Author (yr) |
Patient |
Isolate |
Acc# |
PIs |
Wks | PIMajorDRMs |
PIMinorDRMs |
OtherMut | Subtype |
Kantor (2002) | TCDD-05 | TCDD-05_1 | AY090844 | SQV | 38 | L90M | | T12S, I15V, L19I, M36I, R41K, L63P, H69K, A71V, I93L | C |
Johnston (2003) | TC-71 | TC-71 | | IDV | 52 | G48V, I54T, V82A | | L10I, I15V, L19I, K20R, E35D, M36I, R41K, L63V, H69K, A71V, T74S, L89M, I93L | C |
Colonno (2004) | RC-034-067-562 | 067-5621 | AY461501 | ATV | | I50L | | K14R, I15V, L19I, K20T, E34EK, E35D, M36I, N37D, R41K, K55KN, D60E, I64IV, H69K, A71V, L89MT, I93L | C |
Grossman (2004) | IL266 | IL266 | AY529621 | SQV, RTV, IDV, NFV | 180 | I54IL, I84V, L90M | T74TP | R8RG, L10I, I15V, K20KI, E35EG, M36I, R41RK, L63P, H69K, A71V, L89M, Q92QR, I93L | C |
| IL280 | IL280a | AY529617 | SQV, IDV | 180 | I84V, L90M | | T12S, I15V, K20KR, M36I, R41RK, L63P, H69K, A71V, T74S, L89M, I93L | C |
| | IL280b | AY529616 | SQV, IDV | 201 | M46MI, I84V, L90M | | T12S, I15V, Q18L, D29DG, M36I, R41RK, L63P, H69KR, A71V, T74S, R87RT, L89M, I93L | C |
| IL287 | IL287 | AY529620 | SQV, RTV, IDV, NFV | 184 | I84V, L90M | | L5LI, L10I, T12S, I15V, L19I, E35D, M36I, R41K, L63T, H69K, A71V, T74S, I93L | C |
| IL384 | IL384a | AY529618 | IDV, SQV, RTV, NFV | 154 | M46I, I54V, V82A, L90M | T74P | W6WL, L10V, I15V, K20KI, M36I, N37D, R41K, L63P, H69K, A71V, L89M, I93L | C |
| | IL384b | AY529622 | IDV, SQV, RTV, NFV | 239 | M46I, I54V, V82A, L90M | T74P | L10V, I15V, M36I, N37D, R41K, K55R, I62V, L63P, H69K, A71V, L89M, I93L | C |
Montes (2004) | MB_patCOU | 02_COUL707 | AJ577870 | SQV, RTV, IDV, NFV | 221 | L90M | G73S | L10I, T12S, I15V, K20T, M36I, R41K, L63P, H69K, A71V, I93L | C |
Non-B Workgroup (2005) | UK186b | UK186b | AY900763 | SQV, RTV | 183 | I84V, L90M | V11VI, G73GS | L10I, I15V, G16E, L19I, R41K, L63H, H69K, A71V, V77I, I93L | C |
| UK231 | UK231 | AY900765 | RTV, NFV | 26 | L90M | L33I, K43T | Q18L, L19T, K20KMRT, E35N, M36I, R41K, D60E, Q61E, L63P, H69K, A71V, L89M, I93L | C |
| UK456b | UK456b | AY900773 | NFV, IDV, RTV | | M46I, L90M | | L10LI, T12S, L19I, K20I, M36I, R41K, L63P, I64V, H69K, A71V, T74S, L89M, I93L | C |
| UK955 | UK955 | AY900786 | SQV, RTV, IDV | 137 | I54V, I84V, L90M | G73S, L89V | L10I, I15V, L19I, K20IMV, E35D, M36I, R41K, D60E, I62IV, L63P, H69K, A71V, I85V, I93L | C |
| UK1447 | UK1447 | AY900803 | IDV, SQV, RTV | 83 | G48GA, I54V, V82A, I84V, L90M | L23LI, K43KT | L10Y, I15V, M36I, R41K, I62V, L63V, H69K, A71V, T74S, L89LM, I93L | C |
| IL80 | IL80 | AY900811 | RTV, NFV, SQV | 114 | I54V, V82A, I84V | K43T | W6WL, T12S, L19I, K20R, E21EG, M36I, G40E, R41K, L63P, H69K, A71V, T74A, I93L | C |
| UK1447b | UK1447b | AY900833 | IDV, NFV, SQV, RTV, APV, LPV | 175 | M46I, I50V, I54V, V82A, L90M | L10F, L23I, K43T | I15V, K20R, E35D, M36I, R41K, I62V, L63V, H69K, A71V, T74S, L89I, I93L | C |
| BR6 | BR6 | AY900885 | SQV, RTV, IDV | 306 | I54V, I84V, L90M | L89V | L10V, I13V, I15V, G16A, K20M, E35D, M36I, N37K, R41N, D60E, L63P, H69K, A71V, I93L | C |
| TK3015 | TK3015 | | SQV, IDV | 204 | I54V, V82A, L90M | K43T | L10I, T12S, I15V, L19I, K20I, E35D, M36I, R41K, D60E, Q61E, L63P, H69K, A71V, I85V, I93L | C |
| | TK3015a | | SQV, IDV, LPV | 264 | I54V, V82A, L90M | L10F, K43T | T12S, I15V, L19K, K20I, E35D, M36I, R41K, D60E, Q61E, L63P, H69K, A71V, I85V, I93L | C |
| | TK3015b | | SQV, IDV, LPV | 283 | I54V, V82A, L90M | L10F, K43T | T12P, I15V, L19K, K20I, E35D, M36I, R41K, D60E, Q61E, L63P, H69K, A71V, I85V, I93L | C |
| | TK3015c | | SQV, IDV, LPV, RTV, TPV | 375 | I54V, V82T, I84IV, L90M | K43T | L10I, T12S, I15V, L19I, K20IR, E35D, M36I, R41K, D60E, Q61E, L63P, H69K, A71V, I85V, L89LM, I93L | C |
| TK3016 | TK3016 | | SQV, NFV | 167 | I54V, L90M | T74P | L10V, I15V, E35D, M36I, R41K, H69K, A71V, L89M, I93L | C |
| TK3019 | TK3019 | | SQV, NFV, RTV | 143 | I54V, I84IV, L90M | V11VI, G73S | L10I, I13V, I15V, L19I, K20R, E35D, M36I, R41K, K45R, I62V, L63P, H69T, A71V, I72L, I93L | C |
| | TK3019a | | SQV, NFV, RTV | 149 | L90M | G73S, T74AP | I15V, L19I, E35D, M36I, R41K, I62V, L63P, H69T, A71V, I72L, I93L | C |
| TK3035 | TK3035 | | IDV, NFV, RTV | 202 | I54A, V82A | | L10I, T12S, I15V, L19I, K20R, E35D, M36I, R41K, K45KR, D60E, L63P, H69K, A71V, L89M, I93L | C |
| TK4011 | TK4011 | | SQV, RTV, NFV, IDV | 261 | V82A, L90M | Q58E, G73S | L10V, T12S, I15V, L19I, K20R, M36I, L63P, H69K, A71V, I72L, I93L | C |
| PL34057 | 96049 | | NFV | 82 | L90M | | I13V, I15V, L19T, K20T, E35G, M36I, P39PA, R41K, Q61QH, L63V, I64IV, H69K, A71V, T74S, L89I, I93L | C |
| PL42056 | 72786 | | IDV, RTV | 275 | V82A | L10F, L24I, I54C | T12TS, I13IV, G17D, L19I, K20R, M36I, R41K, K45R, L63P, H69K, A71V, L89I, I93L | C |
| | 91776 | | IDV, RTV, LPV | 340 | V82A | L10F, L24I, I54C | G17D, L19I, K20R, M36I, R41K, K45R, L63P, H69K, A71V, L89I, I93L | C |
Baxter (2006) | 12-3049 | 3049-30508 | DQ876115 | PI | NA | M46I, I54V, L76V, V82A, L90M | L10FI | W6W*, I15V, L19T, K20I, E35DN, M36I, R41K, Q61H, L63P, H69K, A71V, T74S, I85V, L89I, T91S, I93L | C |
| 12-3082 | 3082-30430 | DQ877155 | PI | NA | M46I, I84V, L90M | G73S | L10I, T12S, I13N, I15V, L19I, M36I, R41RK, Q61H, L63P, H69K, A71V, I72L, I93L | C |
| 48-1407 | 1407-30410 | DQ877803 | PI | NA | I54V, V82A, L90M | L10FI, K43T | T12PS, I15V, L19IK, K20I, E35D, M36I, R41K, D60E, Q61E, I62IV, L63P, H69K, A71V, I85V, I93L | C |
| 48-9302 | 9302-30918 | DQ877587 | PI | NA | I54V, V82A, L90M | L10F, G73GS, L89IMV | I15V, K20I, E35D, M36I, N37K, R41N, Q61H, L63P, H69K, A71V, I85V, I93L | C |
Doualla-Bell (2006) | Pt10 | FDB_Pt10 | | NFV | | D30N, L90M | L33F | I15V, G17D, L19V, E35D, M36I, N37K, R41K, L63P, H69K, A71V, I93L | C |
| Pt2 | FDB_Pt2 | | NFV | | L90M | | T12S, I13V, I15V, L19V, K20T, E35G, M36I, R41K, H69K, K70R, A71V, T74S, V82I, L89I, I93L | C |
Sen (2007) | T093 | NPT93 | EF186929 | RTV, IDV | | M46I, I54L, L90M | L23LI, G73ST | L10Y, T12S, L19T, K20I, L24LF, R41K, K45KR, K55KR, L63P, H69K, A71V, I72IM, V77I, I93L | C |
| | NPT93-PL | EF186978 | RTV, IDV | | M46I, I54IL, L90M | G73ST | L10Y, T12S, L19T, K20I, L24F, R41K, K45R, K55R, L63P, H69K, A71V, V77I, I93L | C |
| T076 | NPT76 | EF186928 | NFV, RTV | | M46L, V82A, L90M | T74P | L10V, T12A, I15V, L19I, K20R, M36I, N37D, K55N, L63P, H69K, A71V, I93L | C |
| | NPT76-PL | EF186980 | NFV, RTV | | M46L | T74P | L10I, T12S, L19I, K20R, M36I, K55N, L63P, H69K, A71V, L89M, I93L | C |
Pillay (2008) | DR13 | 02ZA.DR13 | AY589874 | NFV, RTV | | | L33LF | T4TP, T12S, I15V, L19V, E34EK, M36I, N37S, R41K, L63V, C67G, H69K, A71V, T74S, V77VIM, P79PA, P81PILT, G86GE, L89M, L90LF, T91TILP, Q92QK, I93FL, C95CS, T96TS, N98NS | C |
Waleria-Aleixo (2008) | 08PR060719 | 08PR060719 | FJ591541 | PI | NA | G48V, I54T, V82A | | L10I, I15V, L19I, K20R, E35D, M36I, N37K, R41N, L63T, H69K, A71V, T74S, I93L | C |
| 08PR050398 | 08PR050398 | FJ591423 | PI | NA | I50L | L10F, K43KT, Q58QE, T74TP, N88T | I15V, G16Q, K20R, E35D, M36I, N37K, P39S, R41N, I62IV, I64V, H69K, A71V, L89M, I93L | C |
| 08PR050311 | 08PR050311 | FJ591339 | PI | NA | L90M | K43T | I13V, I15V, K20T, E35D, M36I, N37K, R41N, I62V, L63LP, H69K, A71V, T74S, V82I, L89I, I93L | C |
| RES223 | RES223 | FJ591940 | PI | NA | I54V, L90M | L23I | I13V, K20R, E35D, M36I, N37K, R41N, I62V, L63P, H69K, A71V, T74S, L89I, I93L | C |
| 08PR050386 | 08PR050386 | FJ591411 | PI | NA | I54V, V82A, L90M | L10F, L33F, G73S | I15V, K20T, E35D, M36I, N37K, R41N, Q61H, L63P, C67F, H69K, A71V, I93L | C |
| 08PR050433 | 08PR050433 | FJ591430 | PI | NA | I54V, V82A, L90M | N88D | I15V, G16A, K20R, E35D, M36I, N37E, R41H, K45R, D60N, L63P, H69K, K70KT, A71V, L89I, I93L | C |
| 08PR060644 | 08PR060644 | FJ591499 | PI | NA | I54V, V82F, L90M | | K14KR, I15V, G16A, K20R, E35D, M36I, N37K, R41N, R57RK, L63LP, H69K, A71V, I93L | C |
| 08PR060539 | 08PR060539 | FJ591455 | PI | NA | M46I, I50L, V82A | L24I | L10I, I15V, K20R, E35D, M36I, N37K, R41N, K45R, L63V, H69K, A71V, T74S, L89M, I93L | C |
| 08PR040157 | 08PR040157 | FJ591188 | PI | NA | M46L, I54V, V82A, L90M | | L10R, L19LI, K20R, E35D, M36I, N37K, R41N, I62V, L63P, H69K, A71V, I93L | C |
| RES246 | RES246 | FJ591953 | PI | NA | I54IV | | I13V, K20T, E35DG, M36I, N37K, R41N, I62L, H69K, A71V, T74S, L89I, I93L | C |
| 08PR050444 | 08PR050444 | FJ591441 | PI | NA | D30N, I50L | N88D | K14R, I15V, G16E, E35D, M36I, N37K, R41Y, K45R, K55N, L63T, H69K, A71V, L89I, I93L | C |
| 08PR060628 | 08PR060628 | FJ591483 | PI | NA | M46L, G48V, I54T, V82A | | L10V, I15V, K20R, E35D, M36I, N37T, R41N, L63P, H69K, A71V, V75I, L89I, I93L | C |
| 08PR050239 | 08PR050239 | FJ591268 | PI | NA | I54V, I84V | L10F, L24I | T12P, K14KR, I15V, K20T, E35D, M36I, N37K, R41N, L63P, H69K, A71V, V77VI, P79L, L89M, I93L | C |
| 08PR060752 | 08PR060752 | FJ591548 | PI | NA | D30N | N88D | I13IV, I15V, K20T, M36I, N37K, R41N, L63P, H69K, A71V, I72IM, L89I, I93L | C |
Kassaye (2009) | TCDD-05 | TC05_2003 | FJ445702 | SQV | 147 | L90M | | W6W*, P9PR, T12S, I15V, L19I, E35D, M36I, R41K, L63P, H69K, A71V, I93L | C |
| TCDD-28 | TC28_2003 | FJ445707 | SQV | 361 | L90M | G73S | I15V, L19I, K20I, M36I, L63P, H69K, A71V, I93L | C |
| | TC28_2004 | FJ445727 | SQV, LPV | 378 | M46I, I84V, L90M | G73S | I15V, L19I, K20I, M36I, L63P, H69K, A71V, I93L | C |
Knops (2010) | ID2137 | ID2137-GT1 | GU271172 | IDV, LPV | | V32I, I47A, V82A | | L10I, T12S, I15V, L19AP, K20R, M36I, R41K, L63P, H69K, A71V, I85V, I93L | C |
| | ID2137-GT2 | GU271173 | IDV, LPV, DRV, RTV | 33 | V32I, I54L, L76V, V82A | L89V | L5F, L10I, T12S, I15V, L19T, K20R, M36I, R41K, L63P, H69K, A71V, I85V, I93L | C |
Sigaloff (2011) | HIV102176 | HIV102176 | JN132297 | IDV | | M46I, I54V, V82A | L24I | L19I, K20R, E35D, M36I, R41K, K45R, K55N, I62V, L63V, H69K, A71V, T74K, L89M, I93L | C |
Kouri (2012) | CU1737-09 | CU1737-09 | JQ585309 | PI | NA | M46MI, I54V, L76V, V82A | L10F, L24I, L33F | I13V, N37S, R41K, Q61QH, L63P, H69K, A71V, L89M, I93L | C |
| CU2016-09 | CU2016-09 | JQ585331 | PI | NA | M46I, I54M, V82A, L90M | K43T | L10V, K14R, L19I, K20R, E35D, M36I, R41K, L63P, H69K, K70KR, A71V, L89I, T91TS, I93L | C |
| CU1124-09 | CU1124-09 | JQ585275 | PI | NA | M46MI, I54V, L76V, V82A | L10F, L24I, L33F | I13V, N37S, R41K, L63P, H69K, A71V, L89M, I93L | C |
| CU2035-09 | CU2035-09 | JQ585332 | PI | NA | M46I, I54M, V82A, L90M | K43T | Q2H, L10V, K14R, L19I, K20R, E35D, M36I, R41K, L63P, H69K, K70KR, A71V, L89I, T91S, I93L | C |
Saravanan (2013) | YRG84 | YRG84 | KC016279 | PI | NA | M46I, L90LM | F53FL, G73S | T12S, I15V, L19I, K20T, E35D, M36I, R41K, K45R, L63P, H69K, A71V, T74S, I93L | C |
| YRG83 | YRG83 | KC016278 | PI | NA | M46I, L90M | G73S | T12S, I15V, L19I, K20T, E35D, M36I, R41K, K55N, Q61H, L63P, H69K, A71V, T74S, I93L | C |
| YRG76 | YRG76 | KC016271 | PI | NA | I54A, V82L, L90M | Q58E | L10I, I13IV, I15V, G16X, L19I, K20T, E35D, M36I, N37D, R57K, Q61N, L63T, H69K, A71V, L89M, I93L | C |
| YRG57 | YRG57 | KC016252 | PI | NA | I54V, V82A | K43KT, G73S | L10I, I15V, L19I, M36L, N37S, I62V, L63P, H69K, A71V, I72IM, I85IV, I93L | C |
| YRG55 | YRG55 | KC016250 | PI | NA | L90M | G73S | I15V, L19I, K20T, E35D, M36I, N37D, K45R, L63P, H69K, A71V, I85IV, I93L | C |
| YRG51 | YRG51 | KC016246 | PI | NA | I54V, V82A | L76S | L10I, T12S, I15V, L19I, K20R, M36I, R41K, K45R, I62V, L63A, H69K, A71V | C |
| YRG50 | YRG50 | KC016245 | PI | NA | I54V | M46V | I3V, I15V, E35D, M36V, N37D, D60E, L63P, H69K, A71V | C |
| YRG46 | YRG46 | KC016241 | PI | NA | M46I, L90M | G73S | T12S, I15V, L19I, K20T, E35D, M36I, R41K, K55N, Q61H, L63P, H69K, A71V, T74S, I93L | C |
| YRG43 | YRG43 | KC016238 | PI | NA | M46I, L76V, I84V | L10F | T12S, I15V, L19I, M36I, L38W, R41K, L63P, H69K, A71V, I93L | C |
| YRG40 | YRG40 | KC016235 | PI | NA | L90M | G73T | L10V, I15V, G17D, L19I, K20I, M36I, L63P, H69K, A71V, I93L | C |
| YRG34 | YRG34 | KC016229 | PI | NA | M46I, I54IV, L90M | G73S | T4TS, R8R*, I15V, L19I, K20T, E35ED, M36I, R41K, L63A, H69K, A71V, I93L | C |
| YRG30 | YRG30 | KC016225 | PI | NA | I54V, V82A, L90M | G73T | L10I, I15V, L19I, K20I, M36I, N37D, L63P, H69K, A71V | C |
| YRG23 | YRG23 | KC016218 | PI | NA | M46I, I54V, L76V, V82A | L10F, L24I | T12P, G16N, L19T, K20M, M36I, R41K, L63P, H69K, A71V, L89M, I93L | C |
| YRG22 | YRG22 | KC016217 | PI | NA | M46I, I54V, V82A, L90M | T74P | L10I, T12S, L19T, K20I, M36I, R41K, I62V, L63P, H69K, A71V, L89M, I93L | C |
| YRG19 | YRG19 | KC016214 | PI | NA | I54V, L90M | V11I | L10I, T12S, I15V, L19I, K20KR, M36I, R41K, I62V, L63S, I64L, H69K, A71V, L89LI, I93L | C |
| YRG17 | YRG17 | KC016212 | PI | NA | V32I, M46I, I54V, L76V, I84V | L10F, V11VI, Q58E | T12S, I15V, L19I, K20R, M36I, R41K, K55KR, L63P, C67CY, H69K, A71V, I93L | C |
| YRG10 | YRG10 | KC016205 | PI | NA | M46I, I54V, V82A, L90M | T74P | L10I, T12S, L19T, K20I, M36I, R41K, I62V, L63P, H69K, A71V, L89M, I93L | C |
| YRG06 | YRG06 | KC016201 | PI | NA | M46I, L76V, L90M | L10F | T12S, I15V, L19M, K20I, E21D, E35G, M36I, R41K, K55R, D60E, Q61E, I62V, L63P, H69K, A71V, I72M, I85V, I93L | C |
| YRG05 | YRG05 | KC016200 | PI | NA | D30N, M46MI, I54V, V82A | L10F, L33F, N88D | I15V, L19T, K20T, E35X, M36I, N37NT, R41K, L63P, I64IL, H69X, A71V, I93L | C |
| YRG04 | YRG04 | KC016199 | PI | NA | M46L, I54V | L10F, L33F | T12S, I15V, L19I, K20T, E35D, M36L, R41K, L63P, H69K, A71V | C |
| YRG01 | YRG01 | KC016196 | PI | NA | M46I, I54IV, I84V, L90M | L10F | T12S, L19I, K20KR, M36I, R41K, L63P, H69K, A71V, L89M, I93L | C |
Van Zyl (2013) | 504 | 09.ZA.WC054 | KC422808 | LPV | | I54V, V82A, L90M | L33F | T12S, L19I, E34Q, R41K, D60E, L63P, H69K, A71V, I93L | C |
| 753 | 10.ZA.WC072 | KC422997 | LPV | | M46MI, I54V, V82A, L90M | L10F, L33F, K43T, G73S | T12S, I13V, I15V, L19V, K20R, E35D, M36I, R41K, Q61H, L63P, H69K, K70KR, A71V, I93L | C |
| 174 | 11.ZA.WC194 | KC423723 | LPV | | M46I, I54V, L76V, I84V | L10F | I15V, L19I, K20R, M36I, R41K, Q61QH, L63PS, H69K, A71V, I93L | C |
| 288 | 11.ZA.WC125 | KC423356 | LPV | | M46I, I54V, L76V, V82M, L90M | V11VI, L33F | L10V, T12S, I13V, L19I, K20R, E35D, M36I, N37D, R41K, R57K, I62V, L63V, I64L, H69K, A71V, T74S, L89M, I93L | C |
| 771 | 11.ZA.WC161 | KC423531 | LPV | | M46I, I50V, I54V, V82A | | L10R, T12S, I15V, L19I, K20R, E35D, M36I, R41K, L63P, H69R, K70Q, A71V, I93L | C |
| 401 | 08.ZA.WC014 | KC423987 | LPV | | I54V, L76V, V82A | | L10V, T12TS, I15V, L19I, K20R, M36I, N37D, K55R, R57RK, D60E, I62V, L63P, H69K, A71V, L89M, I93L | C |
| 863 | 11.ZA.WC140 | KC423414 | LPV | | M46I, I50V, I54V, V82A | L10F, L33F | T12TS, I15IV, G16E, L19I, K20R, E35D, M36I, R41K, R57K, Q61H, L63S, H69K, A71V, L89M, I93L | C |
| 736 | 10.ZA.WC092 | KC423161 | LPV | | I54V, I84V | L10F, L23I, G73S, L89V | T4S, T12S, I15V, L19I, K20T, E35D, M36I, N37D, R41K, K45V, R57K, L63P, H69K, K70E, A71V, I72IM, P79PS, Q92K, I93L | C |
| 1152 | 11.ZA.NL004 | KC423718 | LPV | | M46I, I54V, L76V, V82A | L10F | I15V, L19IT, K20R, E35D, M36I, R41K, K55R, D60E, Q61E, I62V, L63P, H69K, A71V, L89M, I93L | C |
| 3622 | 09.ZA.GT912 | KC424397 | LPV | | I47A | F53L | T12S, I15V, L19I, K20T, E35D, M36I, R41K, K45R, L63P, H69K, A71V, I93L | C |
| | 10.ZA.GT1366 | KC423174 | LPV | | I47A, N88NS | F53L | T12S, I15V, L19I, K20T, E35D, M36I, R41K, K45R, D60E, L63P, H69K, A71V, I93L | C |
| | 10.ZA.GT1471 | KC423256 | LPV | | I47A | F53L | T12S, I15V, L19I, K20T, E35D, M36I, R41K, K45R, D60E, L63P, H69K, A71V, I93L | C |
| 2961 | 08.ZA.GT353 | KC424133 | LPV | | M46I, I50V, I54V, V82A | L23I | L10I, T12S, I15V, G16E, L19I, K20R, E35D, M36I, R41K, Q61HN, L63N, H69K, A71V, L89M, I93L | C |
| | 10.ZA.GT1445 | KC423234 | LPV | | M46I, I50V, I54V, V82A | L23I | L10I, T12S, I15V, G16E, L19I, K20R, E35D, M36I, R41K, Q61HN, L63H, H69K, A71V, I72IM, L89M, I93L | C |
| 2809 | 09.ZA.GT932 | KC424424 | LPV | | M46I, I54V, L76V, V82A | | L10I, T12S, L19I, K20R, M36I, R41K, K55R, D60E, L63P, H69K, A71V, L89M, I93L | C |
| | 10.ZA.GT1191 | KC423030 | LPV | | M46I, I54V, L76V, V82A | | L10I, T12S, L19I, K20R, M36I, R41K, K55R, D60E, I62V, L63P, H69K, A71V, L89M, I93L | C |
Acharya (2014) | DGP175 | DGP175 | KJ185345 | RTV, ATV | | M46I, I54V, V82A | L24I, K43T | L10V, T12S, K14R, I15V, L19I, M36I, R41K, L63P, H69K, A71V, L89M, I93L | C |
| DGP165 | DGP165 | KJ185335 | RTV, ATV | | M46I, I54V, V82A, L90M | L33I | L10V, T12P, I15V, L19I, M36I, Q61E, L63P, H69K, A71V, I93L | C |
| DGP162 | DGP162 | KJ185332 | RTV, ATV | | V32I, M46I, L76V, V82A, L90M | L10F, K43T | T12S, I15V, L19I, M36I, R41K, D60E, Q61E, L63T, H69K, A71V, I93L | C |
| DGP142 | DGP142 | KJ185312 | RTV, ATV | | I54V, L90M | N88D | T12S, I15V, L19I, M36L, N37S, R41K, L63P, H69K, K70R, A71V, V82I, L89M, I93L | C |
| DGP121 | DGP121 | KJ185291 | LPV | | M46I, I54V, L76V, V82A | L10F | T12S, K14R, I15V, L19T, M36V, N37D, L63P, H69K, A71V, I93L | C |
| DGP113 | DGP113 | KJ185283 | RTV, ATV | | M46I, I54V, L90M | T74P | L10I, T12S, I15V, L19T, M36I, R41K, L63A, H69K, A71V, I93L | C |
| DGP094 | DGP094 | KJ185264 | LPV | | M46I, L76V, I84V | L10F | T12S, I13V, I15V, L19T, M36I, R41K, L63P, H69K, K70R, A71V, L89M | C |
| DGP093 | DGP093 | KJ185263 | LPV | | M46I, I84V, L90M | | T12S, I15V, L19I, M36I, R41K, D60E, L63P, H69K, A71V, L89M, I93L | C |
| DGP089 | DGP089 | KJ185259 | RTV, ATV | | M46I, I54V, L76V, V82A | L10F, F53L | T12S, K14R, L19I, M36I, N37D, R41K, D60E, H69K, A71V, L89M, I93L | C |
| DGP072 | DGP072 | KJ185242 | RTV, ATV | | M46I, I54V, V82A | L24I, K43T | L10I, T12S, I15V, L19I, M36I, R41K, D60E, L63P, H69K, A71V, L89M, I93L | C |
Grossman (2014) | 609 | 609 | KF135112 | LPV | 52 | M46I, I54V, V82A, L90M | N83D, L89V | L10I, V11L, I13A, K20R, A22V, E35N, M36I, N37D, R41K, I62V, L63P, H69K, A71V, I93L | C |
| | 609 | | LPV | 134 | M46I, I54V, V82A, L90M | G73S, N83D, L89V | L10I, V11L, I13V, K20R, A22V, E35N, M36I, N37D, R41K, K55R, I62V, L63P, H69K, A71V, T91S, I93L | C |
| 1114 | 1114 | KF134952 | LPV | 52 | M46I, I54V, L76V, V82A | | L10V, T12S, I15V, L19I, K20R, M36I, R41K, L63V, E65ED, H69K, A71V, I72V, T74S, L89M, T91S, I93L | C |
| 255 | 255 | KF135031 | SQV, LPV | 52 | I54V, V82A | L10F, N88D, L89V | T12S, I13V, I15V, L19I, K20R, E35D, M36I, R57K, L63P, H69K, A71V, T74S, I93L | C |
| 49 | 49 | KF135089 | NFV, LPV | 52 | I54V, V82A, L90M | L10F, L33F, T74P | I13V, I15V, G16E, K20MT, E35N, M36I, R41K, R57K, Q61QHKN, I62IV, L63T, H69K, A71V, I93L | C |
| 97 | 97 | KF135173 | IDV, LPV | 52 | M46I, I54V, V82A, I84V, L90M | L10F | I13IV, I15V, K20R, M36I, R41K, L63P, H69K, A71V, L89LM, I93L | C |
| | 97 | KF135174 | IDV, LPV | 133 | M46I, I54V, L76V, V82C, I84V, L90M | L10F | T12Q, I15V, K20R, M36I, R41K, L63P, H69K, A71V, I93L | C |
| | 97 | KF135175 | IDV, LPV | 228 | M46I, I54V, L76V, V82C, I84V, L90M | L10F | T12Q, I15V, K20R, M36I, R41K, L63P, H69K, A71V, I93L | C |
| 946 | 946 | KF135166 | NFV, LPV | 177 | M46MI, I54V, L76V, V82A | L10F | T12S, I15V, L19I, K20R, M36I, N37ND, R41K, K55R, R57RK, I62V, L63P, H69K, A71V, I93L | C |
| 389 | 389 | KF135067 | SQV, LPV | 52 | I54IV, V82A, L90M | L10F, N88ND | Q7X, R8~, I15V, L19I, K20KR, M36I, R41K, Q61H, I62V, L63P, H69K, A71V, L89IM, I93L | C |
| 488 | 488 | KF135085 | SQV, LPV | 52 | G48A, I54V, V82A | L10F, L24I, Q58E | K20R, M36I, R41K, L63P, H69K, A71V, I72V, N83S, L89I, I93L | C |
| 52 | 52 | KF135095 | RTV, LPV | 115 | M46I, I54V, L76V, V82A, L90M | | L10V, K14KQ, I15V, L19V, K20R, M36I, N37D, R41K, Q61E, L63P, H69K, A71V, I72IT, L89M, I93L | C |
| | 52 | KF135096 | RTV, LPV | 194 | M46I, I54V, L76V, V82A, L90M | L10FV | I15V, L19V, K20R, M36I, N37D, R41K, Q61E, I62IV, L63P, H69K, A71V, I72IT, L89M, I93L | C |
| | 52 | KF135097 | RTV, LPV | 210 | M46I, I54V, L76V, V82A, L90M | | L10V, I15V, L19V, K20R, M36I, N37D, R41K, K55KR, Q61E, I62IV, L63P, H69K, A71V, I72IT, L89M, I93L | C |
| | 52 | KF135098 | RTV, LPV | 267 | M46I, I54V, L76V, V82A, L90M | | L10V, I15V, L19V, K20R, M36I, N37D, R41K, K55R, R57K, Q61E, L63P, H69K, A71V, L89M, I93L | C |
| | 52 | KF135099 | RTV, LPV | 314 | M46I, I54V, L76V, V82A, L90M | | L10V, I15V, L19V, K20R, M36I, N37D, R41K, K55R, R57K, Q61E, L63P, H69K, A71V, T74TS, L89M, I93L | C |
| 581 | 581 | KF135103 | IDV, LPV | 52 | L90M | | L10I, T12TA, L19I, K20I, E35ED, M36I, R41K, Q61H, L63P, I64L, H69K, A71V, T74S, I85V, L89M, I93L | C |
| | 581 | KF135104 | IDV, LPV | 187 | L90M | | L10I, L19I, K20I, E35D, M36I, R41K, Q61H, L63P, I64L, H69K, A71V, T74S, I85V, L89M, I93L | C |
| 160 | 160 | KF134989 | SQV, LPV | 52 | D30N | N88D | T12V, L19I, K20I, M36I, R41K, K45R, L63T, H69K, A71V, I93L | C |
| 260 | 260 | KF135035 | IDV, LPV | 384 | I54V, V82A, L90M | L10F | I15V, G16E, K20M, M36I, R41K, I62V, L63T, H69K, A71V, T74TS, L89I, I93L | C |
| 78 | 78 | KF135145 | RTV, LPV | 52 | M46I, I54V, L76V, V82A | L10F, L24I | I15V, K20R, E35D, M36I, N37D, R41K, K55R, I62V, L63P, H69K, A71V, I93L | C |
| 401 | 401 | | NFV, LPV | 52 | I54V, V82A | L10F | I15IM, M36AV, R41K, L63P, H69K, A71V, I93L | C |
Diaz (2015) | RenG16491 | RenG16491 | KT747519 | PI | NA | M46MI, I54V, L76V, V82A, L90M | L10FI | I15V, L19V, K20R, E35D, M36I, N37K, R41P, I62V, L63P, H69K, A71V, I93L | C |
| RenG17238 | RenG17238 | KT748266 | PI | NA | | | I15V, K20I, E35G, M36I, N37K, R41N, K45R, H69K, A71V, T74S, I85V, L89T, I93L | C |
| RenG16014 | RenG16014 | KT747042 | PI | NA | I50L | T74P | I15V, K20R, M36I, N37K, R41N, K45R, H69K, A71V, L89MT, I93L | C |
| RenG17176 | RenG17176 | KT748204 | PI | NA | I50L, V82A, L90M | G73S | I15V, G16A, K20R, E34Q, E35D, M36I, N37K, R41N, K45R, L63P, I66L, H69K, A71V, I93IL | C |
| RenG17353 | RenG17353 | KT748381 | PI | NA | M46I, I54V, L76V, V82A | L10F, L33F | I13V, K14KR, K20R, E35D, M36I, R41N, I62V, L63T, H69K, A71V, I72V, T74TA, L89M, I93L | C |
| RenG16120 | RenG16120 | KT747148 | PI | NA | | | I15V, K20T, M36I, N37K, R41N, I62IMV, H69K, A71V, L89M, Q92R, I93L | C |
| RenG16730 | RenG16730 | KT747758 | PI | NA | M46I, L90M | L10F, L33F | I15V, L19I, K20R, E35D, M36I, N37K, R41N, D60E, L63P, H69K, A71V, N88E, L89I, I93L | C |
| RenG15586 | RenG15586 | KT746614 | PI | NA | M46I, I54V, I84V, L90M | | L10V, I13V, I15V, K20R, E35D, M36I, N37K, R41N, D60E, I62V, L63P, H69K, A71V, L89I, I93L | C |
| RenG15743 | RenG15743 | KT746771 | PI | NA | M46I, I50L, V82A | L24I, L33F, K43T | L10I, I13V, K14KR, I15V, M36L, N37K, R41N, K55R, D60DEKN, I62V, L63P, H69K, A71V, T74S, I93L | C |
| RenG17048 | RenG17048 | KT748076 | PI | NA | M46I, I54L, L90M | L33F, Q58E, N88G, L89V | L10Y, I13V, I15V, K20T, E35D, M36I, N37Q, R41N, K43R, I62V, L63P, H69K, A71V, T74S, Q92K, I93L | C |
| RenG15557 | RenG15557 | KT746585 | PI | NA | M46I, I54V, L76V, V82C, L90M | | T12AS, I15V, G16E, L19P, K20T, E35G, M36I, N37K, R41N, K55R, R57RK, Q61N, L63N, H69K, A71V, I72R, L89I, I93L | C |
| RenG16680 | RenG16680 | KT747708 | PI | NA | I54V, L76V, V82A | | L10V, I15V, K20R, D25DN, E35D, M36I, N37K, R41N, R57RK, Q61DN, I62V, L63P, H69K, A71V, L89M, I93L | C |
| RenG15974 | RenG15974 | KT747002 | PI | NA | M46MI, I50L | L23LI, L33F, F53FL, N83ND | L10LR, I13V, I15V, E35D, M36IL, N37K, R41N, I62V, L63V, H69K, A71V, T74A, L89IM, I93L | C |
| RenG15801 | RenG15801 | KT746829 | PI | NA | I50L, V82L | | I15V, G16E, K20R, E35D, M36I, N37K, P39S, R41N, K45R, G68E, H69R, A71V, L89I, I93L | C |
| RenG16022 | RenG16022 | KT747050 | PI | NA | I50L, V82IL | L33F | K14KR, I15V, K20T, M36I, N37K, R41N, H69K, A71V, L89I, I93L | C |
| RenG15516 | RenG15516 | KT746544 | PI | NA | I54V, V82VA, I84V, L90M | L10F, L23I, Q58E | I15V, K20R, E35D, M36I, N37K, R41N, R57RK, D60DE, I62IV, L63P, H69K, K70KR, A71V, L89I, T91TS, I93L | C |
| RenG17080 | RenG17080 | KT748108 | PI | NA | I50L, V82M, L90M | Q58E, L89V | I13V, K20R, E35D, M36I, N37K, R41N, L63P, H69K, K70T, A71V, I93L | C |
| RenG16982 | RenG16982 | KT748010 | PI | NA | M46L, I54IV, V82A | L10LFPS, L23I, L33F, F53FL | P9PR, T12I, I13V, I15V, G16E, M36L, N37K, R41R_N, G51A, D60E, I62LV, L63T, H69K, A71V, L89I, T91TA, I93L | C |
| RenG16794 | RenG16794 | KT747822 | PI | NA | I50L | L23LI, L89AMTV | I15V, K20KR, E34ED, E35ED, M36I, N37K, R41N, L63V, H69K, A71V, T74TS, I93L | C |
| RenG15346 | RenG15346 | KT746374 | PI | NA | M46MI, I54V, V82VA, I84V, L90M | L10F, L23LI, L33F, F53FL, G73S, T74PS, L89V | V11L, I13V, I15V, K20T, E34Q, E35D, M36IL, N37K, R41N, I62V, L63P, G68D, H69R, A71V, I93L | C |
| RenG14474 | RenG14474 | KT745502 | PI | NA | M46I, I54V, V82A, I84V, L90M | L10F, K43KT | I15V, L19I, K20R, E35D, M36I, N37K, R41N, L63P, H69K, A71V, I85V, L89I, Q92K, I93L | C |
| RenG14788 | RenG14788 | KT745816 | PI | NA | M46I, I54V, L76V, V82F, L90M | L33F | L10I, I13V, K20R, E35D, M36I, N37K, R41Y, R57RK, Q61N, L63P, H69K, A71V, L89M, I93L | C |
| RenG14916 | RenG14916 | KT745944 | PI | NA | I50L, V82M, L90M | L23I, L33F | I13V, I15V, K20T, E35N, M36I, N37K, R41N, Q61E, L63PS, H69KN, A71V, T74S, L89I, I93L | C |
| RenG15117 | RenG15117 | KT746145 | PI | NA | I54L, L90M | T74P, N88NT | K14R, I15V, G16E, K20T, E35D, M36I, N37K, P39S, R41N, I62V, H69K, A71V, V82I, L89M, I93L | C |
| RenG14615 | RenG14615 | KT745643 | PI | NA | I54IV, L90M | L10F, T74TP | I15V, K20R, E35D, M36I, N37K, R41N, R57RK, I62V, L63P, H69K, A71V, L89M, I93L | C |
| RenG14186 | RenG14186 | KT745214 | PI | NA | D30N, M46L, I54V, V82A | Q58QE, N88D | L10R, I15V, K20T, E35D, M36I, N37K, R41N, D60DE, Q61QH, L63P, I64IL, H69K, A71V, L89I, I93L | C |
| RenG14901 | RenG14901 | KT745929 | PI | NA | M46ML, G48GA, I54V, I84V, L90M | L10F, T74P, L89V | I15V, K20T, E35DN, M36I, N37K, R41H, Q61QH, I62IV, L63P, H69K, A71V, I85V, T91CS, I93L | C |
| RenG13600 | RenG13600 | KT744628 | PI | NA | M46I, I50L, L90M | L23I | I15V, K20T, E35D, M36I, N37K, R41N, L63PT, H69K, A71V, T74S, I85IV, L89I, I93L | C |
| RenG14834 | RenG14834 | KT745862 | PI | NA | M46I, I54V, L76V, V82F, L90M | L33F | L10I, I13V, I15IV, K20R, E35D, M36I, N37K, R41N, Q61N, L63P, G68GE, H69K, K70KR, A71V, L89IM, I93L | C |
| RenG14493 | RenG14493 | KT745521 | PI | NA | I50L | L33LF | I15V, E35D, M36I, N37K, R41N, R57K, Q61QH, L63V, H69K, A71V, T74A, L89I, I93L | C |
| RenG12144 | RenG12144 | KT743172 | PI | NA | V32I, I54L, I84V | L10F, L33I, L89V | I13V, I15V, K20T, M36I, N37K, R41N, Q61N, L63P, I66FV, H69K, A71V, T74S, V77I, Q92K | C |
| RenG12731 | RenG12731 | KT743759 | PI | NA | | | I15V, K20T, E35D, M36I, N37NK, R41N, K45R, L63C, H69K, A71V, T74TS, L89T, I93L | C |
| RenG12371 | RenG12371 | KT743399 | PI | NA | I50L | T74P | L10LIV, K14KR, I15V, Q18T, N37K, R41N, K45R, L63LP, H69K, A71V, V77I, L89M, I93L | C |
| RenG13298 | RenG13298 | KT744326 | PI | NA | M46I, I54V, L76V, L90M | | I15V, L19I, K20T, E35D, M36I, N37E, R41H, R57K, Q61R, I62V, L63LP, H69R, A71V, V82I, L89I, I93L | C |
| RenG12983 | RenG12983 | KT744011 | PI | NA | I54V, V82A, L90M | | L10I, K20R, E35D, M36I, N37K, R41P, Q61QK, L63P, H69K, A71V, I72V | C |
| RenG13433 | RenG13433 | KT744461 | PI | NA | I50L, V82M | L24I, K43KT | T12P, I15S, G16R, K20RT, E34KN, E35D, M36I, N37K, R41N, K45KR, L63T, G68E, H69K, A71V, I72IT, T74A, Q92K, I93L | C |
| RenG11973 | RenG11973 | KT743001 | PI | NA | D30N | | I15V, K20T, E35D, M36I, N37K, R41N, G68E, H69K, A71V, I93L | C |
| RenG12329 | RenG12329 | KT743357 | PI | NA | M46ML, I50L, V82VA, N88NS | L33F, T74TP | L10LH, I15IV, E35D, M36I, N37K, R41N, D60E, I62IV, L63P, H69K, A71V, L89M, I93L | C |
| RenG12462 | RenG12462 | KT743490 | PI | NA | I54V, V82A | | L10IV, K14R, I15V, K20R, E35D, M36I, N37K, R41N, I62V, L63T, H69K, A71V, T74S, L89M, I93L | C |
| RenG10325 | RenG10325 | KT741353 | PI | NA | I50L, V82M | L23LI, L33F, F53L | T12TA, I13V, K14KR, I15V, K20R, E35D, M36L, N37K, R41N, L63P, H69K, A71V, T74S, L89M, I93L | C |
| RenG10554 | RenG10554 | KT741582 | PI | NA | M46L, I54V, V82M, L90M | L33F, F53L | L10V, I15V, G16E, L19I, K20R, E35D, M36I, N37T, P39Q, R41N, K55R, I62V, L63AITV, H69K, A71V, T74S, V77I, L89M, I93L, C95L | C |
| RenG11113 | RenG11113 | KT742141 | PI | NA | I54L, I84IV | T74P, L89MV | I15V, K20T, E35D, M36MI, N37K, R41N, L63P, H69K, A71V, V82I, T91S, I93L | C |
| RenG11086 | RenG11086 | KT742114 | PI | NA | M46I, I47A, I84V | F53L | L10V, G16E, E35D, M36V, N37E, P39S, R41N, I62V, L63T, H69R, A71V, T74S, L89M, I93L | C |
| RenG11410 | RenG11410 | KT742438 | PI | NA | I54V, V82A, L90M | | L10V, I13A, K20V, A22V, E35N, M36I, N37K, R41H, R57RK, D60E, I62V, L63P, I64V, H69K, A71V, I93M | C |
| RenG11494 | RenG11494 | KT742522 | PI | NA | I50L, V82L, L90M | L33F, K43T | T12S, I13V, I15V, K20R, E35D, M36IV, N37K, R41N, Q61HN, L63T, I64V, H69K, A71V, T74S, L89M, I93L | C |
| RenG11100 | RenG11100 | KT742128 | PI | NA | I50L, V82M | T74P | I15V, G16E, L19Q, K20R, E35D, M36I, N37K, P39PS, R41N, K45R, L63T, H69K, A71V, I72IV, I93L | C |
| RenG10299 | RenG10299 | KT741327 | PI | NA | M46I, I54V, L76V, V82A | | L10V, I15V, L19V, K20R, M36I, N37K, R41N, I62V, L63P, H69K, A71V, L89M, I93L | C |
| RenG11227 | RenG11227 | KT742255 | PI | NA | I50L, V82A, L90M | L33F | T12S, I13V, I15V, L19I, K20R, E35D, M36I, N37E, R41N, K45R, L63P, H69K, A71V, T74A, L89I, I93L | C |
| RenG10331 | RenG10331 | KT741359 | PI | NA | M46I, I50L, V82A | T74P | L10I, I15V, L19I, K20R, M36I, N37K, R41N, I62IV, L63V, H69K, A71V, L89M, I93L | C |
| RenG11741 | RenG11741 | KT742769 | PI | NA | M46MI, I54V, V82A, L90M | L33F, K43T, N88D | L10V, I13V, K20R, E35D, M36I, N37K, R41N, I62V, L63P, H69K, A71V, T74KR, L89M, I93L | C |
| RenG11471 | RenG11471 | KT742499 | PI | NA | I54V, V82A | K43T, T74P | L10I, I15V, L19LI, K20R, E35D, M36I, N37K, R41INS, R57K, I62V, L63V, I64V, H69K, A71V, L89M, I93L | C |
| RenG10615 | RenG10615 | KT741643 | PI | NA | I50L, N88S | L33F, T74P | I13IV, I15V, K20R, E35D, M36I, N37K, R41N, L63LP, H69K, A71V, L89M, I93L | C |
| RenG10491 | RenG10491 | KT741519 | PI | NA | I50L, V82VA, N88S, L90LM | L33F | L10M, I13V, I15IV, K20R, E35D, M36I, N37K, R41N, K45R, H69K, A71V, L89I, I93L | C |
| RenG10982 | RenG10982 | KT742010 | PI | NA | M46I, I50V, I54V, V82A, L90M | V11I, L33F, K43T, T74P | L10I, I13V, I15V, K20R, E35D, M36I, N37K, R41N, I62IV, L63P, H69R, A71V, L89LM, I93L | C |
| RenG10394 | RenG10394 | KT741422 | PI | NA | G48V, I54T, V82A | | L10I, I15V, K20R, E35D, M36I, N37K, R41N, Q61H, L63V, H69K, A71V, I72IR, T74S, I85V, L89I, I93L | C |
| RenG10493 | RenG10493 | KT741521 | PI | NA | L90M | L23LI, F53L, G73GS, L89IV | I13V, I15V, K20T, E35D, M36I, N37K, R41N, L63P, H69K, A71V, T74K, V77VI, I93L | C |
Rossouw (2015) | RP123-1 | RP123-1 | KT032043 | PI | NA | M46I, I47V, I54V, L76V, V82A | Q58E | L10V, I15V, L19I, K20R, M36I, K55KR, D60E, L63P, H69K, A71V, L89M, I93L | C |
| MIV001 | MIV001 | KT032063 | LPV, RTV | 159 | I54V, V82A, L90M | Q58E, G73T | I15V, L19I, K20R, M36I, R41K, I62V, L63P, H69K, A71V, I93L | C |
| RP125 | RP125 | KT032044 | RTV, LPV | 138 | I54L | V82~ | L19I, K20R, E35D, M36I, R41K, L63A, H69K, K70Q, A71V, I93L | C |
| RP138 | RP138 | KT032050 | LPV, RTV | 231 | M46I, I54V, L76V, V82A | L10F | I15V, L19V, K20R, E35D, M36I, R41K, K55R, R57K, D60E, I62V, H69K, A71V, L89M, I93L | C |
| RP104 | RP104 | KT032036 | LPV | 124 | M46I, I50V, I54V, V82A | | L10I, T12S, I15V, L19V, K20R, T31TI, E35D, M36I, R41K, L63P, H69K, K70R, A71V, V77I, L89M, I93L | C |
| RP169 | RP169 | KT032059 | LPV, RTV | 286 | I54V, L76V, V82A | | E35D, M36I, N37ND, R41K, R57K, L63P, H69K, A71V, T74S, L89IM, T91TI, I93L | C |
Neogi (2016) | 7114 | 13.ZA.EC517 | KT592727 | LPV | | M46I, I50IV, I54V, V82A | L10F, L23LI, L24LI, L33F | T12S, L19I, N37S, R41K, L63P, H69K, A71V, I93L | C |
| 5581 | 13.ZA.EC755 | KT592886 | LPV | | M46I, I54V, L76V, V82A | L10F, K43T | I15V, L19I, M36MI, I62V, L63P, H69K, A71V, L89M, I93L | C |
Steegen (2016) | ZA13GFECC018 | ZA13GFECC018 | KU252932 | LPV | | I54V, L76V, V82VA | Q58QE | L10LI, T12S, I15V, L19V, K20R, M36I, R41K, L63P, H69K, A71V, L89M, I93L | C |
| ZA13GFGPC050 | ZA13GFGPC050 | KU252945 | LPV | | I47A, I50V | Q58QE | G16E, L19I, K20R, E35D, M36I, P39S, Q61H, I62V, H69X, A71V, V82I, L89M, I93L | C |
| ZA13GFKZC002 | ZA13GFKZC002 | KU252972 | LPV | | M46I, I47A, I84V | F53L | L10LI, T12S, I15V, L19I, R41K, L63P, H69K, A71V, V77I, L89M, I93L | C |
| ZA13GFMPC010 | ZA13GFMPC010 | KU253013 | LPV | | M46MI, I54V, V82A | L10F, L24I, L33F, Q58E | T12TS, L19I, K20R, E35D, M36I, R41K, D60E, Q61D, L63P, H69K, A71V, I93L | C |
| ZA13GFGPC083 | ZA13GFGPC083 | KU253031 | LPV | | I54V, V82A | L10F | I15V, L19I, K20T, E35D, M36I, R41K, L63P, H69Q, A71V, I93L | C |
| ZA14GFKZC076 | ZA14GFKZC076 | KU253086 | LPV | | I54V, L76V, V82A | L10F | I15V, L19I, K20R, E35D, M36I, R41K, L63P, H69K, A71V, L89M, I93L | C |
| ZA14GFKZC092 | ZA14GFKZC092 | KU253102 | LPV | | M46I, I54V, L76V, V82A | L10F, L24LI | T12P, I15V, G16E, L19X, K20T, E35ED, M36MI, R41RK, Q61X, I62IV, L63T, H69K, A71V, I72T, L89LM, I93L | C |
| ZA14GFKZC121 | ZA14GFKZC121 | KU253122 | LPV | | I54V, L76V, V82A | L10F | I15V, L19T, K20R, M36I, N37D, R41K, D60E, I62IV, L63T, H69K, A71V, I72IT, L89M, I93L | C |
| ZA14GFLPC006 | ZA14GFLPC006 | KU253131 | LPV | | I54V, V82A | | L10R, T12S, I15V, L19I, K20R, M36I, R41K, Q61H, L63P, H69K, A71V, V77I, I93L | C |
| ZA14GFKZC126 | ZA14GFKZC126 | KU253132 | LPV | | M46I, I50V, I54V, V82A | L10F, L23I, L33F | I15V, G16A, L19V, N37T, R41K, L63P, H69K, A71V, L89M, I93L | C |
| ZA14GFMPC033 | ZA14GFMPC033 | KU253196 | LPV | | M46I, I47A, I54V | L10F | L19I, K20R, E35D, M36I, R41K, D60E, L63D, H69K, A71V, I72T, L89M, I93L | C |
| ZA14GFKZC185 | ZA14GFKZC185 | KU253202 | LPV | | M46I, I54V, L76V, I84V | | L10I, T12S, I15V, L19I, K20T, M36I, R41K, D60E, L63P, H69K, K70KR, A71V, V82I, L89M, I93L | C |
| ZA14GFKZC194 | ZA14GFKZC194 | KU253213 | LPV | | I54V, L76V, V82A | | L10I, I15V, L19I, K20R, E35D, M36I, R41K, K45R, I62V, L63A, H69K, A71V, I72IV, L89M, I93L | C |
Posada Cespedes (2017) | 1296 | 15.ZA.EC1676 | | LPV | | M46I, I54V, L76V, V82A | L10LF | I15V, L19I, N37D, R41K, K55R, R57K, Q61HN, I62IV, L63P, I64IM, H69K, A71V, I72V, V77I, L89M, I93L | C |
| 388 | 14.ZA.GT3636 | KX544459 | LPV | | I54V, V82A | | T12S, I15V, L19T, K20R, E35D, M36I, R41K, H69K, A71V, L89M, I93L | C |
| 4853 | 15.ZA.GT3954 | | LPV | | M46I, I54V, L76V, V82A | L10F | T12S, I15V, Q18QE, L19I, K20R, M36I, R41K, K55R, R57K, I62V, L63P, H69K, A71V, I72IV, L89M, I93L | C |
| 3938 | 11.ZA.GT1673 | KX541192 | LPV | | I54V, V82A, L90M | L10F, L33F, Q58E, G73S | I13IV, I15V, L19I, K20R, E35D, M36I, R41K, I62V, L63P, H69K, A71V, V77I, I93L | C |
| 2492 | 09.ZA.GT933 | KX540398 | ATV | | I50L, N88S | L33F, G73S | T12S, I13V, I15V, L19I, K20R, E35D, M36I, R41K, K45R, L63P, H69K, A71V | C |
| 897 | 13.ZA.WC283 | KX543553 | LPV | | I54V, L76V, V82A | | L10V, K14H, I15V, L19T, K20R, M36I, N37D, I62V, L63P, H69K, A71V, I93L | C |
| 573 | 14.ZA.EC1425 | KX544019 | LPV | | M46I, I54V, L76V, V82A | L10F, K43KT | T12S, I15V, L19I, N37ND, R41K, K55R, R57K, L63P, H69K, A71V, L89M, I93L | C |
| 4516 | 14.ZA.WC558 | | LPV | | M46I, I54V, L76V, V82A, L90M | Q58E | L10I, T12S, I15V, L19I, K20R, E35D, M36I, R41K, K55KR, R57RK, D60E, Q61E, I62V, L63P, H69K, A71V, L89M, I93L | C |
| 1298 | 15.ZA.EC1686 | | LPV | | V82F | L33LF, F53L | L10I, I13V, I15V, L19I, K20R, L23V, E35D, M36I, R41K, L63P, I64V, H69K, A71V, T74S, I85V, L89I, Q92K, I93L | C |
| 4072 | 14.ZA.GT3478 | KX544336 | LPV | | I54V, L76V, V82A | L10F | T12S, I15V, L19I, K20R, M36I, R41K, I62IV, L63P, H69K, A71V, L89M, I93L | C |
| 974 | 13.ZA.WC360 | KX543626 | LPV | | M46MI, I54V, L76V, V82A, I84V | Q58E | L10I, I15V, L19I, K20R, E35D, M36I, N37D, K55KR, L63P, H69R, A71V, L89M, I93L | C |
| 900 | 14.ZA.WC494 | KX544752 | LPV | | | | T12S, I15V, L19I, M36I, N37D, L63V, H69K, A71V, V75I, I93L | C |
| 2961 | 11.ZA.GT1507 | | LPV | | M46I, I50V, I54V, V82A | L23I | L10I, T12S, I15V, G16E, L19I, K20R, E35D, M36I, R41K, Q61N, L63H, H69K, A71V, I72IM, L89M, I93L | C |
| 251 | 12.ZA.GT2055 | KX541937 | LPV | | M46I, I47IV, I54V, L76V | | I15V, L19I, K20R, E35D, M36I, N37D, L63P, H69K, A71V, L89M, I93L | C |
| 3676 | 15.ZA.GT4479 | | LPV | | I54V, V82A | | L10V, T12S, I15V, L19I, E35D, M36I, P39Q, R41K, D60E, Q61E, L63P, H69K, A71V, I93L | C |
| 1054 | 14.ZA.GT3463 | KX544322 | LPV | | I54V, V82A, I84IV | L10F | T12S, I15V, L19I, K20R, M36I, R41K, D60E, L63P, H69K, A71V, L89IM, I93L | C |