Protease Inhibitors

HOME Genotype-Rx Genotype-Pheno Genotype-Clinical hivdb program

Protease Inhibitors

Subtype	C
Gene	PR
Mutation	I93L
Rx	>= 1 PI
IncludeMixtures	No

References	46
Patients	428
Isolates	510

Sequences matching input query are shown below. Original reference, patient identifier, isolate name, partial treatment histories and accession number are indicated. Complete treatment histories, when available, can be accessed by clicking the isolate name. Sequences may additionally be downloaded in the fasta format, or viewed as individual or composite alignments using the options above. If the user wishes to view individual alignments of isolates for which there are multiple clones, the user can choose to view either an alignment of consensus sequences derived from the clones or an alignment of each clone as well as a consensus sequence.

Author (yr)	Patient	Isolate	Acc#	PIs	Wks	PIMajorDRMs	PIMinorDRMs	OtherMut	Subtype
Gonzales (2001)	CA4490	CA11062	AF331699	SQV	14			T12S, I15V, L19I, M36I, R41K, K45KR, L63P, H69K, L89LM, I93L	C
Weidle (2001)	PW_UG477	PW_UG477a		SQV	24			K20R, M36I, R41K, Q61E, H69K, V82VI, L89M, I93L	C
		PW_UG477b		SQV	73			K20R, M36I, R41K, Q61E, H69K, K70KE, L89M, I93L	C
Yahi (2001)	NY_M6	M6	AY010422	SQV				T12S, I15V, G16E, L19Q, M36I, N37R, R41N, Q61N, L63A, H69K, V82I, L89M, I93L	C
	NY_M62	M62	AY010425	SQV				T12S, I15V, G16E, L19Q, M36I, N37R, R41N, Q61N, L63A, H69K, V82I, L89M, I93L	C
Cuevas (2002)	CU10	CU10	AF425391	SQV				T12S, I15V, L19I, M36I, N37S, R41K, H69K, L89M, I93L	C
Gibb (2002)	DMG104	104_w66		NFV	66	N88S	Q58QE	T12S, I15V, L19I, K20T, E35D, M36I, R41K, K45R, D60E, Q61E, L63P, H69K, L89M, I93L	C
	DMG59	59_w7		NFV	7		K43T	T12S, I15V, L19I, M36I, R41K, I62V, L63P, I64M, H69K, L89M, I93L	C
		59_w32		NFV	32		L76LF	I13V, M36I, R41K, L63S, I64IL, H69K, L89M, I93L	C
	DMG78	78_w9		NFV	9	D30DN, L90LM	L89MV	T12S, I15V, L19I, E35D, M36L, N37E, D60E, L63P, I64IV, H69K, I93L	C
		78_w30		NFV	30	D30N	N88ND, L89MV	T12S, I13IV, I15V, L19I, E35D, M36L, N37E, K45KQR, D60E, L63P, H69K, I93L	C
	DMG80	80_w32		NFV	32			T12S, I15V, L19V, M36I, N37NS, R41K, R57K, L63P, H69K, I72IL, I93L	C
	DMG83	83_w4		NFV	4			T12S, I15V, L19I, M36L, R41K, D60E, L63P, H69K, L89M, I93L	C
		83_w31		NFV	31			T12S, I15V, L19I, M36L, R41K, D60E, L63P, H69K, L89M, I93L	C
		83_w49		NFV	49			T12S, I15V, L19I, M36L, R41K, D60E, L63P, H69K, L89M, I93L	C
	DMG85	85_w19		NFV	17			T12S, I15V, L19I, E35D, M36I, R41K, D60DE, L63LAPV, H69K, V82I, L89M, I93L	C
		85_w29		NFV	27			T12S, I15V, L19I, E35D, M36I, R41K, K45R, D60E, Q61E, L63P, H69K, L89M, I93L	C
		85_w50		NFV	36			T12S, I15V, L19I, K20KT, E35D, M36I, R41K, L63LV, H69K, V82I, L89M, I93L	C
	DMG86	86_w82		NFV	65	D30N	L10F, N88D, L89V	T12S, I13V, I15V, L19I, E35D, M36L, N37E, K45R, D60E, L63P, H69K, I93L	C
	DMG91	91_w22		NFV	22	D30N	L10F, N88D, L89V	T12S, I13V, I15V, L19I, E35D, M36L, N37E, K45R, D60E, L63P, H69K, I93L	C
	DMG95	95_w75		NFV	75			I15V, E35D, M36I, R41K, D60E, Q61E, L63P, H69K, L89M, I93L	C
Kantor (2002)	TCDD-01	TCDD-01	AY090840	NFV	22			T12S, I15V, L19I, K20R, E35D, M36I, N37D, R41K, R57K, I62V, L63I, E65D, H69K, V82I, L89M, I93L	C
	TCDD-02	TCDD-02_1	AY090841	IDV, SQV	86			T12S, I15V, L19I, M36I, R41K, H69K, L89M, I93L	C
	TCDD-04	TCDD-04	AY090843	NFV, APV	38			T12S, I15V, L19I, D25DN, M36I, R41K, L63P, H69K, I93L	C
	TCDD-05	TCDD-05_1	AY090844	SQV	38	L90M		T12S, I15V, L19I, M36I, R41K, L63P, H69K, A71V, I93L	C
	TCDD-08	TCDD-08_1	AY090845	SQV	95			I15V, L19I, M36I, R41K, D60E, L63T, H69K, I72IT, T74S, L89M, I93L	C
	TCDD-13	TCDD-13_1	AY090847	SQV	69			T12TS, I15V, L19LI, L24L*, M36I, R41K, L63LAPV, H69K, V82I, L89LM, I93L	C
	TCDD-22	TCDD-22	AY090849	SQV, IDV	17			I15V, L19I, M36I, R41K, L63A, H69K, I93L	C
	TCDD-25	TCDD-25	AY090851	IDV, SQV, RTV	49			T12S, I15V, L19I, M36I, L63LP, H69K, L89LM, I93L	C
	TCDD-26	TCDD-26	AY090852	SQV	38			I15V, L19X, M36I, R41K, L63V, H69K, V82I, L89M, I93L	C
	TCDD-27	TCDD-27	AY090853	SQV	149			T12S, I13V, I15V, G16E, L19I, K20R, M36I, R41K, H69K, I93L	C
	TCDD-28	TCDD-28_1	AY090854	SQV	279	L90M	G73GS	I15V, L19I, M36I, R41K, L63P, H69K, A71V, I93L	C
	TCDD-29	TCDD-29	AY090855	SQV	140	L90M		I15V, G16E, K20KR, E21EK, E35D, M36I, P39S, R41K, K45R, D60E, L63P, H69K, A71AV, L89M, I93L, F99X	C
	TCDD-32	TCDD-32	AY090858	RTV	18			T12S, I13LV, K14EQ, L19I, E35D, M36I, R41K, L63V, H69K, T74S, L89M, I93L	C
	TCDD-33	TCDD-33	AY090859	IDV	135			T12S, I15IV, L19I, K20R, M36I, R41K, H69K, L89M, I93L	C
	TCDD-35	TCDD-35_1	AY090860	NFV, IDV	97		G73S	T12S, I15V, L19I, M36I, R41K, D60E, L63AP, H69K, V75I, I93L	C
	TCDD-23	TCDD-23_1	AY090850	SQV	205	L90M		I15V, L19I, M36I, R41K, D60E, L63P, H69K, V82I, L89M, I93L	C
Snoeck (2002)	BE4	BE4b		NFV	48			K14R, I15V, L19I, E35D, M36I, R41K, H69K, L89M, I93L	C
	BE8	BE8	AF338992	IDV	80			I15V, L19V, E35D, M36L, R41K, L63V, H69K, T74S, L89M, I93L	C
	BE16a	BE16a	AF339009	IDV	107	M46I, V82A	L24I	L10IM, T12TS, I15V, L19T, M36I, R41K, K43KN, R57RS, D60E, Q61E, L63P, H69K, L89M, I93L	C
Johnston (2003)	TC-59	TC-59		APV	47			T12S, I15V, L19I, M36I, R41K, L63P, H69K, V82VI, L89M, I93L	C
	TC-60	TC-60		IDV	104	I54IV, V82A		I15V, E35D, M36I, R41K, L63P, H69K, A71AT, I93L	C
	TC-71	TC-71		IDV	52	G48V, I54T, V82A		L10I, I15V, L19I, K20R, E35D, M36I, R41K, L63V, H69K, A71V, T74S, L89M, I93L	C
Monno (2003)	ML_Pat11	ML_Pat11		PI	NA			I15V, M36I, N37K, R41N, H69K, L89M, I93L	C
Shafer (2003)	A384_0973	0973b	EF548178	Unknown, RTV, IDV	>5			I15V, L19IMT, M36I, R41K, H69K, K70KR, V82I, L89M, I93L	C
	A384_0601	0601b	EF548284	NFV	43	M46ML		T12S, I15V, L19I, M36I, N37S, R41K, H69K, L89M, I93L	C
	A384_3441	3441b	EF549036	NFV	32			T12S, I15V, L19T, K20R, M36L, R41K, L63P, H69K, I93L	C
	A384_6000	6000b	EF549368	NFV	10			T12S, K14R, I15V, L19I, M36L, N37S, R41K, H69K, L89M, I93L	C
Soares (2003)	BR52	BR52	AY275739	NFV, SQV, RTV	199			I15V, N37K, R41N, D60E, H69K, L89M, I93L	C
	BR2	BR2	AY275720	IDV, RTV	57			I15V, N37K, R41N, H69K, L89M, I93L	C
	BR49	BR49	AY275735	SQV, NFV, LPV	255			I15V, M36T, N37K, R41N, H69K, L89M, I93L	C
	BR54	BR54	AY275730	NFV	56			T12A, I13V, G16E, L19I, M36I, N37K, R41N, L63T, H69K, L89M, I93L	C
	BR58	BR58	AY275748	NFV	163			I15V, M36I, N37K, R41N, L63P, H69K, I93L	C
	BR61	BR61	AY275752	NFV	221			K14R, I15V, M36I, N37K, R41N, L63P, H69K, L89M, I93L	C
Weber (2003)	85H	610185H-12	AY140821	RTV	13			L10I, T12S, I15V, L19I, E35D, M36I, R41K, L63V, H69K, T74S, V77I, L89M, I93L	C
		610185H-48	AY140823	RTV	48	I54V, V82A		L10I, T12S, I15V, L19I, E35D, M36I, R41K, L63V, H69R, T74S, V77I, L89M, I93L	C
Colonno (2004)	RC-008-060-076	060-07621	AY461494	ATV	80	I50L		T12S, I15V, L19I, K20R, E35D, M36I, R41K, H69K, L89M, I93L	C
	RC-007-045-235	045-2351	AY461491	ATV		M46I, I50IL		T12S, I15V, L19T, E35D, M36I, R41K, K45R, K55H, R57K, L63IT, H69K, I93L	C
	RC-008-060-169	060-1691	AY461495	ATV		I50L		T12S, I15V, G16GE, L19I, K20R, E35D, M36I, R41K, H69KQ, L89M, I93L	C
	RC-008-060-510	060-5101	AY461496	ATV		I50L	L89MV	T12S, I15V, G16GE, L19I, K20KT, E35ED, M36I, R41K, K45R, D60E, L63LP, I64IV, H69K, A71AV, I85IV, I93L	C
	RC-034-067-562	067-5621	AY461501	ATV		I50L		K14R, I15V, L19I, K20T, E34EK, E35D, M36I, N37D, R41K, K55KN, D60E, I64IV, H69K, A71V, L89MT, I93L	C
	RC-034-076-586	076-5861	AY461502	ATV		I50L		T12S, I15V, L19I, M36I, R41K, K45N, L63P, H69K, L89M, I93L	C
Dumans (2004)	172	172	AY390191	NFV	23			I15V, M36I, N37K, R41N, H69K, L89M, I93L	C
Gomez-Carrillo (2004)	96105	96105	AY365516	PI	NA			T12A, I15S, G16R, E35D, M36I, N37K, R41N, L63T, H69K, I72T, T74S, L89M, I93L	C
Grossman (2004)	IL81	IL81	AY529533	NFV	13			I15V, M36I, R41K, L63P, H69K, L89M, I93L	C
	IL128	IL128a	AY529541	NFV	30		L23LI	I13IK, M36I, G40GE, R41K, H69K, L89M, I93L	C
		IL128b	AY529542	NFV	41	D30N		K14N, A22G, M36I, R41K, H69K, L89M, I93L	C
		IL128c	AY529543	NFV	52			I15IV, D29DV, E35D, M36I, R41K, L63LP, H69K, L89M, I93L	C
		IL128d	AY529544	NFV	65	D30DN		I15IK, E35D, M36I, R41K, L63P, I64IL, E65ED, H69K, L89M, I93L	C
		IL128e	AY529545	NFV	74	D30N		K14N, E35D, M36I, R41K, L63LP, H69K, L89M, I93L	C
	IL198	IL198a	AY529561	IDV	7			T12S, I15V, L19T, M36I, R41K, H69K, T74A, L89M, I93L	C
		IL198b	AY529562	IDV	51			T12S, I15V, L19T, M36I, R41K, H69K, T74A, L89M, I93L	C
		IL198c	AY529563	IDV	69			W6L, T12S, I15V, G16R, L19T, M36I, R41K, H69K, T74A, L89M, I93L	C
	IL201	IL201a	AY529564	IDV	16			L10I, T12S, I15V, L19T, M36I, R41K, L63P, I64L, H69K, K70KE, L89M, I93L	C
		IL201c	AY529566	IDV	83			L10I, T12S, I15V, L19T, M36I, L63P, I64L, H69K, L89T, I93L	C
	IL48	IL48	AY529529	IDV	136			I15V, E35D, M36I, R41K, K45R, H69K, L89M, I93L	C
	IL49	IL49	AY529530	NFV	64	N88NS, L90LM		Q7QK, L10LI, I15V, G16E, K20RT, E35D, M36I, L38LM, R41RK, R57K, L63T, H69K, T74TS, L89M, I93L	C
	IL77	IL77b	AY529531	NFV	1	M46MI		G16X, K20R, M36I, N37D, R41K, H69K, L89M, I93L	C
		IL77a	AY529532	NFV	48			K20R, L24L*, M36I, N37D, R41K, H69K, L89M, I93L	C
	IL86	IL86	AY529534	IDV	58			K14R, I15V, M36I, R41K, H69K, R87RI, L89M, I93L	C
	IL102	IL102a	AY529537	NFV	14			I13X, I15V, M36I, L38LF, R41K, H69K, L89M, I93L	C
		IL102b	AY529538	NFV	123			I15V, M36I, R41K, H69K, L89M, I93L	C
	IL160	IL160	AY529612	SQV, NFV	128	D30N	N88D	T12S, I15V, L19I, K20I, M36I, P39PS, R41K, K45R, L63T, H69K, A71IV, I93L	C
	IL178	IL178	AY529547	NFV	65	N88S		L19KT, K20T, T31TK, E35D, M36I, R41K, K45KR, L63P, H69K, L89M, I93L	C
	IL183	IL183a	AY529550	NFV	25			T12S, I15V, L19T, M36I, R41K, H69K, T74A, L89M, I93L	C
		IL183b	AY529549	NFV	30			T12S, I15V, L19T, M36I, R41K, H69K, T74A, L89M, I93L	C
		IL183c	AY529548	NFV	42			T12S, I15V, L19T, M36I, R41K, H69K, T74A, L89M, I93L	C
		IL183d	AY529551	NFV	48			T12S, I15V, L19T, M36I, R41K, Q61QH, H69K, T74A, L89M, I93L	C
		IL183f	AY529553	NFV	78		V11I	Q7R, T12S, I15V, L19T, M36I, R41K, L63LP, H69K, T74A, L89M, I93L	C
	IL184	IL184a	AY529554	NFV	39			T12S, I15V, L19T, M36I, L38LM, R41K, H69K, T74A, L89M, I93L	C
		IL184b	AY529555	NFV	56			T12S, I15V, L19T, M36I, R41K, H69K, T74A, L89M, I93L	C
	IL185	IL185a	AY529556	NFV	21			T12S, L19I, M36I, R41K, H69K, L89M, I93L	C
		IL185b	AY529557	NFV	42			T12S, I15V, L19I, M36I, R41K, H69K, L89M, I93L	C
		IL185c	AY529558	NFV	132	D30N		T12S, I15V, L19I, E35D, M36I, R41K, K45R, H69K, I85V, L89I, I93L, N98NI	C
	IL197	IL197a	AY529559	NFV	34			T12S, I15V, L19I, K20R, E35D, M36I, R41K, H69K, L89M, I93L	C
	IL203	IL203a	AY529567	NFV	9			T12S, I15V, L19T, M36I, R41K, H69K, L89M, I93L	C
		IL203b	AY529568	NFV	42			T12S, I15V, L19T, M36I, R41K, H69K, L89M, I93L	C
	IL210	IL210a	AY529570	NFV	2			T12S, K14KE, I15V, L19LI, M36I, R41K, L63P, H69K, I93L	C
		IL210b	AY529571	NFV	55			T12S, I15V, G17X, L19LI, M36I, R41K, L63P, H69K, I93L	C
	IL211	IL211	AY529573	IDV	2			K14R, E34E*, E35ED, M36I, R41K, H69K, L89M, I93L	C
	IL215	IL215b	AY529575	IDV	106			T12S, L19T, M36I, R41K, H69K, L89M, I93L	C
	IL217	IL217	AY529576	NFV	104	D30N	N88D	L10I, I13V, K14R, I15V, K20R, E35D, M36I, R41K, L63Q, I64IV, H69Q, L89IM, I93L	C
	IL244	IL244	AY529577	NFV	41			M36I, R41K, H69K, L89M, I93L	C
	IL248	IL248	AY529578	NFV	85			I15V, L19I, M36I, R41K, H69K, L89M, I93L	C
	IL255	IL255	AY529613	SQV, NFV	125	D30DN	N88ND	T12S, I15V, L19IT, E35ED, M36I, R41RK, P44PL, R57RK, L63P, H69K, T74TS, L89M, I93L, F99FI	C
	IL262	IL262	AY529579	IDV	55			W6WR, R8Q, I15V, L19T, M36I, R41K, Q61QH, H69K, L89M, I93L	C
	IL266	IL266	AY529621	SQV, RTV, IDV, NFV	180	I54IL, I84V, L90M	T74TP	R8RG, L10I, I15V, K20KI, E35EG, M36I, R41RK, L63P, H69K, A71V, L89M, Q92QR, I93L	C
	IL267	IL267	AY529619	IDV, RTV, SQV, NFV	229	L90M		I13IV, K14R, I15V, G16GE, K20T, E35D, M36I, R41K, H69K, A71AV, T74S, L89I, I93L	C
	IL280	IL280a	AY529617	SQV, IDV	180	I84V, L90M		T12S, I15V, K20KR, M36I, R41RK, L63P, H69K, A71V, T74S, L89M, I93L	C
		IL280b	AY529616	SQV, IDV	201	M46MI, I84V, L90M		T12S, I15V, Q18L, D29DG, M36I, R41RK, L63P, H69KR, A71V, T74S, R87RT, L89M, I93L	C
	IL282	IL282	AY529581	NFV	18			T12S, I13IM, I15V, L19T, E35ED, M36I, L38LM, R41K, L63P, H69K, L89M, I93L	C
	IL287	IL287	AY529620	SQV, RTV, IDV, NFV	184	I84V, L90M		L5LI, L10I, T12S, I15V, L19I, E35D, M36I, R41K, L63T, H69K, A71V, T74S, I93L	C
	IL293	IL293	AY529582	NFV	7			L10P, K14R, I15V, M36I, N37D, R41RK, H69K, L89M, I93L	C
	IL297	IL297	AY529583	NFV	58		N88ND	T12S, I15V, L19I, M36I, R41K, H69K, T74A, L89M, I93L	C
	IL310	IL310b	AY529587	NFV	136			Q7P, L19I, M36I, R41K, H69K, L89M, I93L	C
	IL316	IL316	AY529588	NFV	68	V82VA, I84IV, L90LM	Q58QE	I13IV, I15IV, G17GD, Q18KR, K20KR, E35ED, M36I, N37ND, R41RK, L63PR, H69HQ, L89LM, I93L	C
	IL352	IL352	AY529590	NFV	33			T12S, I15V, L19I, M36I, R41K, H69K, L89M, I93L	C
	IL369	IL369	AY529591	NFV	111	M46I, L90M		T12S, I13V, L19I, R41K, K45Q, L63A, H69K, T74K, V77I, I85IV, L89M, I93L	C
	IL370	IL370	AY529592	NFV	55	D30DN, N88NDGS	L10F	T12S, L19V, K20KM, M36I, R41K, L63LP, H69K, T74S, L89IM, I93L	C
	IL384	IL384a	AY529618	IDV, SQV, RTV, NFV	154	M46I, I54V, V82A, L90M	T74P	W6WL, L10V, I15V, K20KI, M36I, N37D, R41K, L63P, H69K, A71V, L89M, I93L	C
		IL384b	AY529622	IDV, SQV, RTV, NFV	239	M46I, I54V, V82A, L90M	T74P	L10V, I15V, M36I, N37D, R41K, K55R, I62V, L63P, H69K, A71V, L89M, I93L	C
	IL390	IL390	AY529593	NFV	34			I15V, L19I, M36I, R41K, L63PS, H69K, L89M, I93L	C
	IL398	IL398	AY529594	IDV	93			I15V, M36I, R41K, H69K, L89M, I93L	C
	IL400	IL400	AY529595	NFV	2			T12S, K14R, I15V, M36I, R41K, D60E, L63P, H69K, L89M, I93L	C
	IL401	IL401	AY529596	NFV	209	L90LM		L10R, V11F, K14R, D29DV, E35D, M36V, N37ND, R41K, L63P, I64IV, H69K, I72IV, L89LM, I93L	C
	IL428	IL428a	AY529598	NFV	50			T12S, I15V, L19V, M36I, R41K, H69K, T74S, L89M, I93L	C
		IL428b	AY529599	NFV, LPV	61			T12S, I15V, L19V, M36I, R41RK, H69K, T74S, L89M, I93L	C
	IL433	IL433a	AY529600	IDV	117	M46ML, V82A, L90LM	Q58E	L10C, I15V, K20R, M36I, K45KR, L63T, H69K, L89M, I93L	C
		IL433b	AY529601	IDV	174	M46L, V82A, L90LM	L10F, Q58QE	I15V, K20R, M36I, L63PT, H69K, L89M, I93L	C
	IL477	IL477	AY529602	NFV	208	D30N	L10F, N88D	T12S, I15V, L19V, K20T, E35D, M36I, N37D, R41K, L63V, I64M, H69K, L89M, I93L	C
	IL574	IL574	AY529605	NFV	56	D30N		Q7H, R8A, I15V, L19I, K20T, M36I, N37S, R41K, L63S, H69K, I93L	C
	IL642	IL642	AY529606	NFV	229		I47IM	I15V, M36I, R41K, H69K, L89M, I93L	C
	IL665	IL665	AY529607	NFV	70			L10LP, V11C, I15V, M36I, R41K, K45R, L63P, H69K, I72IL, L89M, I93L	C
	IL708	IL708	AY529608	NFV	44	I84C		I15V, K20R, M36I, R41K, L63T, H69K, I72T, I93L	C
	IL719	IL719	AY529609	NFV	149			T12S, I15V, L19I, M36I, L38LM, R41K, L63P, H69K, I93L	C
	IL720	IL720	AY529610	IDV	341			Q7R, I15V, L19I, M36I, R41K, H69K, L89M, I93L	C
Montes (2004)	MB_patNIB	01_NIB710	AJ577964	NFV	94			T12S, I13V, I15V, L19I, M36I, N37K, R41N, Q61E, L63A, I64M, H69K, L89M, I93L	C
		01_NIB719	AJ577965	NFV	94	L90M	L23I	T12S, I13V, I15V, L19I, K20T, E35D, M36I, N37R, R41N, Q61E, L63A, I64M, H69K, V82I, L89M, I93L	C
	MB_patCOU	02_COUL707	AJ577870	SQV, RTV, IDV, NFV	221	L90M	G73S	L10I, T12S, I15V, K20T, M36I, R41K, L63P, H69K, A71V, I93L	C
	MB_patMAU	01_MAU717	AJ577947	SQV	90			T12S, I15V, L19I, M36T, R41K, L63P, H69K, I72V, I93L	C
Snoeck (2004)	BE13b	BE13b	AY900730	IDV	44	M46I	L24I	T12S, I15V, L19I, M36I, N37K, R41N, K45R, L63P, H69K, L89T, I93L	C
	BE42	BE42	AY900745	NFV	31			I15V, E35D, M36I, N37NS, R41K, H69K, T74S, L89M, I93L	C
	BE59	BE59	AY900757	SQV, IDV, RTV, NFV	217	G48V, I54A, V82A	L33F, K43KT	L10I, I13V, I15V, L19I, M36L, N37EQ, L38M, I62V, L63V, H69K, I72V, T74S, L89LI, I93L	C
Non-B Workgroup (2005)	UK107	UK107	AY900761	NFV	38			T12S, I15V, L19I, M36I, N37S, R41K, H69K, T74S, L89M, I93L	C
	UK162	UK162	AY900762	RTV	57	M46I, V82A, L90M	K43T	T12S, I15V, L19I, K20R, D25E, M36I, R41K, K55R, Q61E, I62V, L63V, H69K, T74S, L89M, I93L	C
	UK186b	UK186b	AY900763	SQV, RTV	183	I84V, L90M	V11VI, G73GS	L10I, I15V, G16E, L19I, R41K, L63H, H69K, A71V, V77I, I93L	C
	UK231	UK231	AY900765	RTV, NFV	26	L90M	L33I, K43T	Q18L, L19T, K20X, E35N, M36I, R41K, D60E, Q61E, L63P, H69K, A71V, L89M, I93L	C
	UK243	UK243	AY900766	IDV, NFV		L90M	L23I	T12S, I15V, L19I, E35G, M36I, R41K, L63P, H69K, K70R, V82I, I93L	C
	UK258a	UK258a	AY900767	SQV, RTV				I15V, M36I, N37D, D60E, L63P, H69K, L89M, I93L	C
	UK276	UK276	AY900768	IDV, SQV, NFV	52	L90M		L10IV, T12S, I13V, I15V, L19I, K20T, M36I, Q61E, L63P, I64L, H69K, L89M, I93L, C95F	C
	UK320	UK320	AY900769	NFV	57	L90M		T12S, I15V, L19I, K20T, E35D, M36I, R41K, H69K, T74S, L89I, I93L	C
	UK356b	UK356b	AY900770	NFV, RTV	44			T12S, I15V, L19I, M36L, R41K, D60E, L63P, H69K, L89M, I93L	C
	UK445	UK445	AY900772	IDV, RTV				T12S, K14R, I15V, L19I, M36I, R41K, L63P, H69K, L89I, I93L	C
	UK449	UK449		SQV, NFV, RTV		L90M	L23I	T12S, L19I, E35D, M36I, R41K, D60E, L63S, H69K, V82I, L89M, I93L, L97X	C
	UK456b	UK456b	AY900773	NFV, IDV, RTV		M46I, L90M		L10LI, T12S, L19I, K20I, M36I, R41K, L63P, I64V, H69K, A71V, T74S, L89M, I93L	C
	UK496b	UK496b	AY900776	NFV		L90M		T12S, I13V, L19I, K20T, M36I, R41K, D60E, L63P, I64V, H69K, L89M, I93L	C
	UK512	UK512		SQV, RTV	20			T12P, I15V, L19I, M36I, N37S, R41K, L63P, H69K, L89M, I93L	C
	UK538	UK538		SQV, RTV	4			V11X, T12S, I15V, L19T, K20R, M36I, R41K, D60E, L63P, H69K, V77I, L89M, I93L	C
	UK545	UK545		SQV				T12S, I15V, L19I, K20R, M36I, R41K, K55N, D60E, H69K, L89M, I93L	C
	UK594	UK594	AY900778	SQV	184			I13V, L19I, M36I, R41K, L63V, H69K, T74S, L89M, I93L	C
	UK598	UK598	AY900779	IDV	97	L90M		T12S, I15V, G16E, L19I, M36I, R41K, K45R, L63H, H69K, L89I, I93L	C
	UK624	UK624		PI	NA	I54V		T12S, I15V, L19I, K20R, M36I, R41K, L63P, H69K, I93L	C
	UK704	UK704	AY900781	RTV, IDV				T12S, I15V, L19I, M36I, R41K, Q61E, L63V, H69K, T74A, L89M, I93L	C
	UK773a	UK773a		NFV				P9PL, T12S, I15IV, L19T, K20R, E35D, M36I, R41K, L63V, H69K, T74S, L89M, I93L	C
	UK881	UK881		SQV, RTV, Unknown	>34			T12S, I15V, L19I, M36I, R41K, L63P, H69K, L89M, I93L	C
	UK955	UK955	AY900786	SQV, RTV, IDV	137	I54V, I84V, L90M	G73S, L89V	L10I, I15V, L19I, K20X, E35D, M36I, R41K, D60E, I62IV, L63P, H69K, A71V, I85V, I93L	C
	UK973	UK973	AY900789	NFV	54			T12S, I15V, L19T, K20KT, E35D, M36I, R41K, L63T, H69K, T74S, L89M, I93L	C
	UK1121	UK1121		SQV	73			L19I, M36I, R41K, D60E, Q61E, H69K, L89M, I93L	C
	UK1125	UK1125	AY900793	RTV, IDV	15			T12S, I15V, Q18X, L19T, M36I, R41K, L63P, H69K, I93L	C
	UK1147	UK1147	AY900794	IDV, NFV	117	M46I	K43T	T12S, I15V, L19I, K20T, E35D, M36I, N37D, D60E, Q61E, L63P, H69K, A71T, L89T, I93L	C
	UK1154	UK1154	AY900795	NFV		L90M		T12S, I13V, I15V, L19I, K20T, E35D, M36I, R41K, D60E, L63P, I64V, H69K, V82I, L89M, I93L	C
	UK1428a	UK1428a	AY900800	SQV	91	M46I		I15V, L19I, M36I, N37S, R41K, H69K, T74S, L89M, I93L	C
	UK1447	UK1447	AY900803	IDV, SQV, RTV	83	G48GA, I54V, V82A, I84V, L90M	L23LI, K43KT	L10Y, I15V, M36I, R41K, I62V, L63V, H69K, A71V, T74S, L89LM, I93L	C
	UK1461	UK1461	AY900805	NFV	35		L23I	T12S, I15V, L19I, K20T, E35D, M36I, R41K, D60E, H69K, V82I, L89M, I93L	C
	UK1518	UK1518	AY900807	NFV	68	D30N	N88D	T12S, I15V, L19V, K20T, E35D, M36I, N37NS, R41K, H69K, T74S, L89M, I93L	C
	IL80	IL80	AY900811	RTV, NFV, SQV	114	I54V, V82A, I84V	K43T	W6WL, T12S, L19I, K20R, E21EG, M36I, G40E, R41K, L63P, H69K, A71V, T74A, I93L	C
	IL201	IL201d	AY900813	IDV, RTV	123	L90M		T12S, I15V, L19T, M36I, R41K, L63P, I64IL, H69K, I85V, L89M, I93L	C
	IL290	IL290	AY900816	SQV, IDV	220	V82VA, L90LM	V11VI, G73GS	T12TS, I15V, L19LI, K20X, M36I, R41K, K45KR, I62IV, L63X, H69K, A71AV, L89LM, I93L	C
	IL257	IL257	AY900818	IDV, RTV	110	V82A		L10I, I15V, L19I, D29DV, M36I, R41K, L63P, H69K, I85V, I93L	C
	IL273	IL273		NFV, IDV, RTV	137			I15V, M36I, R41K, L63T, H69K, V82I, L89M, I93L	C
	UK1461b	UK1461b		NFV	35	L90LM	L23I	T12S, I15V, L19I, K20T, E35D, M36I, R41K, D60E, H69K, V82I, L89M, I93L	C
	UK1447b	UK1447b	AY900833	IDV, NFV, SQV, RTV, APV, LPV	175	M46I, I50V, I54V, V82A, L90M	L10F, L23I, K43T	I15V, K20R, E35D, M36I, R41K, I62V, L63V, H69K, A71V, T74S, L89I, I93L	C
	UK2064	UK2064		IDV	150			I15V, L19I, E35D, M36I, R41K, L63V, H69K, T74S, L89M, I93L	C
	UK2062	UK2062		IDV, Unknown	NA			T12TS, I15V, L19IV, M36I, L63P, I64L, H69K, I93L	C
	UK2055	UK2055	AY900844	SQV	141			T12S, I15V, L19T, E35D, M36I, N37NT, R41K, H69K, L89M, I93L	C
	UK2069	UK2069	AY900845	NFV		D30N	N88D	T12S, I13V, I15V, Q18H, L19I, K20R, E35D, M36I, R41K, L63V, H69K, T74S, L89I, I93L	C
	UK2095	UK2095	AY900849	SQV, IDV, NFV, RTV, LPV	317			T12S, I15V, L19I, M36I, H69K, L89M, I93L	C
	UK1673c	UK1673c		LPV	13			T12S, I15V, L19I, M36I, R41K, H69K, L89M, I93L	C
	BR51	BR51		IDV	165			I15V, G16X, M36I, N37K, R41N, H69K, L89M, I93L	C
	BR6	BR6	AY900885	SQV, RTV, IDV	306	I54V, I84V, L90M	L89V	L10V, I13V, I15V, G16A, K20M, E35D, M36I, N37K, R41N, D60E, L63P, H69K, A71V, I93L	C
	BR62	BR62		RTV, Unknown	>165			K14R, I15V, N37K, R41N, H69K, L89M, I93L	C
	BR63	BR63		Unknown, IDV, RTV	>81			I15V, M36I, N37K, R41N, H69K, L89M, I93L	C
	SA75_DR16	SA75_DR16	AY901099	NFV		D30N	L10F, V32VA, N88D	I15IL, G16E, L19I, E35D, M36IV, R41K, Y59YF, Q61E, I62IV, H69K, T74S, L89M, I93L, N98K	C
	SA78_DR20	SA78_DR20	AY901102	NFV				T12S, I15V, L19I, M36I, R41K, H69K, V77I, L89M, I93L	C
	SA84_DR29	SA84_DR29	AY901107	NFV				T12S, I15V, L19I, K20R, E35D, M36I, R41K, R57K, H69K, T74S, L89M, I93L	C
	IL184	IL184c	AY901184	NFV	62		V11VI	T12S, I13IM, I15V, Q18R, L19Q, M36I, R41K, H69K, T74A, L89M, I93L	C
	IL215	IL215a	AY529574	IDV	100			T12S, L19T, M36I, R41K, H69K, L89M, I93L	C
	TK1002	TK1002		RTV	225	M46I, I54V, V82A		L10V, T12S, K14KR, I15V, L19I, K20R, M36I, R41K, Q61H, L63V, H69K, K70KR, T74S, L89M, I93L	C
	TK1004	TK1004		NFV, RTV, IDV	131			I3IV, T12P, I15V, L19I, K20T, E21G, E35D, M36I, N37D, R41K, K45R, L63P, I64L, H69K, T74A, L89M, I93L	C
		TK1004a		NFV, RTV, IDV	183			T12P, I15V, L19I, K20T, E35D, M36I, N37D, R41K, K45R, L63P, I64L, H69K, T74S, L89M, I93L	C
		TK1004b		NFV, RTV, IDV	196			T12P, I15V, L19I, K20T, L24LF, E35D, M36I, N37D, R41K, K45R, L63P, I64L, H69K, T74S, L89M, I93L	C
		TK1004c		NFV, RTV, IDV	268			T12P, I15V, L19IT, K20T, E35D, M36I, N37D, R41K, K45R, L63P, I64L, H69K, T74S, L89M, I93L	C
	TK1020	TK1020		SQV, RTV, IDV	211	I54V, V82C, L90M	F53L	L10I, I15V, L19I, K20R, E35D, M36I, N37D, R41K, K55H, L63P, H69K, T74A, L89M, I93L	C
		TK1020a		SQV, RTV, IDV, LPV	229	M46L, I54V, V82C, L90M	L23I, F53L	L10I, I15V, L19I, K20R, E35D, M36I, N37D, K55H, L63P, H69K, T74A, L89M, I93L	C
		TK1020b		SQV, RTV, IDV, LPV	392	M46I, I47V, I54V, V82C, L90M	L23I, K43T, F53L	L10I, I15V, L19I, K20R, E35D, M36I, N37D, R41RK, K55H, I62V, L63P, H69K, T74E, L89M, I93L	C
	TK1021	TK1021		IDV, RTV, LPV	331	M46I, I54V, V82A	L10F, L24I, Q58E	T12S, L19I, E35D, M36I, N37D, R41K, K55R, D60E, Q61E, I62V, L63P, H69K, L89M, I93L	C
		TK1021a		IDV, RTV, LPV	332	M46MI, I54IV, V82VA	L10LF, L24LI, Q58QE	T12S, I15IV, L19IV, E35D, M36I, N37D, R41K, K55KR, D60E, Q61E, I62IV, L63P, H69K, L89M, I93L	C
	TK1022	TK1022		RTV, NFV	196		L10LF	T12S, I15V, L19LI, M36IL, R41K, H69K, L89M, I93L	C
		TK1022a		RTV, NFV	294			T12S, I15V, L19I, M36I, R41K, H69K, L89M, I93L	C
	TK2006	TK2006		IDV, SQV, RTV	34			I15V, L19I, M36I, R41K, L63AV, H69K, L89M, I93L	C
		TK2006a		IDV, SQV, RTV	34			I15V, L19I, M36I, R41K, L63P, H69K, I93L	C
	TK2010	TK2010		RTV, IDV	5			T12S, I15V, L19I, M36I, R41K, Q61E, H69K, L89M, I93L	C
		TK2010a		RTV, IDV, SQV	20			T12S, I15V, L19I, M36I, R41K, Q61QE, H69K, L89M, I93L	C
		TK2010b		RTV, IDV, SQV, LPV	36			T12S, I15V, L19V, M36I, R41K, Q61QE, H69K, L89M, I93L	C
		TK2010c		RTV, IDV, SQV, LPV	56			T12TS, I15V, L19IV, M36I, R41K, Q61QE, H69K, A71AP, L89M, I93L	C
	TK2015	TK2015		RTV, NFV	285			L10LV, I15V, L19I, M36I, R41K, H69K, I93L	C
	TK2018	TK2018		IDV, RTV, NFV	218	M46MI, L90M		T12S, I13V, I15V, L19I, K20T, M36I, N37S, R41K, H69K, L89I, I93L	C
	TK2020	TK2020		SQV, RTV	250			T12S, I15V, L19V, M36V, R41K, L63P, I64L, H69K, L89M, I93L	C
	TK2023	TK2023		RTV, IDV, SQV	173			L10I, I15V, L19I, M36I, R41K, L63V, H69K, T74S, V75I, L89M, I93L	C
	TK3007	TK3007a		RTV, IDV	43			T12S, I15V, L19I, M36I, R41K, L63P, H69K, L89M, I93L	C
		TK3007b		RTV, IDV	58			T12S, I15V, L19M, E34A, M36I, R41K, L63P, H69K, L89M, I93L	C
		TK3007c		RTV, IDV	58		N83ND, L89MV	T12S, I15V, L19IM, E34A, M36I, R41K, L63P, H69K, I93L	C
	TK3009	TK3009		SQV, NFV	158	L90M		K20R, E35D, M36I, N37D, R41K, L63P, H69K, T74S, L89M, I93L	C
		TK3009a		SQV, NFV, LPV	232	L90M		I13V, K20R, E35D, M36I, N37D, R41K, L63P, H69K, T74S, L89M, I93L	C
		TK3009b		SQV, NFV, LPV	232	L90M		I13IV, K20R, E35D, M36I, N37D, R41K, L63P, H69K, T74S, L89M, I93L	C
	TK3010	TK3010		SQV, NFV, RTV, IDV, LPV	177			T12S, I15V, L19I, K20T, M36I, R41K, L63P, H69K, L89M, I93L	C
		TK3010a		SQV, NFV, RTV, IDV, LPV	210			T12S, I15V, L19I, K20T, E35ED, M36I, R41K, L63P, H69K, L89M, I93L	C
	TK3013	TK3013		SQV, NFV	205	L90M	G73S	L10V, R41K, L63P, A71I, V77I, L89M, I93L	C
	TK3015	TK3015		SQV, IDV	204	I54V, V82A, L90M	K43T	L10I, T12S, I15V, L19I, K20I, E35D, M36I, R41K, D60E, Q61E, L63P, H69K, A71V, I85V, I93L	C
		TK3015a		SQV, IDV, LPV	264	I54V, V82A, L90M	L10F, K43T	T12S, I15V, L19K, K20I, E35D, M36I, R41K, D60E, Q61E, L63P, H69K, A71V, I85V, I93L	C
		TK3015b		SQV, IDV, LPV	283	I54V, V82A, L90M	L10F, K43T	T12P, I15V, L19K, K20I, E35D, M36I, R41K, D60E, Q61E, L63P, H69K, A71V, I85V, I93L	C
		TK3015c		SQV, IDV, LPV, RTV, TPV	375	I54V, V82T, I84IV, L90M	K43T	L10I, T12S, I15V, L19I, K20IR, E35D, M36I, R41K, D60E, Q61E, L63P, H69K, A71V, I85V, L89LM, I93L	C
	TK3016	TK3016		SQV, NFV	167	I54V, L90M	T74P	L10V, I15V, E35D, M36I, R41K, H69K, A71V, L89M, I93L	C
	TK3019	TK3019		SQV, NFV, RTV	143	I54V, I84IV, L90M	V11VI, G73S	L10I, I13V, I15V, L19I, K20R, E35D, M36I, R41K, K45R, I62V, L63P, H69T, A71V, I72L, I93L	C
		TK3019a		SQV, NFV, RTV	149	L90M	G73S, T74AP	I15V, L19I, E35D, M36I, R41K, I62V, L63P, H69T, A71V, I72L, I93L	C
	TK3020	TK3020		RTV, NFV, SQV	120			T12S, I15V, L19I, E35D, M36I, R41K, L63AT, H69K, T74S, L89I, I93L	C
		TK3020a		RTV, NFV, SQV	120			T12S, I15V, L19I, E35D, M36I, R41K, L63T, H69K, T74S, L89I, I93L	C
	TK3024	TK3024		SQV, NFV	205	L90M		T12S, I15V, L19I, K20T, E35D, M36I, R41K, K45R, L63P, H69K, A71I, T74S, I93L	C
		TK3024a		SQV, NFV, LPV	246	L90M		T12S, I15V, L19I, K20T, E35D, M36I, R41K, K45KR, L63P, H69K, A71I, T74S, I93L	C
	TK3025	TK3025		SQV, RTV, NFV	165			T12S, I15V, G16E, L19I, M36I, R41K, H69K, L89M, I93L	C
	TK3026	TK3026		RTV, SQV, NFV	292	L90M		I15V, L19I, K20T, E35D, M36I, R41RK, L63P, H69K, A71I, T74S, L89I, I93L	C
	TK3027	TK3027		RTV, SQV, NFV	190	D30N, L90M	N88D	T12S, I13V, I15V, L19I, K20R, E35D, M36I, N37D, I62IV, L63P, H69K, T74S, L89I, I93L	C
		TK3027a		RTV, SQV, NFV, LPV	259			T12S, I15V, L19I, K20R, E35D, M36I, R41K, H69K, L89M, I93L	C
		TK3027b		RTV, SQV, NFV, LPV	276	D30DN, L90LM	N88D	T12S, I13IV, I15V, L19I, K20R, E35D, M36I, N37ND, R41RK, L63P, H69K, T74S, L89IM, I93L	C
	TK3031	TK3031		SQV, NFV	203	D30N	N88D	I15V, L19I, K20T, E35G, M36I, R41K, G51GR, L63S, H69K, T74A, L89M, I93L	C
	TK3032	TK3032		SQV, IDV	239	M46I, I54V, V82T, L90M		L10R, T12S, I15V, L19I, K20R, E35D, M36I, R41K, I62V, L63P, G68GE, H69K, L89M, I93L, C95F	C
	TK3035	TK3035		IDV, NFV, RTV	202	I54A, V82A		L10I, T12S, I15V, L19I, K20R, E35D, M36I, R41K, K45KR, D60E, L63P, H69K, A71V, L89M, I93L	C
	TK4001	TK4001		NFV	2			T12S, I15V, L19T, M36I, R41K, Q61E, L63P, H69K, V82I, L89M, I93L	C
	TK4004	TK4004		IDV, SQV, RTV, NFV, LPV	278	M46I, L90M		L10R, I15V, L19I, K20M, M36I, R41K, L63P, H69K, K70R, L89M, I93L	C
	TK4011	TK4011		SQV, RTV, NFV, IDV	261	V82A, L90M	Q58E, G73S	L10V, T12S, I15V, L19I, K20R, M36I, L63P, H69K, A71V, I72L, I93L	C
	TK4017	TK4017		RTV, IDV	7			T12S, I15V, L19T, M36I, R41K, L63P, H69K, I93L	C
	TK5007	TK5007		IDV, RTV	261		G73ST	L10I, T12S, I15V, L19I, E35D, M36I, N37S, R41K, K45R, I62V, L63P, H69K, I85V, I93L	C
	K5009	TK5009		RTV, IDV	96	M46I, L76V, V82A	L10LF	T12S, I15V, L19I, K20KR, M36I, R41K, I62V, L63P, H69K, L89M, I93L	C
	PL27956	60622		NFV, RTV, IDV	184	L90MR		L10V, T12S, I15V, L19I, K20R, E35D, M36I, R41K, I62IV, L63P, H69K, A71AV, T74S, V77VI, I93L	C
	PL34057	96049		NFV	82	L90M		I13V, I15V, L19T, K20T, E35G, M36I, P39PA, R41K, Q61QH, L63V, I64IV, H69K, A71V, T74S, L89I, I93L	C
	PL36705	60970		IDV	98	V82A, L90LM	T74P	L10I, T12TS, I15V, L19I, K20KR, M36I, N37NS, R41K, K45R, Q61N, L63S, H69K, I72V, L89M, I93L	C
	PL42056	72786		IDV, RTV	275	V82A	L10F, L24I, I54C	T12TS, I13IV, G17D, L19I, K20R, M36I, R41K, K45R, L63P, H69K, A71V, L89I, I93L	C
		91776		IDV, RTV, LPV	340	V82A	L10F, L24I, I54C	G17D, L19I, K20R, M36I, R41K, K45R, L63P, H69K, A71V, L89I, I93L	C
	PL47066	85002		IDV, NFV	104	D30N	N88D	T12S, I13V, I15V, L19I, E35ED, M36I, R41K, L63P, H69K, T74A, L89M, I93L	C
	PL4725	58294		Unknown, LPV	>4	G48V, I54V, V82T, L90M	Q58E	L10I, I15V, L19I, K20R, E35D, M36I, N37D, R41K, I62V, L63P, H69K, A71T, T74S, I85V, L89I, I93L	C
		69936		Unknown, LPV	>51	G48V, I54V, V82S, L90M	Q58E	L10V, I15V, L19I, K20R, E35D, M36I, N37D, R41K, K55R, I62V, L63P, H69K, A71T, T74S, I85V, L89I, I93L, C95CF	C
		80404		Unknown, LPV	>90	G48V, I54V, V82S, L90M	Q58E	L10V, I15V, L19I, K20R, E35D, M36I, N37D, R41RK, K55R, I62V, L63P, H69K, A71T, T74S, I85V, L89I, I93L, C95F	C
		100703		Unknown, LPV, APV	>159	M46ML, G48V, I54V, V82S, L90M	V11VI, L33F, Q58E	L10V, I13V, I15V, L19I, K20R, E35D, M36I, N37D, R41RK, K55R, I62V, L63P, H69K, K70KR, A71T, I72IM, T74S, I85V, L89I, I93L, C95F, T96S	C
	PL52496	99430		IDV	191			T12S, I15V, L19I, E35D, M36I, R41K, D60E, L63H, H69K, L89M, I93L	C
	PL8338	77353		IDV, RTV	304	I54V, V82A		L10I, I13IV, I15V, L19I, M36L, R41K, I62V, L63P, I64V, H69K, L89M, I93L, C95F	C
Rhee (2005)	CA7907	CA24813	AY797580	IDV, NFV	260	D30N	L10F, N88D	T12P, K14R, I15V, G16E, K20IT, E35G, M36V, R41K, L63T, H69Q, T74S, V77VI, I85IV, L89M, I93L	C
Weber (2005)	F68541	F68541	AY677417	NFV	198	M46MI, L90M		T12S, I13V, I15V, L19I, K20T, E35X, M36I, R41K, H69K, T74AS, L89I, I93L	C
	F77878	F77878	AY677381	Unknown, NFV	>133	L90M		G17D, K20R, E35D, M36I, L63Q, I64V, H69K, L89M, I93L	C
	M85073	M85073	AY677425	Unknown, NFV	>89			T12S, I15V, L19I, M36I, R41K, Q61E, H69K, T74S, L89M, I93L	C
	M72003	M72003	AY677426	NFV, RTV, IDV	212	I54IV, L90M	L10F	I13V, K14N, I15V, L19I, K20T, E35N, M36I, R41K, K45R, I62IV, L63P, I64V, H69K, K70R, T74S, L89M, I93L	C
	F64950	F64950	AY677427	NFV	15			T12S, I15V, L19I, M36I, R41K, D60E, L63LP, H69K, L89IM, I93L	C
	M81598	M81598	AY677386	RTV, IDV	51			K14KR, I15V, M36I, N37K, R41N, G52GV, H69K, L89M, I93L	C
	00M3878	00M3878	AY677436	NFV	74			I15V, L19IV, M36I, R41K, K43R, D60DE, Q61QE, L63P, H69K, L89M, I93L	C
	F61874	F61874	AY677441	IDV	90			G17S, L19I, M36I, N37D, R41K, D60E, H69K, L89M, I93L	C
	M60223	M60223	AY677445	RTV	26			I15V, L19Q, M36I, R41K, Q61QH, L63LI, H69K, L89M, I93L	C
	F16446	F16446	AY677447	SQV, NFV, APV, LPV	208	M46I, I54V, I84V, L90M		L10I, T12S, L19I, K20M, M36I, R41K, D60E, L63P, H69K, L89M, I93L	C
	F65692	F65692	AY677448	NFV	176			I15IV, G16GE, L19T, M36I, R41K, H69K, L89M, I93L	C
	F26249	F26249	AY677450	NFV	103		L89MV	T12S, L19I, K20KR, M36I, R41K, L63A, H69K, I93L	C
	F56949	F56949	AY677453	NFV	154	D30N		T12S, I13V, I15V, L19I, K20T, M36I, R41K, K45T, L63P, H69K, I93L	C
	M50395	M50395	AY677456	NFV	78			T12S, I15V, L19I, M36I, R41K, H69K, L89M, I93L	C
	F92963	F92963-2	AY714404	NFV, Unknown	>47			I15V, L19I, M36I, R41K, L63V, H69K, L89IM, I93L	C
	M62159	M62159	AY677460	IDV, NFV	300			T12S, I15V, L19I, M36I, R41K, H69K, L89M, I93L	C
	M69708	M69708	AY677400	NFV	81			T12S, L19I, K20R, M36I, N37D, R41K, L63A, I64V, H69K, I93L	C
	F92803	F92803	AY677402	IDV	24			I15V, M36I, R41K, H69K, T74S, L89M, I93L	C
	M83284	M83284	AY677471	SQV	82			T12S, I15V, L19I, M36L, L63V, H69K, T74S, V82I, L89M, I93L	C
	M66914	M66914	AY677473	NFV	192	M46MI, N88S		I15V, K20IM, E35ED, M36I, R41RK, L63LP, I64IV, H69K, L89M, I93L	C
	F30356	F30356	AY677479	Unknown, NFV	>201	I54V, V82A, L90M		L10I, T12S, I15V, L19T, K20R, E35D, M36I, N37H, P39PS, R41K, K45R, L63P, H69KQ, A71I, I93L	C
	M70004	M70004	AY677485	RTV, NFV	196			M36I, R41K, H69K, L89M, I93L	C
	F62043	F62043	AY677411	NFV	85			T12S, I15V, L19I, K20R, E35D, M36I, R41K, H69K, L89M, I93L	C
	939949	939949	AY714411	LPV	22			T12S, I15V, L19M, E35D, M36I, H69K, L89M, I93L	C
	F36402	F36402	AY714443	IDV, SQV, Unknown	>65	M46I, I84V, L90M	L10F, T74P	I15V, L19I, K20IMT, M36I, R41K, K43R, Q61H, I62V, L63T, I64V, H69K, L89M, I93L	C
	M86744	M86744	AY714447	IDV, RTV	13			T12PS, I13V, I15V, L19T, K20R, M36I, N37D, R41K, D60E, Q61E, H69K, I72IR, T74A, L89M, I93L	C
	M36208	M36208	AY714457	NFV, Unknown	>69			I15V, L19I, M36L, R41K, L63S, H69K, L89M, I93L	C
Baxter (2006)	12-1007	1007-30519	DQ875953	PI	NA	M46L, I54IV, V82A, L90M	L33F, K43KT	L10I, I15V, L19T, K20R, E35D, M36I, R41K, Q61E, I62IV, L63P, H69K, T74S, L89M, I93L	C
	12-3049	3049-30508	DQ876115	PI	NA	M46I, I54V, L76V, V82A, L90M	L10FI	W6W*, I15V, L19T, K20I, E35DN, M36I, R41K, Q61H, L63P, H69K, A71V, T74S, I85V, L89I, T91S, I93L	C
	12-1716	1716-30421	DQ876854	PI	NA	M46L, I54V, V82A, I84V	L24I, L33F, K43T	L10I, I15V, K20R, E35D, M36I, N37ND, R41K, I62V, L63T, H69K, T74S, L89M, I93L	C
	12-3082	3082-30430	DQ877155	PI	NA	M46I, I84V, L90M	G73S	L10I, T12S, I13N, I15V, L19I, M36I, R41RK, Q61H, L63P, H69K, A71V, I72L, I93L	C
	12-3102	3102-30610	DQ877250	PI	NA	L90M	L23I, L33F, F53L, Q58E	L10I, T12P, I15V, G16E, L19V, K20R, E35D, M36I, N37T, I62V, L63T, H69K, T74A, V82I, I85V, L89M, I93L	C
	48-1229	1229-30428	DQ877762	PI	NA	M46I, I54A, V82F, L90M		L10I, T12S, I13V, Q18R, L19I, K20I, E34EQ, E35E_PSDGNS, M36L, I62V, L63P, H69K, T74A, V77I, L89M, I93L	C
	48-1407	1407-30410	DQ877803	PI	NA	I54V, V82A, L90M	L10FI, K43T	T12PS, I15V, L19IK, K20I, E35D, M36I, R41K, D60E, Q61E, I62IV, L63P, H69K, A71V, I85V, I93L	C
	48-1437	1437-30320	DQ877826	PI	NA			T12S, I15V, L19I, M36I, N37S, R41K, H69K, L89M, I93L	C
	48-2254	2254-30930	DQ877888	PI	NA	G48V, I54V, V82S, L90M	L33F, Q58E	L10V, I13IV, I15V, L19I, K20R, E35D, M36I, N37D, R41K, K55R, R57RK, I62V, L63P, H69K, A71T, T74S, I85V, L89I, I93L, C95F, T96TS	C
	48-2405	2405-30826	DQ877890	PI	NA	M46I, V82A	L10F, K43T, T74P	T12S, I15V, L19T, K20R, M36I, Q61E, I62V, L63P, H69K, L89M, I93L	C
	48-3058	3058-30401	DQ877970	PI	NA	I54L, V82A, L90M	L33F, K43KT	L10I, L19I, K20R, E35D, M36I, N37D, R41K, I62V, L63P, H69K, T74S, L89M, I93L	C
	48-4006	4006-30326	DQ878240	PI	NA			L10LV, T12S, I15IV, L19I, E35D, M36I, R41K, K45KR, D60E, H69K, L89M, I93L	C
	48-4134	4134-30317	DQ878365	PI	NA	G48V, I54V, V82A, I84V	L33F, K43T	L10I, I15V, G16E, L19I, K20V, E35DN, M36I, L63C, H69K, T74S, I85V, L89M, I93L	C
	48-5096	5096-30901	DQ878592	PI	NA	M46I, I54V, V82A, L90M	K43KT, T74P	L10V, I13A, K20IM, E21K, A22V, M36I, R41RK, K55R, Q61N, L63P, I64V, H69K, L89M, I93L	C
	48-7101	7101-30723	DQ878954	PI	NA	M46I, I54V, V82A	L10F, L24I	T12P, I13V, L19I, K20I, E35D, M36I, R41K, L63P, H69K, T74AS, L89M, I93L	C
	48-9201	9201-30911	DQ877578	PI	NA			K20R, M36I, N37K, R41N, H69K, L89M, I93L	C
	48-9302	9302-30918	DQ877587	PI	NA	I54V, V82A, L90M	L10F, G73GS, L89IMV	I15V, K20I, E35D, M36I, N37K, R41N, Q61H, L63P, H69K, A71V, I85V, I93L	C
	48-8032	8032-30707	DQ879070	PI	NA	L90LM		T12S, I15V, L19I, M36I, R41K, L63P, H69K, K70KR, V82I, I93L	C
	48-8056	8056-30930	DQ879080	PI	NA	V32I, I47A	L33F, Q58E	L10I, T12S, I15V, L19I, K20T, M36I, D60E, L63P, H69K, T74A, V82I, I85V, L89M, I93L	C
Doualla-Bell (2006)	Pt1	FDB_Pt1		NFV		D30N		T12S, I15V, G16A, L19I, K20T, E35D, M36I, R41K, K45Q, D60E, C67E, H69K, L89IM, I93L	C
	Pt10	FDB_Pt10		NFV		D30N, L90M	L33F	I15V, G17D, L19V, E35D, M36I, N37K, R41K, L63P, H69K, A71V, I93L	C
	Pt11	FDB_Pt11		NFV		M46I, L90M		T12S, I15V, L19I, M36I, R41K, L63V, H69K, V77I, L89M, I93L	C
	Pt12	FDB_Pt12		NFV		N88S		T12S, I15V, L19I, M36I, R41K, L63P, I64L, H69K, I93L	C
	Pt13	FDB_Pt13		NFV		D30N, M46I	L10F, N88D	I15V, M36I, R41K, L63P, H69K, I93L	C
	Pt2	FDB_Pt2		NFV		L90M		T12S, I13V, I15V, L19V, K20T, E35G, M36I, R41K, H69K, K70R, A71V, T74S, V82I, L89I, I93L	C
	Pt3	FDB_Pt3		NFV		D30N		T12S, I15V, L19V, K20T, E35D, M36I, R41K, K45Q, D60E, Q61E, L63P, H69K, V75I, I93L	C
	Pt4	FDB_Pt4		NFV		L90M		K14R, I15V, L19I, K20T, E35D, M36I, R41K, D60E, Q61E, I64V, H69K, L89M, I93L	C
	Pt5	FDB_Pt5		NFV		N88S	L10F	I15V, L19I, K20T, E35D, M36I, R41K, Q61H, L63T, H69K, T74S, L89M, I93L	C
	Pt6	FDB_Pt6		NFV		M46I, N88S	L10F	T12S, I15V, L19V, K20I, M36I, R41K, L63V, I64V, H69K, T74V, L89M, I93L	C
	Pt7	FDB_Pt7		NFV		D30N	L33F	L10M, V11F, I13V, I15V, K20R, E35D, M36I, R41K, I62V, L63T, H69K, I93L	C
	Pt9	FDB_Pt9		NFV		D30N	L33F, N88D	T12S, I15V, L19I, M36I, R41K, I62V, L63P, H69K, T74A, L89IM, I93L	C
Sanabani (2006)	04BR013	04BR013	AY727522	PI	NA	M46I, G48V, V82A	L24I	L10I, K20R, M36I, N37E, R41K, K55R, I62V, L63P, H69K, T74A, L89M, I93L	C
	04BR021	04BR021	AY727523	PI	NA			I15V, M36I, N37K, R41N, H69K, L89M, I93L	C
	04BR038	04BR038	AY727524	PI	NA			I15V, M36I, N37K, R41N, H69K, L89M, I93L	C
	04BR073	04BR073	AY727525	PI	NA			T12S, I13V, I15V, L19I, M36I, N37K, R41N, L63P, I64M, H69K, L89M, I93L	C
	04BR137	04BR137	AY727526	PI	NA			I15V, N37K, R41N, H69K, L89I, I93L	C
	04BR142	04BR142	AY727527	PI	NA			I15V, M36I, N37K, R41N, H69K, L89M, I93L	C
Santos (2006)	036	036PR_RT	AY275733	Unknown, SQV, RTV, LPV	>47			I15V, M36I, N37K, R41N, H69K, L89M, I93L	C
	042	042PR_RT	AY275737	NFV	56			T12S, I15V, M36I, N37K, R41N, H69K, L89M, I93L	C
McGrath (2007)	1	DMG_1a		RTV, ATV	48		N83ND	T12S, I15V, L19I, M36I, R41K, L63PS, H69K, I93L	C
	2	DMG_2a		RTV, ATV	48			T12S, I15V, L19I, K20R, E35D, M36I, R41K, H69K, L89M, I93L	C
	6	DMG_6a		ATV	48			T12S, I15V, L19I, M36IT, R41K, K43KR, L63P, H69K, L89LM, I93L	C
	7	DMG_7a		ATV	48			L10I, I13V, G16GE, L19T, K20R, M36I, R41K, L63AITV, I64IM, E65D, H69K, T74TA, L89M, I93L	C
Sen (2007)	T009	NPT9	EF186927	SQV, RTV				T12S, K14R, I15V, G16E, L19I, M36IV, R41K, Q61H, L63T, H69K, L89M, I93L	C
		NPT9-PL	EF186959	SQV, RTV				T12S, K14R, I15V, G16E, L19I, M36V, R41K, Q61H, L63T, H69K, L89M, I93L	C
	T093	NPT93	EF186929	RTV, IDV		M46I, I54L, L90M	L23LI, G73ST	L10Y, T12S, L19T, K20I, L24LF, R41K, K45KR, K55KR, L63P, H69K, A71V, I72IM, V77I, I93L	C
		NPT93-PL	EF186978	RTV, IDV		M46I, I54IL, L90M	G73ST	L10Y, T12S, L19T, K20I, L24F, R41K, K45R, K55R, L63P, H69K, A71V, V77I, I93L	C
	T076	NPT76	EF186928	NFV, RTV		M46L, V82A, L90M	T74P	L10V, T12A, I15V, L19I, K20R, M36I, N37D, K55N, L63P, H69K, A71V, I93L	C
		NPT76-PL	EF186980	NFV, RTV		M46L	T74P	L10I, T12S, L19I, K20R, M36I, K55N, L63P, H69K, A71V, L89M, I93L	C
	T002	NPT2	EF186926	RTV, IDV		M46I, I54V, V82VA	L24I	L10I, T12S, I15V, L19I, M36L, N37S, R41K, Q61H, L63P, H69K, L89M, I93L	C
		NPT2-PL	EF186983	RTV, IDV		M46I, I54V, V82A	L24I	L10I, T12S, I15V, L19I, M36L, N37S, R41K, Q61H, L63P, H69K, A71AV, L89M, I93L	C
von Wyl (2007)	66	1845456	EF449952	PI	NA			K14R, I15V, G16A, M36I, R41N, H69K, I93L	C
	73	5326978	EF449871	PI	NA			T12S, I15V, G16E, L19Q, M36I, R41K, L63P, H69K, V82I, I93L	C
	93	493245	EF449903	PI	NA			I15V, M36I, R41K, H69K, L89M, I93L	C
	19	702313	EF449901	PI	NA	I54IV, N88NS, L90M		L10V, T12K, I15V, G16E, L19I, K20R, E35D, M36IV, N37Q, P39Q, R41N, D60DN, Q61QH, I62V, L63T, H69K, A71AV, I72IT, T74A, L89M, I93L	C
	74	3030600	EF449877	RTV, PI	NA			T12S, I13IM, L19I, M36I, N37K, R41N, G49GR, L63P, H69K, I93L	C
	101	7278778	EF449991	RTV, PI	NA			L10V, L19I, M36I, L63S, H69K, I72V, L89M, I93L	C
	37	4822080	EF449879	PI	NA			M36I, R41K, L63T, H69KN, T74S, L89M, I93L	C
	41	662849	EF449918	PI	NA	D30N	N88D	I15V, E35D, M36I, N37K, R41HN, L63P, H69K, A71AV, I85IV, I93L	C
Marconi (2008)	SW055	sw055	EU308066	LPV	46			T12S, I15V, L19T, K20R, E35D, M36I, R41K, H69K, I72M, T74S, L89M, I93L	C
	SW066	SW066	EU308077	LPV	83			I15V, L19V, M36I, R41K, Q61E, H69K, L89M, I93L	C
	SW068	SW068	EU308079	LPV	23			I15V, L19I, M36I, R41K, L63T, H69K, T74S, L89M, I93L	C
	SW070	SW070	EU308081	LPV	49	I54V, V82A	L33LF	G16A, L19V, E35D, M36I, R41K, I62V, L63P, H69K, T74S, L89M, I93L	C
	SW083	sw083	EU308093	LPV	91	V82A		T12S, I15V, L19I, K20R, M36I, R41K, L63P, H69K, L89M, I93L	C
	SW090	SW090	EU308099	LPV				T12S, I15V, L19T, E35D, M36I, R41K, K45R, D60E, I62V, L63P, H69K, V82I, L89M, I93L	C
Pillay (2008)	DR5	DR5	AY589870	SQV				T12S, I15V, L19I, M36I, R41K, L63P, H69K, T74S, I93L	C
	DR32	DR32	AY589889	LPV				T12S, I15V, Q18E, L19I, K20R, M36I, R41K, L63P, H69K, V77I, L89M, I93L	C
	DR37	DR37	AY589894	NFV		M46I, N88S, L90M	L10F	T12S, I13V, I15V, L19I, K20T, M36I, R41K, L63P, H69K, L89I, I93L	C
	DR43	DR43	AY589898	NFV				T12S, I15V, L19V, M36I, R41K, L63LP, H69K, L76L*, L89M, I93L	C
	DR44	DR44	AY589899	RTV		M46I, I54V, V82A		L10I, I15V, L19I, K20R, M36I, N37S, H69K, L89M, I93L	C
	DR51	DR51	AY589904	IDV	78	V82T	L10F	T12S, I15V, L19T, M36L, N37S, K45R, L63P, H69K, L89M, I93L, C95F	C
	DR53	DR53	AY589906	RTV	183			T12S, I15V, L19V, M36I, R41K, Q61N, H69K, I93L	C
	DR54	DR54	AY589907	NFV, RTV				L19T, M36L, R41K, L63T, H69K, T74S, L89M, I93L, F99FL	C
	DR55	DR55	AY589908	RTV	104	M46L, I54V, V82A	L23LI	T12S, I15V, G16GE, L19I, K20R, M36I, R41K, L63V, H69K, T74S, L89M, I93L	C
	DR58	DR58	AY589910	NFV		D30N		T12S, I13V, I15V, L19I, K20R, E35D, M36I, R41K, K45Q, I64V, H69K, L89I, I93L	C
	DR60	DR60	AY589912	RTV		M46I, N88S		T12S, I15V, L19I, K20I, E35D, M36I, N37D, R41RK, D60E, L63P, H69K, A71AT, I72L, I93L	C
	DR61	DR61	AY589913	NFV, RTV		V82VL, L90LM		T12TS, I13IV, I15V, L19M, K20R, M36I, N37D, R41K, H69K, L89M, I93L	C
	DR68	DR68	AY589917	RTV	104	M46I, I54V, V82A		L10V, T12S, I15V, L19I, E35ED, M36I, R41K, D60E, Q61E, L63P, H69K, L89M, I93L	C
	DR71	DR71	AY589920	RTV	43	V32VI, V82A	M46MV	I15IV, G16E, L19I, M36I, R41K, Q61H, L63A, E65D, H69K, I72V, L89M, I93L	C
	DR14	02ZA.DR14	AY589876	IDV				T12S, I15V, L19I, M36I, R41K, L63A, H69K, I93L	C
	DR16	02ZA.DR16	AY589877	NFV		D30N	L10F, V32VA, N88D	I15IL, G16E, L19I, E35D, M36IV, R41K, Y59YF, Q61E, I62IV, H69K, T74S, L89M, I93L, N98K	C
	DR20	02ZA.DR20	AY589881	NFV				T12S, I15V, L19I, M36I, R41K, H69K, V77I, L89M, I93L	C
	DR23	02ZA.DR23	AY589882	IDV, LPV				T12S, I15V, G16A, G17D, L19I, M36I, R41K, D60E, L63P, H69K, L89M, I93L	C
	DR29	02ZA.DR29	AY589886	NFV				T12S, I15V, L19I, K20R, E35D, M36I, R41K, R57K, H69K, T74S, L89M, I93L	C
	DR42	02ZA.DR42	AY589897	IDV		V82VA		T12S, I15V, L19I, E35ED, M36I, R41K, I62IV, L63V, H69K, T74A, L89M, I93L, N98I	C
	DR81	03ZA.DR81	AY589925	NFV				T12S, I15V, L19I, M36I, R41K, L63P, H69K, L89M, I93L	C
	DR92	03ZA.DR92	AY589931	IDV, LPV		V82A, L90M		T12S, I13IV, I15V, L19IT, K20R, M36I, L38LV, R41K, D60E, Q61E, I62IV, L63P, H69K, L89M, I93L	C
	DR93	03ZA.DR93	AY589932	IDV, LPV		M46I, L90M		L10R, T12S, G17D, L19T, K20M, M36I, R41K, K55KR, L63T, H69K, I72T, L89M, I93L	C
	DR100	03ZA.DR100	AY589936	RTV		M46I, I54V, V82A		I15E, G16GE, L19E, K20R, E35D, M36I, R41K, H69K, L89I, I93L	C
Riddler (2008)	RG19024	RG19024w20		LPV	16			L5LF, T12S, I15V, L19I, M36I, R41K, L63V, H69K, T74TS, L89M, I93L	C
	RG38236	RG38236w72		LPV	72			T12S, I15V, G16E, L19I, M36I, R41K, K45R, H69K, I72V, L89M, I93L	C
	RG49532	RG49532w9		LPV	2			T12S, I15V, L19I, M36I, R41K, D60E, L63S, H69K, L89I, I93L	C
	64042	12728Ja		LPV	44			T12A, I15V, L19I, M36I, R41K, D60E, Q61E, L63P, H69K, L89M, I93L	C
	RG9485	RG9485w19		LPV	26			T12S, I15V, L19I, M36I, L63T, H69K, I93L	C
Rosen-Zvi (2008)	71	06p71-2		LPV	12			I15V, Q18E, K20R, E35D, M36I, R41K, D60E, Q61E, I62V, L63V, H69K, T74A, L89M, I93L	C
		09p71-3		LPV	175	I54V, V82A		I15V, Q18E, K20R, E35D, M36I, R41K, K45I, D60E, I62V, L63V, H69K, L89M, I93L	C
Sylla (2008)	B7173	B7173_C1	EF525661	IDV		M46I, I84V	L10F, T74P	T12S, I13V, I15V, L19V, M36I, L63V, I64V, H69K, L89M, I93L	C
		B7173_C2	EF525662	IDV		M46I, I84V	L10F, T74P	T12S, I13V, I15V, L19V, M36I, L63V, I64V, H69K, L89M, I93L	C
Cardoso (2009)	3098	BRGO3098	FJ638445	PI	NA			L10M, I15V, L19T, M36I, N37K, R41N, L63V, H69K, I93L	C
Jones (2009)	176988	176988	FJ659847	PI	NA			I15V, M36I, N37K, R41N, L63V, H69K, T74S, L89M, I93L	C
	146965	146965	FJ659848	PI	NA			I15V, G16A, N37R, R41N, H69K, L89M, I93L	C
	188418	188418	FJ659849	PI	NA			I15V, G16A, N37R, R41N, H69K, L89M, I93L	C
Kandathil (2009)	VL06_253	VL06_253	EU030406	PI	NA	D30N	N88D, L89V	L10M, T12S, I13V, I15V, L19T, K20T, E21D, E35K, M36I, P39A, R41K, K45R, Q61D, L63P, H69K, T74S, V82I, I93L	C
	VL07_040	VL07_040	EU030407	PI	NA	M46I, L90M	K43T	T12S, I15V, L19I, K20T, E35D, M36I, R41K, L63P, H69K, T74S, I93L	C
	VL06_161	VL06_161	EU037773	PI	NA			T12S, I15V, L19I, M36I, R41K, L63P, H69K, I93L	C
	VL06_192	VL06_192	EU037774	PI	NA			T12S, I15V, L19I, E35D, M36I, N37E, L63T, H69K, T74S, L76X, L89M, I93L	C
	VL07_033	VL07_033	EU037776	PI	NA			T12S, I15V, L19I, M36I, R41K, L63P, H69K, I93L	C
	VL07_048	VL07_048	EU037778	PI	NA			T12S, I15V, L19I, M36I, R41K, L63P, H69K, L89M, I93L	C
	VL07_063	VL07_063	EU037779	PI	NA			T12X, K14R, L19I, M36I, R41K, L63P, H69K, L89M, I93L	C
	VL07_109	VL07_109	EU781834	PI	NA			T12S, I15V, G16E, L19I, M36I, R41K, L63T, H69K, I93L	C
	VL07_103	VL07_103	EU781835	PI	NA	M46I, I54V, V82A	L24I	L10I, T12S, I15V, L19T, M36I, R41K, L63P, H69K, L89M, I93L	C
	VL07_097	VL07_097	EU781836	PI	NA			T12S, I15V, L19I, M36T, N37S, R41K, L63P, H69K, L89LM, I93L	C
	VL07_108	VL07_108	EU781837	PI	NA			T12S, K14R, I15V, G16E, L19I, M36V, R41K, D60E, Q61E, L63T, H69K, I93L	C
	VL07_337	VL07_337	EU781838	PI	NA			L19T, K20R, M36V, R41K, L63P, H69K, L89M, I93L	C
	VL07_329	VL07_329	EU781839	PI	NA			K14R, I15V, L19M, M36I, R41K, L63P, H69K, L89M, I93L	C
	VL07_286	VL07_286	EU781840	PI	NA			T12S, I15V, L19I, M36I, R41K, L63P, H69K, I93L	C
	VL08_104	VL08_104	EU781841	PI	NA			I15V, L19T, M36V, R41K, D60E, Q61E, L63P, H69K, L89M, I93L	C
	VL08_071	VL08_071	EU781844	PI	NA			T12S, I15V, L19I, M36I, R41K, L63P, H69K, L89LM, I93L	C
	VL08_145	VL08_145	EU781845	PI	NA			T12S, I15V, L19T, M36I, R41K, L63P, H69K, I93L	C
	VL08_097	VL08_097	EU781846	PI	NA			T12S, I15V, L19I, M36I, R41K, R57X, L63P, H69K, I93L	C
Kassaye (2009)	TCDD-05	TC05_2003	FJ445702	SQV	147	L90M		W6W*, P9PR, T12S, I15V, L19I, E35D, M36I, R41K, L63P, H69K, A71V, I93L	C
	TCDD-08	TC08_2003	FJ445719	SQV	210			I15V, L19I, M36I, R41K, D60E, L63T, H69K, I72T, T74S, L89M, I93L	C
		TC08_2004	FJ445726	SQV	239			I15V, L19I, M36I, R41K, D60E, L63T, H69K, I72T, T74S, L89M, I93L	C
	TCDD-13	TC13_2003	FJ445709	SQV, NFV	178			I15V, L19LI, M36I, R41K, L63V, H69K, V82I, I93L	C
	TCDD-19	TC19_2003	FJ445710	IDV, RTV	26			I13V, I15V, L19I, M36I, R41K, H69K, T74S, L89M, I93L	C
	TCDD-28	TC28_2003	FJ445707	SQV	361	L90M	G73S	I15V, L19I, K20I, M36I, L63P, H69K, A71V, I93L	C
		TC28_2004	FJ445727	SQV, LPV	378	M46I, I84V, L90M	G73S	I15V, L19I, K20I, M36I, L63P, H69K, A71V, I93L	C
	TCDD-30	TC30_2003	FJ445708	NFV, IDV	99	I54V, I84V		L10I, T12A, I15V, L19I, K20KR, E35D, M36I, R41K, L63P, H69Q, L89M, I93L	C
	TCDD-35	TC35_2003	FJ445701	NFV, IDV	143			T12S, I15V, L19I, K20I, M36I, R41K, D60E, Q61E, L63P, H69K, I93L	C
		TC35_2004	FJ445721	NFV, IDV	143		I54IF	T12S, I13IL, I15V, L19I, M36I, R41K, D60E, Q61E, L63P, H69K, I93L	C
	TCDD-23	TC23_2003	FJ445712	SQV	304	L90M		I15V, L19I, K20M, M36I, R41K, D60E, L63P, H69Q, V82I, L89M, I93L	C
	TCDD-31	TC31_2003	FJ445704	SQV, APV, IDV, LPV	198	M46MI, L76V	V32VG, I47IM	R41R*K, D60DE, L63P, H69K, T74A, I85V, L89M, I93L	C
	TC-68	TC68_2004	FJ445724	NFV, LPV	17	I54L, L90LM	L10LF	I15V, L19I, K20T, E35DG, M36I, N37S, R41K, I64L, H69K, V82I, I85V, L89M, I93L	C
	TC-52	TC52_2004	FJ445728	IDV	48			T12S, I15V, L19I, M36I, R41K, L63P, H69K, L89M, I93L	C
	TC12	TC12_2003	FJ445700	Unknown, IDV, APV	>26			T12S, I15V, L19I, M36I, R41K, L63LI, H69K, I72IV, L89M, I93L	C
		TC12_2004	FJ445729	Unknown, IDV, APV	>26			I15V, L19I, M36I, R41K, H69K, L89M, I93L	C
	TC53	TC53_2003	FJ445735	NFV	8			M36I, R41K, D60E, L63P, H69K, L89M, I93L	C
Rhee (2009)	CA14714	CA38172	FJ983395	NFV	48	L90M		T12S, K14R, I15V, L19I, K20T, E35D, M36I, R41K, K45R, L63PS, I64V, H69K, L89M, I93L	C
Dau (2010)	05574B	05574B	GU581672	PI	NA			T12S, I15V, L19T, M36I, R41K, L63P, H69K, I93L	C
	06552A	06552A	GU581760	PI	NA	M46I, I54V, L76V, V82A		L10I, I13V, G16GE, L19I, K20R, M36I, N37ND, R41K, Q61N, L63PS, H69K, T74S, L89M, I93L	C
	07344A	07344A	GU581841	PI	NA	L90M		T12S, I13V, I15V, L19I, K20T, M36I, N37ND, R41K, L63P, H69K, V82I, L89M, I93L	C
	07762A	07762A	GU581866	PI	NA			K14KR, I15V, K20KR, M36I, N37K, R41N, L63T, H69K, T74S, L89M, I93L	C
	09218A	09218A	GU581962	PI	NA			T12S, I15V, L19I, M36I, R41K, L63P, H69K, L89M, I93L	C
El-Khatib (2010)	Pat076	11ZA_SAVE1046	JF960526	LPV				T12S, I15V, L19IT, K20R, M36I, R41K, H69K, I72V, L89M, I93L	C
	Pat078	11ZA_SAVE1172	JF960528	LPV				L10V, I15V, L19V, K20R, M36I, R41K, H69K, L89M, I93L	C
	Pat079	11ZA_SAVE1255	JF960529	LPV				T12S, I15V, L19V, E35D, M36I, R41K, K45R, L63T, H69K, T74S, V82VI, L89M, I93L	C
	Pat080	11ZA_SAVE1256	JF960530	LPV				T12S, I15V, L19I, M36I, R41K, H69K, T74S, L89M, I93L	C
	Pat084	11ZA_SAVE1380	JF960534	LPV				T12S, I15V, G16A, L19I, M36I, N37D, R41K, H69K, L89M, I93L	C
	Pat085	11ZA_SAVE1382	JF960535	SQV, LPV				T12S, I15V, L19T, K20R, E35D, M36I, R41K, H69K, L89M, I93L	C
	Pat086	11ZA_SAVE1403	JF960536	LPV				T12S, I15V, L19I, M36L, N37S, L63LP, H69K, K70Q, L89M, I93L	C
	Pat087	11ZA_SAVE1412	JF960537	LPV				T12S, I15V, L19T, M36I, R41K, L63P, H69K, L89M, I93L	C
	Pat092	11ZA_SAVE1489	JF960542	RTV, ATV		N88NS, L90M	L23I, F53FL	T12S, I13V, I15V, L19I, K20T, E35D, M36I, R41K, I62IV, H69K, A71IV, T74S, V77VI, L89I, I93L	C
	Pat094	11ZA_SAVE2003	JF960544	LPV			T74PS	I15V, E35D, M36I, R41K, R57K, H69K, L89M, I93L	C
	Pat095	11ZA_SAVE2018	JF960545	LPV				T12S, I15V, L19I, N37K, R41N, L63P, H69K, T74A, L89M, I93L	C
	Pat097	11ZA_SAVE2028	JF960547	LPV				T12S, L19I, M36I, R41K, L63P, H69K, L89M, I93L	C
	Pat098	11ZA_SAVE2040	JF960548	LPV				T12S, I15V, L19I, E35D, M36I, R41K, R57RK, D60E, Q61E, L63P, H69K, L89M, I93L	C
	Pat099	11ZA_SAVE2062	JF960549	LPV				T12S, L19I, M36I, R41K, K43R, L63P, H69K, L89M, I93L	C
	Pat100	11ZA_SAVE2063	JF960550	LPV				T12S, I15V, L19I, M36I, R41K, D60E, Q61E, H69K, L89M, I93L	C
	Pat102	11ZA_SAVE2082	JF960552	LPV				T12S, I15V, L19T, M36I, N37S, R41K, Q61E, L63P, H69K, I93L	C
	Pat105	11ZA_SAVE2126	JF960555	LPV			Q58E	T12S, I15V, L19I, M36I, R41K, D60E, L63P, H69K, L89M, I93L	C
	Pat107	11ZA_SAVE2188	JF960557	LPV				I15V, L19I, M36I, N37S, R41K, L63LP, H69K, I93L	C
	Pat109	11ZA_SAVE2228	JF960559	LPV				T12S, I15V, L19I, K20R, E35D, M36I, R41K, I62V, H69K, T74S, L89M, I93L	C
	Pat111	11ZA_SAVE2266	JF960561	LPV				K14R, I15V, L19I, M36I, N37D, R41K, H69K, L89LM, I93L	C
	Pat113	11ZA_SAVE2319	JF960563	LPV				T12S, I15V, L19I, K20R, M36I, R41K, D60E, Q61E, L63P, H69K, V77I, L89M, I93L	C
	Pat115	11ZA_SAVE2347	JF960565	LPV				T12S, I15V, L19I, N37S, R41K, L63P, H69K, V77I, V82I, I93L	C
	Pat116	11ZA_SAVE2358	JF960566	LPV				T12S, I15V, L19I, M36I, R41K, H69K, V82VI, L89M, I93L	C
	Pat117	11ZA_SAVE2359	JF960567	LPV				T12S, L19I, E35D, M36I, R41K, L63P, H69K, L89M, I93L	C
	Pat119	11ZA_SAVE2367	JF960569	LPV				T12S, I15V, L19I, M36I, R41K, D60E, H69K, L89M, I93L	C
	Pat122	11ZA_SAVE2434	JF960572	LPV				T12S, I15V, L19T, M36I, R41K, H69K, V82I, L89M, I93L	C
	Pat124	11ZA_SAVE2438	JF960574	LPV				T12S, I15V, L19V, M36I, R41K, L63PS, H69K, V77VI, L89M, I93L	C
	Pat125	11ZA_SAVE2442	JF960575	LPV				T12S, I15V, L19IV, M36I, R41K, L63P, H69K, I93L	C
	Pat126	11ZA_SAVE2455	JF960576	LPV				T12S, I15V, L19M, K20R, M36I, R41K, L63P, H69K, V77I, L89LM, I93L	C
	Pat127	11ZA_SAVE2466	JF960577	LPV				T12S, I15V, L19I, R41K, L63Q, H69K, T74A, V77I, L89M, I93L	C
	Pat129	11ZA_SAVE2478	JF960579	LPV				T12A, I15V, L19I, K20KR, E35D, M36I, R41RK, D60E, Q61E, L63P, H69K, L89M, I93L	C
Knops (2010)	ID2137	ID2137-GT1	GU271172	IDV, LPV		V32I, I47A, V82A		L10I, T12S, I15V, L19AP, K20R, M36I, R41K, L63P, H69K, A71V, I85V, I93L	C
		ID2137-GT2	GU271173	IDV, LPV, DRV, RTV	33	V32I, I54L, L76V, V82A	L89V	L5F, L10I, T12S, I15V, L19T, K20R, M36I, R41K, L63P, H69K, A71V, I85V, I93L	C
Rodrigues (2010)	34_08	BR08SC034	GQ401298	LPV				K14R, I15V, N37K, R41N, L63P, H69K, I93L	C
	36_08	BR08SC036	GQ401299	LPV				I15V, N37K, R41N, L63P, H69K, I93L	C
	315_07	BR07SC315	GQ401300	LPV				K14R, I15V, N37K, R41N, L63P, H69K, I93L	C
	317_07	BR07SC317	GQ401301	LPV				T12S, I15V, L19T, M36I, N37K, R41N, L63P, H69K, I93L	C
	318_07	BR07SC318	GQ401302	LPV				I15V, N37K, R41I, L63P, H69K, T74A, L89M, I93L	C
	319_07	BR07SC319	GQ401303	LPV				K14R, I15V, M36I, N37K, R41N, L63LP, H69K, L89I, I93L	C
	320_07	BR07SC320	GQ401304	LPV				L10V, T12S, I15V, K20R, E35D, M36I, N37K, R41N, H69K, L89M, I93L	C
	321_07	BR07SC321	GQ401305	LPV				T12S, K14R, I15V, L19T, M36I, N37K, R41N, H69K, L89IM, I93L	C
	338_07	BR07SC338	GQ401307	NFV				I15V, M36I, N37K, R41N, I64L, H69K, V82VI, L89M, I93L	C
	342_07	BR07SC342	GQ401308	LPV				I15V, N37K, R41N, L63LP, H69K, I93L	C
	301_07	BR07SC301	GQ401314	SQV, RTV, LPV		M46L, G48V, I54V, V82S	L24I, L33F, T74P	L10V, I13V, I15V, G16E, K20M, E34Q, E35D, M36I, N37NKT, R41N, K55R, L63T, H69K, L89M, I93L	C
	305_07	BR07SC305	GQ401315	NFV		L90M	L89V	I13V, I15V, K20T, E35G, M36I, N37K, R41N, I62V, H69K, I72IV, T74S, V82I, I93L	C
	307_07	BR07SC307	GQ401316	NFV				L10IV, E35D, M36I, N37K, R41N, H69K, T74S, L89M, I93L	C
	313_07	BR07SC313	GQ401319	LPV				I15V, L19I, M36I, N37K, R41N, H69K, I93L, C95CG	C
	323_07	BR07SC323	GQ401320	LPV				T12P, I15V, L19Q, E35D, M36I, N37K, R41N, L63I, H69K, L89M, I93L	C
	326_07	BR07SC326	GQ401321	LPV				I15V, Q18L, M36L, N37K, R41N, L63P, H69K, L89M, I93L	C
	327_07	BR07SC327	GQ401322	LPV				K20R, M36I, N37K, R41N, H69K, L89M, I93L	C
	329_07	BR07SC329	GQ401324	LPV				N37K, R41N, H69K, I93L	C
	331_07	BR07SC331	GQ401326	NFV				I15V, L19Q, M36I, N37K, R41N, D60E, L63T, H69K, L89M, I93L	C
	339_07	BR07SC339	GQ401327	NFV				I15V, L19Q, M36I, N37K, R41N, D60DE, Q61QE, L63LIPT, H69K, L89M, I93L	C
	40_08	BR08SC040	GQ401333	LPV				T12S, I15V, L19I, M36I, N37K, R41N, L63V, H69K, L89M, I93L	C
	325_07	BR07SC325	GQ401336	LPV				K14KR, I15V, L19I, E35ED, M36MI, N37K, R41IN, L63LP, H69K, L89M, I93L	C
Wallis (2010)	ZAP1	ZAP1	HM601455	LPV				T12S, I15V, L19I, M36I, R41K, L63P, H69K, I93L	C
Green (2011)	707PKE12F	707PKE12F	HM623503	LPV	81			T12S, I15V, L19I, E35D, M36I, R41K, L63P, H69K, L89M, I93L	C
	707PKE19F	707PKE19F	HM623509	RTV, LPV	131	M46I, I54V, L76V, V82A	Q58E	L10I, T12S, I15V, L19T, K20R, E35D, M36I, R41K, I62V, L63P, H69K, L89M, I93L	C
	707PKE33F	707PKE33F	HM623520	LPV				T12S, I15V, L19V, E35D, M36I, R41K, L63P, H69K, I93L	C
	707PKE36F	707PKE36F	HM623523	LPV	87			T12S, I15V, L19I, M36IT, N37NS, R41K, L63LP, H69K, L89M, I93L	C
	707PKE38F	707PKE38F	HM623525	LPV	83			L10LI, T12A, I15V, G16GE, E35D, M36I, R41K, K45R, L63APT, H69K, V82VI, L89M, I93L	C
	707PKE40F	707PKE40F	HM623527	LPV	84			T12TS, I15V, L19IT, M36I, R41K, L63HP, H69K, L89LM, I93L	C
	707PKE43F	707PKE43F	HM623529	LPV	46			T12TS, K14KR, I15IV, L19IT, M36MI, N37S, R41K, H69K, V82VI, L89M, I93L	C
	707PKE49F	707PKE49F	HM623531	LPV	121			T12S, I15V, L19I, K20MR, E35D, M36I, R41K, D60E, Q61E, L63P, H69K, I93L	C
	707PKE51F	707PKE51F	HM623533	LPV	144			I15V, L19V, M36I, R41K, H69K, I93L	C
Barber (2012)	51030	51030	JQ361665	LPV		I54V		T12S, I15V, L19I, E35D, M36I, R41K, R57K, H69K, V82I, L89M, I93L	C
	33245	33245	JQ361668	LPV			Q58E	T12S, L19I, M36I, R41K, D60E, L63A, H69K, L89M, I93L	C
	47235	47235	JQ361673	LPV		L76V		T12S, I15V, L19I, M36I, R41K, L63P, H69K, L89M, I93L	C
	69576	69576	JQ361677	LPV		I54V, V82A	L10F	T12S, I15V, L19I, M36I, R41K, L63T, H69K, L89M, I93L	C
	65994	65994	JQ361682	LPV		M46MI, I54V, V82A		L10I, T12S, I15V, L19V, M36I, R41K, K45KR, L63P, H69K, T74S, I93L	C
	56572	56572	JQ361684	LPV		V82A	L10F	I15V, G17D, L19I, M36I, D60E, L63P, H69K, L89M, I93L	C
Jones (2012)	146965	146965	JN669685	PI	NA			I15V, G16A, E35E_D, N37R, R41N, H69K, L89M, I93L	C
	176988	176988	JN670420	PI	NA			I15V, M36I, N37K, R41N, L63V, H69K, T74S, L89M, I93L	C
	188418	188418	JN670755	PI	NA			I15V, G16A, E35E_D, N37R, R41N, H69K, L89M, I93L	C

Protease Inhibitors

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