| Author (yr) |
Patient |
Isolate |
Acc# |
PIs |
Wks | PIMajorDRMs |
PIMinorDRMs |
OtherMut | Subtype |
| Caumont (2001) | AC23 | AC23 | AF326195 | None | | | | L10V, I13V, I15IV, E35D, M36I, R41K, R57K, H69K, L89M | CRF01_AE |
| Montes (2004) | MB_patRAI | 01_RAI715 | AJ577978 | None | | | | L10V, I13V, G16E, E35D, M36I, R41K, H69K, K70R, L89I | CRF01_AE |
| Tovanabutra (2004) | 99THOUR066I | 99_066I | AY358043 | None | | | | L10V, I13V, E35D, M36I, R41K, H69K, L89M | CRF01_AE |
| | 01THOUR414I | 01_414I | AY358050 | None | | | | L10V, I13V, E35D, M36I, R41K, R57K, H69K, L89M | CRF01_AE |
| | 99THOUR008I | 99_008I | AY358065 | None | | | | L10V, I13V, E35D, M36I, R41K, H69K, L89M | CRF01_AE |
| Hsu (2005) | BAA148361 | BAA148361 | AY870146 | None | | | | L10V, I13V, G16E, E35D, M36I, R41K, H69K, K70KR, I72V, L89M | CRF01_AE |
| | BAA154768 | BAA154768 | AY870166 | None | | | | L10V, I13V, E35D, M36I, R41K, R57RK, H69K, L89M | CRF01_AE |
| Ly (2005) | NL_KHM_CA56 | KHM_CA56 | DQ013562 | None | | | | L10V, I13V, E35D, M36I, R41K, H69K, K70R, L89M | CRF01_AE |
| | NL_KHM_HM14 | KHM_HM14 | DQ013580 | None | | | | L10V, I13V, G16E, E35D, M36I, R41K, H69K, L89M | CRF01_AE |
| Tee (2005) | 04MYKL1816 | 04_1816 | AY904604 | None | | | | L10V, I13V, I15V, E35D, M36I, R41K, H69K, L89M | CRF01_AE |
| | 03MYKL1316 | 03_1316 | AY904519 | None | | | | L10V, I13V, G16E, K20R, E35D, M36I, R41K, R57K, H69K, K70R, L89M | CRF01_AE |
| | 04MYKLGun7073 | 04Gun7073 | AY904602 | None | | | | L10V, I13V, G16E, E35D, M36I, R41K, H69K, K70R, L89M | CRF01_AE |
| | 03MYKL1362 | 03_1362 | AY904535 | None | | | | L10V, I13V, G16E, E35D, M36I, R41K, L63V, H69K, K70R, L89M | CRF01_AE |
| | 04MYKL1768 | 04_1768 | AY904588 | None | | | | L10V, I13V, G17E, E35D, M36I, R41K, K45R, H69K, L89M | CRF01_AE |
| Marechal (2006) | JF_005 | JF_005 | DQ443627 | None | | | | L10V, I13V, K14R, G16A, E35D, M36I, N37DE, R41K, R57K, D60E, Q61N, L63M, C67E, H69K, V77I, L89M | CRF01_AE |
| Watanaveeradej (2006) | 01TH_R2184 | 01_R2184 | AY945730 | None | | | | L10V, I13V, E35D, M36I, R41K, D60E, L63P, H69K, L89M | CRF01_AE |
| Baker (2007) | 800KN | 03-800KN | AY803483 | None | | | | L10V, I13V, K14R, G16A, E35D, M36I, R41K, R57K, H69K, L89M | CRF01_AE |
| Derache (2007) | 1178 | 1178 | EF064463 | None | | | | L10V, I13V, L19P, K20I, M36L, P39S, R41K, H69K, K70R, L89M | CRF01_AE |
| Gatanaga (2007) | C03-2066174-1 | C03-2066174-1 | AB640471 | None | | | | L10V, I13V, G16AE, E35D, M36I, R41K, K45KR, R57K, I62IV, L63LP, H69K, V77I, L89M | CRF01_AE |
| | C03-2066177-1 | C03-2066177-1 | AB640473 | None | | | | L10V, I13V, E35D, M36I, R41K, H69K, L89M | CRF01_AE |
| Liu (2007) | fj51 | fj51 | EF432684 | None | | | | L10V, I13V, M36I, R41K, H69K, L89M | CRF01_AE |
| | fj10 | fj10 | EF432719 | None | | | | L10V, I13V, M36I, R41K, H69K, L89I | CRF01_AE |
| von Wyl (2007) | 156 | 5234204 | EF449910 | None | | | | L10V, I13V, G16E, E35D, M36I, N37D, R41K, H69K, K70R, L89M | CRF01_AE |
| Chang (2008) | TW1192 | TW1192 | DQ643008 | None | | | | L10V, I13V, G16E, E35D, M36I, R41K, H69K, K70R, L89M | CRF01_AE |
| Ibe (2008) | 425 | 425 | AB356396 | None | | | | L10V, I13V, G16E, E35DN, M36I, N37DE, R41K, H69K, K70R, L89M | CRF01_AE |
| Nguyen (2008) | 041 | VN041 | | None | | | | L10V, E35D, M36I, R41K, K45R, Q61E, L63P, H69K, K70KR, A71AT, V82VI, L89M, I93IL, F99X | CRF01_AE |
| Ntemgwa (2008) | 7750 | 04CA7750 | EU220698 | None | | | | L10V, I13V, K14R, G16E, E35D, M36I, R41K, R57K, L63T, H69K, K70R, L89M | CRF01_AE |
| Rosen-Zvi (2008) | 36 | 02p36-1 | | None | | | | L10V, T12I, I13V, I15V, G16E, E35D, M36I, R41K, K45R, L63AT, H69K, I72IV, L89M | CRF01_AE |
| | 83 | 07p83-2 | | None | | | | L10V, I13V, G16E, E35D, M36I, N37D, R41K, L63S, H69K, K70R, L89M | CRF01_AE |
| | | 08p83-3 | | None | | | | L10V, I13V, E35D, M36I, N37D, R41K, L63S, H69K, K70R, L89M | CRF01_AE |
| Sirivichayakul (2008) | BED-16 | BED-16Pr | JQ364273 | None | | | | L10V, I13V, G16E, E35D, M36I, L63S, H69K, L89M | CRF01_AE |
| | NBC-16 | NBC-16Pr | JQ364316 | None | | | | L10V, I13V, I15V, E35D, M36I, R41K, H69K, L89M | CRF01_AE |
| | NBC-31 | NBC-31Pr | JQ364331 | None | | | | L10V, E35D, M36I, R41K, H69K, K70R, L89M | CRF01_AE |
| | NBC-33 | NBC-33Pr | JQ364333 | None | | | | L10V, I13V, E35D, M36I, R41K, L63S, H69K, L89M | CRF01_AE |
| | NBC-39 | NBC-39Pr | JQ364339 | None | | | | L10V, I13V, K14R, E35D, M36I, R41K, H69K, L89M | CRF01_AE |
| Aghokeng (2009) | CDB0003 | CDB0003 | GU191634 | None | | | | L10V, I13V, K14KN, I15V, G16A, E35D, M36I, R41K, I62V, L63V, I64L, H69K, L89M | CRF01_AE |
| Auwanit (2009) | 65 | AE-PR65 | FJ463519 | None | | | | L10V, E35D, M36I, R41K, H69K, L89M | CRF01_AE |
| | 107 | AE-PR107 | FJ463532 | None | | | | L10V, I13V, M36I, R41K, L63S, H69K, L89M | CRF01_AE |
| Ayouba (2009) | FD0414 | FD0414PI | GQ352063 | None | | | | L10V, I13V, G16E, E35D, M36I, R41K, H69K, L89M | CRF01_AE |
| | FD0492 | FD0492PI | GQ352109 | None | | | | L10V, T12TA, I13V, I15V, E35D, M36I, R41K, R57K, L63V, H69K, L89M | CRF01_AE |
| | FD0526 | FD0526PI | GQ352076 | None | | | | L10V, I13V, E35D, M36I, R41K, L63T, H69K, L89M | CRF01_AE |
| | FD0731 | FD0731PI | GQ352096 | None | | | | L10V, I13V, E35D, M36I, R41K, H69K, L89M | CRF01_AE |
| Brumme (2009) | A7531 | A7531 | GQ371781 | None | | | | L10V, I13V, I15V, G16E, E35D, M36I, R41K, L63C, H69K, L89M | CRF01_AE |
| Ishizaki (2009) | A2_92 | A2_92 | FJ007004 | None | | | | L10V, I13V, G16E, E35D, M36I, R41K, H69K, L89M | CRF01_AE |
| | A2_177 | A2_177 | FJ007026 | None | | | | L10V, I13V, I15V, E35D, M36I, R41K, H69K, L89M | CRF01_AE |
| | A2_190 | A2_190aagg | FJ007032 | None | | | | L10V, I13V, M36I, R41K, H69K, L89M | CRF01_AE |
| | A2_445 | A2_445 | FJ007101 | None | | | | L10V, I13V, E35D, M36I, R41K, H69K, K70R, L89M | CRF01_AE |
| | A150 | A150 | FJ007172 | None | | | | L10V, I13V, G16E, E35D, M36I, R41K, H69K, K70R, L89M | CRF01_AE |
| | A227 | A227 | FJ007221 | None | | | | L10V, I13V, G16E, E35D, M36I, R41K, H69K, L89M | CRF01_AE |
| | A400 | A400-07 | FJ007313 | None | | | | L10V, I13V, K14R, E35E_N, M36I, R41K, H69K, L89M | CRF01_AE |
| Luo (2009) | wh.1890 | 06HBwh.1890 | FJ375097 | None | | | | L10V, I13V, K14R, E35D, M36I, R41K, R57K, H69K, L89M | CRF01_AE |
| Nouhin (2009) | KC04 | KC04PROT | FJ531942 | None | | | | L10V, K14KR, G16E, E35D, M36I, N37D, R41K, L63Q, H69K, L89M, Q92K | CRF01_AE |
| Tu (2009) | 37 | PBMC37 | EU518279 | None | | | L33F | L10V, I13V, M36V, P39Q, R41K, H69K, L89M, I93V | CRF01_AE |
| | | plasma37 | EU518328 | None | | | L33F | L10V, I13V, M36V, P39Q, R41K, H69K, L89M, I93V | CRF01_AE |
| Vercauteren (2009) | pt1807 | 2481643443 | GQ399217 | None | | | | L10V, I13V, E35D, M36I, N37D, R41K, H69K, L89M | CRF01_AE |
| | pt1672 | 3311242754 | GQ399352 | None | | | | L10V, I13V, G16E, K20R, E35D, M36I, R41K, L63P, H69K, L89M, I93L | CRF01_AE |
| Bonura (2010) | 1193_88 | 1193_88 | GU969548 | None | | | V11I | L10V, T12A, I13V, G16E, K20I, E35D, M36I, R41K, L63V, H69K, L89M | CRF01_AE |
| Chin (2010) | C181 | C181 | GQ290718 | None | | | | L10V, I13V, K14R, G16E, E35D, M36I, R41K, H69K, K70R, L89M | CRF01_AE |
| Jullaksorn (2010) | CR20 | CR20-Apr08D | GQ857298 | None | | | | L10V, I13V, K14R, G16E, E35D, M36I, R41K, H69K, K70R, L89M | CRF01_AE |
| | | CR20-Jul08D | GQ857330 | None | | | | L10V, I13V, K14R, G16E, M36I, R41K, H69K, K70R, L89M | CRF01_AE |
| | | CR20-Oct08D | GQ857362 | None | | | | L10V, I13V, K14R, G16E, E35D, M36I, R41K, H69K, K70R, I72V, L89M | CRF01_AE |
| | | CR20-Jan09D | GQ857395 | None | | | | L10V, I13V, K14R, G16E, E35D, M36I, R41K, H69K, K70R, I72V, L89M | CRF01_AE |
| | | CR20-Apr09D | GQ857426 | None | | | | L10V, I13V, K14R, G16E, E35D, M36I, R41K, H69K, K70R, L89M | CRF01_AE |
| | CR21 | CR21-Jan09D | GQ857396 | None | | | | L10V, T12P, E35D, M36I, R41K, L63T, H69K, L89M | CRF01_AE |
| | CR35 | CR35-Oct08D | GQ857374 | None | | | | L10V, I13V, E35D, M36I, R41K, H69K, L89M | CRF01_AE |
| Phan (2010) | ND23 | ND23 | AB519459 | None | | | | L10V, I13V, G16E, E35D, M36I, R41K, Q61E, H69K, K70R, V82I, L89M | CRF01_AE |
| | ND39 | ND39 | AB519465 | None | | | | L10V, I13V, G16E, K20R, E35D, M36I, R41K, H69K, L89M | CRF01_AE |
| | O935 | O935 | AB519506 | None | | | | L10V, T12P, I13X, G16E, E35D, M36I, R41K, L63V, H69K, L89M | CRF01_AE |
| | AH36 | AH36 | AB519585 | None | | | | L10V, I13V, G16E, E35D, M36I, R41K, H69K, L89M | CRF01_AE |
| | ND09 | ND09 | AB519597 | None | | | | L10V, I13V, G16E, K20R, E35D, M36I, R41K, H69K, I72T, L89I | CRF01_AE |
| Zolfo (2010) | A14683 | A 14683 M6 | HM565641 | None | | | | L10V, K20R, E35D, M36I, R41K, Q61E, L63P, H69K, L89M | CRF01_AE |
| | | A 14683 M12 | HM565688 | None | | | | L10V, K20R, E35D, M36I, R41K, Q61E, L63P, H69K, L89M | CRF01_AE |
| | | A 14683 M18 | HM565621 | None | | | | L10V, K14R, K20R, E35D, M36I, R41K, Q61E, L63P, H69K, L89M | CRF01_AE |
| | A12855 | A 12855 M12 | HM565671 | None | | | | L10V, I13V, I15V, E35D, M36I, R41K, H69K, L89M | CRF01_AE |
| | A15349 | A 15349 M12 | HM565675 | None | | | | L10V, I13V, E35D, M36I, R41K, H69K, K70R, L89M | CRF01_AE |
| | A15056 | A 15056 M12 | HM565684 | None | | | | L10V, I13V, G16E, K20R, M36I, R41K, L63S, H69K | CRF01_AE |
| | A15615 | A 15615 M6 | HM565687 | None | | | | L10V, I13V, G16E, E35D, M36I, R41K, Q61E, H69K, K70R, L89M | CRF01_AE |
| | | A 15615 M12 | HM565614 | None | | | | L10V, I13V, G16E, E35D, M36I, R41K, Q61E, H69K, K70R, L89M | CRF01_AE |
| | A15442 | A 15442 M6 | HM565693 | None | | | | L10V, I13V, G16E, E35D, M36I, R41K, L63C, H69K, K70R, L89M | CRF01_AE |
| | A14643 | A 14643 M12 | HM565694 | None | | | | L10V, I13V, G16E, E35D, M36I, R41K, H69K, K70KR, L89M | CRF01_AE |
| Bontell (2011) | Pat048 | 08.VL768Hs | HQ852868 | None | | | | L10V, I13V, K14R, G16E, E35D, M36I, R41K, H69K, L89M | CRF01_AE |
| | Pat035 | 08.VL786Us | HQ852881 | None | | | | L10V, I13V, M36I, R41K, H69K, L89M | CRF01_AE |
| | Pat034 | 08.VL787U | HQ852882 | None | | | | L10V, I13V, G16E, E35D, M36I, R41K, H69K, I72V, L89M | CRF01_AE |
| | Pat031 | 09.VL790Yi | HQ852885 | None | | | | L10V, I13V, G16E, E35D, M36I, R41K, H69K, L89M | CRF01_AE |
| | Pat023 | 09.VL953Hi | HQ852893 | None | | | | L10V, I13V, E35D, M36I, R41K, H69K, L89M | CRF01_AE |
| | Pat020 | 09.VL956Hi | HQ852896 | None | | | | L10V, I13V, G16E, E35D, M36I, R41K, H69K, L89M | CRF01_AE |
| | Pat001 | 09.VL987Us | HQ852915 | None | | | | L10V, I13V, I15V, G16A, M36I, R41K, I62V, H69K, L89M | CRF01_AE |
| Bunupuradah (2011) | 079-008-005 | 079-008-005Pr | | None | | | | L10V, I13V, K14R, E35D, M36I, R41K, H69K, L89M | CRF01_AE |
| | 079-008-008 | 079-008-008Pr | | None | | | | L10V, T12P, I13V, I15V, G16E, E35D, M36I, R41K, R57K, Q61E, H69K, K70R, L89M | CRF01_AE |
| Dean (2011) | IVVI0100 | IVVI0100 | JQ312338 | None | | | | L10V, I13V, K14R, Q18H, E35D, M36I, R41K, H69K, L89M | CRF01_AE |
| | IVVI0138 | IVVI0138 | JQ312347 | None | | | | L10V, I13V, Q18H, M36IT, R41K, H69K, L89M | CRF01_AE |
| | IVVI0176 | IVVI0176 | JQ312354 | None | | | | L10V, I13V, Q18H, M36T, R41K, H69K, L89M | CRF01_AE |
| | IVVI7396 | IVVI7396 | JQ312421 | None | | | | L10V, K14R, G16E, M36I, N37D, R41K, L63T, H69K, L89M, I93L | CRF01_AE |
| Hamers (2011) | CP076301591 | CP076301591 | HQ993629 | None | | | L33F | L10V, E35D, M36I, N37D, R41K, K45R, R57K, Q61H, L63P, H69K, I72IT, I85V, L89M | CRF01_AE |
| Kao (2011) | Pat130 | 36267 | HQ657910 | None | | | | L10V, I13V, G16E, E35D, M36I, N37K, R41K, L63C, H69K | CRF01_AE |
| | Pat050 | 36627 | HQ657990 | None | | | | L10V, I13V, G16E, M36I, R41K, K45R, L63H, H69K, K70R, L89M, I93L | CRF01_AE |
| Lazaro (2011) | VT-M18 | VT-M18 | HQ542646 | None | | | | L10V, I13V, G16A, K20R, E35D, M36I, N37D, R41K, K43KR, L63C, H69K, K70KR, L89M | CRF01_AE |
| | VT-M12 | VT-M12 | HQ542640 | None | | | | L10V, I13IV, I15IV, G16E, E35D, M36I, R41K, L63C, H69K, L89LM | CRF01_AE |
| | VT-M13 | VT-M13 | HQ542641 | None | | | | L10V, I13V, G16E, K20R, E35D, M36I, R41K, L63C, H69K, L89M | CRF01_AE |
| | VT-M15 | VT-M15 | HQ542643 | None | | | | L10V, I13V, G16E, E35D, M36I, R41K, L63C, H69K, L89M | CRF01_AE |
| | VT-M20 | VT-M20 | HQ542648 | None | | | | L10V, I13IV, G16E, E35D, M36I, R41K, L63C, H69K | CRF01_AE |
| | DT-M4 | DT-M4 | HQ542692 | None | | | | L10V, I13V, E35D, M36I, R41K, L63P, H69K, K70R, L89M | CRF01_AE |
| Ngo-Giang-Huong (2011) | PHPT2522 | PHPT2522PR-RT | HQ996499 | None | | | | L10V, I13V, K14R, G16E, E35D, M36I, N37E, R41K, H69K, K70R, L89M | CRF01_AE |
| Su (2011) | LZ2009 | LZ2009 | HQ588184 | None | | | | L10V, I13V, E35D, M36I, R41K, H69K, L89M | CRF01_AE |
| | LZ2151 | LZ2151 | HQ588225 | None | | | | L10V, I15V, E35D, M36I, R41K, H69K, L89M, I93L | CRF01_AE |
| | LZ2164 | LZ2164 | HQ588230 | None | | | | L10V, I13V, G16E, M36I, R41K, H69K, L89M | CRF01_AE |
| Ye (2011) | BJ07627 | BJ07627 | JF906691 | None | | | | L10V, I13V, G16E, L19I, E35D, M36I, R41K, K45R, H69K, K70R, L89M | CRF01_AE |
| Zeng (2011) | U4 | U4 | JF505567 | None | | | | L10V, I13V, E35D, M36I, R41K, H69K, K70R, L89M | CRF01_AE |
| | K6 | K6 | JF505566 | None | | | | L10V, I13V, G16E, E35D, M36I, R41K, H69K, K70R, L89M | CRF01_AE |
| An (2012) | 10LNA124 | 10LNA124 | JX960609 | None | | | | L10V, I13V, K14R, G16E, E35D, M36I, R41K, H69K, K70Q, L89M, Q92K | CRF01_AE |
| | 10LNA819 | 10LNA819 | JX960610 | None | | | | L10V, I13V, K14R, G16E, E35D, M36I, R41K, H69K, K70Q, L89M, Q92K, C95Y | CRF01_AE |
| Chen (2012) | YN09DH0046 | YN09DH0046 | JQ658516 | None | | | | L10V, I13V, I15IM, E35D, M36I, N37D, R41K, R57K, H69K, L89M, I93L | CRF01_AE |
| | YN09DH0099 | YN09DH0099 | JQ658563 | None | | | | L10V, I13V, G16E, E35D, M36I, R41K, L63I, H69K, I72IV, L89M, I93IV | CRF01_AE |
| | YN09DH0165 | YN09DH0165 | JQ658622 | None | | | | L10V, I13V, G16E, E35D, M36I, R41K, L63I, H69K, L89M, I93IV | CRF01_AE |
| De Gascun (2012) | IRL25181 | IRL25181 | JN622221 | None | | | | Q7QR, L10V, I13V, G16E, K20I, E35D, M36I, N37NY, R41K, K45KN, L63V, H69K, G78GA, I85IM, L89M | CRF01_AE |
| | IRL35854 | IRL35854 | JN622222 | None | | | | L10V, I13V, I15V, K20R, M36I, N37ND, R41RK, L63S, H69K, K70R, L89M | CRF01_AE |
| | IRL39248 | IRL39248 | JN622223 | None | | | | L10V, I13V, K20R, M36I, R41K, L63S, H69K, K70R, L89M | CRF01_AE |
| | IRL54561 | IRL54561 | JN622233 | None | | | | L10V, T12A, I13V, G16E, K20I, E35D, M36I, R41K, L63V, H69K, L89M | CRF01_AE |
| Hassan (2012) | RS09000868 | RS09000868 | HQ441613 | None | | | | L10V, I13V, G16E, E35ED, M36I, R41K, L63V, H69K, L89M, T91V, I93L | CRF01_AE |
| Karlsson (2012) | SE_56 | SE_56 | JQ698706 | None | | | | L10V, I13V, G16E, E35D, M36I, R41K, H69K, L89M | CRF01_AE |
| | SE_287 | SE_287 | JQ698864 | None | | | | L10V, I13V, K14R, E35D, M36I, R41K, H69K, L89M | CRF01_AE |
| Kijak (2012) | 05TH130087 | 05TH130087 | JN248339 | None | | | | L10V, T12I, I13V, G16E, E35D, M36I, R41K, L63N, H69K, L89M, I93L | CRF01_AE |
| | 04TH817196 | 04TH817196 | JN248336 | None | | | | L10V, I13V, L19I, K20R, E35D, M36I, R41K, L63I, H69K, V77A, L89M | CRF01_AE |
| | 04TH613543 | 04TH613543 | JN248330 | None | | | | L10V, T12P, I13V, G16E, E35D, M36I, R41K, L63C, H69K, L89M | CRF01_AE |
| | 03TH700065 | 03TH700065 | JN248316 | None | | | | L10V, I13V, K14R, I15V, E35D, M36I, R41K, H69K, L89M | CRF01_AE |
| Nazziwa (2012) | 1044001 | 1044001 | JX498989 | None | | | | L10V, I13V, E35D, M36I, R41K, H69K, L89M | CRF01_AE |
| | 3067801 | 3067801 | JX498995 | None | | | | L10V, I13V, G16E, E35D, M36I, R41K, R57K, D60E, L63LP, I66IM, H69K, K70R, L89M | CRF01_AE |
| Rolland (2012) | AA003b12L | AA003b12L | JX446691 | None | | | | L10V, I13V, E35D, M36I, R41K, K45R, R57K, H69K, L89M | CRF01_AE |
| | AA025a_WG9 | AA025a_WG9 | JX447006 | None | | | | L10V, I13V, K14R, G16E, E35D, M36I, N37K, R41K, L63C, H69K | CRF01_AE |
| | AA029b02L | AA029b02L | JX447037 | None | | | | L10V, I13V, G16E, K20R, E35D, M36I, R41K, H69K, I72V, L89M | CRF01_AE |
| | AA038a_WG3 | AA038a_WG3 | JX447132 | None | | | | L10V, I13V, E35D, M36I, R41K, H69K, L89M | CRF01_AE |
| | AA072a05 | AA072a05 | JX447504 | None | | | | L10V, I13V, I15V, E35D, M36I, R41K, L63P, H69K, L89M | CRF01_AE |
| | AA073a_LH5 | AA073a_LH5 | JX447512 | None | | | | L10V, I13V, E35D, M36I, R41K, K43R, H69K, V82I, L89M | CRF01_AE |
| | AA076a01L | AA076a01L | JX447545 | None | | | | L10V, I13V, G16E, E35D, M36I, R41K, H69K, K70R, L89M | CRF01_AE |
| | AA088a_wg12 | AA088a_wg12 | JX447710 | None | | | | L10V, I13V, G16E, E35D, M36I, R41K, H69K, L89M | CRF01_AE |
| | AA098a02L | AA098a02L | JX447867 | None | | | | L10V, I15V, G16E, K20R, E35D, M36I, R41K, G68E, H69K, L89M, I93L | CRF01_AE |
| | AA122a09L | AA122a09L | JX448211 | None | | | | L10V, I13V, K14R, G16E, E34K, E35D, M36I, R41K, K43R, H69K, L89M | CRF01_AE |
| Ssemwanga (2012) | RCC_TDR_480069 | RCC_TDR_480069 | JQ266046 | None | | | | L10V, I13V, K14R, E35D, M36I, R41K, R57K, L63A, H69K, L89M | CRF01_AE |
| Ssemwanga (2012) | 2917HR | 2917HR | JF800194 | None | | | | L10V, I13V, I15V, G16E, K20R, E35D, M36I, R41K, K45R, R57K, L63V, C67G, H69K, L89M | CRF01_AE |
| | 4183HR | 4183HR | JF800201 | None | | | | L10V, I13V, G16E, E35D, M36I, R57K, H69K, K70R, L89M | CRF01_AE |
| | 6891HR | 6891HR | JF800228 | None | | | | L10V, I13V, K14R, G16E, E35D, M36I, R41K, R57K, H69K, L89M | CRF01_AE |
| Tran (2012) | HPA190 | HPA190 | AB690902 | None | | | | L10V, I13V, G16E, E35N, M36I, R41K, H69K, L89M | CRF01_AE |
| | HPA358 | HPA358 | AB690938 | None | | | | L10V, I13V, K14R, G16GE, M36I, R41K, H69K, L89M | CRF01_AE |
| | HPC008 | HPC008 | AB690949 | None | | | | L10V, T12TP, I13V, E35D, M36I, R41K, H69K, L89M | CRF01_AE |
| Trinh (2012) | VN-83 | VN-83 | GQ161867 | None | | | | L10V, I13V, G16E, E35D, M36I, R41K, H69K, K70R, L89M | CRF01_AE |
| Yang (2012) | 3732 | 3732 | JQ617208 | None | | | | W6WL, L10V, I13V, G16E, E35D, M36I, R41K, H69K, L89M | CRF01_AE |
| | 3743 | 3743 | JQ617219 | None | | | | L10V, T12TA, I13V, K14KR, G16E, E35D, M36I, R41K, L63C, H69K, L89M, T91IV, L97LI | CRF01_AE |
| | 3748 | 3748 | JQ617224 | None | | | | L10V, I13V, G16E, K20R, E35D, M36I, N37D, R41K, H69K, K70R, L89M | CRF01_AE |
| | 3752 | 3752 | JQ617228 | None | | | | L10V, I13V, K14R, K20R, E35D, M36I, R41K, L63P, H69K | CRF01_AE |
| | 3764 | 3764 | JQ617240 | None | | | | W6WL, L10V, I13IV, G16E, E35D, M36I, R41K, R57K, L63C, H69K, K70KR, L89M | CRF01_AE |
| | 3774 | 3774 | JQ617250 | None | | | | L10V, I13V, G16E, K20R, E35D, M36I, R41K, L63C, H69K, L89M | CRF01_AE |
| Yang (2012) | GZ005 | GZ005 | JN848844 | None | | | | L10V, I13V, G16E, E35D, M36I, R41K, H69K, K70R, L89M | CRF01_AE |
| | GZ032 | GZ032 | JN848851 | None | | | | L10V, I13V, G16E, L19I, E35D, M36I, R41K, H69K, L89M | CRF01_AE |
| | GZ219 | GZ219 | JN848906 | None | | | | L10V, I13V, K14R, G16E, E35D, M36I, R41K, H69K, L89M | CRF01_AE |
| Frentz (2013) | EHR-17366 | EHR-17366 | JX299831 | None | | | | L10V, I13V, I15V, E35D, M36I, R41K, H69K, L89M | CRF01_AE |
| | EHR-22510 | EHR-22510 | JX299927 | None | | | | L10V, I13V, K14R, I15IV, K20KR, E35D, M36I, N37D, R41K, H69K, L89M | CRF01_AE |
| | EHR-49574 | EHR-49574 | JX300364 | None | | | | L10V, I13V, G16E, K20KR, E35D, M36I, N37D, R41K, I62IV, H69K, K70R, I72V, L89M | CRF01_AE |
| | EHR-66889 | EHR-66889 | JX300666 | None | | | | L10V, I13V, E35D, M36I, R41K, R57K, H69K, I72M, L89M | CRF01_AE |
| | EHR-68427 | EHR-68427 | JX300692 | None | | | | L10V, I15V, K20R, E35D, M36I, R41K, R57K, L63V, H69K | CRF01_AE |
| | EHR-77470 | EHR-77470 | JX300874 | None | | | | L10V, I13V, G16E, E35D, M36I, R41K, L63V, H69K, K70R, L89M | CRF01_AE |
| | EHR-80323 | EHR-80323 | JX300907 | None | | | | L10V, I13V, K14KR, E35D, M36I, R41K, R57RK, L63V, C67CY, H69K, L89M | CRF01_AE |
| Hawke (2013) | 11274164 | 11274164 | KC237887 | None | | | | L10V, I13V, G16E, E35D, M36I, R41K, L63T, H69K, L89M | CRF01_AE |
| | 16256286 | 16256286 | KC237974 | None | | | | L10V, I13V, I15V, G16E, E35D, M36I, R41K, L63V, H69K, L89M | CRF01_AE |
| Li (2013) | 2819 | 2819 | JQ901035 | None | | | | L10V, E35D, M36I, R41K, H69K, L89M | CRF01_AE |