	VNHD10	98VNHD10	FJ185233	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	VNHD11	98VNHD11	FJ185234	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	VNND15	98VNND15	FJ185235	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	VNND17	98VNND17	FJ185236	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	VNHCM302	97VNHCM302	FJ185238	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	VNHCM303	97VNHCM303	FJ185239	None			L10I, I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	VNHCM310	97VNHCM310	FJ185240	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	VNHCM314	97VNHCM314	FJ185241	None			I13V, E35D, M36I, R41K, R57K, L63C, H69K, L89M	CRF01_AE
	VNHCM319	97VNHCM319	FJ185242	None			I13V, K14R, E35D, M36I, R41K, R57K, H69K, L89M, I93S	CRF01_AE
	VNHCM343	97VNHCM343	FJ185243	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	VNHCM345	97VNHCM345	FJ185244	None			L10I, I13V, G16E, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	VNAG201	97VNAG201	FJ185245	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	VNAG202	97VNAG202	FJ185246	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	VNAG204	97VNAG204	FJ185247	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	VNAG206	97VNAG206	FJ185248	None			I13V, E35D, M36I, R41K, H69K, K70R, L89M	CRF01_AE
	VNAG207	97VNAG207	FJ185249	None			I13V, K20KI, D25Y, E35D, M36I, R41K, Q61H, I62V, L63P, H69K, K70R, L89M	CRF01_AE
	VNAG210	97VNAG210	FJ185251	None			L10I, I13V, K20I, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	VNAG212	97VNAG212	FJ185252	None			I13V, E35D, M36I, R41K, L63C, H69K, L89M	CRF01_AE
	VNAG214	97VNAG214	FJ185253	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	VNAG216	97VNAG216	FJ185254	None			I13V, E35D, M36I, R41K, L63C, H69K, L89M	CRF01_AE
	VNAG218	97VNAG218	FJ185255	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	VNHCM306	97VNHCM306	FJ185259	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	VNHCM309	97VNHCM309	FJ185260	None			I13V, K14R, E35D, M36I, R41K, H69K, L89M	CRF01_AE
Luo (2009)	wh.1890	06HBwh.1890	FJ375097	None			L10V, I13V, K14R, E35D, M36I, R41K, R57K, H69K, L89M	CRF01_AE
Nouhin (2009)	KC02	KC02PROT	FJ531940	None			K20KE, E35D, M36I, R41K, H69K, L89M, Q92QH	CRF01_AE
	KC03	KC03PROT	FJ531941	None			L5LF, I13V, E35D, M36I, R41K, L63C, H69K, L89M	CRF01_AE
	KC04	KC04PROT	FJ531942	None			L10V, K14KR, G16E, E35D, M36I, N37D, R41K, L63Q, H69K, L89M, Q92K	CRF01_AE
	KC06	KC06PROT	FJ531944	None			L5LF, I13V, L19LV, K20I, T26TS, E35D, M36I, R41K, E65EK, H69K, V82I, L89M	CRF01_AE
	KC08	KC08PROT	FJ531946	None			I13V, G16E, K20KR, E35D, M36I, R41K, I62V, G68E, H69K, K70R, I72V, L89M	CRF01_AE
	KC10	KC10PROT	FJ531948	None			I13V, I15V, E35D, M36I, R41K, R57K, H69K, L89M	CRF01_AE
	KC13	KC13PROT	FJ531950	None			I13V, E35D, M36I, R41K, L63C, H69K, V82I, L89M	CRF01_AE
	KC14	KC14PROT	FJ531951	None			L5LF, E35D, M36I, R41K, L63P, H69K, V82I, L89M, I93L	CRF01_AE
	KC15	KC15PROT	FJ531952	None			L5LF, I13IV, L19LV, D25DH, E35D, M36I, R41K, L63C, H69K, L89M	CRF01_AE
	KC16	KC16PROT	FJ531953	None			L5LF, I13V, L19LV, E35D, M36I, R41K, L63FS, H69K, L89M	CRF01_AE
	KC17	KC17PROT	FJ531954	None			L5LF, L19LV, E35D, M36I, R41K, L63C, H69K, L89M, I93L	CRF01_AE
	KC18	KC18PROT	FJ531955	None			I13V, G16E, E35D, M36I, R41K, H69K, K70R, L89M	CRF01_AE
	KC24	KC24PROT	FJ531961	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	KC27	KC27PROT	FJ531964	None			I15V, E35D, M36I, R41K, G51GA, H69K, V82I, L89M, I93L	CRF01_AE
	KC28	KC28PROT	FJ531965	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	KC29	KC29PROT	FJ531966	None			I13V, E35D, M36I, R41K, H69K, K70R, V82I, L89M	CRF01_AE
	KC30	KC30PROT	FJ531967	None			I13V, G16E, E35D, M36I, R41K, R57K, H69K, L89M	CRF01_AE
	KC31	KC31PROT	FJ531968	None			I13V, E35D, M36I, R41K, H69K, K70R, L89M	CRF01_AE
	KC32	KC32PROT	FJ531969	None			I13V, K20R, E35D, M36I, R41K, L63P, H69K, L89M, I93L	CRF01_AE
	KC35	KC35PROT	FJ531971	None			L5LF, L19LV, E35D, M36I, R41K, L63C, H69K, L89M	CRF01_AE
	KC38	KC38PROT	FJ531972	None			G16E, E35D, M36I, R41K, D60E, H69K, K70R, L89M, I93L	CRF01_AE
	KC39	KC39PROT	FJ531973	None			L5LF, E35D, M36I, R41K, R57K, L63LI, H69K, L89M	CRF01_AE
	KC40	KC40PROT	FJ531974	None	V82VL		G16E, G17GR, E35D, M36I, R41K, H69K, L89M, I93L	CRF01_AE
	KC43	KC43PROT	FJ531977	None			I13V, K20KR, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	KC44	KC44PROT	FJ531978	None			L5LF, E21EK, E34EK, E35D, M36I, R41K, C67CW, H69K, L89M, I93L	CRF01_AE
	KC45	KC45PROT	FJ531979	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	KC46	KC46PROT	FJ531980	None			I13V, E35D, M36I, R41K, R57K, H69K, L89M	CRF01_AE
	KC47	KC47PROT	FJ531981	None			L5LF, I15V, G16GE, E35D, M36I, P39S, R41K, H69K, L89M	CRF01_AE
	KC48	KC48PROT	FJ531982	None		L33LI	L10I, I13V, E35D, M36I, R41K, H69K, A71AV, L89M	CRF01_AE
	KC49	KC49PROT	FJ531983	None			I13V, I15V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	KC50	KC50PROT	FJ531984	None			L5LF, I13V, E35D, M36I, R41K, H69K, K70R, L89M	CRF01_AE
	KC52	KC52PROT	FJ531986	None			I13V, E35D, M36I, R41K, L63C, H69K, L89M	CRF01_AE
	KC58	KC58PROT	FJ531991	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	KC59	KC59PROT	FJ531992	None			I13V, E35D, M36I, R41K, H69K, L89M, L97I	CRF01_AE
	KC61	KC61PROT	FJ531993	None			L5LF, I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	KC62	KC62PROT	FJ531994	None			I13V, K14R, E35D, M36I, R41K, L63C, H69K, L89M	CRF01_AE
	KC63	KC63PROT	FJ531995	None			I13V, I15V, E35D, M36I, R41K, I62V, L63P, H69K, V82VI, L89M, F99FL	CRF01_AE
	KC64	KC64PROT	FJ531996	None			E35D, M36I, R41K, L63P, H69K, L89M, I93L	CRF01_AE
	KC66	KC66PROT	FJ531997	None		V11I	I13V, E35D, M36I, N37D, H69K, L89M	CRF01_AE
Sahbandar (2009)	IDJKT070	IDJKT070	AB468573	None			I13V, K20R, E35D, M36I, R41K, K45R, H69K, V77I, L89M, L97I	CRF01_AE
Tu (2009)	5	PBMC5	EU518254	None			I13V, E35D, M36I, R41K, H69R, L89M, I93L	CRF01_AE
		plasma5	EU518303	None			I13V, E35D, M36I, R41K, H69R, L89M, I93L	CRF01_AE
	7	PBMC7	EU518256	None			K20R, E35D, M36I, R41K, H69K, L89M, I93L	CRF01_AE
		plasma7	EU518305	None			E35D, M36I, R41K, H69K, L89M, I93L	CRF01_AE
	15	PBMC15	EU518262	None			E35D, M36I, R41K, H69K, L89M	CRF01_AE
		plasma15	EU518311	None			E35D, M36I, R41K, H69K, L89M	CRF01_AE
	30	PBMC30	EU518273	None			E35D, M36I, R41K, H69K, L89M	CRF01_AE
		plasma30	EU518322	None			E35D, M36I, R41K, H69K, L89M	CRF01_AE
	41	PBMC41	EU518282	None			E35D, M36I, R41K, H69K, L89M	CRF01_AE
		plasma41	EU518331	None			Q2P, K14R, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	42	PBMC42	EU518283	None			E35D, M36I, R41K, H69K, L89M	CRF01_AE
		plasma42	EU518332	None			E35D, M36I, R41K, H69K, L89M	CRF01_AE
	43	PBMC43	EU518284	None			E35D, M36I, R41K, H69K, L89M	CRF01_AE
		plasma43	EU518333	None			E35D, M36I, R41K, H69K, L89M	CRF01_AE
	49	PBMC49	EU518290	None			I13IV, E35D, M36I, R41K, H69K, L89M	CRF01_AE
		plasma49	EU518339	None			E35D, M36I, R41K, H69K, L89M	CRF01_AE
	53	PBMC53	EU518293	None			E35D, M36I, R41K, H69K, L89M	CRF01_AE
		plasma53	EU518342	None			E35D, M36I, R41K, H69K, L89M	CRF01_AE
Vercauteren (2009)	pt2189	59608460	GQ398835	None			E35D, M36I, R41K, H69K, L89M	CRF01_AE
	pt2184	119654565	GQ398840	None			E35D, M36I, R41K, R57K, H69K, L89M, I93L	CRF01_AE
	pt2156	272597461	GQ398868	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	pt2145	339273384	GQ398879	None			E35D, M36I, R41K, H69K, L89M	CRF01_AE
	pt2134	436137206	GQ398890	None			I13V, E35D, M36I, R41K, D60E, Q61E, L63P, H69K, L89M, I93L	CRF01_AE
	pt2087	790272399	GQ398937	None			I13V, K14KR, E35D, M36I, R41K, D60E, L63P, H69K, K70R, I72IT, L89M	CRF01_AE
	pt2072	886924455	GQ398952	None			I13V, K14R, I15IV, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	pt2071	888664425	GQ398953	None			I13V, E35D, M36I, R41K, R57K, H69K, L89M	CRF01_AE
	pt2009	1287777795	GQ399015	None			I13V, I15V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	pt1970	1448749787	GQ399054	None			L10IM, I13V, E35D, M36I, R41K, C67Y, H69K, K70KR, I72V, L89M	CRF01_AE
	pt1960	1520485721	GQ399064	None			I13V, E35D, M36I, R41K, H69K, V82I, L89M	CRF01_AE
	pt1890	1967767053	GQ399134	None			K20KR, E35D, M36I, R41K, L63PS, H69K, L89M, I93L	CRF01_AE
	pt1810	2469465740	GQ399214	None			T12TA, I13IV, E35D, M36I, R41K, H69K, L89M, T91TA, I93IL, L97LI	CRF01_AE
	pt1807	2481643443	GQ399217	None			L10V, I13V, E35D, M36I, N37D, R41K, H69K, L89M	CRF01_AE
	pt1803	2493546002	GQ399221	None			I13V, G16E, K20R, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	pt1801	2498506932	GQ399223	None			I13IV, I15V, E35D, M36I, R41K, R57K, L63T, H69K, L89M	CRF01_AE
	pt1760	2812352826	GQ399264	None			L10I, I13V, G16E, E35D, M36I, R41K, H69K, L89M, F99FL	CRF01_AE
	pt1681	3242820501	GQ399343	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	pt1672	3311242754	GQ399352	None			L10V, I13V, G16E, K20R, E35D, M36I, R41K, L63P, H69K, L89M, I93L	CRF01_AE
	pt1651	3439403171	GQ399373	None			I13V, E35D, M36I, R41K, H69K, K70R, L89M	CRF01_AE
	pt1640	3541430468	GQ399384	None			I13V, K20R, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	pt1636	3560275832	GQ399388	None			E35D, M36I, R41K, H69K, L89M, I93L	CRF01_AE
	pt1595	3787672902	GQ399429	None			L10I, I13V, G16E, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	pt1572	3906779451	GQ399452	None			I13V, G16E, E35D, M36I, N37D, R41K, K45R, R57K, H69K, L89M	CRF01_AE
	pt1546	3jw3yAJwzx	GQ399478	None			I13V, K20R, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	pt1514	4188161655	GQ399510	None			L10I, T12TI, I13V, G16GE, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	pt1462	4507760777	GQ399562	None			I13V, G16E, K20R, E35D, M36I, R41K, H69K, K70R, I72V, L89M	CRF01_AE
	pt1453	4546116369	GQ399571	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	pt1417	4760279859	GQ399607	None			I13V, G16E, K20R, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	pt1376	4IRHRhl7ZP	GQ399648	None			I13V, E35D, M36I, R41K, I62IV, L63PS, H69K, T74TS, L89M	CRF01_AE
	pt1297	5430375436	GQ399727	None			L10I, I13V, K14R, E35D, M36I, R41K, H69K, V82I, L89M, L97I	CRF01_AE
	pt1288	5461870282	GQ399736	None			I15V, E35D, M36I, R41K, H69K, L89M, I93L	CRF01_AE
	pt1160	6238054218	GQ399864	None			I13V, G16E, E35D, M36I, R41K, H69K, K70KR, I72IV, L89M	CRF01_AE
	pt1145	6282149296	GQ399879	None			I13V, I15V, E35D, M36I, R41K, H69K, K70R, L89M	CRF01_AE
	pt1118	6510659522	GQ399906	None			I13V, E35D, M36I, R41K, K43R, H69K, L89M	CRF01_AE
	pt1101	6578125797	GQ399923	None			L10I, I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	pt1001	7209704423	GQ400023	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	pt997	7235844899	GQ400027	None			I13V, E35D, M36I, R41K, H69K, V82I, L89M	CRF01_AE
	pt990	7326852698	GQ400034	None			I13V, I15V, E35D, M36I, R41K, H69K, K70R, L89M	CRF01_AE
	pt938	7618622649	GQ400086	None			E35D, M36I, R41K, K45KR, L63P, H69K, L89M, I93L	CRF01_AE
	pt819	8269843048	GQ400205	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	pt804	8348148138	GQ400220	None			I13V, E35D, M36I, R41K, D60E, I62V, L63P, H69K, L89M	CRF01_AE
	pt679	8Df8tOm8ng	GQ400345	None			I13V, E35D, M36I, R41K, R57K, L63V, I64L, H69K, K70R, I72V, L89M	CRF01_AE
	pt622	9277357784	GQ400402	None			L10I, I13V, E35D, M36I, R41K, H69K, K70R, L89M	CRF01_AE
	pt620	9280081964	GQ400404	None			I13V, E35D, M36I, N37D, R41K, H69K, L89M	CRF01_AE
	pt503	9904009115	GQ400521	None			I13V, G16GE, E35D, M36I, R41K, I62V, H69K, L89M	CRF01_AE
	pt472	ajoMqRKfDo	GQ400552	None			K20R, E35D, M36I, R41K, L63LP, H69K, L89M, I93L	CRF01_AE
	pt465	AoEg2Evi8m	GQ400559	None			I13V, G16E, E35D, M36I, R41K, R57RK, H69K, L89M	CRF01_AE
	pt444	cLYp616hEj	GQ400580	None			W6G, G16E, E35D, M36I, R41K, H69K, L89M, I93L	CRF01_AE
	pt393	G7D0oKdDK8	GQ400631	None			I13V, I15V, K20KR, E35D, M36I, N37D, R41RK, L63LF, H69K, L89M	CRF01_AE
	pt392	g8EJE9wviu	GQ400632	None			I13V, E35D, M36I, R41K, E65D, H69K, L89M	CRF01_AE
	pt377	gskinluLfh	GQ400647	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	pt375	gtHKAHTyyV	GQ400649	None			L10LI, I13V, E35D, M36I, R41K, I62IV, L63HP, H69K, I72V, L89IM	CRF01_AE
	pt357	HvZMjO8ClE	GQ400667	None			I13V, E35D, M36I, R41K, K45R, H69K, V82VI, L89M	CRF01_AE
	pt355	hZk8m1sWVV	GQ400669	None			E35D, M36I, R41K, Q61E, L63P, H69K, L89M, I93L	CRF01_AE
	pt323	JULc9Y2qzk	GQ400701	None			E35D, M36I, R41K, H69K, V82I, L89M, I93L	CRF01_AE
	pt291	Li2bOk211F	GQ400733	None			I13V, L19M, E35D, M36I, R41K, D60E, H69K, L89M	CRF01_AE
	pt285	lPONbZRtMk	GQ400739	None			E35D, M36I, R41K, H69K, V82I, L89M, I93L	CRF01_AE
	pt275	m1w50EisMV	GQ400749	None			I13V, I15V, E35D, M36I, R41K, L63LP, H69K, L89M	CRF01_AE
	pt262	MtEEcRdta4	GQ400762	None			L10I, I13V, K20I, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	pt238	nWm6XBtAc6	GQ400786	None			I13V, G16E, E35D, M36I, N37D, R41K, K45R, R57K, H69K, L89M, Q92K	CRF01_AE
	pt232	oa7yWmwSeu	GQ400792	None			I13V, G16E, E35D, M36I, H69K, K70R, L89M	CRF01_AE
	pt226	okp6kkL1Ec	GQ400798	None			I13V, E35D, M36I, N37D, R41K, R57K, H69K, K70R, L89M	CRF01_AE
	pt207	PHHb74RisP	GQ400817	None			L10IV, I13V, K14KR, G16E, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	pt196	pRDYM109Zu	GQ400828	None			I13IV, G16GE, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	pt194	pSTEv93yAo	GQ400830	None			L10I, I13V, E35D, M36I, R41K, L63P, H69K, V82VI, L89IM, I93IV	CRF01_AE
	pt191	PVUfYROa4v	GQ400833	None			I13V, I15IV, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	pt172	r2WwXWwQHt	GQ400852	None			I13V, I15IV, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	pt169	RC5Rl4rz7h	GQ400855	None			G16E, K20R, E35D, M36I, R41K, R57K, H69K, K70R, I72V, L89M, Q92K	CRF01_AE
	pt168	rDdAVSdeXY	GQ400856	None			L10LV, I13V, G16GE, E35D, M36I, R41K, H69K, K70KR, L89M	CRF01_AE
	pt133	sUWqTcMx34	GQ400891	None			E35D, M36I, R41K, R57K, H69K, V82I, L89I	CRF01_AE
	pt97	uzTZcDw0Jo	GQ400927	None			I13V, K14R, I15V, Q18E, L33V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	pt71	W2QrWEllGp	GQ400953	None			I13V, E35D, M36I, R41K, K45R, H69K, L89M	CRF01_AE
	pt60	WwwFg0tnvg	GQ400964	None			I13V, E35D, M36I, P39PS, R57RK, L63LP, H69K, L89M	CRF01_AE
	pt48	XKy3Xx0wv4	GQ400976	None			L10LI, T12A, I13V, K14KR, G16E, E35D, M36I, R41K, L63A, H69K, L89M, C95CG	CRF01_AE
	pt45	xRhWu7dGlW	GQ400979	None			I13V, I15V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	pt41	Y10LHxy3T4	GQ400983	None			L19M, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	pt40	Y4c4OC8AQS	GQ400984	None			I13V, E35D, M36I, R41K, H69K, L89M, I93L	CRF01_AE
Yebra (2009)	SP42-303556	SP42-303556	EU342808	None			I13V, L19I, E35D, M36I, N37D, R41K, H69K, L89M	CRF01_AE
Bonura (2010)	1193_88	1193_88	GU969548	None		V11I	L10V, T12A, I13V, G16E, K20I, E35D, M36I, R41K, L63V, H69K, L89M	CRF01_AE
Castro (2010)	PHI-5	PHI-5	GQ131600	None			I13V, E35D, M36I, N37D, R41K, H69K, L89M	CRF01_AE
	PHI-18	PHI-18	GQ131613	None			I13V, G16E, E35D, M36V, R41K, K45R, H69K, L89M	CRF01_AE
Chin (2010)	C073	C073	GQ290706	None			E35D, M36I, R41K, H69K, L89M	CRF01_AE
	C074	C074	GQ290707	None			I13V, G16A, L19M, E35D, M36I, R41K, L63P, H69K, L89M, I93L	CRF01_AE
	C087	C087	GQ290709	None			I13V, G16E, E35D, M36I, R41K, H69K, K70R, L89M	CRF01_AE
	C102	C102	GQ290710	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	C181	C181	GQ290718	None			L10V, I13V, K14R, G16E, E35D, M36I, R41K, H69K, K70R, L89M	CRF01_AE
	C182	C182	GQ290719	None			L10I, I13V, E35D, M36I, R41K, L63T, H69K, L89M, L97I	CRF01_AE
	C183	C183	GQ290720	None			E35D, M36I, R41K, H69K, L89M	CRF01_AE
	C184	C184	GQ290721	None			E35D, M36I, R41K, H69K, L89M	CRF01_AE
	C185	C185	GQ290722	None			E35D, M36I, R41K, H69K, L89M	CRF01_AE
	C186	C186	GQ290723	None			E35D, M36I, R41K, H69K, L89M	CRF01_AE
	C187	C187	GQ290724	None			E35D, M36I, R41K, I62V, H69K, L89M	CRF01_AE
	K219	K219	GQ290740	None			I13V, K20R, E35D, M36I, R41K, H69K, L89M, I93L	CRF01_AE
	K234	K234	GQ290742	None			I13V, L19M, E35D, M36I, R41K, R57K, H69K, L89M	CRF01_AE
Diop-Ndiaye (2010)	125HPD	125HPD	FN599683	None			L10I, T12A, I13V, E35D, M36I, R41K, K45R, L63P, H69K, K70R, L89M, T91I	CRF01_AE
Djoko (2010)	680	CD0639	FR666680	None			I13V, K14T, G16E, E35D, M36I, P39AT, R41K, K45R, R57K, I62V, L63T, I64IV, E65D, H69R, L89M	CRF01_AE
	688	CD4607	FR666688	None			I13V, K14R, G16A, E35D, M36I, R41K, R57K, H69K, L89M	CRF01_AE
Djoko (2010)	GQ404	08GQ404	FN557338	None			T12S, I15V, L19V, K20R, E35D, M36I, R41K, R57K, Q61H, L63V, I64M, H69K, L89M, I93L	CRF01_AE
Gonzalez (2010)	924_M00m	924_M00m	GQ427111	None			I13V, G16E, K20R, E35D, M36I, R41K, L63V, H69K, L89M, T91V, I93L	CRF01_AE
Han (2010)	LN091	LN091	FJ531381	None			L10I, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	LN108	LN108	FJ531383	None			I13V, L19M, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	LN087	LN087	FJ531405	None			I13V, L19M, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	LN090	LN090	FJ531406	None			K20R, E35D, M36I, R41K, H69K, L89M, I93L	CRF01_AE
	LN092	LN092	FJ531407	None			I13V, L19M, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	LN105	LN105	FJ531409	None			I13V, L19M, E35D, M36I, R41K, H69K, V77I, L89M	CRF01_AE
	LN109	LN109	FJ531411	None			I13V, L19M, E35D, M36I, R41K, H69K, V82I, L89M, I93L	CRF01_AE
	LN111	LN111	FJ531412	None			I13V, L19M, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	LN112	LN112	FJ531413	None			I13V, L19M, E35D, M36I, R41K, L63P, H69K, L89M, I93L	CRF01_AE
	LN113	LN113	FJ531414	None			I13V, L19M, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	LN114	LN114	FJ531415	None			I13V, G16A, L19M, E35D, M36I, R41K, R57K, L63P, H69K, L89M, I93L	CRF01_AE
	LN115	LN115	FJ531416	None			I13V, E35D, M36I, R41K, I64IL, H69K, L89M	CRF01_AE
	LN121	LN121	FJ531418	None			K20R, E35D, M36I, R41K, H69K, L89M, I93L	CRF01_AE
	LN122	LN122	FJ531419	None			T12P, L19M, E35D, M36I, R41K, L63P, H69K, L89M, I93L	CRF01_AE
	LN123	LN123	FJ531420	None			L19M, E35D, M36I, R41K, R57K, H69K, K70R, V77I, L89M	CRF01_AE
	LN125	LN125	FJ531422	None			I13V, L19M, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	LN128	LN128	FJ531424	None			I13V, G16E, L19I, E35D, M36I, R41K, H69K, L89M, I93L	CRF01_AE
	LN132	LN132	FJ531425	None			I13V, L19M, E35D, M36I, R41K, R57K, H69K, V82I, L89M, I93L	CRF01_AE
	LN138	LN138	FJ531428	None		L33F	I13V, G16A, L19M, E35D, M36I, R41K, G68E, H69K, K70R, L89M, I93L	CRF01_AE
	LN153	LN153	FJ531429	None			G16E, L19M, E35D, M36I, R41K, H69K, L89M, I93L	CRF01_AE
	LN154	LN154	FJ531430	None			L10I, I13V, L19M, E35D, M36I, R41K, L63C, H69K, L89M	CRF01_AE
	LN175	LN175	FJ531431	None			G16E, L19M, K20R, E35D, M36I, R41K, H69K, L89M, I93L	CRF01_AE
	LN176	LN176	FJ531432	None			L19M, E35D, M36I, R41K, H69K, V82I, L89M, I93L	CRF01_AE
	LN178	LN178	FJ531433	None			I13V, L19M, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	LN179	LN179	FJ531434	None			I13V, G16E, L19V, E35D, M36I, R41K, L63V, H69K, K70R, L89M, I93L	CRF01_AE
	LN184	LN184	FJ531435	None			I13V, K14X, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	LN190	LN190	FJ531437	None			L10I, G16E, K20R, L33V, E35D, M36I, R41K, I62V, H69K, L89M	CRF01_AE
	LN191	LN191	FJ531438	None			I13V, K20R, E35D, M36I, N37D, R41K, R57K, H69K, K70R, L89M	CRF01_AE
	LN194	LN194	FJ531439	None			I13V, L19M, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	LN197	LN197	FJ531440	None			I13V, L19M, E35D, M36I, R41K, R57K, H69K, K70R, L89M	CRF01_AE
	LN203	LN203	FJ531441	None			L19M, E35D, M36I, N37D, R41K, H69K, L89M, I93L	CRF01_AE
	SY023	SY023	FJ531442	None			I13V, L19M, K20R, E35D, M36I, R41K, H69K, K70R, V82I, L89M, I93L	CRF01_AE
	SY041	SY041	FJ531443	None			L19M, E35D, M36I, R41K, H69K, V82I, L89M, I93L	CRF01_AE
	SY123	SY123	FJ531444	None			G16E, L19M, K20R, E35D, M36I, R41K, H69K, L89M, I93L	CRF01_AE
	SY147	SY147	FJ531445	None			L19M, E35D, M36I, N37D, R41K, H69K, L89M, I93L	CRF01_AE
	LN144	LN144	FJ531446	None			T12P, I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	LN106	LN106	FJ531447	None			I13V, G16E, L19V, E35D, M36I, R41K, L63V, H69K, K70R, L89M, I93L	CRF01_AE
	LN143	LN143	FJ531448	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	LN104	LN104	FJ531449	None			L19M, E35D, M36I, R41K, H69K, V82I, L89M, I93L	CRF01_AE
	LN152	LN152	FJ531454	None			I13V, L19M, E35D, M36I, R41K, R57K, H69K, K70R, V82I, L89M, I93L	CRF01_AE
	LN158	LN158	FJ531456	None			I13V, L19M, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	LN202	LN202	FJ531458	None			I13V, L19M, E35D, M36I, R41K, H69K, K70R, L89M	CRF01_AE
	SY40	SY40	FJ531459	None			L19M, E35D, M36I, N37D, R41K, H69K, L89M, I93L	CRF01_AE
	LN151	LN151	FJ531462	None			G16E, L19M, E34E*, E35D, M36I, R41K, W42WC, R57K, H69K, K70R, L89M	CRF01_AE
Jullaksorn (2010)	CR03	CR03-Apr08R	GQ857285	None			I13V, K14R, E35D, M36I, R41K, H69K, L89M	CRF01_AE
		CR03-Jul08R	GQ857317	None			I13V, K14R, E35D, M36I, R41K, H69K, L89M	CRF01_AE
		CR03-Jan09D	GQ857381	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	CR04	CR04-Apr08R	GQ857286	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
		CR04-Jul08R	GQ857318	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
		CR04-Oct08R	GQ857348	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
		CR04-Jan09D	GQ857382	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
		CR04-Apr09D	GQ857414	None			I13V, E35D, M36I, R41K, R57K, D60E, H69K, L89M	CRF01_AE
	CR05	CR05-Apr08R	GQ857287	None			I13V, E35D, M36I, R41K, K45R, H69K, V82I, L89M	CRF01_AE
		CR05-Jul08R	GQ857319	None			I13V, E35D, M36I, R41K, K45R, H69K, V82I, L89M	CRF01_AE
		CR05-Oct08R	GQ857349	None			I13V, E35D, M36I, R41K, K45R, H69K, V82I, L89M	CRF01_AE
		CR05-Jan09R	GQ857383	None			I13V, E35D, M36I, R41K, K45R, H69K, V82I, L89M	CRF01_AE
		CR05-Apr09R	GQ857415	None			I13V, E35D, M36I, R41K, K45R, H69K, V82I, L89M, L97I	CRF01_AE
	CR06	CR06-Apr08R	GQ857288	None			I13V, I15V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
		CR06-Jul08R	GQ857320	None			I13V, I15V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
		CR06-Oct08R	GQ857350	None			I13V, I15V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
		CR06-Apr09D	GQ857416	None			I13V, I15V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	CR08	CR08-Apr08R	GQ857289	None			I13V, E35D, M36I, R57K, H69K, L89M	CRF01_AE
		CR08-Jul08R	GQ857322	None			I13V, E35D, M36I, R57K, H69K, L89M	CRF01_AE
		CR08-Oct08R	GQ857352	None			I13V, E35D, M36I, R57K, H69K, L89M	CRF01_AE
		CR08-Jan09D	GQ857385	None			I13V, E35D, M36I, R57K, H69K, L89M	CRF01_AE
		CR08-Apr09R	GQ857417	None			I13V, E35D, M36I, R57K, H69K, L89M	CRF01_AE
	CR09	CR09-Jul08D	GQ857323	None			I13V, E35D, M36I, H69K, L89M	CRF01_AE
		CR09-Oct08R	GQ857353	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
		CR09-Jan09R	GQ857386	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
		CR09-Apr09D	GQ857418	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	CR11	CR11-Apr08R	GQ857291	None			I13V, E35D, M36I, R41K, I64V, H69K	CRF01_AE
		CR11-Jul08R	GQ857324	None			I13V, E35D, M36I, R41K, I64V, H69K	CRF01_AE
		CR11-Oct08R	GQ857354	None			I13V, E35D, M36I, R41K, R57K, H69K, L89M	CRF01_AE
		CR11-Jan09D	GQ857387	None			I13V, E35D, M36I, R41K, R57K, I64V, H69K	CRF01_AE
	CR12	CR12-Apr08R	GQ857292	None			I13V, E35D, M36I, R41K, R57K, H69K, L89M	CRF01_AE
		CR12-Oct08R	GQ857355	None			I13V, E35D, M36I, R41K, R57K, H69K, L89M	CRF01_AE
		CR12-Jan09R	GQ857388	None			I13V, E35D, M36I, R41K, R57K, H69K, L89M	CRF01_AE
		CR12-Apr09R	GQ857419	None			I13V, Q18K, E35D, M36I, R41K, R57K, H69K, L89M	CRF01_AE
	CR15	CR15-Apr08R	GQ857293	None			I13V, E35D, M36I, R41K, L63P, H69K, L89M	CRF01_AE
		CR15-Jul08R	GQ857326	None			I13V, E35D, M36I, R41K, L63P, H69K, L89M	CRF01_AE
		CR15-Oct08R	GQ857357	None			I13V, E35D, M36I, G40R, R41K, L63S, H69K, L89M	CRF01_AE
		CR15-Jan09D	GQ857390	None			I13V, E35D, M36I, R41K, L63P, H69K, L89M	CRF01_AE
		CR15-Apr09R	GQ857421	None			I13V, E35D, M36I, R41K, L63P, H69K, L89M	CRF01_AE
	CR18	CR18-Apr08R	GQ857296	None			I13V, E35D, M36I, R41K, R57K, H69K, L89M	CRF01_AE
		CR18-Jul08R	GQ857329	None			I13V, E35D, M36I, R41K, R57K, H69K, L89M	CRF01_AE
		CR18-Oct08R	GQ857360	None			I13V, E35D, M36I, R41K, R57K, H69K, L89M	CRF01_AE
		CR18-Jan09R	GQ857393	None			I13V, E35D, M36I, R41K, R57K, H69K, L89M	CRF01_AE
		CR18-Apr09R	GQ857424	None			I13V, E35D, M36I, R41K, R57K, H69K, L89M	CRF01_AE
	CR19	CR19-Apr08D	GQ857297	None			G16E, E35D, M36I, R41K, K45R, L63P, H69K, L89M, I93L	CRF01_AE
		CR19-Oct08D	GQ857361	None			G16E, E35D, M36I, R41K, K45R, L63P, H69K, L89M, I93L	CRF01_AE
		CR19-Jan09D	GQ857394	None			G16E, E35D, M36I, R41K, K45R, L63P, H69K, L89M, I93L	CRF01_AE
		CR19-Apr09D	GQ857425	None			G16E, E35D, M36I, R41K, K45R, L63P, H69K, L89M, I93L	CRF01_AE
	CR20	CR20-Apr08D	GQ857298	None			L10V, I13V, K14R, G16E, E35D, M36I, R41K, H69K, K70R, L89M	CRF01_AE
		CR20-Oct08D	GQ857362	None			L10V, I13V, K14R, G16E, E35D, M36I, R41K, H69K, K70R, I72V, L89M	CRF01_AE
		CR20-Jan09D	GQ857395	None			L10V, I13V, K14R, G16E, E35D, M36I, R41K, H69K, K70R, I72V, L89M	CRF01_AE
		CR20-Apr09D	GQ857426	None			L10V, I13V, K14R, G16E, E35D, M36I, R41K, H69K, K70R, L89M	CRF01_AE
	CR21	CR21-Apr08D	GQ857299	None			E35D, M36I, R41K, H69K, L89M	CRF01_AE
		CR21-Jul08D	GQ857331	None			L10I, I15V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
		CR21-Jan09D	GQ857396	None			L10V, T12P, E35D, M36I, R41K, L63T, H69K, L89M	CRF01_AE
	CR22	CR22-Apr08D	GQ857300	None			I13V, I15V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
		CR22-Jul08D	GQ857332	None			I13V, K20R, E35D, M36I, R41K, H69K, L89M	CRF01_AE
		CR22-Oct08D	GQ857363	None			I13V, I15V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
		CR22-Jan09D	GQ857397	None			I13V, I15V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	CR23	CR23-Apr08D	GQ857301	None			L10M, I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
		CR23-Jul08D	GQ857333	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
		CR23-Oct08D	GQ857364	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
		CR23-Jan09D	GQ857398	None			L10M, I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
		CR23-Apr09D	GQ857427	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	CR24	CR24-Apr08D	GQ857302	None			I13V, E35D, M36I, R41K, I62V, H69K, L89M	CRF01_AE
		CR24-Jul08D	GQ857334	None			I13V, E35D, M36I, R57K, I62V, H69K, T74S, L89M	CRF01_AE
		CR24-Oct08D	GQ857365	None			I13V, E35D, M36I, R57K, I62V, H69K, T74S, L89M	CRF01_AE
		CR24-Jan09D	GQ857399	None			I13V, E35D, M36I, R57K, I62V, H69K, T74S, L89M	CRF01_AE
		CR24-Apr09D	GQ857428	None			I13V, E35D, M36I, R57K, I62V, H69K, T74S, L89M	CRF01_AE
	CR25	CR25-Apr08D	GQ857303	None			E35D, M36I, R41K, K43R, L63P, H69K, L89M, I93L	CRF01_AE
		CR25-Jul08D	GQ857335	None			E35D, M36I, R41K, L63P, H69K, L89M, I93L	CRF01_AE
		CR25-Oct08D	GQ857366	None			E35D, M36I, R41K, L63P, H69K, L89M, I93L	CRF01_AE
		CR25-Jan09D	GQ857400	None			G17E, E35D, M36I, R41K, K45R, G49E, L63P, E65K, H69K, L89M, I93L	CRF01_AE
	CR26	CR26-Apr08D	GQ857304	None			L10I, I13V, K14R, K20R, E35D, M36I, R41K, C67G, H69K, L89M	CRF01_AE
		CR26-Jul08D	GQ857336	None			T12S, I13V, E35D, M36I, R41K, R57K, H69K, L89M	CRF01_AE
		CR26-Oct08D	GQ857367	None			I13V, E35D, M36I, R41K, R57K, H69K, L89M	CRF01_AE
		CR26-Jan09D	GQ857401	None			I13V, E35D, M36I, R41K, R57K, H69K, L89M	CRF01_AE
		CR26-Apr09D	GQ857429	None			T12S, I13V, E35D, M36I, R41K, R57K, H69K, L89M	CRF01_AE
	CR27	CR27-Apr08D	GQ857305	None			I13V, K20R, E35D, M36I, N37D, R41K, R57K, H69K, L89M	CRF01_AE
		CR27-Oct08D	GQ857368	None			I13V, K20R, E35D, M36I, N37D, R41K, R57K, H69K, L89M	CRF01_AE
		CR27-Jan09D	GQ857402	None			I13V, K20R, E35D, M36I, N37D, R41K, R57K, H69K, L89M	CRF01_AE
		CR27-Apr09D	GQ857430	None			I13V, K20R, E35D, M36I, N37D, R41K, R57K, H69K, L89M	CRF01_AE
	CR28	CR28-Apr08D	GQ857306	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
		CR28-Jul08D	GQ857337	None			L10I, I13V, K14R, K20R, E35D, M36I, R41K, C67G, H69K, L89M	CRF01_AE
		CR28-Oct08D	GQ857369	None			L10I, I13V, K14R, K20R, E35D, M36I, R41K, C67G, H69K, L89M	CRF01_AE
		CR28-Jan09D	GQ857403	None			L10I, I13V, K14R, K20R, E35D, M36I, R41K, C67G, H69K, L89M	CRF01_AE
	CR29	CR29-Apr08D	GQ857307	None			I13V, K20R, E35D, M36I, R41K, H69K, L89M	CRF01_AE
		CR29-Jul08D	GQ857338	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
		CR29-Oct08D	GQ857370	None			I13V, I15V, G16A, E35D, M36I, R41K, H69K, L89M	CRF01_AE
		CR29-Jan09D	GQ857404	None			I13V, G16E, K20R, E35D, M36I, R41K, H69K, L89M	CRF01_AE
		CR29-Apr09D	GQ857431	None			I13V, G16E, K20R, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	CR30	CR30-Apr08D	GQ857308	None			L10I, I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
		CR30-Jul08D	GQ857339	None			L10I, I13V, G16E, E35D, M36I, R41K, H69K, K70R, L89M	CRF01_AE
		CR30-Oct08D	GQ857371	None			L10I, I13V, E35D, M36I, R41K, H69K, K70R, L89M	CRF01_AE
		CR30-Jan09D	GQ857405	None			L10I, I13V, E35D, M36I, R41K, H69K, K70R, L89M	CRF01_AE
	CR31	CR31-Apr08D	GQ857309	None			I13V, K14R, E35D, M36I, R41K, R57K, H69K, L89M	CRF01_AE
		CR31-Jul08D	GQ857340	None			I13V, K14R, E35D, M36I, R41K, R57K, H69K, L89M	CRF01_AE
		CR31-Oct08D	GQ857372	None			I13V, K14R, E35D, M36I, R41K, R57K, H69K, L89M	CRF01_AE
		CR31-Apr09D	GQ857432	None			I13V, K14R, E35D, M36I, R41K, R57K, H69K, L89M	CRF01_AE
	CR32	CR32-Apr08D	GQ857310	None			K20R, E35D, M36I, R41K, H69K, I72V, L89M	CRF01_AE
		CR32-Jul08D	GQ857341	None			K20R, E35D, M36I, R41K, H69K, I72V, L89M	CRF01_AE
		CR32-Oct08D	GQ857373	None			K20R, E35D, M36I, R41K, H69K, I72V, L89M	CRF01_AE
		CR32-Jan09D	GQ857406	None			K20R, E35D, M36I, R41K, H69K, I72V, L89M	CRF01_AE
		CR32-Apr09D	GQ857433	None			K20R, E35D, M36I, R41K, H69K, I72V, L89M	CRF01_AE
	CR35	CR35-Apr08D	GQ857311	None			L10M, I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
		CR35-Jul08D	GQ857342	None			E35D, M36I, R41K, I62V, C67Y, H69K, L89M	CRF01_AE
		CR35-Oct08D	GQ857374	None			L10V, I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
		CR35-Jan09D	GQ857407	None			E35D, M36I, R41K, K45R, H69K, L89M	CRF01_AE
		CR35-Apr09D	GQ857434	None			L10M, I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	CR36	CR36-Apr08D	GQ857312	None			I13V, E35D, M36I, R41K, R57K, H69K, L89M	CRF01_AE
		CR36-Jul08D	GQ857343	None			I13V, E35D, M36I, R41K, K43R, H69K, L89M	CRF01_AE
		CR36-Oct08D	GQ857375	None			I13V, I15V, L19V, E35D, M36I, R41K, K43R, H69K, L89M	CRF01_AE
		CR36-Jan09D	GQ857408	None			I13V, I15V, E35D, M36I, R41K, K43R, H69K, L89M	CRF01_AE
		CR36-Apr09D	GQ857435	None			L10I, I13V, G16E, L19I, E35D, M36I, R41K, K43R, H69K, K70R, L89M	CRF01_AE
	CR37	CR37-Apr08D	GQ857313	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
		CR37-Jul08D	GQ857344	None			I13V, K14R, E35D, M36I, R41K, H69K, L89M	CRF01_AE
		CR37-Oct08D	GQ857376	None			I13V, I15V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
		CR37-Jan09D	GQ857409	None			L10I, I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	CR38	CR38-Apr08D	GQ857314	None			I13V, G17E, K20I, E35D, M36I, R41K, H69K, K70R, L89M	CRF01_AE
		CR38-Jul08D	GQ857345	None			I13V, K14R, G17E, K20I, E35D, M36I, R41K, H69K, L89M	CRF01_AE
		CR38-Oct08D	GQ857377	None			I13V, G17E, K20I, E35D, M36I, R41K, H69K, K70R, L89M	CRF01_AE
		CR38-Jan09D	GQ857410	None			I13V, G17E, K20I, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	CR40	CR40-Apr08D	GQ857315	None			I13V, E35D, M36I, R41K, L63A, H69K, A71T, L89M	CRF01_AE
		CR40-Jul08D	GQ857346	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
		CR40-Oct08D	GQ857379	None			I13V, E35D, M36I, R41K, L63A, H69K, L89M	CRF01_AE
		CR40-Jan09D	GQ857412	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
		CR40-Apr09D	GQ857437	None			I13V, E35D, M36I, R41K, L63A, H69K, L89M	CRF01_AE
	CR02	CR02-Jul08R	GQ857316	None			I13V, I15V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
		CR02-Oct08R	GQ857347	None			I13V, I15V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
		CR02-Jan09R	GQ857380	None			I13V, I15V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
		CR02-Apr09D	GQ857413	None			I13V, I15V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	CR07	CR07-Jul08R	GQ857321	None			I13V, G16E, K20I, E35D, M36I, R41K, K43R, R57K, H69K, L89M	CRF01_AE
		CR07-Oct08R	GQ857351	None			I13V, G16E, K20I, E35D, M36I, R41K, K43R, R57K, H69K, L89M	CRF01_AE
		CR07-Jan09D	GQ857384	None			I13V, G16E, K20I, E35D, M36I, R41K, K43R, R57K, H69K, L89M	CRF01_AE
	CR14	CR14-Jul08R	GQ857325	None			E35D, M36I, R41K, R57K, I62V, H69R, L89M, I93L	CRF01_AE
		CR14-Oct08R	GQ857356	None			E35D, M36I, R41K, I62V, H69R, L89M, I93L	CRF01_AE
		CR14-Jan09R	GQ857389	None			E35D, M36I, R41K, I62V, H69R, L89M, I93L	CRF01_AE
		CR14-Apr09D	GQ857420	None			E35D, M36I, R41K, I62V, H69R, L89M, I93L	CRF01_AE
	CR39	CR39-Oct08D	GQ857378	None			I13V, E35D, M36I, R41K, H69K, K70R, L89M	CRF01_AE
		CR39-Jan09D	GQ857411	None			I13V, G16R, E35D, M36I, R41K, G68R, H69K, K70R, L89M	CRF01_AE
		CR39-Apr09D	GQ857436	None			I13V, E35D, M36I, R41K, H69K, K70R, L89M	CRF01_AE
Mosha (2010)	S11Pol	S11Pol	JQ071459	None			I13V, K20R, E35D, M36I, R41K, K45R, R57K, L63S, H69K, L89M	CRF01_AE
	S68Pol	S68Pol	JQ071487	None			T12P, I13V, E35D, M36I, R41K, K45R, R57K, L63P, C67H, H69K, L89M	CRF01_AE
Moussa (2010)	20	8-CP001029	HM117944	None			L10IV, I13V, G16A, K20KR, E35D, M36I, N37D, H69K, K70KR, L89M	CRF01_AE
Phan (2010)	ND06	ND06	AB519452	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	ND08	ND08	AB519453	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	ND11	ND11	AB519455	None			I13V, E35D, M36I, R41K, L63C, H69K, L89M, T91V	CRF01_AE
	ND14	ND14	AB519456	None			I13V, G16E, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	ND16	ND16	AB519457	None			G16A, E35D, M36I, D60E, H69K, L89M, I93L	CRF01_AE
	ND22	ND22	AB519458	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	ND23	ND23	AB519459	None			L10V, I13V, G16E, E35D, M36I, R41K, Q61E, H69K, K70R, V82I, L89M	CRF01_AE
	ND26	ND26	AB519461	None			L10I, I13V, G16E, E35D, M36I, R41K, L63F, H69K, K70R, L89M	CRF01_AE
	ND29	ND29	AB519462	None			L10I, I13V, E35D, M36I, N37D, R41K, H69K, V82I, L89M	CRF01_AE
	ND39	ND39	AB519465	None			L10V, I13V, G16E, K20R, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	ND40	ND40	AB519466	None			L10M, I13V, G16E, E35D, M36I, R41K, D60E, Q61E, H69K, K70R, L89M, I93V	CRF01_AE
	ND41	ND41	AB519467	None			E35D, M36I, R41K, R57K, H69K, L89M	CRF01_AE
	ND42	ND42	AB519468	None			I13V, G16E, E35D, M36I, R41K, H69K, V77X, L89M	CRF01_AE
	ND43	ND43	AB519469	None			I13V, G16A, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	ND49	ND49	AB519471	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	ND50	ND50	AB519472	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	O903	O903	AB519475	None			I13V, I15V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	O905	O905	AB519476	None			E35D, M36I, R41K, H69K, L89M	CRF01_AE
	O906	O906	AB519477	None			E35D, M36I, R41K, H69K, L89M	CRF01_AE
	O907	O907	AB519478	None			G16E, L19I, E35D, M36I, R41K, H69K, L89M, I93L	CRF01_AE
	O908	O908	AB519479	None			I13V, G16E, K20I, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	O911	O911	AB519482	None			T12A, I13V, G16E, K20I, E35D, M36I, R41K, L63S, H69K, L89M, T91A	CRF01_AE
	O912	O912	AB519483	None			L10I, I13V, G16E, K20R, E35D, M36I, R41K, L63C, H69K	CRF01_AE
	O914	O914	AB519485	None			I13V, G16E, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	O915	O915	AB519486	None			L10I, I13V, G16E, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	O916	O916	AB519487	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	O917	O917	AB519488	None			G16E, E35D, M36I, R41K, H69K, L89M, I93L	CRF01_AE
	O918	O918	AB519489	None			I13V, G16E, K20R, E35D, M36I, R41K, H69K, L89M, I93L	CRF01_AE
	O919	O919	AB519490	None			E35D, M36I, R41K, H69K, L89M	CRF01_AE
	O921	O921	AB519492	None			T12P, I13V, K14R, Q18H, E35D, M36I, R41K, H69K, V82I, L89M	CRF01_AE
	O922	O922	AB519493	None			I13V, G16E, K20I, E35D, M36I, R41K, L63P, H69K, K70R, L89M	CRF01_AE
	O925	O925	AB519496	None			L10I, T12A, I13V, G16E, K20R, E35D, M36I, R41K, I62V, L63S, H69K, L89M	CRF01_AE
	O926	O926	AB519497	None			T12P, I13V, K14R, E35D, M36I, R41K, L63P, H69K, L89M	CRF01_AE
	O928	O928	AB519499	None			I13V, G16E, E35D, M36I, N37D, R41K, R57K, L63P, H69K, L89M, I93X	CRF01_AE
	O929	O929	AB519500	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	O930	O930	AB519501	None			I13V, K14R, G16A, E35D, M36I, R41K, L63P, H69K, L89M, I93L	CRF01_AE
	O931	O931	AB519502	None			I13V, G16E, E35D, M36I, R41K, H69K, K70R, L89M	CRF01_AE
	O932	O932	AB519503	None			I13V, I15V, E35D, M36I, N37D, R41K, H69K, L89M	CRF01_AE
	O934	O934	AB519505	None			G16E, E35D, M36I, R41K, L63C, H69K, I93L	CRF01_AE
	O935	O935	AB519506	None			L10V, T12P, I13X, G16E, E35D, M36I, R41K, L63V, H69K, L89M	CRF01_AE
	O936	O936	AB519507	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	O937	O937	AB519508	None			L10I, I13V, I15V, E35D, M36I, N37D, R41K, H69Q, K70R, L89M	CRF01_AE
	O938	O938	AB519509	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	O939	O939	AB519510	None			I13V, G16E, E35D, M36I, R41K, H69K, I72V, L89M	CRF01_AE
	O941	O941	AB519511	None			E35D, M36I, R41K, R57K, H69K, L89M	CRF01_AE
	O942	O942	AB519512	None			I13V, G16E, E35D, M36I, R41K, H69K, K70R, L89I	CRF01_AE
	O945	O945	AB519515	None			E35D, M36I, R41K, H69K, L89M	CRF01_AE
	O947	O947	AB519517	None			I13V, E35D, M36I, R41K, L63P, H69K, P79D, L89M	CRF01_AE
	O948	O948	AB519518	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	O949	O949	AB519519	None			I13V, E35D, M36I, R41K, H69K, K70R, I72V, L89M	CRF01_AE
	O950	O950	AB519520	None			L10I, I13V, E35D, M36I, R41K, R57K, H69K, V82I, L89M	CRF01_AE
	O951	O951	AB519521	None			L10I, I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	NB01	NB01	AB519523	None			I15V, G16E, E35D, M36I, R41K, H69R, V77I, V82I, L89M, I93L	CRF01_AE
	NB02	NB02	AB519524	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	NB03	NB03	AB519525	None			I13V, E35D, M36I, N37D, R41K, K43R, H69K, L89M	CRF01_AE
	NB05	NB05	AB519526	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	NB08	NB08	AB519527	None			L10I, I13V, G16E, E35D, M36I, R41K, H69K, K70R, L89M	CRF01_AE
	NB09	NB09	AB519528	None			I13V, E35D, M36I, R41K, K45R, L63P, H69K, K70R, L89M	CRF01_AE
	NB10	NB10	AB519529	None			I13V, K14R, G16E, E35D, M36I, R41K, H69K, K70R, L89M	CRF01_AE
	NB12	NB12	AB519530	None			I13V, G16E, E35D, M36I, R41K, H69K, K70R, L89M, T91A	CRF01_AE
	NB14	NB14	AB519531	None			G16E, K20R, E35D, M36I, R41K, L63C, H69K, L89M, I93L	CRF01_AE
	NB21	NB21	AB519534	None			G16E, E35D, M36I, R41K, L63C, H69K, L89M, I93L	CRF01_AE
	NB24	NB24	AB519536	None			L10I, I13V, G16E, E35D, M36I, R41K, H69K, K70R, V77I, L89M	CRF01_AE
	NB25	NB25	AB519537	None			K20R, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	NB27	NB27	AB519539	None			T12P, G16E, E35D, M36I, N37D, R41K, L63C, H69K, K70R, L89I	CRF01_AE
	NB30	NB30	AB519540	None			I13V, G16E, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	NB33	NB33	AB519542	None			I13V, K14R, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	NB36	NB36	AB519544	None			K14R, I15V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	NB37	NB37	AB519545	None			I13V, E35D, M36I, R41K, H69K, K70R, L89M	CRF01_AE
	NB38	NB38	AB519546	None			T12P, K14R, G16E, E35D, M36I, R41K, L63S, H69K, L89M	CRF01_AE
	NB40	NB40	AB519547	None			I13V, I15V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	NB42	NB42	AB519548	None			I13V, G16E, E35D, M36I, R41K, H69K, K70R, L89M	CRF01_AE
	NB44	NB44	AB519550	None			I13V, K20I, E35D, M36I, R41K, H69K, V82I, L89M	CRF01_AE
	NB45	NB45	AB519551	None			I13V, G16E, E35D, M36I, R41K, D60E, I62V, H69K, L89M	CRF01_AE
	NB46	NB46	AB519552	None			I13V, E35D, M36I, N37D, R41K, H69K, L89M	CRF01_AE
	NB47	NB47	AB519553	None			I13V, E35D, M36I, R41K, H69K, I72V, L89M	CRF01_AE
	NB48	NB48	AB519554	None			I13V, E35D, M36I, N37D, R41K, K43R, L63R, H69K, L89M	CRF01_AE
	NB49	NB49	AB519555	None			I13V, I15V, G16E, E35D, M36I, N37D, R41K, K43R, H69K, I72V, L89M	CRF01_AE
	AH01	AH01	AB519558	None			I13V, I15V, E35D, M36I, R41K, H69K, V77I, L89M	CRF01_AE
	AH02	AH02	AB519559	None			E35D, M36I, R41K, H69K, L89M, I93L	CRF01_AE
	AH03	AH03	AB519560	None			I13V, G16E, K20R, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	AH05	AH05	AB519562	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	AH06	AH06	AB519563	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	AH07	AH07	AB519564	None			I13V, G16E, E35D, M36I, R41K, L63C, H69K, L89M	CRF01_AE
	AH08	AH08	AB519565	None			E35D, M36I, R41K, H69K, L89M, I93L	CRF01_AE
	AH10	AH10	AB519566	None			I13V, G16E, E35D, M36I, N37D, R41K, H69K, L89M, Q92R	CRF01_AE
	AH11	AH11	AB519567	None			I13V, G16E, E35D, M36I, P39T, R41K, K45R, H69K, K70R, I72V, L89M	CRF01_AE
	AH13	AH13	AB519568	None			R8Q, I13V, E35D, M36I, R41K, D60E, H69K, L89M, I93L	CRF01_AE
	AH22	AH22	AB519572	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	AH23	AH23	AB519573	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	AH24	AH24	AB519574	None			I13V, E35D, M36I, R41K, R57K, L63S, H69K, L89M	CRF01_AE
	AH25	AH25	AB519575	None			I13V, E35D, M36I, R41K, R57K, L63S, H69K, L89M	CRF01_AE
	AH26	AH26	AB519576	None			L10I, I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	AH30	AH30	AB519579	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	AH31	AH31	AB519580	None			I13V, G16E, K20R, E35D, M36I, R41K, H69K, K70R, L89M	CRF01_AE
	AH33	AH33	AB519582	None			I13V, G16E, E35D, M36I, R41K, H69K, K70R, L89M	CRF01_AE
	AH36	AH36	AB519585	None			L10V, I13V, G16E, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	AH37	AH37	AB519586	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	AH40	AH40	AB519587	None		V11I	I13V, G16E, K20R, E35D, M36I, R41K, L63C, H69K, L89M	CRF01_AE
	AH41	AH41	AB519588	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	AH42	AH42	AB519589	None			I15V, E35D, M36I, R41K, H69K, T74S, L89M, I93L	CRF01_AE
	AH43	AH43	AB519590	None			T12P, I13V, K14R, G16E, E35D, M36I, R41K, H69K, V82I, L89M	CRF01_AE
	AH45	AH45	AB519591	None			I13V, K20R, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	AH47	AH47	AB519593	None			G16A, E35D, M36I, R41K, L63S, H69K, L89M	CRF01_AE
	AH48	AH48	AB519594	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	ND07	ND07	AB519596	None			I13V, E35D, M36I, R41K, L63P, H69K, K70R, L89M	CRF01_AE
	ND09	ND09	AB519597	None			L10V, I13V, G16E, K20R, E35D, M36I, R41K, H69K, I72T, L89I	CRF01_AE
	ND13	ND13	AB519598	None			I13V, E35D, M36I, R41K, R57K, H69K, L89M	CRF01_AE
	ND17	ND17	AB519599	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	ND27	ND27	AB519600	None			G16E, E35D, M36I, R41K, H69K, L89M, I93L	CRF01_AE
	ND32	ND32	AB519601	None			I13V, G16E, K20R, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	ND33	ND33	AB519602	None			T12I, G16E, E35D, M36I, N37D, R41K, L63C, H69K, L89M, I93L	CRF01_AE
	ND44	ND44	AB519604	None			I13V, K20R, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	ND45	ND45	AB519605	None			I13V, I15V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	ND48	ND48	AB519606	None			I13V, I15V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	NB04	NB04	AB519607	None			I13V, E35D, M36I, N37D, R41K, H69K, L89M	CRF01_AE
	NB06	NB06	AB519608	None			I13V, G16E, E35D, M36I, R41K, K43R, H69K, L89M	CRF01_AE
	NB07	NB07	AB519609	None			I13V, G16E, E35D, M36I, R41K, H69K, K70R, V77I, L89M	CRF01_AE
	NB11	NB11	AB519610	None		G48R	I13V, G16E, E35D, M36I, R41K, C67Y, H69K, L89M	CRF01_AE
	NB13	NB13	AB519611	None			I13V, G16E, E35D, M36I, R41K, H69K, K70R, L89M	CRF01_AE
	NB19	NB19	AB519612	None			E35D, M36I, R41K, H69K, V82I, L89M, I93L	CRF01_AE
	NB20	NB20	AB519613	None			G16E, E35D, M36I, R41K, K45R, L63C, H69K	CRF01_AE
	NB29	NB29	AB519615	None			G16E, E35D, M36I, N37K, P39S, R41K, R57K, L63C, H69K, L89M, I93L	CRF01_AE
	NB34	NB34	AB519616	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	NB39	NB39	AB519617	None			L10I, I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	NB41	NB41	AB519618	None			G16A, E35D, M36I, R41K, H69K, V82I, L89M, I93L	CRF01_AE
	NB50	NB50	AB519619	None			G16E, E35D, M36I, P39T, R41K, H69K, L89M, I93L	CRF01_AE
	NB51	NB51	AB519620	None			I13V, E35D, M36I, N37D, R41K, H69K, L89M	CRF01_AE
	AH16	AH16	AB519622	None			L10I, I13V, E35D, M36I, R41K, H69K, K70R, L89M	CRF01_AE
	AH38	AH38	AB519624	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
Sanders-Buell (2010)	569M	569M	GQ477441	None			L10I, T12P, I13V, L19I, E35D, M36I, R41K, C67W, H69K, L89M	CRF01_AE
Selimova (2010)	08MOSR	08MOSR	HM345543	None			L10LI, I13V, K14KR, E35D, M36I, R41K, R57K, I62IV, C67CY, H69K, V77I, L89M	CRF01_AE
	42MOS	42MOS	HM345571	None			I13V, E35D, M36I, R41K, R57K, H69K, V77I, L89M	CRF01_AE
	43MOS	43MOS	HM345572	None			I13V, E35D, M36I, R41K, R57K, H69K, V77I, L89M	CRF01_AE
	48MOSR	48MOSR	HM345576	None			I13V, G16A, E35D, M36I, R41K, R57K, H69K, V77I, L89M	CRF01_AE
Tovanabutra (2010)	KECst_015	KECst_015	FJ623490	None			I13V, E35D, M36I, R41K, R57K, L63P, H69N, I72L, L89M	CRF01_AE
Towler (2010)	400541-A	400541-A	HM037869	None			I13V, G16E, K20R, E35D, M36I, R41K, K43R, H69K, K70R, L89M	CRF01_AE
von Wyl (2010)	4798588	4798588	GQ848140	None			L10I, I13V, G16GE, K20R, E35D, M36I, R41K, D60DE, L63PS, H69K, L89M, I93LV	CRF01_AE
Zhang (2010)	0518	CNsd0518	GQ443554	None			E35D, M36I, R41K, H69K, T74S, L89M, I93L	CRF01_AE
	05176	CNsd05176	GQ443561	None			I13V, E35D, M36I, R41K, R57K, L63LP, H69K, L89M	CRF01_AE
	05178	CNsd05178	GQ443562	None		L33F	I13V, E35D, M36I, R41K, L63LP, H69K, K70KR, L89M, I93V	CRF01_AE
	05179	CNsd05179	GQ443563	None			I13V, E35D, M36I, R41K, R57K, H69K, L89M	CRF01_AE
	06121	CNsd06121	GQ443567	None			I13V, E35D, M36V, R41K, I62V, H69K, K70R, V82I, L89M	CRF01_AE
	0692	CNsd0692	GQ443574	None			E35D, M36I, R41K, R57K, H69K, L89M	CRF01_AE
	0525	CNsd0525	GQ443579	None			I13V, L19I, E35D, M36I, R41K, H69K, K70KR, V82I, L89M	CRF01_AE
	06134	CNsd06134	GQ443580	None			E35D, M36I, R41K, L63LV, H69K, L89M	CRF01_AE
	06149	CNsd06149	GQ443581	None			I13V, L19I, E35D, M36I, R41K, H69K, V82I, L89M	CRF01_AE
	06179	CNsd06179	GQ443584	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	06133	CNsd06133	GQ443586	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	06119	CNsd06119	GQ443587	None			I13IV, K14R, E35D, M36I, R41K, L63LP, H69K, L89M, I93IL	CRF01_AE
	0695	CNsd0695	GQ443589	None			I13V, L19M, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	0654	CNsd0654	GQ443590	None			E35D, M36I, R41K, H69K, L89M	CRF01_AE
	06157	CNsd06157	GQ443594	None			I13V, G16E, K20I, E35D, M36I, R41K, H69K, K70R, L89M	CRF01_AE
	06145	CNsd06145	GQ443597	None			I13V, G16A, E35D, M36I, R41K, R57K, H69K, K70R, L89M	CRF01_AE
Zolfo (2010)	A14683	A 14683 M6	HM565641	None			L10V, K20R, E35D, M36I, R41K, Q61E, L63P, H69K, L89M	CRF01_AE
		A 14683 M12	HM565688	None			L10V, K20R, E35D, M36I, R41K, Q61E, L63P, H69K, L89M	CRF01_AE
		A 14683 M18	HM565621	None			L10V, K14R, K20R, E35D, M36I, R41K, Q61E, L63P, H69K, L89M	CRF01_AE
	A14968	A 14968 M12	HM565666	None			I13V, E35D, M36I, R41K, L63LP, H69K, L89M	CRF01_AE
	A15241	A 15241 M12	HM565667	None			E35D, M36I, R41K, I62IV, H69K, L89M	CRF01_AE
	A14446	A 14446 M24	HM565668	None			I13V, K14KR, I15V, E35D, M36I, R41K, L63LP, H69K, K70R, L89M	CRF01_AE
	A14922	A 14922 M12	HM565669	None			Q18E, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	A12855	A 12855 M12	HM565671	None			L10V, I13V, I15V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	A13197	A 13197 M30	HM565672	None			L10I, I13V, E35D, M36I, R41K, D60E, Q61E, H69K, L89M	CRF01_AE
	A14533	A 14533 M18	HM565673	None			I13V, E35D, M36I, R41K, K45R, H69K, V82I, L89M	CRF01_AE
	A15349	A 15349 M12	HM565675	None			L10V, I13V, E35D, M36I, R41K, H69K, K70R, L89M	CRF01_AE
	A14757	A 14757 M18	HM565676	None			I13V, I15V, G16E, E35D, M36I, R41K, L63C, H69K	CRF01_AE
	A14652	A 14652 M18	HM565678	None			L10I, I13V, K14R, G16E, E35D, M36I, R41K, R57K, H69K, K70R, L89M	CRF01_AE
	A13955	A 13955 M18	HM565679	None			L10I, I13V, I15V, E35D, M36I, R41K, H69K, L89M, L97I	CRF01_AE
		A 13955 M24	HM565629	None			L10I, I13V, I15V, E35D, M36I, R41K, I62IV, H69K, L89M, L97I	CRF01_AE
	A15195	A 15195 M12	HM565681	None			I13V, K20R, E35D, M36I, R41K, R57K, H69K, L89M	CRF01_AE
	A14006	A 14006 M24	HM565682	None		L10FV	I13V, G16E, E35D, M36I, N37NI, R41K, H69K, K70KR, L89M	CRF01_AE
	A13768	A 13768 M24	HM565683	None			L10I, I13V, G16E, E35D, M36I, R41K, L63C, H69K, L89M	CRF01_AE
	A14493	A 14493 M18	HM565685	None			E35D, M36I, R41K, I62IV, H69K, V77VI, V82I, L89M	CRF01_AE
		A 14493 M24	HM565623	None			E35D, M36I, R41K, I62IV, H69K, V82VI, L89M	CRF01_AE
	A15615	A 15615 M6	HM565687	None			L10V, I13V, G16E, E35D, M36I, R41K, Q61E, H69K, K70R, L89M	CRF01_AE
		A 15615 M12	HM565614	None			L10V, I13V, G16E, E35D, M36I, R41K, Q61E, H69K, K70R, L89M	CRF01_AE
	A15274	A 15274 M12	HM565690	None			I13V, I15V, E35D, M36I, R41K, H69K, V82I, L89M	CRF01_AE
		A 15274 M18	HM565613	None			I13V, I15V, K20KR, E35D, M36I, R41K, H69K, V82I, L89M, L97LF	CRF01_AE
	A15294	A 15294 M6	HM565692	None			I13V, E35D, M36I, R41K, H69K, P79PS, L89M	CRF01_AE
		A 15294 M12	HM565618	None			I13V, E35D, M36I, R41K, H69K, P79PS, L89M	CRF01_AE
	A15442	A 15442 M6	HM565693	None			L10V, I13V, G16E, E35D, M36I, R41K, L63C, H69K, K70R, L89M	CRF01_AE
	A14643	A 14643 M12	HM565694	None			L10V, I13V, G16E, E35D, M36I, R41K, H69K, K70KR, L89M	CRF01_AE
		A 14643 M18	HM565617	None			L10LV, I13V, G16E, E35D, M36I, R41K, H69K, K70KR, L89M	CRF01_AE
	A15254	A 15254 M6	HM565697	None			I13IV, G16A, E35D, M36I, R41K, H69K, L89M	CRF01_AE
		A 15254 M12	HM565619	None			G16A, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	A13524	A 13524 M12	HM565698	None			K14R, K20R, E35D, M36I, N37D, R41K, L63P, H69K, K70KR, L89M, I93L, G94GDNS	CRF01_AE
		A 13524 M24	HM565631	None			K14R, K20R, E35D, M36I, N37D, R41K, K43KR, L63PS, H69K, K70KR, L89M, I93L	CRF01_AE
	A13748	A 13748 M18	HM565699	None			L10I, I13V, E35D, M36I, R41K, L63T, H69K, L89M	CRF01_AE
		A 13748 M24	HM565637	None			L10I, I13V, E35D, M36I, R41K, K55KR, L63T, H69K, L89M	CRF01_AE
	A13412	A 13412 M18	HM565700	None			L10I, I13V, G16E, K20I, E35D, M36I, R41K, H69K, K70G, V77I, L89M	CRF01_AE
	A14971	A 14971 M6	HM565701	None			I13V, E35D, M36I, R41K, L63C, H69K, L89M	CRF01_AE
		A 14971 M12	HM565620	None			I13V, E35D, M36I, R41K, L63C, H69K, L89M	CRF01_AE
	A14843	A 14843 M6	HM565703	None			I13V, L33LV, E35D, M36I, R41K, H69K, L89M	CRF01_AE
		A 14843 M12	HM565674	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	A15125	A 15125 M6	HM565704	None			G17D, K20R, E35D, M36I, R41K, I62V, L63P, H69K, I72V, L89M	CRF01_AE
	A13655	A 13655 M18	HM565705	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
		A 13655 M24	HM565634	None			P9ST, I13IV, K20R, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	A15239	A 15239 M6	HM565706	None			L19I, E35D, M36I, R41K, L63C, H69K, L89M	CRF01_AE
		A 15239 M12	HM565640	None			L19I, E35D, M36I, R41K, L63C, H69K, L89M	CRF01_AE
		A 15239 M18	HM565639	None			L19I, E35D, M36I, R41K, L63C, H69K, K70KR, L89LM	CRF01_AE
	A13861	A 13861 M6	HM565707	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
		A 13861 M12	HM565635	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	A13143	A 13143 M6	HM565708	None			I13V, E35D, M36I, R41K, K45KR, H69K, K70R, I72IT, L89M	CRF01_AE
	A14998	A 14998 M6	HM565709	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	A14708	A 14708 M6	HM565710	None			I13V, E35D, M36I, R41K, K45R, L63LAPV, H69K, L89M	CRF01_AE
		A 14708 M12	HM565645	None			I13V, E35D, M36I, R41K, K45R, L63A, H69K, L89M, N98ND	CRF01_AE
		A 14708 M18	HM565644	None			I13V, E35D, M36I, R41K, K45R, L63A, H69K, L89M	CRF01_AE
	A14207	A 14207 M12	HM565711	None			L10I, I13V, I15IV, G16GE, E35D, M36I, R41K, H69K, K70KR, L89M, L97I	CRF01_AE
		A 14207 M18	HM565651	None			L10I, I13V, G16E, E35D, M36I, R41K, H69K, K70R, L89M, L97I	CRF01_AE
		A 14207 M24	HM565650	None			L10I, I13V, G16E, E35D, M36I, R41K, H69K, K70R, L89M, L97I	CRF01_AE
	A14040	A 14040 M18	HM565712	None			I13V, E35D, M36I, R41K, L63P, H69K, L89M	CRF01_AE
		A 14040 M24	HM565656	None			I13V, E35D, M36I, R41K, L63P, H69K, L89M	CRF01_AE
		A 14040 M30	HM565655	None			I13V, E35D, M36I, R41K, L63P, H69K, L89M	CRF01_AE
	A14549	A 14549 M18	HM565713	None			L10I, I13V, E35D, M36I, R41K, L63T, H69K, L89M	CRF01_AE
	A13584	A 13584 RS	HM565716	None			E35D, M36I, R41K, L63LP, H69K, V82VI, L89M	CRF01_AE
	A13557	A 13557 RS	HM565717	None			L10I, I13V, G16GE, E35D, M36I, R41K, H69K, L89M	CRF01_AE
		A 13557 M24	HM565657	None			L10I, I13V, G16E, L19LP, E35D, M36I, R41K, K43R, H69K, L89M	CRF01_AE
		A 13557 M30	HM565654	None			L10I, I13V, G16E, E35D, M36I, R41K, K43R, H69K, L89M	CRF01_AE
	A12984	A 12984 RS	HM565718	None			L10LI, I13V, E35D, M36I, R41K, I64IV, H69K, L89M	CRF01_AE
		A 12984 M12	HM565638	None			L10LI, I13V, E35D, M36I, R41K, I64IV, H69K, L89M	CRF01_AE
	A14109	A 14109 RS	HM565720	None			I13V, E35D, M36I, K45R, R57K, L63T, H69K, L89M, T91V	CRF01_AE
		A 14109 M18	HM565627	None			I13V, G16GE, E35D, M36I, K45R, R57K, L63T, H69K, L89M, T91V	CRF01_AE
	A14438	A 14438 RS	HM565721	None			I13V, G17E, E35D, M36I, R41K, L63C, H69K, L89M	CRF01_AE
		A 14438 M18	HM565647	None			I13V, G17E, E35D, M36IL, N37NS, R41K, L63C, H69K, L89M	CRF01_AE
		A 14438 M24	HM565646	None			I13V, G17E, E35D, M36I, R41K, L63C, H69K, K70KR, L89M	CRF01_AE
	A13910	A 13910 RS	HM565727	None			L10I, I13V, G16GE, E35D, M36I, N37ND, R41K, L63I, H69K, L89M	CRF01_AE
		A 13910 M18	HM565630	None			L10I, I13V, G16E, E35D, M36I, R41K, L63I, H69K, L89M	CRF01_AE
	A14127	A 14127 RS	HM565728	None			I13V, G16E, K20R, E35D, M36I, R41K, H69K, L89M	CRF01_AE
		A 14127 M18	HM565626	None			I13V, G16E, K20R, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	A13472	A 13472 RS	HM565729	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
		A 13472 M18	HM565632	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	A14435	A 14435 M12	HM565649	None			L10I, I13V, E35D, M36I, R41K, L63S, H69K, L89M	CRF01_AE
		A 14435 M18	HM565648	None			L10I, I13V, E35D, M36I, R41K, L63S, H69K, L89M	CRF01_AE
	A12757	A 12757 RS	HM565731	None			L10LI, I13V, G16GE, E35D, M36I, R41K, L63C, H69K, L89M	CRF01_AE
		A 12757 M24	HM565643	None			L10I, I13V, G16E, E35D, M36I, R41K, L63C, H69K, L89M	CRF01_AE
	A12500	A 12500 RS	HM565732	None			I13V, E35D, M36I, R41K, K45R, L63P, H69K, K70R, L89M	CRF01_AE
		A 12500 M30	HM565663	None			I13V, E35D, M36I, R41K, K45R, L63P, H69K, K70R, L89M	CRF01_AE
	A13822	A 13822 RS	HM565733	None			I15V, E35D, M36I, R41K, H69K, V82VI, L89M, I93L	CRF01_AE
		A 13822 M24	HM565636	None			I15V, E35D, M36I, R41K, H69K, V82VI, L89M, I93L	CRF01_AE
	A14705	A 14705 BL	HM565734	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	A14063	A 14063 RS	HM565735	None			I13V, L19LM, E35D, M36I, R41K, R57K, H69K, K70R, L89M	CRF01_AE
		A 14063 M18	HM565653	None			I13V, L19LM, E35D, M36I, R41K, R57K, H69K, K70R, L89M	CRF01_AE
		A 14063 M24	HM565652	None			I13V, L19LM, E35D, M36I, R41K, R57K, H69K, K70R, L89M	CRF01_AE
	A14428	A 14428 RS	HM565737	None			L10I, I13V, E35D, M36I, R41K, L63LP, H69K, L89M	CRF01_AE
	A12589	A 12589 RS	HM565738	None			E35D, M36I, R41K, R57K, G68GE, H69K, L89M	CRF01_AE
		A 12589 M42	HM565662	None			E35D, M36I, R41K, R57K, H69K, L89M	CRF01_AE
Aghokeng (2011)	SK7004-PI	SK7004-PI	HQ864344	None			I13V, K14KR, E35D, M36I, R41K, D60E, H69K, I72V, L89M, I93L	CRF01_AE
Avi (2011)	086u	086u	GQ926649	None			L10I, I13V, K14R, E35D, M36I, R41K, D60E, L63T, I64L, H69K, L89M, I93L	CRF01_AE
Bontell (2011)	Pat057	08.VL740Hi	HQ852859	None			I13V, E35D, M36I, R41K, R57K, H69K, L89M	CRF01_AE
	Pat053	08.VL763Hs	HQ852863	None			I13V, G16E, K20KI, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	Pat051	08.VL765Hs	HQ852865	None			T12P, K14R, G16E, E35D, M36I, R41K, L63S, H69K, L89M	CRF01_AE
	Pat050	08.VL766Hi	HQ852866	None			L10I, I13V, G16E, E35D, M36I, R41K, H69K, I72V, L89M, T91I	CRF01_AE
	Pat049	08.VL767Hs	HQ852867	None			G16E, K20KI, E35D, M36I, P39PS, R41K, I62IV, L63C, H69K, T74S, L89M	CRF01_AE
	Pat048	08.VL768Hs	HQ852868	None			L10V, I13V, K14R, G16E, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	Pat047	08.VL770H	HQ852869	None			I13V, K20R, E35D, M36I, R41K, L63P, H69K, L89M	CRF01_AE
	Pat046	08.VL771Hs	HQ852870	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	Pat045	08.VL772Hs	HQ852871	None			L10I, I13V, G16E, L19LI, E35D, M36I, R41K, L63T, H69K, L89I	CRF01_AE
	Pat044	08.VL773Hs	HQ852872	None			I13V, G16E, K20R, E35D, M36I, P39T, R41K, I62V, H69K, L89M	CRF01_AE
	Pat043	08.VL775Hi	HQ852873	None			E35D, M36I, R41K, H69K, L89M	CRF01_AE
	Pat040	08.VL778Hi	HQ852876	None			I13V, K14R, G16E, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	Pat038	08.VL782Ui	HQ852878	None			I13V, K20I, E35D, M36I, R41K, D60E, Q61E, L63P, H69K, V82I, L89M	CRF01_AE
	Pat037	08.VL783Us	HQ852879	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	Pat036	08.VL784Ui	HQ852880	None			I13V, G16E, Q18E, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	Pat034	08.VL787U	HQ852882	None			L10V, I13V, G16E, E35D, M36I, R41K, H69K, I72V, L89M	CRF01_AE
	Pat033	08.VL788Ui	HQ852883	None			E35D, M36I, R41K, H69K, L89M	CRF01_AE
	Pat031	09.VL790Yi	HQ852885	None			L10V, I13V, G16E, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	Pat030	09.VL840Yi	HQ852886	None			G16E, K20R, E35D, M36I, R41K, H69K, L89M, I93L	CRF01_AE
	Pat029	09.VL946Hi	HQ852887	None			I13V, G16E, E35D, M36I, R41K, H69K, K70R, L89M	CRF01_AE
	Pat028	09.VL947Hs	HQ852888	None			G16E, E35D, M36I, P39PS, L63C, H69K, L89M	CRF01_AE
	Pat027	09.VL948Hi	HQ852889	None			L10I, I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	Pat026	09.VL949Hs	HQ852890	None			I13V, E35D, M36I, R41K, K45R, R57K, H69K, V82I, L89M	CRF01_AE
	Pat025	09.VL951Hi	HQ852891	None			I13V, E35D, M36I, R41K, K45R, L63P, H69K, L89M	CRF01_AE
	Pat024	09.VL952Hi	HQ852892	None			I13V, G16E, E35D, M36I, R41K, H69K, I72V, L89M	CRF01_AE
	Pat023	09.VL953Hi	HQ852893	None			L10V, I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	Pat022	09.VL954Hs	HQ852894	None			I15V, E35D, M36I, R41K, L63P, H69K, L89M, I93L	CRF01_AE
	Pat020	09.VL956Hi	HQ852896	None			L10V, I13V, G16E, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	Pat019	09.VL957Hs	HQ852897	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	Pat018	09.VL958Hs	HQ852898	None			E35D, M36I, N37D, R41K, H69K, L89M	CRF01_AE
	Pat017	09.VL960Hs	HQ852899	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	Pat016	09.VL963H	HQ852900	None			L10LI, I13V, E35D, M36I, N37D, R41K, H69K, K70R, L89IM	CRF01_AE
	Pat011	09.VL972U	HQ852905	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	Pat010	09.VL973Us	HQ852906	None			L10LI, I13V, G16E, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	Pat009	09.VL975Us	HQ852907	None			L10LI, I13V, E35D, M36I, N37D, R41K, H69K, K70R, L89IM	CRF01_AE
	Pat007	09.VL978Ui	HQ852909	None			I13V, G16E, E35D, M36I, R41K, R57RK, H69K, K70KR, L89M	CRF01_AE
	Pat006	09.VL982Ui	HQ852910	None			I13IV, I15V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	Pat003	09.VL985Ui	HQ852913	None			I15V, G16E, E35D, M36I, R41K, L63C, H69K, T74S, L89M, I93L	CRF01_AE
	Pat002	09.VL986U	HQ852914	None			I13V, G16E, E35D, M36I, R41K, I62IV, H69K, K70R, V82VI, L89M	CRF01_AE
Bunupuradah (2011)	079-008-005	079-008-005Pr		None			L10V, I13V, K14R, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	079-008-008	079-008-008Pr		None			L10V, T12P, I13V, I15V, G16E, E35D, M36I, R41K, R57K, Q61E, H69K, K70R, L89M	CRF01_AE
Charpentier (2011)	68	CP 001 630		None			L10LV, T12TA, I13IMV, K14KR, I15IV, G16AE, E35D, M36I, N37D, R41K, D60DE, Q61QEGR, L63X, C67CDGY, H69K, K70KR, I72IATV, L89M	CRF01_AE
Dean (2011)	IVVI0024	IVVI0024	JQ312330	None			I13V, G16E, E35D, M36I, R41K, I62IV, H69K, K70R, L89M	CRF01_AE
	IVVI0034	IVVI0034	JQ312331	None			I13V, K20KR, E35D, M36I, R41K, L63LP, H69K, L89M	CRF01_AE
	IVVI0053	IVVI0053	JQ312333	None			E35D, M36I, R41K, Y59F, L63P, H69K, L89M, I93L	CRF01_AE
	IVVI0054	IVVI0054	JQ312334	None			I13V, G16E, E35D, M36I, R41K, K45R, L63LP, H69K, L89M	CRF01_AE
	IVVI0058	IVVI0058	JQ312335	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	IVVI0073	IVVI0073	JQ312336	None			I13V, E35D, M36I, R41K, K45R, H69K, L89M	CRF01_AE
	IVVI0100	IVVI0100	JQ312338	None			L10V, I13V, K14R, Q18H, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	IVVI0112	IVVI0112	JQ312339	None			I13V, G16E, E35D, M36I, R41K, K45R, H69K, L89M	CRF01_AE
	IVVI0116	IVVI0116	JQ312341	None			I13V, E35D, M36I, N37D, R41K, R57K, H69K, L89M	CRF01_AE
	IVVI0121	IVVI0121	JQ312343	None			G16E, L33LV, E35D, M36I, G40GE, R41K, R57K, D60E, Q61E, H69K, L89M, I93L	CRF01_AE
	IVVI0127	IVVI0127	JQ312344	None			I13V, E35D, M36I, R41K, L63LP, H69K, L89M	CRF01_AE
	IVVI0128	IVVI0128	JQ312345	None			I13IV, E35D, M36I, R41K, K45KR, I62IV, H69K, V82VI, L89M, I93IL	CRF01_AE
	IVVI0130	IVVI0130	JQ312346	None			T12P, I13V, K14R, E35D, M36I, P39S, R41K, L63P, C67CY, H69K, L89M	CRF01_AE
	IVVI0145	IVVI0145	JQ312348	None			L10LI, I13IV, K14R, E35D, M36I, R41K, H69K, L89M, I93L	CRF01_AE
	IVVI0146	IVVI0146	JQ312349	None			I13IV, E35D, M36I, R41K, L63LP, H69K, L89M	CRF01_AE
	IVVI0174	IVVI0174	JQ312352	None			I13IV, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	IVVI0186	IVVI0186	JQ312355	None			I13V, E35D, M36I, R41K, L63LP, H69K, L89M	CRF01_AE
	IVVI0189	IVVI0189	JQ312357	None			G16E, E35D, M36I, R41K, R57K, D60E, Q61E, H69K, L89M, I93L	CRF01_AE
	IVVI0190	IVVI0190	JQ312358	None			K14R, I15V, G16E, E35D, M36I, R41K, R57K, H69K, I72IV, L89M, I93L	CRF01_AE
	IVVI0198	IVVI0198	JQ312360	None			K14R, I15V, G16AE, E35D, M36I, R41K, R57K, H69K, I72IV, L89M, I93L	CRF01_AE
	IVVI0199	IVVI0199	JQ312361	None			T4TI, L5LF, E35D, M36I, R41K, H69K, L89M, I93L	CRF01_AE
	IVVI0259	IVVI0259	JQ312362	None			T12P, I13V, K14R, Q18H, E35D, M36I, P39S, R41K, L63T, H69K, V82VI, L89M	CRF01_AE
	IVVI0287	IVVI0287	JQ312363	None			I13V, E35D, M36I, R41K, I62IV, H69K, L89M	CRF01_AE
	IVVI0297	IVVI0297	JQ312364	None			I13V, L19M, E35D, M36I, R41K, H69K, V82VI, L89M	CRF01_AE
	IVVI0312	IVVI0312	JQ312365	None			I13V, G16E, K20KR, E35D, M36I, R41K, L63G, H69K, L89M	CRF01_AE
	IVVI0334	IVVI0334	JQ312366	None			I13V, G16E, K20KR, E35D, M36I, R41K, L63G, H69K, L89M	CRF01_AE
	IVVI0337	IVVI0337	JQ312367	None			T12P, I13V, K14R, Q18H, E35D, M36I, P39S, R41K, L63T, H69K, L89M	CRF01_AE
	IVVI0348	IVVI0348	JQ312368	None			E35D, M36I, R41K, Q61QE, L63PS, H69K, L89M, I93L	CRF01_AE
	IVVI1862	IVVI1862	JQ312370	None			L10I, I13V, E35D, M36I, R41K, H69K, L89IM	CRF01_AE
	IVVI1869	IVVI1869	JQ312371	None			I13V, E35D, M36I, R41K, R57K, H69K, L89M	CRF01_AE
	IVVI1927	IVVI1927	JQ312373	None			L10I, I13V, K14KE, G16E, E35D, M36I, R41K, L63C, C67CY, H69K, L89M	CRF01_AE
	IVVI1928	IVVI1928	JQ312374	None			L10I, I13V, K14KR, G16GE, E35D, M36I, R41K, L63C, E65ED, H69K, K70KR, L89M	CRF01_AE
	IVVI1933	IVVI1933	JQ312376	None			L10I, I13V, G16E, E35D, M36I, R41K, L63C, E65ED, C67CY, H69K, L89M	CRF01_AE
	IVVI1970	IVVI1970	JQ312377	None			E35D, M36I, R41K, L63LP, H69K, L89M, I93L	CRF01_AE
	IVVI1980	IVVI1980	JQ312378	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	IVVI1990	IVVI1990	JQ312380	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	IVVI2003	IVVI2003	JQ312382	None			I13V, K14KR, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	IVVI2028	IVVI2028	JQ312383	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	IVVI2073	IVVI2073	JQ312385	None			I13V, G16E, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	IVVI2074	IVVI2074	JQ312386	None			I13V, G16GA, E35D, M36I, R41K, K45KR, R57RK, H69K, L89M	CRF01_AE
	IVVI2077	IVVI2077	JQ312387	None			I13V, I15V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	IVVI2129	IVVI2129	JQ312389	None			I13V, G16E, E35D, M36I, R41K, H69K, L89M, Q92QK, I93IL	CRF01_AE
	IVVI2133	IVVI2133	JQ312390	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	IVVI2148	IVVI2148	JQ312391	None			I15IV, E35D, M36I, R41K, L63LI, H69K, L89M	CRF01_AE
	IVVI3786	IVVI3786	JQ312393	None			K14R, G16E, E35D, M36I, R41K, L63C, H69K, L89M	CRF01_AE
	IVVI5275	IVVI5275	JQ312395	None			L10I, G16E, E35D, M36I, R41K, L63C, H69K	CRF01_AE
	IVVI5295	IVVI5295	JQ312396	None			L10IV, I13V, G16E, E35D, M36I, R41K, H69K, K70R, L89M	CRF01_AE
	IVVI5393	IVVI5393	JQ312397	None			G16E, E35D, M36I, P39PT, R41K, L63C, H69K, L89M, I93IL	CRF01_AE
	IVVI5455	IVVI5455	JQ312398	None		K43KT	I15V, G16E, E35D, M36I, R41K, L63C, H69K, L89M, I93L	CRF01_AE
	IVVI5543	IVVI5543	JQ312399	None			I15IV, G16E, K20R, E35D, M36I, R41K, L63C, H69K, L89M, I93L	CRF01_AE
	IVVI5575	IVVI5575	JQ312400	None			G16E, E35D, M36I, R41K, L63C, H69K, L89LM, I93L	CRF01_AE
	IVVI7005	IVVI7005	JQ312401	None			G16E, E35D, M36I, R41K, L63P, H69K, K70R, L89M, I93L	CRF01_AE
	IVVI7074	IVVI7074	JQ312402	None			G16E, K20I, E35D, M36I, L63C, H69K, L89M	CRF01_AE
	IVVI7090	IVVI7090	JQ312403	None			G16E, E35D, M36I, R41K, R57K, I62V, L63C, H69K, L89M	CRF01_AE
	IVVI7117	IVVI7117	JQ312404	None		I84IM	I13V, G16A, E35D, M36I, N37D, R41K, H69K, L89M	CRF01_AE
	IVVI7118	IVVI7118	JQ312405	None			I13V, G16AE, K20KR, E35D, M36I, N37ND, R41K, K45KR, H69K, K70KR, I72IR, L89M	CRF01_AE
	IVVI7133	IVVI7133	JQ312406	None			I13IV, G16A, E35D, M36I, N37ND, R41K, K43KR, L63CR, H69K, K70KR, V82VI, L89M, I93IL	CRF01_AE
	IVVI7155	IVVI7155	JQ312407	None			G16E, E35D, M36I, R57RK, L63C, H69K, L89M	CRF01_AE
	IVVI7201	IVVI7201	JQ312409	None			G16E, E35D, M36I, R57K, L63C, H69K, L89M	CRF01_AE
	IVVI7223	IVVI7223	JQ312410	None			G16E, E35D, M36I, R41K, L63C, H69K, L89M	CRF01_AE
	IVVI7232	IVVI7232	JQ312411	None			K20R, E35D, M36I, R41K, R57K, H69K, L89M, I93IL	CRF01_AE
	IVVI7239	IVVI7239	JQ312412	None			G16E, E35D, M36I, R41K, L63C, H69K, L89M, I93L	CRF01_AE
	IVVI7247	IVVI7247	JQ312413	None			G16E, K20KR, E35D, M36I, R41K, R57RK, I62IM, L63C, E65ED, H69K, K70KR, L89M	CRF01_AE
	IVVI7272	IVVI7272	JQ312414	None			G16E, E35D, M36I, R41K, L63C, H69K, L89M, I93L	CRF01_AE
	IVVI7283	IVVI7283	JQ312415	None			I13V, G16A, E35D, M36I, N37D, R41K, R57K, G68GE, H69K, K70R, L89I	CRF01_AE
	IVVI7292	IVVI7292	JQ312416	None			G16E, K20R, E35D, M36I, R41K, K45KR, L63C, H69K, L89LM, I93L	CRF01_AE
	IVVI7359	IVVI7359	JQ312418	None			I13V, G16A, E35D, M36I, N37D, R41K, K45R, L63P, H69K, K70R, L89M	CRF01_AE
	IVVI7392	IVVI7392	JQ312420	None			I13V, G16A, E35D, M36I, N37D, R41K, R57K, G68GE, H69K, K70R, L89I	CRF01_AE
Fokam (2011)	CIRCB-10232	CIRCB-10232	JQ796129	None			I13V, K14Q, G17E, K20I, E34KT, E35D, M36I, R41RK, R57K, Q61H, L63I, I64M, H69C, K70R, I72E, P79PL, L89M	CRF01_AE
Hamers (2011)	CP076301528	CP076301528	HQ993574	None			I13V, E35D, M36I, R41K, R57K, L63P, H69K, L89M	CRF01_AE
	CP076301535	CP076301535	HQ993579	None			L10I, I13V, I15V, E35D, M36I, R41K, R57K, C67Y, H69K, L89M	CRF01_AE
	CP076301558	CP076301558	HQ993600	None			E35D, M36I, N37ND, R41K, R57K, D60E, I62V, L63P, C67CY, H69K, K70KR, L89M	CRF01_AE
	CP076301574	CP076301574	HQ993614	None			I3L, L10I, I13V, G16E, E35D, M36I, R41K, I62V, L63V, G68E, H69K, T74A, L89M, T91V, I93L	CRF01_AE
	CP076301580	CP076301580	HQ993619	None			I13V, G16E, K20R, E35D, M36I, R41K, R57K, I62V, E65D, H69K, L89M	CRF01_AE
	CP076301591	CP076301591	HQ993629	None		L33F	L10V, E35D, M36I, N37D, R41K, K45R, R57K, Q61H, L63P, H69K, I72IT, I85V, L89M	CRF01_AE
	CP076301678	CP076301678	HQ993674	None			I13V, E35D, M36I, R41K, K45R, R57RK, H69K, L89M	CRF01_AE
	CP076301725	CP076301725	HQ993718	None			I13V, I15V, E35D, M36I, R41K, R57K, H69K, L89M	CRF01_AE
	CP076301774	CP076301774	HQ993760	None			I13V, G16E, K20R, E35D, M36I, R41K, K45KR, R57K, L63S, H69K, I72T, L89M	CRF01_AE
	CP076302290	CP076302290	HQ993839	None			I13V, E35D, M36I, N37D, R41K, R57K, D60E, H69K, L89M	CRF01_AE
	CP076300882	CP076300882	HQ995135	None			I13V, I15V, E35D, M36I, R41K, R57K, L63P, H69K, K70R, L89M	CRF01_AE
	CP076303050	CP076303050	HQ995233	None			I13V, I15V, K20R, E35D, M36I, R41K, R57K, H69K, K70R, L89M	CRF01_AE
	CP076303072	CP076303072	HQ995252	None			L10I, I13V, K14R, G16E, E35D, M36I, R41K, R57K, H69Q, K70R, L89M	CRF01_AE
	CP076303092	CP076303092	HQ995269	None			L10I, I13V, G16E, K20R, E35D, M36I, R41K, R57K, H69K, K70R, I72IV, L89M	CRF01_AE
	CP076303110	CP076303110	HQ995286	None			I13V, K14R, E35D, M36I, R41K, R57K, H69K, L89M	CRF01_AE
	CP076303119	CP076303119	HQ995294	None			L10I, I13V, G16A, E35D, M36I, R41K, L63P, H69K, K70R, L89M	CRF01_AE
	CP076300748	CP076300748	HQ995328	None			I13IV, G16GE, E35D, M36I, R41K, K45R, R57K, H69K, L89M	CRF01_AE
	CP076300763	CP076300763	HQ995335	None			I13V, G16E, K20I, E35D, M36I, R41K, R57K, D60E, H69K, L89M	CRF01_AE
	CP076300792	CP076300792	HQ995356	None			T12S, I13V, L19I, E35D, M36I, R41K, R57K, L63P, H69K, L89M	CRF01_AE
	CP076301920	CP076301920	HQ995392	None			I13V, E35D, M36I, R41K, R57K, L63P, I64M, H69K, L89I	CRF01_AE
	CP076301969	CP076301969	HQ995433	None			I13IV, E35D, M36I, N37D, R41K, K45R, R57K, L63P, H69K, L89M	CRF01_AE
	CP076302930	CP076302930	HQ995487	None			I13V, G16E, K20R, E35D, M36I, R41K, R57K, H69K, K70R, I72V, L89M	CRF01_AE
Kao (2011)	Pat338	26584	HQ657702	None			I13V, I15V, L19M, E35D, M36I, R41K, H69K, V77I, L89M	CRF01_AE
	Pat285	27003	HQ657755	None			I13V, G16E, K20R, E35D, M36I, N37ND, R41K, R57RK, I62V, H69K, V77I, L89M	CRF01_AE
	Pat254	27309	HQ657786	None			G16E, E35D, M36I, R41K, L63C, H69K, K70R, L89M	CRF01_AE
	Pat250	27347	HQ657790	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	Pat226	27956	HQ657814	None			I15V, G16E, L19M, K20R, E35D, M36I, R41K, H69K, L89M, I93L	CRF01_AE
	Pat192	35816	HQ657848	None			I13IV, G16A, E35D, M36I, N37D, R41K, L63X, C67CY, H69K, K70R, V75VIM, L89M, I93IL	CRF01_AE
	Pat191	35822	HQ657849	None			I13V, L19M, E35D, M36I, R41K, K45R, L63LP, H69K, L89M	CRF01_AE
	Pat183	35886	HQ657857	None			I13V, I15V, E35D, M36I, R41K, H69K, K70R, L89M, I93L	CRF01_AE
	Pat134	36250	HQ657906	None			I13V, I15V, E35D, M36I, R41K, H69K, K70R, L89M	CRF01_AE
	Pat130	36267	HQ657910	None			L10V, I13V, G16E, E35D, M36I, N37K, R41K, L63C, H69K	CRF01_AE
	Pat056	36568	HQ657984	None			I13V, K20R, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	Pat048	36629	HQ657992	None			I13V, I15IV, E35D, M36I, R41K, Q61E, H69K, L89M	CRF01_AE
	Pat044	36636	HQ657996	None			I13V, E35D, M36I, R41K, H69K, K70KR, I72V, I85IM, L89M	CRF01_AE
Kasang (2011)	2027	2027	HM572415	None			I13V, K14R, I15IV, G16GE, E35D, M36IV, R41K, R57K, H69K, L89M	CRF01_AE
	23289	23289	HM572422	None			I13V, I15V, E35D, M36I, R41K, R57K, Q58QR, H69K, G86GR, L89M	CRF01_AE
Lazaro (2011)	AG-M2	AG-M2	HQ542613	None		V11I	I13V, G16E, K20I, E35D, M36L, R41K, Q61E, H69K, K70R, L89M, I93L	CRF01_AE
	AG-M4	AG-M4	HQ542615	None			I13V, I15V, E35D, M36I, R41K, I62IV, L63Q, H69K, L89M	CRF01_AE
	AG-M9	AG-M9	HQ542619	None			W6WG, I13V, E35D, M36I, N37ND, R41RK, R57RK, H69K, V82I, L89M	CRF01_AE
	AG-M17	AG-M17	HQ542627	None			I13V, G16E, E35D, M36I, R41K, H69K, K70R, L89M	CRF01_AE
	VT-M9	VT-M9	HQ542638	None			I13V, E35D, M36IT, R41K, L63P, H69K, K70R, A71V, L89M, I93L	CRF01_AE
	VT-M18	VT-M18	HQ542646	None			L10V, I13V, G16A, K20R, E35D, M36I, N37D, R41K, K43KR, L63C, H69K, K70KR, L89M	CRF01_AE
	DN-M1	DN-M1	HQ542654	None			G16E, K20KR, E35D, M36I, R41K, H69K, K70KR, L89M	CRF01_AE
	TG-M7	TG-M7	HQ542677	None			I13V, G16E, E35D, M36I, R41K, K45R, H69K, L89M	CRF01_AE
	TG-M9	TG-M9	HQ542679	None			I13V, G16E, K20KI, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	DT-M5	DT-M5	HQ542693	None			L10LI, I13V, G16A, E35D, M36I, N37D, R41K, H69K, K70R, L89M	CRF01_AE
	AG-M3	AG-M3	HQ542614	None			I13V, E35D, M36I, R41K, R57K, I62IV, H69K, L89M	CRF01_AE
	AG-M5	AG-M5	HQ542616	None			I13V, K20KR, E35D, M36I, R41K, H69K, I72IM, L89M	CRF01_AE
	AG-M7	AG-M7	HQ542617	None			I13V, E35D, M36I, R41K, K43R, L63C, H69K, V82VI, L89M	CRF01_AE
	AG-M8	AG-M8	HQ542618	None			I13V, E35D, M36I, R41K, R57RK, L63LP, H69K, L89M	CRF01_AE
	AG-M11	AG-M11	HQ542621	None			I15V, E35D, M36I, R41K, L63AV, H69K, L89M, I93IL	CRF01_AE
	AG-M14	AG-M14	HQ542624	None			I13V, I15V, E35D, M36I, R41K, H69K, V82VI, L89M	CRF01_AE
	AG-M16	AG-M16	HQ542626	None			I13V, E35D, M36I, R41K, D60E, H69K, L89M	CRF01_AE
	AG-M18	AG-M18	HQ542628	None			I13V, K20KR, E35D, M36I, R41K, H69K, L89M, T91TI	CRF01_AE
	AG-M19	AG-M19	HQ542629	None			I13IV, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	AG-M21	AG-M21	HQ542630	None			I13V, E35D, M36I, R41K, H69K, L89M, T91V	CRF01_AE
	AG-M23	AG-M23	HQ542631	None			G16E, K20R, E35D, M36I, R41K, H69K, L89M, I93L	CRF01_AE
	AG-M24	AG-M24	HQ542632	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	VT-M3	VT-M3	HQ542635	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	VT-M4	VT-M4	HQ542636	None		T74TP	I13IV, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	VT-M8	VT-M8	HQ542637	None			I15V, G16E, K20R, E35D, M36I, R41K, L63C, H69K, I93L	CRF01_AE
	VT-M10	VT-M10	HQ542639	None			L10PR, G16E, E35D, M36I, R41K, L63C, H69K	CRF01_AE
	VT-M12	VT-M12	HQ542640	None			L10V, I13IV, I15IV, G16E, E35D, M36I, R41K, L63C, H69K, L89LM	CRF01_AE
	VT-M13	VT-M13	HQ542641	None			L10V, I13V, G16E, K20R, E35D, M36I, R41K, L63C, H69K, L89M	CRF01_AE
	VT-M14	VT-M14	HQ542642	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	VT-M15	VT-M15	HQ542643	None			L10V, I13V, G16E, E35D, M36I, R41K, L63C, H69K, L89M	CRF01_AE
	VT-M16	VT-M16	HQ542644	None			I13V, G16A, E35D, M36I, N37D, R41K, I62IM, H69K, K70R, L89M	CRF01_AE
	VT-M17	VT-M17	HQ542645	None			L10I, I13IV, G16E, E35D, M36I, R41K, R57K, L63C, H69Q	CRF01_AE
	VT-M19	VT-M19	HQ542647	None			G16E, E35D, M36I, R41K, L63C, H69K, V82VI, L89M, I93L	CRF01_AE
	VT-M20	VT-M20	HQ542648	None			L10V, I13IV, G16E, E35D, M36I, R41K, L63C, H69K	CRF01_AE
	VT-M21	VT-M21	HQ542649	None			G16E, E35D, M36I, L38G, R41K, L63C, H69K, L89M	CRF01_AE
	VT-M22	VT-M22	HQ542650	None			I13V, E35D, M36I, N37D, R41K, L63T, E65D, H69K, L89M	CRF01_AE
	VT-M23	VT-M23	HQ542651	None			G16E, E35D, M36I, R41K, L63C, H69K, L89M	CRF01_AE
	VT-M24	VT-M24	HQ542652	None			G16E, E35D, M36I, R41K, L63C, H69K, L89M, I93L	CRF01_AE
	VT-M25	VT-M25	HQ542653	None			I15V, G16E, E35D, M36I, R41K, L63C, H69K, L89M	CRF01_AE
	DN-M2	DN-M2	HQ542655	None			G16E, K20R, E35D, M36I, R41K, R57K, H69K, V75G, L89M	CRF01_AE
	DN-M4	DN-M4	HQ542657	None			G16E, E35D, M36I, R41K, I62V, L63H, H69K, L89M	CRF01_AE
	DN-M6	DN-M6	HQ542658	None			L10LV, I13V, G16E, E35D, M36I, R41K, H69K, K70R, L89M	CRF01_AE
	DN-M7	DN-M7	HQ542659	None			G16E, K20R, E35D, M36I, P39S, R41K, L63C, H69K, K70KR, L89M	CRF01_AE
	DN-M9	DN-M9	HQ542660	None			T12TA, I15V, G16E, E35D, M36IT, R41K, D60E, L63C, E65EQ, H69K, L89M, I93L	CRF01_AE
	DN-M10	DN-M10	HQ542661	None		T74TP	T12P, I15IV, G16E, D25DG, E35D, M36I, L63C, H69K, L89M	CRF01_AE
	DN-M12	DN-M12	HQ542663	None			G16E, K20KR, E35D, M36I, R41K, R57K, I62V, E65ED, H69K, L89M	CRF01_AE
	DN-M15	DN-M15	HQ542665	None			G16E, E35D, M36I, K45R, L63P, H69K, L89M, I93L	CRF01_AE
	DN-M21	DN-M21	HQ542668	None			L10I, G16E, E35D, M36I, P39S, R41K, L63C, H69K, L89M	CRF01_AE
	DN-M23	DN-M23	HQ542670	None			I13V, G16GE, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	DN-M24	DN-M24	HQ542671	None			I13IV, G16E, E35D, M36I, R41K, L63LV, H69K, L89M	CRF01_AE
	TG-M1	TG-M1	HQ542672	None			I13V, G16GE, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	TG-M2	TG-M2	HQ542673	None			G16E, K20KR, E35D, M36I, R41RK, R57K, L63C, H69K, L89M, I93IL	CRF01_AE
	TG-M4	TG-M4	HQ542674	None			I13V, G16E, E35D, M36I, R41K, R57K, Q61QE, H69K, K70R, I72V, L89M	CRF01_AE
	TG-M6	TG-M6	HQ542676	None			I13V, K14KR, Q18H, E35D, M36I, R41K, R57RK, L63PS, H69K, V77I, L89M	CRF01_AE
	TG-M8	TG-M8	HQ542678	None			G16A, K20R, E35D, M36I, N37DE, L63C, H69K, L89LM, I93L	CRF01_AE
	TG-M12	TG-M12	HQ542681	None			I13V, G16A, K20R, E35D, M36I, N37D, R41K, H69K, K70R, L89M	CRF01_AE
	TG-M14	TG-M14	HQ542682	None			I15V, G16E, E35D, M36I, R57RK, L63C, H69K	CRF01_AE
	TG-M15	TG-M15	HQ542683	None			I13V, I15V, G16E, E35D, M36I, R41K, H69K, L89M, Q92K	CRF01_AE
	TG-M17	TG-M17	HQ542685	None			L10I, I13V, G16E, E35D, M36I, R41K, K55N, L63C, H69K, L89M	CRF01_AE
	TG-M18	TG-M18	HQ542686	None			G16E, K20R, E35D, M36I, R41K, L63C, H69K	CRF01_AE
	TG-M20	TG-M20	HQ542687	None			I13V, G16A, E35D, M36I, N37D, R57RK, L63C, H69K, V82VI, L89M	CRF01_AE
	TG-M21	TG-M21	HQ542688	None			I13V, K20KR, E35D, M36I, R41K, K43KN, H69K, L89M	CRF01_AE
	TG-M23	TG-M23	HQ542689	None			I15V, K20R, E35D, M36I, N37D, R41K, H69K, V82VI, L89M, I93L	CRF01_AE
	TG-M24	TG-M24	HQ542690	None			I13V, G16A, E35D, M36I, N37D, L63C, H69K, V82VI, L89M	CRF01_AE
	DT-M1	DT-M1	HQ542691	None			L10LV, I13V, G16E, E35D, M36I, R41K, H69K, I72IV, L89M	CRF01_AE
	DT-M4	DT-M4	HQ542692	None			L10V, I13V, E35D, M36I, R41K, L63P, H69K, K70R, L89M	CRF01_AE
	DT-M8	DT-M8	HQ542694	None			I13V, I15V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	DT-M9	DT-M9	HQ542695	None			I13IV, I15V, E35D, M36I, R41K, R57K, L63P, H69K, L89M, T91TN, I93L	CRF01_AE
	DT-M10	DT-M10	HQ542696	None			I13V, I15V, E35D, M36I, R41K, R57K, L63V, I64M, H69K, L89M, I93L	CRF01_AE
	DT-M12	DT-M12	HQ542697	None			I13V, K14R, I15IV, E35D, M36I, R41K, R57K, L63C, H69K, L89M	CRF01_AE
	DT-M14	DT-M14	HQ542699	None			L10X, I13V, G16A, E35D, M36I, N37D, R41K, H69K, K70R, L89M	CRF01_AE
	DT-M15	DT-M15	HQ542700	None			G16E, E35D, M36I, R41K, K43R, L63C, H69K, L89M, I93L	CRF01_AE
	DT-M16	DT-M16	HQ542701	None			I13V, K14R, I15V, G16E, E35D, M36I, R41K, H69K, I72V, L89M	CRF01_AE
	DT-M17	DT-M17	HQ542702	None			G16E, E35D, M36I, R41K, L63C, H69K, L89M, I93L	CRF01_AE
	DT-M18	DT-M18	HQ542703	None			G16E, E35D, M36I, R41K, H69K, V82I, L89M, I93L	CRF01_AE
	DT-M19	DT-M19	HQ542704	None			I15IV, E35D, M36I, R41K, K43KN, R57K, H69K, L89M, I93L	CRF01_AE
	DT-M20	DT-M20	HQ542705	None			L10I, K14KR, E35D, M36I, R41K, D60DE, I62IV, L63C, H69Q, N88NK, L89M	CRF01_AE
	DT-M21	DT-M21	HQ542706	None			T12A, I13V, E35D, M36I, R41K, K45R, L63T, H69K, V82I, L89M	CRF01_AE
	DT-M24	DT-M24	HQ542707	None			I13V, I15IV, E35D, M36I, R41K, H69KR, L89M	CRF01_AE
	DT-M25	DT-M25	HQ542708	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
Ndembi (2011)	NTCPS729	NTCPS729	HQ702616	None			I13V, K14R, E35D, M36I, N37D, R41K, R57K, D60E, I62V, C67H, H69K, L89M	CRF01_AE
	NTCPS725	NTCPS725	HQ702621	None			I13V, G16E, K20R, E35D, M36I, R41K, R57K, H69K, K70R, L89M	CRF01_AE
	AICPS730	AICPS730	HQ702644	None			I13V, I15V, K20R, E35D, M36I, R41K, K45R, R57K, L63S, H69K, L89M	CRF01_AE
Ng (2011)	FREE008	FREE008	HQ539010	None		I50S	I13V, E35D, M36I, R57K, L63P, H69K, I72T, L89M	CRF01_AE
	FREE012	FREE012	HQ539013	None			E35D, M36I, R41K, H69K, L89M	CRF01_AE
	FREE019	FREE019	HQ539014	None			T12P, I13V, G16E, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	FREE026	FREE026	HQ539017	None			I13V, G16E, E35D, M36I, R41K, H69K, K70R, L89M	CRF01_AE
	FREE027	FREE027	HQ539018	None			I13V, E35D, M36I, R57K, H69K, V82I, L89M	CRF01_AE
	FREE033	FREE033	HQ539021	None			E35D, M36I, R41K, H69K, L89M	CRF01_AE
	FREE034	FREE034	HQ539022	None			I13V, G16E, K20R, E35D, M36I, R41K, H69K, K70R, L89M, T91V	CRF01_AE
	FREE038	FREE038	HQ539023	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	FREE059	FREE059	HQ539027	None			E35D, M36I, R41K, L63P, H69K, K70R, I72V, L89M	CRF01_AE
	FREE063	FREE063	HQ539029	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	FREE068	FREE068	HQ539032	None			I13V, E35D, M36I, R41K, K43R, H69K, L89M	CRF01_AE
	HM002	HM002	HQ539037	None			I13V, I15V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	HM003	HM003	HQ539038	None			I13V, K20R, E35D, M36I, R41K, L63P, H69K, L89M, Q92H, I93L	CRF01_AE
	HM004	HM004	HQ539039	None			Q7R, I13V, G16E, K20R, E35D, M36I, R41K, H69K, V77I, L89M, T91A, L97I	CRF01_AE
	HM008	HM008	HQ539043	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	HM009	HM009	HQ539044	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	HM012	HM012	HQ539047	None			L10I, I13V, G16E, E35D, M36I, R57K, L63S, H69K, L89M	CRF01_AE
	HM014	HM014	HQ539049	None			I13V, I15V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	HM016	HM016	HQ539051	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	HM017	HM017	HQ539052	None			G16E, K20R, E35D, M36I, R41K, H69K, L89M, I93L	CRF01_AE
	HM018	HM018	HQ539053	None		L89V	I13V, E35D, M36I, R41K, H69K	CRF01_AE
	HM020	HM020	HQ539054	None			I13V, K14R, I15V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	HM025	HM025	HQ539059	None			T12P, I13V, K20R, A22T, E35D, M36I, R41K, E65K, H69K, L89M, L97I	CRF01_AE
	HM026	HM026	HQ539060	None			I13V, E35D, M36I, R41K, R57K, H69K, L89M	CRF01_AE
	HM029	HM029	HQ539063	None			I13V, I15V, E35D, M36I, R41K, R57K, H69K, L89M	CRF01_AE
	HM030	HM030	HQ539064	None			T12A, I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	HM031	HM031	HQ539065	None			D25N, E34K, E35D, M36I, R41K, K45R, H69R, L89M, I93L	CRF01_AE
	HM032	HM032	HQ539066	None			G16E, E35D, M36I, R41K, L63C, H69K, L89M, I93L	CRF01_AE
	HM035	HM035	HQ539068	None			I13V, L33V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	HM036	HM036	HQ539069	None			I13V, I15V, G16E, E35D, M36I, R57K, Q61E, I62V, L63S, H69K, K70R, L89M	CRF01_AE
	HM038	HM038	HQ539071	None			I13V, G16E, K20R, E35D, M36I, R41K, L63P, H69K, L89M, I93L	CRF01_AE
	HM040	HM040	HQ539073	None			L10I, I13V, E35D, M36I, R41K, H69Q, L89M	CRF01_AE
	HM041	HM041	HQ539074	None			G16A, E35D, M36I, N37D, R41K, R57K, H69K, K70R, L89M, I93L	CRF01_AE
	HM042	HM042	HQ539075	None			I13V, G16E, E35D, M36I, R41K, H69K, K70R, L89M	CRF01_AE
	HM043	HM043	HQ539076	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	HM044	HM044	HQ539077	None			I13V, E35D, M36I, R57K, L63P, H69K, L89M	CRF01_AE
	HM045	HM045	HQ539078	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	HM047	HM047	HQ539080	None			I13V, E35D, M36I, R41K, H69K, I72T, L89M	CRF01_AE
	HM051	HM051	HQ539084	None			I13V, G16E, K20R, E35D, M36I, P39S, R41K, K45R, L63P, H69K, L89M, I93L	CRF01_AE
	HM054	HM054	HQ539087	None			I13V, G16E, K20M, E35D, M36I, R41K, H69K, K70R, L89M	CRF01_AE
	HM055	HM055	HQ539088	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	HM063	HM063	HQ539094	None			I13V, G16E, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	HM067	HM067	HQ539096	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	HM069	HM069	HQ539098	None			E35D, M36I, R41K, L63T, H69K, L89M, I93L	CRF01_AE
	HM071	HM071	HQ539100	None			G16E, E35D, M36I, R57K, H69K, L89M	CRF01_AE
	HM072	HM072	HQ539101	None			I15V, G16E, E35D, M36I, R57K, L63A, H69K, K70R, L89M	CRF01_AE
	HM073	HM073	HQ539102	None			I13V, E35D, M36I, R41K, I62V, L63P, H69R, L89M	CRF01_AE
	HM074	HM074	HQ539103	None			I13V, G16E, E35D, M36I, R57K, Q61E, H69K, K70R, V82I, L89M	CRF01_AE
	HM078	HM078	HQ539107	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	HM081	HM081	HQ539110	None			I13V, K20R, E35D, M36I, R41K, H69K, L89M, L97I	CRF01_AE
	HM085	HM085	HQ539113	None			I13V, I15V, E35D, M36I, R57K, H69K, V82I, L89M	CRF01_AE
	HM086	HM086	HQ539114	None			I13V, K20I, E35D, M36I, R41K, R57K, H69K, K70R, V82I, L89M	CRF01_AE
	HM090	HM090	HQ539118	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	HM094	HM094	HQ539121	None			L10I, I13V, G16E, E35D, M36I, R41K, Q61E, H69K, I72V, L89M	CRF01_AE
	HM095	HM095	HQ539122	None			L10I, I13V, K14R, G16E, E35D, M36I, N37D, R41K, H69K, L89M	CRF01_AE
	HM096	HM096	HQ539123	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	HM098	HM098	HQ539124	None			K14R, E35D, M36I, R41K, L63A, H69K, K70R	CRF01_AE
	HM099	HM099	HQ539125	None			I13V, G16E, K20R, E35D, M36I, R41K, H69K, K70R, L89M	CRF01_AE
	HM100	HM100	HQ539126	None			I13V, E35D, M36I, R41K, H69K, V82I, L89M	CRF01_AE
	HM102	HM102	HQ539128	None			K20R, E35D, M36I, R41K, L63P, H69K, L89M, I93L	CRF01_AE
	HM104	HM104	HQ539130	None			I13V, K20R, E35D, M36I, R41K, H69K, V77I, L89M	CRF01_AE
	HM105	HM105	HQ539131	None			I13V, E35D, M36I, R41K, R57K, H69K, L89M	CRF01_AE
	HM108	HM108	HQ539134	None			I13V, E35D, M36I, R41K, I62V, H69K, V82I, L89M	CRF01_AE
	HM109	HM109	HQ539135	None			I13V, K20R, E35D, M36I, R41K, H69K, L89M, L97I	CRF01_AE
	HM112	HM112	HQ539138	None			I13V, E35D, M36I, R41K, R57K, H69K, L89M	CRF01_AE
	HM116	HM116	HQ539142	None			I13V, E35D, M36I, R57K, H69K, L89M	CRF01_AE
	HM119	HM119	HQ539144	None			I13V, I15V, G16E, K20R, E35D, M36I, R57K, D60E, L63S, H69K, L89M, I93L	CRF01_AE
	HM123	HM123	HQ539148	None			I13V, E35D, M36I, R41K, D60E, Q61E, H69K, L89M	CRF01_AE
	HM125	HM125	HQ539150	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	HM126	HM126	HQ539151	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	HM131	HM131	HQ539156	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	HM135	HM135	HQ539160	None			I13V, I15V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	HM136	HM136	HQ539161	None			I13V, E35D, M36I, R41K, H69K, K70R, L89M	CRF01_AE
	HM137	HM137	HQ539162	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	HM140	HM140	HQ539165	None			T12P, I13V, K14R, E35D, M36I, R41K, L63S, H69K, T74S, L89M	CRF01_AE
	HM143	HM143	HQ539168	None			I13V, E35D, M36I, R41K, I62V, L63P, H69K, K70R, V82I, L89M, T91I	CRF01_AE
	HM144	HM144	HQ539169	None			I13V, G16E, K20I, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	HM145	HM145	HQ539170	None			I13V, I15V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	HM148	HM148	HQ539173	None			E35D, M36I, R41K, H69K, L89M	CRF01_AE
	HM149	HM149	HQ539174	None			L10I, E35D, M36I, R41K, L63T, C67H, H69K, L89M	CRF01_AE
	HM150	HM150	HQ539175	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	HM152	HM152	HQ539176	None			I13V, K20I, E35D, M36I, R57K, H69K, V82I, L89M	CRF01_AE
	HM159	HM159	HQ539182	None			I13V, K20R, E35D, M36I, N37D, H69K, L89M	CRF01_AE
	HM160	HM160	HQ539183	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	MOVL020	MOVL020	HQ539186	None			I13V, E35D, M36I, R41K, R57K, L63P, L89M	CRF01_AE
	MOVL024	MOVL024	HQ539188	None			I13V, E35D, M36I, R41K, H69K, K70Q, L89M	CRF01_AE
	MOVL136	MOVL136	HQ539190	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	MOVL067	MOVL067	HQ539192	None			I13V, E35D, M36I, N37D, R57K, L63P, H69K, K70R, L89M	CRF01_AE
	MOVL094	MOVL094	HQ539194	None			I13V, E35D, M36I, R41K, Q61E, H69K, I72M, L89M	CRF01_AE
	MOVL119	MOVL119	HQ539196	None			T12P, I13V, E35D, M36I, R41K, L63P, H69K, L89M	CRF01_AE
	MOVL127	MOVL127	HQ539198	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	MOVL134	MOVL134	HQ539199	None			I13V, E35D, M36I, R41K, I62V, H69K, V82I, L89M	CRF01_AE
	MOVL148	MOVL148	HQ539200	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	MOVL224	MOVL224	HQ539203	None			I13V, I15V, G16E, K20R, E35D, M36I, R57K, D60E, L63S, H69K, L89M, I93L	CRF01_AE
	MOVL236	MOVL236	HQ539204	None			T12A, E35D, M36I, R41K, R57K, I62V, H69K, L89M	CRF01_AE
Ngo-Giang-Huong (2011)	PHPT0375	PHPT0375PR-RT	HQ996498	None		L33F	L10I, I13V, E35D, M36I, R41K, G68E, H69K, K70R, L89IM	CRF01_AE
	PHPT2522	PHPT2522PR-RT	HQ996499	None			L10V, I13V, K14R, G16E, E35D, M36I, N37E, R41K, H69K, K70R, L89M	CRF01_AE
	PHPT4397	PHPT4397PR-RT	HQ996500	None			L10IV, I13V, I15V, G16E, K20KI, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	PHPT4703	PHPT4703PR-RT	HQ996501	None			I13V, E35D, M36I, R41K, R57K, H69K, L89M	CRF01_AE
	PHPT1216	PHPT1216PR-RT	HQ996502	None			L10I, I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	PHPT2944	PHPT2944PR-RT	HQ996503	None			I13V, I15V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	PHPT4016	PHPT4016PR-RT	HQ996504	None			I13V, E35D, M36I, R41K, H69K, L89IM	CRF01_AE
	PHPT4484	PHPT4484PR-RT	HQ996505	None			I13V, E35D, M36I, R41K, H69K, I72V, L89M	CRF01_AE
	PHPT2780	PHPT2780PR-RT	HQ996506	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	PHPT4619	PHPT4619PR-RT	HQ996507	None			I13V, E35D, M36I, N37ND, R41K, H69K, L89M	CRF01_AE
	PHPT2464	PHPT2464PR-RT	HQ996508	None			L10I, Q18E, E35D, M36I, H69K, L89M	CRF01_AE
	PHPT2915	PHPT2915PR-RT	HQ996510	None			E35D, M36I, R41K, H69K, L89M	CRF01_AE
	PHPT1374	PHPT1374PR-RT	HQ996511	None			L10LV, T12TP, I13V, I15IV, K20R, E35D, M36I, R41K, R57K, H69K, L89M	CRF01_AE
	PHPT1681	PHPT1681PR-RT	HQ996512	None			E35D, M36I, R41K, R57K, H69K, L89M	CRF01_AE
	PHPT1927	PHPT1927PR-RT	HQ996513	None			I13V, E35D, M36I, R41K, R57K, H69K, L89M	CRF01_AE
	PHPT4028	PHPT4028PR-RT	HQ996516	None			I13IV, E35D, M36I, R41K, H69K, K70R, L89M	CRF01_AE
	PHPT4163	PHPT4163PR-RT	HQ996517	None			I13V, I15IV, K20KI, E35D, M36I, R41K, K43KR, R57RK, H69K, V82I, L89M, T91V	CRF01_AE
	PHPT2601	PHPT2601PR-RT	HQ996519	None			K20R, E35D, M36I, N37D, R57K, L63A, H69K, L89M	CRF01_AE
	PHPT1796	PHPT1796PR-RT	HQ996520	None			K20R, E35D, M36I, R41K, L63P, H69K, L89M, I93L	CRF01_AE
	PHPT0773	PHPT0773PR-RT	HQ996522	None			E35D, M36I, N37D, R41K, H69K, L89M	CRF01_AE
	PHPT2972	PHPT2972PR-RT	HQ996523	None			L10I, T12A, I13V, E35D, M36I, R41K, R57K, H69K, L89I	CRF01_AE
	PHPT1601	PHPT1601PR-RT	HQ996524	None			L10LI, I13V, G16E, E35D, M36I, R41K, R57K, I62IV, H69K, L89M	CRF01_AE
	PHPT4801	PHPT4801PR-RT	HQ996525	None			I13V, I15V, K20KR, E35D, M36I, R41K, R57K, H69K, L89M	CRF01_AE
	PHPT1567	PHPT1567PR-RT	HQ996526	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	PHPT0650	PHPT0650PR-RT	HQ996527	None			I13V, E35D, M36I, R41K, R57K, L63S, H69K, K70R, L89M	CRF01_AE
Su (2011)	LZ2006	LZ2006	HQ588182	None			E35D, M36I, R41K, H69K, L89M, I93L	CRF01_AE
	LZ2008	LZ2008	HQ588183	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	LZ2009	LZ2009	HQ588184	None			L10V, I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	LZ2014	LZ2014	HQ588187	None			I13V, E35D, M36I, R41K, R57K, H69K, L89M	CRF01_AE
	LZ2015	LZ2015	HQ588188	None			I13V, G16E, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	LZ2016	LZ2016	HQ588189	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	LZ2018	LZ2018	HQ588191	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	LZ2019	LZ2019	HQ588192	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	LZ2020	LZ2020	HQ588193	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	LZ2022	LZ2022	HQ588194	None			I13V, E35D, M36I, R41K, R57K, Q61E, H69K, K70R, L89M	CRF01_AE
	LZ2023	LZ2023	HQ588195	None			E35D, M36I, R41K, H69K, L89M	CRF01_AE
	LZ2034	LZ2034	HQ588196	None			I13V, E35D, M36I, R41K, H69K, L89I	CRF01_AE
	LZ2056	LZ2056	HQ588198	None			E35D, M36I, R41K, H69K, V75G, N83T, L89M	CRF01_AE
	LZ2066	LZ2066	HQ588199	None			I13V, I15V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	LZ2068	LZ2068	HQ588200	None			E35D, M36I, R41K, H69K, L89M	CRF01_AE
	LZ2070	LZ2070	HQ588201	None			I13V, G16E, E35D, M36I, N37D, R41K, H69K, K70R, L89M	CRF01_AE
	LZ2090	LZ2090	HQ588203	None			I13V, E35D, M36I, R41K, R57K, H69K, L89M	CRF01_AE
	LZ2093	LZ2093	HQ588204	None			K20R, E35D, M36I, N37D, R41K, L63P, H69K, L89M, I93L	CRF01_AE
	LZ2100	LZ2100	HQ588206	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	LZ2111	LZ2111	HQ588211	None			G16E, E35D, M36I, R41K, I62V, H69K, K70R, L89M	CRF01_AE
	LZ2112	LZ2112	HQ588212	None			E35D, M36I, R41K, H69K, L89M, I93L	CRF01_AE
	LZ2115	LZ2115	HQ588213	None			E35D, M36I, R41K, H69K, L89M	CRF01_AE
	LZ2116	LZ2116	HQ588214	None			E35D, M36I, R41K, H69K, L89M	CRF01_AE
	LZ2121	LZ2121	HQ588215	None			E35D, M36I, R41K, L63P, H69K, L89M, I93L	CRF01_AE
	LZ2131	LZ2131	HQ588218	None			E35D, M36I, R41K, Q61E, H69K, L89M, I93L	CRF01_AE
	LZ2136	LZ2136	HQ588219	None			T12A, I13V, E35D, M36I, R41K, K45E, Y59C, E65A, H69K, K70E, G73V, V75A, G78R, L89M	CRF01_AE
	LZ2140	LZ2140	HQ588221	None			E35D, M36I, R41K, L63P, H69K, L89M, I93L	CRF01_AE
	LZ2141	LZ2141	HQ588222	None			E35D, M36I, R41K, I64M, H69K, L89M	CRF01_AE
	LZ2147	LZ2147	HQ588223	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	LZ2148	LZ2148	HQ588224	None			E35D, M36I, R41K, L63P, I64M, H69K, L89M, I93L	CRF01_AE
	LZ2151	LZ2151	HQ588225	None			L10V, I15V, E35D, M36I, R41K, H69K, L89M, I93L	CRF01_AE
	LZ2160	LZ2160	HQ588226	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	LZ2161	LZ2161	HQ588227	None			E35D, M36I, R41K, I64V, H69K, L89M, I93L	CRF01_AE
	LZ2162	LZ2162	HQ588228	None			E35D, M36I, R41K, Q61E, H69K, L89M, I93L	CRF01_AE
	LZ2163	LZ2163	HQ588229	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	LZ2168	LZ2168	HQ588231	None			I13V, G16E, K20R, E35D, M36I, R41K, L63V, H69K, I72V, L89M, I93L	CRF01_AE
	LZ2169	LZ2169	HQ588232	None			E35D, M36I, R41K, H69K, L89M	CRF01_AE
	GXNN5820	GXNN5820	HQ588233	None			I13V, G16E, L19I, K20M, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	GXNN5927	GXNN5927	HQ588235	None			I13V, E35D, M36I, R41K, H69R, L89M, I93L	CRF01_AE
	GXNN6093	GXNN6093	HQ588236	None			E35D, M36I, R41K, H69K, L89M, I93L	CRF01_AE
	GXNN7481	GXNN7481	HQ588237	None			E35D, M36I, R41K, H69K, L89M	CRF01_AE
	GXNN5019	GXNN5019	HQ588238	None			I13V, G16E, E35D, M36I, R41K, H69K, K70R, L89M	CRF01_AE
	GXBY5817	GXBY5817	HQ588239	None			I13V, E35D, M36I, R41K, H69R, I72V, L89M, I93L	CRF01_AE
	GXBY5637	GXBY5637	HQ588241	None			E35D, M36I, R41K, H69K, L89M	CRF01_AE
	GXHX5907	GXHX5907	HQ588242	None			I13V, G16E, L19I, E35D, M36I, R41K, H69K, I72V, L89M	CRF01_AE
	GXHX6819	GXHX6819	HQ588243	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	GXNN1960	GXNN1960	HQ588244	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	GXNN1877	GXNN1877	HQ588247	None			I13V, G16GE, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	GXBY5848	GXBY5848	HQ588250	None			I13V, E35D, M36I, R41K, K45R, H69K, L89M	CRF01_AE
	GXNN7001	GXNN7001	HQ588251	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	GXNN7368	GXNN7368	HQ588252	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	GXHX7505	GXHX7505	HQ588253	None			E35D, M36I, R41K, Q61E, H69K, K70R, L89M	CRF01_AE
	GXHX6917	GXHX6917	HQ588254	None			I13V, G16E, E35D, M36I, R41K, L63P, H69K, L89M, I93L	CRF01_AE
	GXHX7248	GXHX7248	HQ588255	None			I13V, E35D, M36I, R41K, R57K, H69K, L89M	CRF01_AE
	GXHX7249	GXHX7249	HQ588256	None			I13V, E35D, M36I, R41K, R57K, H69K, L89M	CRF01_AE
	GXBY7485	GXBY7485	HQ588258	None			I13V, G16E, E35D, M36I, R41K, K45R, H69K, L89M	CRF01_AE
	GXNN1819	GXNN1819	HQ588260	None			I13V, G16E, E35D, M36I, R41K, L63P, H69K, L89M, I93L	CRF01_AE
	GXBY3609	GXBY3609	HQ588262	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	GXNN3989	GXNN3989	HQ588263	None			I13V, I15V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	GXNN5642	GXNN5642	HQ588265	None			T12TI, I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	GXNN5863	GXNN5863	HQ588266	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	GXNN6069	GXNN6069	HQ588267	None			I13V, E35D, M36I, R41K, H69K, K70R, L89M	CRF01_AE
	GXBY6187	GXBY6187	HQ588268	None			I13V, E35D, M36V, R41K, H69K, L89M	CRF01_AE
	GXNN5822	GXNN5822	HQ588270	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	GXHX2023	GXHX2023	HQ588271	None			E35D, M36I, N37D, R41K, H69R, L89M, I93L	CRF01_AE
	GXNN7478	GXNN7478	HQ588273	None			G16E, E35D, M36I, R41K, L63T, H69K, K70R, I72T, L89M, I93L	CRF01_AE
	GXNN0143	GXNN0143	HQ588301	None			T12P, G16E, E35D, M36I, R41K, L63S, H69K, L89M, I93L	CRF01_AE
	GXNN0594	GXNN0594	HQ588302	None			I13V, G16E, E35D, M36I, R41K, K55KN, H69K, I72V, L89M	CRF01_AE
Ye (2011)	BJ07150	BJ07150	JF906578	None			L10I, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	BJ07240	BJ07240	JF906593	None		V11VI	E35D, M36I, R41K, H69K, L89M	CRF01_AE
	BJ07257	BJ07257	JF906597	None			E35D, M36I, R41K, H69K, L89M	CRF01_AE
	BJ07261	BJ07261	JF906599	None			E35D, M36I, R41K, H69K, L89M	CRF01_AE
	BJ07268	BJ07268	JF906600	None			I13V, G16E, L19T, E35D, M36I, R41K, H69K, K70R, L89M	CRF01_AE
	BJ07286	BJ07286	JF906604	None			E35D, M36I, R41K, H69K, L89M	CRF01_AE
	BJ07308	BJ07308	JF906606	None			L10I, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	BJ07330	BJ07330	JF906610	None			G16E, E35D, M36I, R41K, H69K, K70R, L89M, I93L	CRF01_AE
	BJ07337	BJ07337	JF906611	None			E35D, M36I, R41K, H69K, L89M	CRF01_AE
	BJ07345	BJ07345	JF906615	None			E35D, M36I, R41K, H69K, L89M	CRF01_AE
	BJ07357	BJ07357	JF906619	None			I13V, K14R, L19T, E35D, M36I, R41K, H69K, K70R, L89M	CRF01_AE
	BJ07364	BJ07364	JF906621	None			I13V, L19T, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	BJ07368	BJ07368	JF906623	None			K20R, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	BJ07371	BJ07371	JF906624	None			I13V, L19M, E35D, M36I, R41K, H69K, V82I, L89M, I93L	CRF01_AE
	BJ07402	BJ07402	JF906636	None			L19M, E35D, M36I, R41K, H69K, L89M, I93L	CRF01_AE
	BJ07414	BJ07414	JF906639	None			E35D, M36I, R41K, H69K, L89M	CRF01_AE
	BJ07418	BJ07418	JF906640	None			E35D, M36I, R41K, H69K, K70KR, A71AT, L89M, I93L	CRF01_AE
	BJ07425	BJ07425	JF906641	None			I13V, L19I, E35D, M36I, R41K, H69K, K70R, V77I, L89M	CRF01_AE
	BJ07443	BJ07443	JF906646	None			E35D, M36I, R41K, H69K, L89M, I93L	CRF01_AE
	BJ07475	BJ07475	JF906652	None			E35D, M36I, R41K, H69K, L89M	CRF01_AE
	BJ07525	BJ07525	JF906660	None		V11I	L19V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	BJ07528	BJ07528	JF906661	None			E35D, M36I, R41K, H69K, L89M, I93L	CRF01_AE
	BJ07537	BJ07537	JF906663	None			I15V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	BJ07542	BJ07542	JF906664	None			K20R, E35D, M36I, R41K, H69K, L89M, I93L	CRF01_AE
	BJ07546	BJ07546	JF906667	None			I13V, L19T, E35D, M36I, R41K, H69K, I72V, V77I, L89M	CRF01_AE
	BJ07562	BJ07562	JF906675	None			K20R, E35D, M36I, R41K, H69K, L89M, I93L	CRF01_AE
	BJ07617	BJ07617	JF906685	None			E35D, M36I, R41K, H69K, L89M	CRF01_AE
	BJ07618	BJ07618	JF906686	None			K14R, E35D, M36I, R41K, H69K, L89M, I93L	CRF01_AE
	BJ07621	BJ07621	JF906688	None			I13V, L19I, E35D, M36I, R41K, H69K, K70R, L89M	CRF01_AE
	BJ07627	BJ07627	JF906691	None			L10V, I13V, G16E, L19I, E35D, M36I, R41K, K45R, H69K, K70R, L89M	CRF01_AE
	BJ07628	BJ07628	JF906692	None			E35D, M36I, R41K, H69K, L89M	CRF01_AE
	BJ07639	BJ07639	JF906696	None			I13V, L19M, K20I, E35D, M36I, R41K, H69K, V82I, L89M	CRF01_AE
Zeng (2011)	K1	K1	JF505552	None			L19M, E35D, M36I, R41K, H69K, L89M, I93L	CRF01_AE
	K43	K43	JF505553	None			L19M, K20R, E35D, M36I, R41K, H69K, L89M, I93L	CRF01_AE
	K13	K13	JF505554	None			K14R, E35D, M36I, N37D, R41K, H69K, L89M	CRF01_AE
	K64	K64	JF505555	None			E35D, M36I, R41K, H69K, L89M	CRF01_AE
	K52	K52	JF505557	None			E35D, M36I, R41K, H69K, L89M	CRF01_AE
	K32	K32	JF505558	None			K20R, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	K29	K29	JF505559	None			E35D, M36I, R41K, H69K, L89M	CRF01_AE
	K4	K4	JF505560	None			I13V, E35D, M36I, R41K, H69K, L89M, I93L	CRF01_AE
	K5	K5	JF505561	None			I13V, E35D, M36I, R41K, K45R, H69K, V82I, L89M	CRF01_AE
	K39	K39	JF505562	None			L10M, I13V, L19M, E35D, M36I, R41K, R57K, H69K, L89M	CRF01_AE
	K27	K27	JF505563	None			E35D, M36I, R41K, H69K, L89M, I93L	CRF01_AE
	K55	K55	JF505565	None			I13V, I15V, E35D, M36I, R41K, H69K, V82I, L89M, I93L	CRF01_AE
	U4	U4	JF505567	None			L10V, I13V, E35D, M36I, R41K, H69K, K70R, L89M	CRF01_AE
	G1	G1	JF505568	None			I13V, E35D, M36I, R41K, H69K, T74S, L89M, I93L	CRF01_AE
	G3	G3	JF505570	None			I15V, E35D, M36I, R41K, K45R, H69K, L89M, I93L	CRF01_AE
	G4	G4	JF505571	None			G16E, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	G6	G6	JF505573	None			I13V, E35D, M36I, R41K, K45R, H69K, I72V, L89M	CRF01_AE
	G7	G7	JF505574	None			I13V, I15V, E35D, M36I, R41K, H69K, K70R, L89M	CRF01_AE
	K3	K3	JF505575	None			E35D, M36I, R41K, H69K, L89M	CRF01_AE
	K9	K9	JF505577	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	K35	K35	JF505584	None			E35D, M36I, N37D, R41K, H69K, K70R, L89M	CRF01_AE
	K58	K58	JF505586	None			L19M, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	G8	G8	JF505591	None			I13V, E35D, M36I, R41K, H69K, I72V, L89M	CRF01_AE
	K37	K37	JF505592	None			I13V, E35D, M36I, R41K, H69K, I72M, V82I, L89M	CRF01_AE
	K60	K60	JF505593	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	M1	M1	JF505611	None			E35D, M36I, L63P, H69K, L89M	CRF01_AE
	M2	M2	JF505612	None			I13V, K20R, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	M3	M3	JF505613	None			E35D, M36I, R41K, H69K, K70R, L89M	CRF01_AE
	M5	M5	JF505615	None			E35D, M36I, R41K, H69K, K70R, L89M	CRF01_AE
	K21	K21	JF505556	None			G16E, E35D, M36I, R41K, H69K, K70R, L89M	CRF01_AE
	K41	K41	JF505564	None			I13V, I15V, K20I, E35D, M36I, R41K, H69K, K70R, I72V, V82I, L89M	CRF01_AE
	K6	K6	JF505566	None			L10V, I13V, G16E, E35D, M36I, R41K, H69K, K70R, L89M	CRF01_AE
	G5	G5	JF505572	None			I15V, K20R, E35D, M36I, R41K, C67H, H69K, I72V, L89M	CRF01_AE
	G10	G10	JF505594	None			I13V, G16E, K20R, E35D, M36I, R41K, H69K, K70R, I72V, L89M	CRF01_AE
	U11	U11	JF505619	None			T12A, E35D, M36I, R41K, L63S, H69K, K70R, L89M	CRF01_AE
An (2012)	09LNA379	09LNA379	JX960603	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	09LNA008	09LNA008	JX960604	None			K20R, E35D, M36I, R41K, H69K, L89M, I93L	CRF01_AE
	09LNA011	09LNA011	JX960605	None			K20R, E35D, M36I, R41K, H69K, L89M, I93L	CRF01_AE
	08LNA003	08LNA003	JX960606	None			K20R, E35D, M36I, R41K, H69K, L89M, I93L	CRF01_AE
	09LNA340	09LNA340	JX960607	None			K20R, E35D, M36I, R41K, L63I, H69K, K70Q, I72M, L89M, I93L	CRF01_AE
	10LNA103	10LNA103	JX960608	None			I13V, E35D, M36I, R41K, H69K, K70R, L89M	CRF01_AE
	10LNA124	10LNA124	JX960609	None			L10V, I13V, K14R, G16E, E35D, M36I, R41K, H69K, K70Q, L89M, Q92K	CRF01_AE
	10LNA819	10LNA819	JX960610	None			L10V, I13V, K14R, G16E, E35D, M36I, R41K, H69K, K70Q, L89M, Q92K, C95Y	CRF01_AE
	10LNA571	10LNA571	JX960611	None			E35D, M36I, R41K, L63P, H69K, L89M, I93L	CRF01_AE
	08LNA002	08LNA002	JX960612	None			I13V, L19M, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	09LNA020	09LNA020	JX960613	None			I13V, L19M, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	09LNA230	09LNA230	JX960614	None			I13V, L19M, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	09LNA040	09LNA040	JX960615	None			L19M, E35D, M36I, R41K, L63LI, H69K, L89M	CRF01_AE
	10LNA821	10LNA821	JX960616	None			I13V, L19M, E35D, M36I, R41K, C67Y, H69K, R87Q, L89M	CRF01_AE
	08LNA004	08LNA004	JX960617	None			T12S, L19I, E35D, M36I, R41K, L63M, H69K, V82I, L89M, I93L	CRF01_AE
	09LNA041	09LNA041	JX960618	None			L19I, E35D, M36I, R41K, L63T, H69K, V82I, L89M, I93L	CRF01_AE
	10LNA294	10LNA294	JX960619	None			T12S, L19I, K20R, E35D, M36I, R41K, L63S, H69K, V82I, L89M, I93L	CRF01_AE
	10LNA918	10LNA918	JX960620	None			T12S, L19I, K20R, E35D, M36I, R41K, L63S, H69K, V82I, L89M, I93L	CRF01_AE
	09LNA425	09LNA425	JX960621	None			T12S, L19I, E35D, M36I, R41K, L63S, H69K, V82I, L89M, I93L	CRF01_AE
	10LNA264	10LNA264	JX960622	None			L19I, E35D, M36I, R41K, L63V, H69K, V82I, L89M, I93L	CRF01_AE
	09LNA527	09LNA527	JX960625	None			I13V, L19M, E35D, M36I, R41K, R57K, H69K, K70R, V82I, L89M, I93L	CRF01_AE
	10LNA105	10LNA105	JX960626	None			I13V, G16E, L19M, K20R, E35D, M36I, R41K, K45R, I62V, L63T, H69K, V82I, L89M, I93L	CRF01_AE
	09LNA007	09LNA007	JX960627	None			L19M, E35D, M36I, R41K, C67Y, H69K, L89M	CRF01_AE
	09LNA353	09LNA353	JX960628	None			I13V, L19M, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	10LNA016	10LNA016	JX960629	None			I13V, L19M, E35D, M36I, R41K, R57K, H69K, L89M	CRF01_AE
	10LNA057	10LNA057	JX960633	None			T12A, I15V, L19I, E35D, M36I, R41K, L63P, I64M, H69K, K70R, L89M, I93L	CRF01_AE
	09LNA025	09LNA025	JX960634	None			I13V, L19M, E35D, M36I, R41K, L63P, H69K, K70R, V77I, L89M	CRF01_AE
	09LNA423	09LNA423	JX960635	None			I13V, E35D, M36I, R41K, K45R, L63C, H69K, L89M	CRF01_AE
Caron (2012)	Gab062202	Gab062202	HQ541924	None			I13V, E35D, M36I, N37D, R41K, H69K, K70R, L89M	CRF01_AE
	Gab081183	Gab081183	HQ541932	None			I13V, G17E, L19I, E35D, M36I, N37D, R41K, K43R, L63P, H69K, L89M	CRF01_AE
Chamberland (2012)	C497S	C497S	HQ267593	None			L10I, T12A, I13V, K14R, I15V, K20I, E35D, M36I, N37S, R41K, R57K, H69Q, K70R, P79A, L89M	CRF01_AE
Chen (2012)	YN09DH0001	YN09DH0001	JQ658474	None			I13V, E35D, M36I, R41K, H69K, I72IV, V77I, V82I, L89M	CRF01_AE
	YN09DH0002	YN09DH0002	JQ658475	None			I13V, E35D, M36I, R41K, H69K, V77I, V82I, L89M	CRF01_AE
	YN09DH0016	YN09DH0016	JQ658489	None			L10I, I13V, I15V, K20I, E35D, M36I, L63P, H69K, V82I, L89M, I93V	CRF01_AE
	YN09DH0021	YN09DH0021	JQ658492	None			I13V, G16E, E35D, M36I, R41K, H69K, K70R, L89M	CRF01_AE
	YN09DH0032	YN09DH0032	JQ658502	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	YN09DH0046	YN09DH0046	JQ658516	None			L10V, I13V, I15IM, E35D, M36I, N37D, R41K, R57K, H69K, L89M, I93L	CRF01_AE
	YN09DH0056	YN09DH0056	JQ658525	None		L33F	I13V, K14N, L23LP, E35D, M36I, H69K, I72IV, L89M, I93V	CRF01_AE
	YN09DH0057	YN09DH0057	JQ658526	None			L10LI, I13IV, E35D, M36I, R41K, R57K, H69K, V77VI, L89M	CRF01_AE
	YN09DH0099	YN09DH0099	JQ658563	None			L10V, I13V, G16E, E35D, M36I, R41K, L63I, H69K, I72IV, L89M, I93IV	CRF01_AE
	YN09DH0100	YN09DH0100	JQ658564	None			G16A, E35D, M36I, N37D, R41K, H69K, L89M	CRF01_AE
	YN09DH0105	YN09DH0105	JQ658568	None			G16E, E35D, M36I, R41K, L63P, H69K, I93L	CRF01_AE
	YN09DH0123	YN09DH0123	JQ658583	None			E35D, M36I, R41K, L63P, H69K, L89M, I93L	CRF01_AE
	YN09DH0139	YN09DH0139	JQ658597	None			I13V, I15IV, K20KR, E35D, M36V, R41K, H69K, K70KR, L89M	CRF01_AE
	YN09DH0141	YN09DH0141	JQ658598	None			K20KR, E35D, M36I, R41K, R57K, H69K, L89M, I93L	CRF01_AE
	YN09DH0144	YN09DH0144	JQ658601	None			T12TA, G16E, E35D, M36I, R41K, H69K, L89M, I93L	CRF01_AE
	YN09DH0148	YN09DH0148	JQ658605	None			G16E, L19LI, E35D, M36I, R41K, H69K, K70R, L89M	CRF01_AE
	YN09DH0150	YN09DH0150	JQ658607	None			T12I, I13V, G16E, E35D, M36I, R41K, R57K, I62V, H69K, L89M, I93IV	CRF01_AE
	YN09DH0155	YN09DH0155	JQ658612	None			I13V, E35D, M36I, N37D, R41K, L63P, H69K, V77I, L89M	CRF01_AE
	YN09DH0165	YN09DH0165	JQ658622	None			L10V, I13V, G16E, E35D, M36I, R41K, L63I, H69K, L89M, I93IV	CRF01_AE
	YN10DH0022	YN10DH0022	JQ658647	None			L10I, I13V, E35D, M36I, R41K, H69KQ, L89M	CRF01_AE
	YN10DH0038	YN10DH0038	JQ658662	None			I13V, G16E, K20R, E35D, M36I, R41K, H69K, I72IV, L89M	CRF01_AE
	YN10DH0042	YN10DH0042	JQ658666	None			I15IV, E35D, M36I, R41K, L63LP, H69K, V82VI, L89M, I93L	CRF01_AE
	YN10DH0043	YN10DH0043	JQ658667	None			L10LI, I13V, E35D, M36I, R41K, D60DE, Q61QE, L63P, H69K, K70KR, L89M, I93V	CRF01_AE
	YN10DH0044	YN10DH0044	JQ658668	None			L10I, I13V, E35D, M36I, R41K, L63P, H69KQ, L89M, I93V	CRF01_AE
	YN10DH0057	YN10DH0057	JQ658680	None			E35D, M36I, R41K, H69K, L89M, I93L	CRF01_AE
	YN10DH0058	YN10DH0058	JQ658681	None			I13V, E35D, M36I, R41K, I62V, H69K, K70R, I72IV, V82I, L89M	CRF01_AE
	YN10DH0060	YN10DH0060	JQ658683	None			T12TA, D29DG, E35D, M36I, R41K, L63P, H69K, L89M, I93L	CRF01_AE
	YN10DH0063	YN10DH0063	JQ658686	None			G16E, E35D, M36I, R41K, R57K, H69K, L89M, I93L	CRF01_AE
	YN10DH0065	YN10DH0065	JQ658687	None			E35D, M36I, R41K, L63LP, H69K, L89M, I93L	CRF01_AE
	YN10DH0071	YN10DH0071	JQ658692	None			I13V, I15V, E35D, M36I, R41K, H69K, I72IV, V82VI, L89M	CRF01_AE
	YN10DH0072	YN10DH0072	JQ658693	None			E35D, M36I, R41K, L63P, H69K, L89M, I93L	CRF01_AE
	YN10DH0073	YN10DH0073	JQ658694	None			I15IV, E35D, M36I, R41K, L63P, H69K, L89M, I93L	CRF01_AE
	YN10DH0076	YN10DH0076	JQ658697	None			L10LV, I13V, I15IV, G16GE, E35D, M36I, N37NI, R41K, L63PS, C67*DEY, H69KR, L89M, T91S	CRF01_AE
	YN10DH0080	YN10DH0080	JQ658701	None			K14KR, E35D, M36I, R41K, H69K, K70KR, I72V, L89M	CRF01_AE
	YN10DH0088	YN10DH0088	JQ658709	None			G16E, E35D, M36I, R41K, L63P, H69K, K70R, I93L	CRF01_AE
	YN10DH0100	YN10DH0100	JQ658721	None			G16E, L19M, E35D, M36I, R41K, L63T, H69K, L89M, I93L	CRF01_AE
	YN10DH0104	YN10DH0104	JQ658725	None			I13V, E35D, M36I, R41K, R57K, H69K, V82I, L89M	CRF01_AE
	YN10DH0121	YN10DH0121	JQ658741	None			I13V, G16E, E35D, M36I, R41K, H69K, K70R, L89M	CRF01_AE
	YN10DH0122	YN10DH0122	JQ658742	None			E35D, M36I, R41K, L63P, H69K, L89M, I93L	CRF01_AE
	YN10DH0126	YN10DH0126	JQ658746	None		L89MV	T12A, E35D, M36I, R41K, L63P, H69K, I93L	CRF01_AE
	YN10DH0127	YN10DH0127	JQ658747	None			E35D, M36I, R41K, H69K, L89M, I93L	CRF01_AE
	YN10DH0140	YN10DH0140	JQ658759	None			T12A, G16E, E35D, M36V, R41K, K45R, H69K, I72V, L89M, I93L	CRF01_AE
	YN10DH0142	YN10DH0142	JQ658761	None			L10I, I13V, G16E, E35D, M36I, P39Q, I62V, L63P, H69K, K70R, V82I, L89M	CRF01_AE
	YN10DH0145	YN10DH0145	JQ658764	None			I15V, E35D, M36I, R41K, L63V, H69K, T74TA	CRF01_AE
	YN10DH0149	YN10DH0149	JQ658768	None			I13V, E35D, M36I, N37S, R41K, L63P, H69KR, L89M, I93V	CRF01_AE
De Gascun (2012)	IRL16863	IRL16863	JN622218	None			Q18QK, E35D, M36V, R41K, H69K, L89M	CRF01_AE
	IRL17746	IRL17746	JN622220	None			I13V, K14KE, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	IRL25181	IRL25181	JN622221	None			Q7QR, L10V, I13V, G16E, K20I, E35D, M36I, N37NY, R41K, K45KN, L63V, H69K, G78GA, I85IM, L89M	CRF01_AE
	IRL08974	IRL08974	JN622224	None			L10I, I13V, E35D, M36I, R41K, C67G, H69K, L89M	CRF01_AE
	IRL12973	IRL12973	JN622225	None			V11VF, E35D, M36I, R41K, L63LP, H69K, L89M, I93L	CRF01_AE
	IRL40236	IRL40236	JN622227	None			I13V, G16E, E35D, M36I, R41K, I62V, H69K, L89M	CRF01_AE
	IRL22469	IRL22469	JN622228	None			I13V, G16GA, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	IRL39742	IRL39742	JN622230	None			I13V, G16E, E35D, M36I, R41K, H69K, L89I, Q92R	CRF01_AE
	IRL52172	IRL52172	JN622231	None			L10IV, I13V, E35D, M36I, R41K, R57RK, I62V, L63H, H69K, P79PS, L89M	CRF01_AE
	IRL58673	IRL58673	JN622232	None			I13V, G16E, K20R, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	IRL54561	IRL54561	JN622233	None			L10V, T12A, I13V, G16E, K20I, E35D, M36I, R41K, L63V, H69K, L89M	CRF01_AE
	IRL15038	IRL15038	JN622253	None			L10I, T12TP, I13V, G16A, E35D, M36I, R41K, R57RK, H69K, L89M	CRF01_AE
	IRL09587	IRL09587	JN622342	None			L10I, I13V, K14R, G16E, E35D, M36I, R41K, L63V, H69K, L89M, N98NK	CRF01_AE
	IRL23050	IRL23050	JN622347	None			W6WL, I13V, K14K*, E35D, M36I, R41K, K55KT, R57K, L63P, H69K, L89M	CRF01_AE
	IRL37384	IRL37384	JN622359	None			I13V, K14R, E35D, M36I, R41K, H69K, L89M	CRF01_AE
Hassan (2012)	RS09000930	RS09000930	HQ441672	None			I13V, K14R, G16E, E35D, M36I, R41K, R57K, Q61H, H69K, L89M	CRF01_AE
	RS11000276	RS11000276	JQ698367	None			T12TP, I13V, E35D, M36I, R41K, K45R, R57K, L63T, H69K, L89M	CRF01_AE
	RS11000304	RS11000304	JQ698389	None			I13V, K20R, E35D, M36I, R41K, R57K, D60E, I62V, H69K, L89M	CRF01_AE
	RS11000328	RS11000328	JQ698405	None			T12TP, I13V, K14R, I15V, E35D, M36I, N37D, R41K, R57K, Q61QH, H69K, L89M	CRF01_AE
Karlsson (2012)	SE_6	SE_6	JQ698668	None			I13V, G16E, E35D, M36I, N37D, R41K, K45R, R57K, H69K, L89M, Q92K	CRF01_AE
	SE_9	SE_9	JQ698670	None			I13V, E35D, M36I, R41K, H69K, I72V, L89M	CRF01_AE
	SE_12	SE_12	JQ698673	None			I13V, G16E, E35D, M36I, N37D, R41K, K45R, R57K, H69K, L89M, Q92K	CRF01_AE
	SE_17	SE_17	JQ698678	None			I13V, G16E, E35D, M36I, N37D, R41K, K45R, R57K, H69K, L89M, Q92K	CRF01_AE
	SE_51	SE_51	JQ698702	None			I13V, K20R, E35D, M36I, R41RK, L63PS, H69K, K70R, V82VI, L89M, T91A	CRF01_AE
	SE_56	SE_56	JQ698706	None			L10V, I13V, G16E, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	SE_59	SE_59	JQ698709	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	SE_62	SE_62	JQ698712	None			I13V, G16E, E35D, M36I, N37D, R41K, K45R, R57K, H69K, L89M, Q92K	CRF01_AE
	SE_100	SE_100	JQ698735	None			I13V, G16E, E35D, M36I, N37D, R41K, K45R, R57K, H69K, L89M, Q92K	CRF01_AE
	SE_101	SE_101	JQ698736	None			G16E, K20R, E35D, M36I, R41K, H69K, L89M, I93L	CRF01_AE
	SE_110	SE_110	JQ698743	None			I13V, E35D, M36I, R41K, I62IV, L63PS, H69K, T74TS, L89M	CRF01_AE
	SE_111	SE_111	JQ698744	None			K14R, E35D, M36I, R41K, L63A, H69K, L89M	CRF01_AE
	SE_123	SE_123	JQ698752	None			G16E, K20R, E35D, M36I, R41K, R57K, H69K, I72IV, L89M, Q92K	CRF01_AE
	SE_124	SE_124	JQ698753	None			I13V, G16A, E35D, M36I, R41K, H69K, K70KR, L89M	CRF01_AE
	SE_140	SE_140	JQ698765	None			I13V, G16E, E35D, M36I, R41K, R57K, L63H, E65EK, H69K, R87RQ, L89M, T96TI	CRF01_AE
	SE_149	SE_149	JQ698770	None			I13V, G16E, E35D, M36I, N37D, R41K, K45R, R57K, H69K, L89M, Q92K	CRF01_AE
	SE_155	SE_155	JQ698774	None			E35D, M36I, R41K, R57K, H69K, V82I, L89I	CRF01_AE
	SE_161	SE_161	JQ698779	None			W6G, G16E, E35D, M36I, R41K, H69K, L89M, I93L	CRF01_AE
	SE_162	SE_162	JQ698780	None			I13V, E35D, M36I, R41K, R57K, H69K, L89M	CRF01_AE
	SE_165	SE_165	JQ698782	None			I13V, G16E, L19LIM, E35D, M36I, N37D, R41K, K45R, R57K, H69K, L89M, Q92K	CRF01_AE
	SE_175	SE_175	JQ698787	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	SE_176	SE_176	JQ698788	None			L10I, I13V, G16E, E35D, M36I, R41K, L63T, H69Q, I72V, L89M	CRF01_AE
	SE_200	SE_200	JQ698806	None			I13V, G16E, E35D, M36I, N37D, R41K, K45R, R57K, H69K, L89M, Q92K	CRF01_AE
	SE_214	SE_214	JQ698818	None			L10I, I13V, I15V, K20KI, E35D, M36I, N37DE, K45KR, L63P, H69K, V82I, L89M, I93V	CRF01_AE
	SE_218	SE_218	JQ698821	None			I13V, I15IV, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	SE_242	SE_242	JQ698836	None			I13V, G16E, E35D, M36I, N37D, R41K, K45R, R57K, H69K, L89M, Q92K	CRF01_AE
	SE_260	SE_260	JQ698847	None			I13V, G16E, K20R, E35D, M36I, R41K, H69K, K70R, I72IV, L89M	CRF01_AE
	SE_271	SE_271	JQ698856	None			I13V, G16E, E35D, M36I, N37D, R41K, K45R, R57K, H69K, L89M, Q92K	CRF01_AE
	SE_279	SE_279	JQ698860	None			I13V, G16E, E35D, M36I, N37D, R41K, K45R, R57K, H69K, L89M, Q92K	CRF01_AE
	SE_282	SE_282	JQ698861	None			I13V, E35D, M36I, R41K, R57K, H69K, L89M	CRF01_AE
	SE_287	SE_287	JQ698864	None			L10V, I13V, K14R, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	SE_291	SE_291	JQ698866	None			I13V, K20R, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	SE_294	SE_294	JQ698868	None			L5LF, G16A, E35D, M36I, R41K, H69K, L89M, I93L	CRF01_AE
Kijak (2012)	05TH741452	05TH741452	JN248355	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	05TH130087	05TH130087	JN248339	None			L10V, T12I, I13V, G16E, E35D, M36I, R41K, L63N, H69K, L89M, I93L	CRF01_AE
	05TH342968	05TH342968	JN248342	None			T12A, E35D, M36I, R41K, L63P, H69K, L89M, I93L	CRF01_AE
	04TH505841	04TH505841	JN248328	None			I13V, E35D, M36I, R41K, I62V, H69K, I72T, L89M	CRF01_AE
	04TH328531	04TH328531	JN248324	None			G16E, K20R, E35D, M36I, R41K, L63S, H69K, L89M, I93L	CRF01_AE
	05TH841749	05TH841749	JN248356	None			I13V, E35D, M36I, R41K, K43R, L63S, H69K, L89M, I93T	CRF01_AE
	04TH107542	04TH107542	JN248318	None			T12S, I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	05TH127331	05TH127331	JN248338	None			T12S, I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	04TH423323	04TH423323	JN248326	None			K14R, E35D, M36I, R41K, H69K, L89M, I93IL	CRF01_AE
	04TH817196	04TH817196	JN248336	None			L10V, I13V, L19I, K20R, E35D, M36I, R41K, L63I, H69K, V77A, L89M	CRF01_AE
	04TH613543	04TH613543	JN248330	None			L10V, T12P, I13V, G16E, E35D, M36I, R41K, L63C, H69K, L89M	CRF01_AE
	05TH637314	05TH637314	JN248352	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	04TH807015	04TH807015	JN248334	None			K20R, E35D, M36I, R41K, L63P, H69K, L89M, I93L	CRF01_AE
	05TH245651	05TH245651	JN248340	None			I13V, I15V, L19T, E35D, M36I, H69K, K70R, L89M	CRF01_AE
	04TH409819	04TH409819	JN248325	None			I13V, E35D, M36I, R41K, L63P, H69K, L89M	CRF01_AE
	04TH427990	04TH427990	JN248327	None			I13V, G16E, K20R, E35D, M36I, R41K, H69K, K70R, L89M, I93L	CRF01_AE
	05TH522586	05TH522586	JN248351	None			E35D, M36I, R41K, H69K, K70R, L89M	CRF01_AE
	03TH700078	03TH700078	JN248317	None			I13V, K14R, I15V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	04TH704320	04TH704320	JN248331	None			E35D, M36I, R41K, D60E, H69K, L89M, I93L	CRF01_AE
	03TH700065	03TH700065	JN248316	None			L10V, I13V, K14R, I15V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	05TH327568	05TH327568	JN248341	None			G16A, Q18H, E35D, M36I, R41K, L63P, H69K, L89M, I93L	CRF01_AE
	04TH801743	04TH801743	JN248332	None		L33I	I13V, E35D, M36I, R41K, H69K, K70R, L89M	CRF01_AE
Nazziwa (2012)	3043906	3043906	JX498976	None			I13V, I15V, L19I, E35D, M36I, R41K, R57K, H69K, L89M	CRF01_AE
	3036602	3036602	JX498985	None			I13V, E35D, M36I, R41K, H69K, L89M	CRF01_AE
	1044001	1044001