<!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

Protease Inhibitors

Subtype C
Gene PR
Mutation L89I
Rx PI-naive
IncludeMixtures No
References 85
Patients 203
Isolates 209
 
Show mutation frequency as:
Exclude mutations:

Sequences matching input query are shown below. Original reference, patient identifier, isolate name, partial treatment histories and accession number are indicated. Complete treatment histories, when available, can be accessed by clicking the isolate name. Sequences may additionally be downloaded in the fasta format, or viewed as individual or composite alignments using the options above. If the user wishes to view individual alignments of isolates for which there are multiple clones, the user can choose to view either an alignment of consensus sequences derived from the clones or an alignment of each clone as well as a consensus sequence.

Author (yr) Patient Isolate Acc# PIs WksPIMajorDRMs PIMinorDRMs OtherMutSubtype
Shafer (1999)Z2288Z2288AF083264None   T12S, I15V, L19I, M36I, R41K, H69K, L89I, I93LC
Dowling (2002)KER2010KER2010AF457054None   I13V, L19I, K20R, M36I, R41K, I62V, L63I, H69K, A71T, L89I, I93LC
Brindeiro (2003)BRC1526BRC1526AY213521None   I15V, M36IT, N37K, R41N, Q61E, L63P, H69K, L89I, I93LC
 BRC1524BRC1524AY213519None   I15V, M36IT, N37K, R41N, H69K, L89I, I93LC
 BRC1525BRC1525AY213520None   I13V, I15V, M36T, N37K, R41N, H69K, L89I, I93LC
Gordon (2003)ZA025p01ZA025p01AY136978None   T12A, I15V, L19E, M36I, R41K, L63P, H69K, L89I, I93LC
Jorgensen (2003)JLB_Pat23HIM419449AJ419449None   T12S, I13V, I15V, L19IM, M36I, R41K, I64IV, H69K, V82I, L89I, I93LC
 JLB_Pat50HIM419476AJ419476None   T12S, I15V, L19I, M36I, R41K, L63P, H69K, L89I, I93LC
Maljkovic (2003)MI_Pat1899SE16811AY165207None   T12S, I15V, L19T, M36I, R41K, L63P, H69K, L89I, I93LC
Soares (2003)BRP2083BRP2083AF527294None   Q2K, T12S, K14R, I15V, K20R, E35D, M36I, N37K, P39S, R41N, L63T, H69K, I72T, L89IC
Vaughan (2003)VHE_Pat66VHE133prrtAY267321None   T12S, I15V, L19T, M36I, R41K, D60E, L63P, H69K, L89I, I93LC
Deshpande (2004)in37in37AY515756None   T12S, I13V, K14R, L19I, L33V, N37S, R41K, L63P, H69K, V82I, L89I, I93LC
Montes (2004)MB_patVID99_VID711AJ578177None   I13V, K14R, I15V, M36I, R41K, L63P, H69K, L89I, I93LC
Snoeck (2004)BE72BE72AY900957None   L10V, T12S, I15V, L19I, M36I, R41K, H69Q, L89I, I93LC
Balakrishnan (2005)YRG43YRG43AY787529None   T12S, I15V, L19T, M36I, R41K, L63P, H69K, L89I, I93LC
Bessong (2005)01PB18ZA01PB18ZAAY510039None   T12S, I15V, L19I, M36I, P39Q, R41K, L63P, H69K, L89IC
Bussmann (2005)01BW0971S01BW0971SAY829270None   T12S, I15V, L19I, E35D, M36I, N37D, R41K, K45R, D60E, Q61E, I62V, L63T, H69K, L89I, I93LC
Non-B Workgroup (2005)BR1021BR1021AY900913None   Q2K, T12S, K14R, I15V, K20R, E35D, M36I, N37K, P39S, R41N, L63T, H69K, I72T, L89IC
 UK4799ASRU4799AY901216None   I3V, T12S, I15V, L19I, M36I, R41K, D60E, Q61D, H69K, V82I, L89I, I93LC
Bessong (2006)POB_02TS19ZA02TS19ZADQ222269None   I13V, I15V, L19I, M36I, R41K, D60E, L63P, H69K, L89I, I93LC
 POB_04J8820ZA04J8820ZADQ222276None   T12S, I15V, L19I, K20R, M36I, N37T, P39E, K45R, H69K, L89I, I93LC
Rey (2006)H3117DR_H3117 None   T12S, I15V, K20R, M36I, R41K, H69K, L89I, I93LC
Rodrigues (2006)BR04SP101BR04SP101DQ070624None   K14R, I15V, Q18L, E34K, E35K, N37K, R41N, H69K, L89I, I93LC
Rousseau (2006)Pt1803PS032MB1DQ445633None   T12S, K14R, I15V, L19I, M36I, R41K, L63P, G68X, H69K, L89IC
 Pt2331134MBAY463217None  V11IT12S, I15V, L19T, E35D, M36I, R41K, K45R, L63P, H69K, V82I, L89I, I93LC
Santos (2006)127PR127PRAY275780None   T12S, I15V, K20R, M36I, N37K, R41N, I62V, L63V, H69K, L89I, I93LC
Martinson (2007)CHB64BCHB64BEU152421None  L10F, V11I, N83DT12P, I15V, L19I, K20R, E34K, M36I, N37Q, H69K, V77I, V82I, L89I, I93LC
 CHB374MCHB374MEU152431None   T12S, I15V, L19I, K20R, E34K, E35N, M36I, P39Q, R41K, H69K, L89I, I93LC
 CHB374BCHB374BEU152432None   T12S, I15V, L19I, K20R, E35D, M36I, P39Q, R41K, H69K, L89I, I93LC
 KEH181MKEH181MEU152447None   T12S, I15V, L19I, M36I, R41K, L63P, H69K, K70KR, L89I, I93LC
 KEH181BKEH181BEU152448None   T12S, I15V, L19I, M36I, R41K, R57*, L63P, H69K, L89I, I93LC
 CHB188MCHB188MEU152457None   T12S, I13V, I15V, G16E, L19I, E35EK, M36I, R41K, D60E, H69K, L89I, I93L, L97IC
 CHB188BCHB188BEU152458None   T12S, I15V, G16E, L19I, M36I, R41K, D60E, H69K, I85V, L89I, I93LC
Novitsky (2007)10251025_0078EF026178None   T12S, I15V, L19V, M36L, N37S, R41K, H69K, L89I, I93LC
  1025_0773EF026179None   T12S, I15V, L19V, M36L, N37S, R41K, L63P, I64IM, H69K, L89I, I93LC
Soundararajan (2007)TRC36TRC36EF491942None  V11IT12S, I13V, L19I, K20R, M36I, N37D, R57K, L63P, H69K, K70R, V82I, L89IC
Vidal (2007)U071002BU.U0710AM260290None   T12S, I15V, L19I, M36L, N37K, R41N, H69K, L89I, I93LC
 U072702BU.U0727AM260291None   T12S, I15V, G16E, N37K, R41N, L63H, H69K, I72L, V82I, L89I, I93LC
 U080802BU.U0808AM260294None   T12S, I15V, G16E, L19I, K20R, M36I, N37K, R41N, R57K, L63H, H69K, K70R, L89I, I93LC
 U100502BU.U1005AM260302None   T12S, K14R, G16E, L19I, K20R, D25X, M36I, N37K, P39S, R41N, L63H, H69K, L89I, I93LC
von Wyl (2007)1485875832EF449980None   T12P, I15V, K20R, M36I, R41K, L63T, G68E, H69K, V82I, L89I, I93LC
  5055699EF449802None   T12P, I15V, K20R, M36I, R41K, L63T, G68E, H69K, V82I, L89I, I93LC
Arora (2008)24PI-24 None   T12S, K14R, I15V, G16E, L19I, M36I, R41K, L63T, H69K, L89I, I93LC
Ibe (2008)9999AB356162None   I15V, G16E, M36T, N37K, R41N, H69K, L89I, I93LC
 125125AB356179None   T12S, I15V, L19I, M36I, P39L, R41K, L63P, H69K, L89I, I93LC
Jacobs (2008)16801680EF602186None   T12S, I15V, L19I, R41K, K45R, L63Q, I66L, H69K, V77I, L89I, I93LC
Lahuerta (2008)P348409P348409_04EF407703None   T12S, I15V, L19T, K20R, M36I, R41K, L63P, H69K, V77I, L89I, I93LC
Matthews (2008)11341134FJ199536None  V11IT12S, I15V, L19T, E35D, M36I, R41K, K45R, L63P, H69K, V82I, L89I, I93LC
 PS109PS109FJ199683None   T12S, L19I, K20R, M36I, R41K, L63P, H69K, I72V, L89I, I93LC
 PS390PS390FJ199799None   K14N, L19I, M36I, R41K, D60E, L63P, H69K, L89I, I93LC
Pillay (2008)DR33DR33AY589890None   K14R, I15V, L19I, K20R, M36I, N37D, L63X, H69K, L89I, I93LC
Bartolo (2009)LFA1501AOLFA15EU068265None   T12S, I15V, G16E, L19I, K20M, M36L, N37S, L63N, H69K, L89I, I93LC
 HM18001AOHM180EU068320None   T12S, I15V, G16E, L19I, K20M, M36IL, N37S, L63N, H69K, L89I, I93LC
Eshleman (2009)A09917B607-156882FJ389056None   I13V, K20R, M36I, N37K, R41N, L63T, H69K, L89I, I93LC
Hosseinipour (2009)74487448GQ228278None  V11VII15V, L19T, K20R, M36I, R41K, H69K, L89I, I93LC
Kandathil (2009)CD07_012CD07_012EU683775None   T12S, I15V, G16E, L19I, M36I, R41K, L63N, H69K, L89I, I93LC
Orrell (2009)MD110707MD1107072005 None   T12S, L19V, M36I, R41K, K45R, R57K, L63P, H69Q, L89I, I93LC
Rajesh (2009)F11TRCFPR11FJ595473None   T12S, I15V, G16E, L19I, M36I, R41K, L63H, H69K, L89I, I93LC
Tu (2009)2PBMC2EU518252None   T12S, I15V, L19I, M36I, R41K, D60E, L63S, H69K, L89I, I93LC
  plasma2EU518301None   T12S, I15V, L19I, M36I, R41K, D60E, L63PS, H69K, L89I, I93LC
 45PBMC45EU518286None   T12S, I15V, L19I, M36A, R41K, K45KR, D60E, L63P, H69K, L89I, T91S, I93LC
  plasma45EU518335None   T12S, I15V, L19I, M36A, R41K, D60E, L63P, H69K, L89I, T91S, I93LC
Vercauteren (2009)pt31YgYVEmdcb2GQ400993None   T12P, I13V, I15V, M36I, N37K, R41N, K45R, D60E, L63P, G68E, H69K, I72V, L89I, I93LC
Wallis (2009)TJC2407957TJC2407957 None   T12S, I15V, L19V, M36I, R41K, L63P, H69K, L89I, I93LC
 TJC2387983TJC2387983 None   T12S, I15IV, L19I, M36I, R41K, L63LV, I66IV, H69K, I85IL, L89IC
 TJC2402512TJC2402512 None  V11VII15V, L19I, K20R, M36I, R41K, L63V, H69K, L89I, I93LC
 23427082342708 None   I15V, G16A, L19T, K20R, M36I, R41K, K43R, L63P, H69K, V77I, L89I, I93LC
 TJC2401849TJC2401849 None  V32VAI15V, Q18K, L19T, K20R, M36I, N37D, R41K, H69K, L89I, I93LC
 23499842349984 None   T12S, I15V, L19I, E35D, M36I, R41K, D60E, H69K, L89I, I93LC
 23557462355746 None   T12S, I15IV, L19I, M36I, R41K, L63LV, I66IV, H69K, I85IL, L89IC
Bonura (2010)1223_1161223_116GU969560None   L10V, I15V, G16GE, M36T, N37K, R41N, L63T, H69K, L89I, I93LC
Gonzalez (2010)KZ6KZ6GQ433842None   T12S, L19I, M36I, R41K, L63P, H69K, L89I, I93LC
 SO_7SO_7GQ433891None   K14E, I15V, G16E, L19T, M36I, R41K, K45R, D60E, Q61K, L63T, H69K, L89I, I93LC
Hattori (2010)C07-51110495C07-51110495AB864902None   T12S, I15V, L19I, M36I, R41K, L63T, H69K, L89I, I93LC
Mosha (2010)S66PolS66PolJQ071485None   L10LH, I15V, G16A, E35D, M36I, N37A, R41K, R57K, G68E, H69R, L89I, I93LC
Papathanasopoulos (2010)1718907ZA17189GU253401None   T12S, I15V, L19I, M36I, R41K, H69K, L89I, I93LC
 1750307ZA17503GU253413None   T12A, K14R, I15V, G16E, L19I, E35D, M36I, N37D, R41K, K45R, D60E, Q61E, L63S, H69K, L89I, I93LC
Tymchuck (2010)MW15MW15HM744724None   I15V, L19V, M36I, R41K, L63P, H69K, L89I, I93LC
Wright (2010)121SK121HM593128None   T12S, I15V, L19V, M36I, R41K, H69K, L89I, I93LC
 35SK35HM593355None  V11VIT12S, I15V, L19I, M36I, R41K, L63P, H69K, L89I, I93LC
 352SK352HM593358None   T12TS, I15V, L19I, M36I, R41K, L63V, H69K, L89I, I93LC
Yang (2010)20106934332010693433JQ616876None   T12S, I15V, G16E, L19I, M36I, L63V, H69K, L89I, I93LC
Bussmann (2011)B0549B0549JQ617031None   I15V, Q18H, L19V, E35D, M36I, R41K, K45R, D60E, L63P, C67Y, H69K, V82I, L89I, I93LC
de Medeiros (2011)Pat005RS097JF487834None   I15V, K20R, M36L, N37K, R41N, L63A, H69K, V77I, L89I, I93LC
Deshpande (2011)Pat051in1142JF414419None  V11VIT12S, I13IV, I15V, G16GE, L19IT, M36I, R41K, K45R, L63ST, H69K, K70K*, L89I, I93LC
 Pat015in1077JF414455None   T12S, K14KR, I15V, L19I, M36I, R41K, L63P, H69K, I72IV, L89I, I93LC
Ferreira (2011)BRMT2564BRMT2564HQ638713None   T12A, I15V, G16E, M36T, N37K, R41N, L63H, H69K, L89I, I93LC
 BRMT2822BRMT2822HQ638727None   I15V, M36T, N37K, R41N, K45R, H69K, L89I, I93LC
Graf (2011)SC11SC11JF773990None   I13V, L19I, K20R, M36I, N37K, R41N, H69K, L89I, I93LC
 SC38SC38JF774005None   L10I, I15V, M36T, N37K, R41N, L63T, C67G, H69K, L89I, I93LC
 SC97SC97JF774036None   I15V, M36T, N37K, R41I, L63I, H69K, T74S, L89I, I93LC
 SC130SC130JF774053None   T12A, K14R, I15V, G16E, M36I, N37K, R41N, H69K, L89I, I93LC
 SC133SC133JF774056None   I15V, G16A, K20R, M36I, N37K, R41N, K45R, L63V, H69K, L89I, I93LC
 SC138SC138JF774058None   I13V, I15V, K20R, M36I, N37K, R41N, H69K, L89I, I93LC
Green (2011)707PKE44F707PKE44FHM623530None   T12S, L19T, K20R, M36I, N37A, L63P, H69K, L89I, I93LC
Hamers (2011)300136CP076300136HM119712None   T12S, I15V, G16E, L19I, R41K, L63H, H69K, A71T, L89I, I93LC
 300208CP076300208HM119777None   T12S, I15V, L19T, K20R, M36I, P39Q, R41K, I62V, L63P, H69K, L89I, I93LC
 300268CP076300268HM119813None   T12S, I15V, L19I, K20R, M36I, R41K, H69HKNQ, L89I, I93LC
 300451CP076300451HM119872None   L10I, T12S, I15V, L19I, M36I, R41K, I62IV, L63H, H69K, L89IC
 300455CP076300455HM119876None   I15V, L19T, E35D, M36I, R41K, K45R, R57RK, D60E, Q61E, L63S, H69K, L89I, I93LC
 300474CP076300474HM119893None   T12S, K14R, I15V, G16E, L19I, K20R, M36I, R41K, K45KR, I62IV, L63H, H69K, I72IT, L89I, I93LC
 302344CP076302344HM120086None   T12PS, I15V, G16E, L19I, M36I, R41K, L63Q, H69K, L89I, I93LC
 CP076303157CP076303157HQ994177None   T12S, I15V, L19I, M36L, N37S, R41K, Q61QH, I62IV, L63LI, H69K, K70R, V82I, L89IC
 CP076303217CP076303217HQ994225None   I15V, L19M, K20R, M36I, R41K, K45KR, I62IV, L63H, H69K, L89I, I93LC
 CP076303222CP076303222HQ994228None   T12S, I15V, L19I, M36I, R41K, L63P, H69K, A71T, I72T, L89I, I93LC
 CP076303224CP076303224HQ994229None   T12S, I15V, L19I, M36I, R41K, K45R, D60E, L63P, C67Y, H69K, I72V, V82I, L89I, I93LC
 CP076303228CP076303228HQ994231None   T12S, L19I, M36I, R41K, K45KR, D60E, L63P, H69K, L89I, I93LC
 CP076305045CP076305045HQ994285None   T12S, I15V, L19T, M36I, R41K, D60E, Q61E, L63P, H69K, L89I, I93LC
 CP076300339CP076300339HQ994374None   T12S, I15V, L19I, K20R, M36I, R41K, L63Q, H69K, L89I, I93LC
 CP076300384CP076300384HQ994391None   T12S, I13V, I15V, L19I, K20R, M36I, N37S, R41K, L63HNPT, H69K, K70KR, L89I, I93LC
 CP076300396CP076300396HQ994400None   T12S, I15V, G16E, L19I, M36I, R41K, R57K, L63H, H69K, V82I, L89I, I93LC
 CP076301439CP076301439HQ994413None   T12S, I15V, G17A, L19I, M36I, N37S, R41K, L63P, H69K, L89I, I93LC
 CP076302114CP076302114HQ994487None   T12S, I15V, G16E, L19I, K20R, M36I, P39S, R41K, D60E, Q61E, H69K, L89I, I93L, L97LIC
 CP076300913CP076300913HQ994538None   T12S, I15V, L19I, M36I, R41K, L63T, H69K, L89I, I93LC
 CP076300943CP076300943HQ994719None   T12S, I15V, G16E, L19I, M36L, R41K, L63H, H69K, L89I, I93LC
 CP076300991CP076300991HQ994752None   I13V, K14T, L19T, K20R, M36I, R41K, D60E, L63P, I64L, H69K, L89I, I93LC
 CP076301043CP076301043HQ994774None   T12S, I15V, L19I, K20R, M36I, N37NDGS, L63S, H69K, K70Q, V77I, V82I, L89I, I93LC
 CP076302678CP076302678HQ994819None   K14R, I15V, L19V, K20R, M36I, P39Q, H69K, V82I, L89I, I93LC
 CP763A03365CP763A03365HQ994902None   V11D, I15V, L19T, M36I, R41K, D60E, Q61E, L63P, C67CY, H69K, A71AT, L89I, I93LC
Parboosing (2011)Pat047HRS30HQ844579None   T12S, L19I, N37S, H69K, V77I, L89I, I93LC
 Pat028HRS105HQ844598None   T12S, I15V, L19E, K20R, M36I, R41K, L63V, H69K, L89I, I93LC
Sanabani (2011)BR2040BR2040JN692442None   L10I, I15V, L19I, M36T, N37K, R41N, L63T, C67G, H69K, L89I, I93LC
Santos (2011)J207J207_PRJN010616None   I13V, K14R, G16E, L19I, M36I, N37K, R41N, H69K, L89I, I93LC
 J342J342_PR_RT_CN_RHJN010722None   I15V, L19LI, M36T, N37K, R41N, H69K, L89I, I93LC
van Zyl (2011)A16A16JN638093None   T12S, I15V, L19V, M36I, R41K, H69K, L89IC
 A173A173JN638102None   T12S, I15V, L19I, E35D, M36L, R41K, H69K, I72V, L89I, I93LC
 A246A246JN638143None  V11II15V, L19T, K20R, M36I, R41K, L63T, H69K, L89I, I93LC
 A271A271JN638163None   K14T, I15V, L19T, K20R, M36I, R41K, H69K, L89I, I93LC
 A367A367JN638208None   T12S, I15V, G16E, L19I, M36I, R41K, K45R, L63H, H69K, L89I, I93LC
Wright (2011)AS1-0323B2AS1-0323B2HQ696791None   K14M, I15V, L19T, K20R, E35EK, M36I, R41K, I62V, L63S, I64L, H69K, L89I, I93LC
 AS2-0110B2AS2-0110B2HQ696798None   I13V, G16E, L19T, K20R, E35D, M36I, R41I, L63H, H69K, K70R, L89I, I93LC
Zeng (2011)K53K53JF505596None   I15V, L19I, M36I, R41K, D60E, L63P, H69K, L89I, I93LC
 K76K76JF505604None   T12S, I13V, I15V, L19I, M36I, R41K, D60E, L63P, H69K, L89I, I93LC
Chen (2012)YN09DH0085YN09DH0085JQ658554None   T12S, K14R, I15V, G16GE, L19IV, M36I, R41K, L63LFPS, H69K, K70KR, V82VI, L89I, I93LC
 YN09DH0095YN09DH0095JQ658560None   Q7QR, T12S, K14KR, I15V, L19I, M36IT, N37S, R41K, L63P, H69K, L89I, I93LC
 YN09DH0107YN09DH0107JQ658570None   T12S, K14R, I15V, L19I, M36I, R41K, L63P, H69K, L89I, I93LC
 YN09DH0110YN09DH0110JQ658573None   T12S, K14KR, I15IV, L19I, M36I, R41K, K45R, D60E, L63P, H69K, L89I, I93LC
 YN09DH0111YN09DH0111JQ658574None   T12S, I15V, L19I, M36I, N37S, R41K, L63P, H69K, L89I, I93LC
 YN09DH0125YN09DH0125JQ658585None   T12S, K14R, I15V, L19I, M36I, R41K, L63P, H69K, L89I, I93LC
 YN09DH0132YN09DH0132JQ658591None   T12S, I15V, L19I, M36I, N37S, R41K, L63P, H69K, L89I, I93LC
 YN09DH0133YN09DH0133JQ658592None   T12S, I15V, L19I, M36I, N37S, R41K, L63P, H69K, L89I, I93LC
 YN10DH0110YN10DH0110JQ658731None   T12S, K14R, I15V, L19I, M36I, R41K, L63P, H69K, K70KR, V82VI, L89I, I93LC
 YN10DH0137YN10DH0137JQ658756None   T12S, K14R, I15V, L19I, E35Q, M36I, R41K, R57RK, H69K, K70KE, V82I, L89I, I93ILC
da Silveira (2012)BRMS37BRMS37JF342290None   I15V, M36I, N37K, R41N, H69K, K70R, L89I, I93LC
 BRMS47BRMS47JF342298None   L10V, I13V, I15V, L19I, M36T, N37K, R41N, K43R, L63T, H69K, L89I, I93LC
De Gascun (2012)IRL06795IRL06795JN622898None   I13V, K14S, L19M, M36I, R41K, K45R, D60E, L63P, H69K, L89I, I93LC
Gaspareto (2012)AO66AO66PTHM752186None   I13V, M36I, N37K, R41N, L63A, H69K, L89IC
Hingankar (2012)IN-NARI-4-097IN-NARI-4-097JN314973None   I13V, I15V, K20R, M36I, N37D, R41K, D60E, L63P, H69K, P79S, L89I, I93LC
Hunt (2012)GP06_189034GP06_189034KF736530None   T12S, I15V, L19I, K20R, M36L, R41K, L63S, C67Y, H69K, V77I, V82I, L89I, I93LC
 GP08_0483GP08_0483KF736650None   T12TA, I13V, I15IV, L19I, M36I, R41K, D60E, L63P, H69K, V75VI, L89I, I93L, L97IC
 KZN08_331579KZN08_331579KF736688None   I15V, L19I, K20R, M36L, R41K, L63P, H69K, V77I, L89I, I93LC
 GP07_216811GP07_216811KF736569None   T12S, I15V, L19I, K20R, E35D, M36I, R41K, H69K, L89I, I93LC
Iweriebor (2012)07B1ZA07B1ZAGU201798None   I15V, G17D, L19V, M36I, N37T, L63P, H69K, A71T, L89I, I93LC
 07M5ZA07M5ZAGU201809None   I15V, L19I, M36I, N37D, R41K, H69K, L89I, I93LC
Manak (2012)29_LH0129_LH01JN687651None   T12S, I15V, L19T, K20R, M36L, N37S, R41K, L63P, H69K, L89I, I93LC
 25_LH0225_LH02JN687649None   T12S, I15V, L19V, M36I, R41K, D60E, L63H, H69K, L89I, I93LC
 29_LH0229_LH02JN687652None   T12S, I15V, L19T, K20R, M36L, N37S, R41K, L63P, H69K, L89I, I93LC
Nwobegahay (2012)MC35ZAMC35ZAGU177519None   T12S, I15V, G16E, L19V, K20R, M36I, P39K, R41K, Q61H, L63Q, H69K, K70Q, L89I, I93LC
Yang (2012)KN-98KN-98JQ616927None   T12S, I15V, L19I, M36I, N37K, G40E, R41N, K45R, D60E, L63P, H69K, I72M, L89I, I93LC
Zeng (2012)CN1244CN1244JQ028391None   T12S, K14R, I15V, L19I, M36I, R41K, D60E, I62V, L63P, H69K, T74A, L89I, I93LC
Alencar (2013)SP2-0041SP2-0041JQ238082None   I15V, M36T, N37K, R41N, K45KR, L63T, H69K, I72IV, T74S, L89I, I93LC
Bila (2013)MzAng46HIV-1KF927366None   T12S, I15V, L19V, H69Q, K70R, L89I, I93LC
 MZ09-046HIV-1KF927203None   I15V, L19I, M36I, R41K, K45R, H69Q, L89I, I93LC
 MZ10-192HIV-1KF927292None   I15V, L19I, M36I, N37S, P39T, R41K, H69K, L89I, I93LC
 MZ09-085HIV-1KF927222None   K14R, G16E, L19T, K20R, M36I, R41K, L63T, H69K, L89I, I93LC
Ferreira (2013)BR09SP350BR09SP350HM534176None   I13V, K20R, M36I, N37K, R41I, Q61QE, L63LP, H69K, L89I, I93LC
Frentz (2013)EHR-03217EHR-03217JX299598None   I15V, L19LI, M36I, R41K, H69K, L89I, I93LC
 EHR-08272EHR-08272JX299674None   T12S, I15V, G16E, L19T, K20R, M36I, N37K, R41N, H69K, I72K, L89I, I93LC
 EHR-33919EHR-33919JX300115None   T12S, I15V, G16E, L19I, K20R, M36I, R41K, R57K, L63H, H69K, L89I, I93LC
 EHR-42789EHR-42789JX300261None   T12S, I15V, G16E, L19I, M36I, R41K, L63N, H69K, L89I, I93LC
 EHR-747144EHR-747144JX300813None   I15V, L19I, M36L, N37NS, R41K, L63LV, I66IT, H69K, K70R, L89I, I93LC
Han (2013)LX133IALX133IAJX070546None   T12S, I15V, L19I, M36I, N37S, R41K, L63P, H69K, L89I, I93LC
Hassan (2013)RS09000926RS09000926HQ441669None  V11VIT12S, I15V, L19V, K20R, M36I, N37KR, R41NS, R57K, Q61QH, L63T, H69K, V82I, L89I, I93LC
Hoffmann (2013)032195_1032195_1KJ081311None   T12S, I15V, L19I, K20R, M36I, R41K, L63I, H69K, L89I, I93LC
 449813_2449813_2KJ081327None   M36I, R41K, L63I, H69K, L89I, I93LC
Masimba (2013)TZ.HLM.009TZ.HLM.009KC537233None   L19M, M36I, N37K, R41N, H69K, L89I, I93LC
Mulu (2013)ETH-G-5839ETH-G-5839KF026195None  V11VIT12S, I15V, L19I, K20R, M36I, R41K, C67HR, H69K, L89I, I93LC
 ETH-G-5569ETH-G-5569KF026211None   I15V, L19I, M36I, R41K, L63H, H69K, L89I, I93LC
 ETH-G-5604ETH-G-5604KF026135None   T12P, K14R, I15V, G16E, M36I, R41K, L63H, H69Q, L89I, I93LC
 ETH-G-5487ETH-G-5487KF026064None   T12A, K14R, I15V, M36I, R41K, L63T, H69K, V82I, L89I, I93LC
Sigaloff (2013)MBA059_0MBA059_0JX182021None   I13V, I15V, K20R, M36I, N37K, R41N, L63T, H69K, P79D, V82I, L89I, I93LC
Van Zyl (2013)2891260KC423009None   I15V, Q18E, L19V, K20R, M36I, R41K, L63P, H69K, V77I, L89I, I93LC
  1360KC423091None   I15V, Q18E, L19V, K20R, M36I, R41K, L63P, H69K, V77I, L89I, I93LC
 2581835KC423448None   T12S, I15V, G16E, L19T, K20R, M36I, R41K, L63N, H69K, I72T, L89I, I93LC
 7811695KC423331None   T12S, K14R, I15V, L19T, M36I, N37S, R41K, K43R, L63P, H69K, L89I, I93LC
 5812028KC423572None   T12S, I15V, L19T, K20R, M36I, R41K, L63P, H69K, L89I, I93LC
 160499KC424097None   T12S, I15V, G16E, L19I, K20R, M36L, R41K, D60E, L63H, H69K, K70R, L89I, I93LC
 10751497KC423187None   T12S, I15V, L19I, M36I, R41K, D60E, Q61E, H69K, L89I, I93LC
 10301925KC423516None   T12S, L19I, K20R, M36I, R41K, R57K, D60E, Q61E, L63P, H69K, L89I, I93LC
 10891237KC422987None   T12S, I15V, L19I, M36I, R41K, D60E, L63P, H69K, L89I, I93LC
 9231766KC423389None   T12S, I15V, G16E, L19I, M36I, L63S, H69K, I72L, T74S, L89I, I93LC
 13621142KC422910None   T12S, I15V, G17D, L19I, K20R, M36I, N37D, L63P, H69K, L89I, I93LC
 16022010KC423561None   K14N, I15V, L19I, M36I, R41K, G49GE, D60E, L63P, H69K, I72V, L89I, I93LC
 1129247KC423726None   T12S, I15V, G16E, L19I, M36I, R41K, D60E, L63C, H69K, I72V, L89I, I93LC
 868376KC424021None   K14N, I15V, G16E, L19T, K20R, M36I, L63T, H69K, L89I, I93LC
 17942516KC423734None   T12S, I15V, G16E, L19I, M36I, R41K, H69K, L89I, I93LC
 4361880KC423480None   T12S, L19T, K20R, M36I, R41K, L63P, H69K, L89I, I93LC
 971987KC423544None   T12TS, K14R, I15V, L19I, K20R, M36I, N37D, L63V, H69K, L89I, I93LC
 1051337KC423992None   T12S, I13V, K14T, I15V, L19I, K20R, M36I, R41K, D60E, L63P, C67Y, H69K, L89I, I93LC
  1356KC423087None   M36I, R41K, K45R, D60E, L63P, C67Y, H69K, L89I, I93LC
 15641939KC423522None   T12S, I15V, G16E, L19T, M36I, L63T, H69K, L89IC
 12401125KC422897None   T12S, L19V, K20R, M36I, R41K, K43R, L63P, H69K, L89I, I93LC
 1000668KC424216None   T12S, I15V, G16E, L19I, E35D, M36I, R41K, V56I, L63A, H69K, T74S, L89I, I93LC
 610106KC422845None   T12P, I15V, G16E, L19V, M36I, R41K, L63H, H69K, L89I, I93LC
Lee (2014)MBA1423MBA1423KJ907108None   I15V, M36I, N37S, R41K, H69K, V82I, L89I, I93LC
Steegen (2014)11ZAKS13211ZAKS132KJ176414None   R41K, L63H, H69K, V77VI, L89I, I93LC
 12ZAKS32012ZAKS320KJ176599None   R41K, D60E, L63P, H69K, V82VI, L89I, I93LC
 11ZAKS10211ZAKS102KJ176384None   L63P, H69K, L89IC
 11ZAKS15211ZAKS152KJ176434None   R41K, R57K, D60E, I62V, L63T, H69K, A71T, L89I, I93LC