| Author (yr) |
Patient |
Isolate |
Acc# |
PIs |
Wks | PIMajorDRMs |
PIMinorDRMs |
OtherMut | Subtype |
| Novitsky (1999) | 96BW17 | 96BW17 | | None | | | | P1L, T12S, I15V, L19I, K20R, E35D, M36I, R41K, L63V, H69K, L89M, I93L | C |
| | 96BW12_10 | 96BW12_10 | AF110972 | None | | | | T12S, I15V, L19I, E35D, M36I, R41K, L63V, H69K, T74S, L89M, I93L | C |
| Shafer (1999) | Z1226 | Z1226 | AF083262 | None | | | | T12S, I15V, L19I, M36I, R41K, L63V, H69K, L89M, I93L | C |
| | Z1875 | Z1875 | AF083257 | None | | | | T12S, I15V, L19I, M36I, R41K, L63V, H69K, L89M, I93L | C |
| Gonzales (2001) | KA004792 | KA47928393 | AF331693 | None | | | | I15V, M36I, N37K, R41N, L63V, H69K, T74S, L89M, I93L | C |
| | CA5625 | CA13968 | AY032091 | None | | | | T12S, I13V, K14T, I15V, L19V, K20R, M36I, N37NS, R41K, L63V, H69K, I72V, V82I, L89M, I93L | C |
| Hoelscher (2001) | 97TZ06 | 97TZ06 | AF361876 | None | | | | T12S, I15V, G16E, L19I, K20M, E35D, M36I, R41K, L63V, H69K, T74S, V77I, L89M, I93L | C |
| Gibb (2002) | DMG101 | 101_w0 | | None | | | | T12S, I15V, L19I, M36I, R41K, L63V, H69K, T74S, L89M, I93L | C |
| | DMG108 | 108_w-7 | | None | | | | I15V, L19I, M36I, R41K, L63V, H69K, L89M, I93L | C |
| | DMG34 | 34_w-1 | | None | | | | T12S, I15V, L19I, R41K, L63V, H69K, T74S, V77I, L89M, I93IL | C |
| Handema (2002) | H00ZM4719 | H00ZM4719 | AB081163 | None | | | | T12S, I15V, L19I, M36I, R41K, L63V, H69K, T74S, L89M, I93L | C |
| Novitsky (2002) | 00BW3842 | 00BW3842 | AF443109 | None | | | | I15V, L19I, L38M, R41K, L63V, H69K, V77I, L89M, I93L | C |
| | 00BW2127 | 00BW2127 | AF443105 | None | | | | T12S, I15V, L19I, M36I, R41K, I62V, L63V, H69K, A71T, I85V, I93L | C |
| | 00BW1471 | 00BW1471 | AF443091 | None | | | | T12S, I15V, L19I, E35D, M36I, R41K, L63V, H69K, T74S, L89M, I93L | C |
| Brindeiro (2003) | BRP2140 | BRP2140 | AY213439 | None | | | | I15V, L19I, M36I, N37K, R41N, L63V, H69K, L89M, I93L | C |
| | BRP2158 | BRP2158 | AY213469 | None | | | | I15V, M36I, N37K, R41N, D60E, L63V, H69K, L89M, I93L | C |
| | BRP2156 | BRP2156 | AY213467 | None | | | | K14R, I15V, E35D, M36I, R41K, R57K, Q61N, L63V, V77I, L89M | C |
| | BRC1563 | BRC1563 | AY213550 | None | | | | L10V, I13V, K14R, I15V, K20R, M36I, N37K, R41I, L63V, I64V, H69K, I93L | C |
| Gordon (2003) | ZA071p02 | ZA071p02 | AY137000 | None | | | | K14S, I15V, L19I, M36I, N37A, L63V, H69K, L89M, I93L | C |
| | ZA043p01 | ZA043p01 | AY136996 | None | | | | T12S, I15V, L19V, K20R, E35D, M36I, R41K, L63V, H69K, T74S, L89M, I93L | C |
| | ZA035p01 | ZA035p01 | AY136988 | None | | | | T12S, I15V, L19V, E35D, M36I, R41K, R57K, L63V, H69K, V82I, L89M, I93L | C |
| | ZA027p01 | ZA027p01 | AY136980 | None | | | | T12S, I15V, L19V, E35D, M36I, R41K, L63V, H69Q, L89M | C |
| | ZA048p01 | ZA048p01 | AY196499 | None | | | | I15V, L19V, E35D, M36I, R41K, L63V, H69K, L89M, I93L | C |
| Jorgensen (2003) | JLB_Pat91 | HIM419517 | AJ419517 | None | | | | T12S, L19IV, K20R, M36I, R41K, L63V, H69K, T74S, L89M, I93L | C |
| Pollakis (2003) | 16 | AA97202GP | AY242574 | None | | | | I3L, L5R, T12S, I15V, L19I, M36I, R41K, L63V, H69K, I93L | C |
| | 6 | AS88651GP | AY242592 | None | | | | I15V, M36I, P39S, R41K, L63V, H69K, L89M, I93L | C |
| Soares (2003) | BRP2089 | BRP2089 | AF527305 | None | | | | L10V, I15V, M36T, N37K, R41N, L63V, H69K, L89M, N98K | C |
| Vergne (2003) | VL99SN86hpd | 99SN86 | AJ583739 | None | | | | T12S, K14R, I15V, L19V, K20R, M36I, R41K, L63V, H69K, L89M | C |
| Weber (2003) | 85H | 610185H-0 | AY140820 | None | | | | T12S, I15V, L19I, E35D, M36I, R41K, L63V, H69K, T74S, V77I, L89M, I93L | C |
| Arroyo (2004) | 01TZA125 | 01TZA125 | AY253304 | None | | | | T12S, I15V, L19I, M36I, R41K, L63V, H69K, T74S, L89M, I93L | C |
| | 01TZA247 | 01TZA247 | AY253309 | None | | | | T12S, I15V, L19I, M36I, R41K, L63V, H69K, T74S, L89M, I93L | C |
| | 01TZBD39_8 | 01TZB39_8 | AY253313 | None | | | | T12S, I15V, L19V, E35D, M36I, R41K, L63V, H69K, T74S, L89M, I93L | C |
| Carrion (2004) | TRA3011 | TRA3011 | AY563169 | None | | | | N37K, R41N, L63V, H69K, T74S, V77I, L89M, I93L | C |
| | ARG4006 | ARG4006 | AY563170 | None | | | | I15V, N37K, R41N, L63V, I64M, H69K, L89M, I93L | C |
| Grossman (2004) | 17747Pr116 | 17747Pr116 | AY529624 | None | | | | L19I, M36I, R41K, L63V, H69K, L89M, I93L | C |
| Gulick (2004) | RG132 | RG132w0 | | None | | | | L10IV, T12S, I15V, L19I, M36I, R41K, L63V, H69K, I93L | C |
| Snoeck (2004) | BE32 | BE32 | AY900737 | None | | | | I15V, L19IT, M36L, R41K, L63V, H69K, T74S, L89M, I93L | C |
| | BE49 | BE49 | AY900750 | None | | | | I15V, L19V, M36L, R41K, L63V, H69K, I72V, T74S, L89M, I93L | C |
| | BE66 | BE66 | AY900953 | None | | | | T12S, I15V, L19I, M36I, R41K, L63V, H69K, T74S, L89M, I93L | C |
| | BE67 | BE67 | | None | | | | T12S, I15V, L19I, M36I, R41K, L63V, H69K, T74S, L89M, I93L | C |
| | BE70 | BE70 | AY900956 | None | | | | I13V, I15V, L19I, M36L, N37S, R41K, L63V, H69K, T74S, L89M, I93L | C |
| Arroyo (2005) | CO3710 | CO3710 | AY734553 | None | | | | L19I, M36I, L63V, H69K, T74S, L89M, I93L | C |
| | CO6721 | CO6721 | AY734560 | None | | | | T12S, I15V, L19I, M36I, R41K, L63V, H69K, T74S, L89M, I93L | C |
| Bellocchi (2005) | 147 | MC147 | GU199525 | None | | | V32VG | T12S, I15V, L19V, E35D, M36I, R41K, L63V, H69K, T74S, L89M, I93L | C |
| | 649 | MT000649 | GU199526 | None | | | | T12S, I15V, L19V, E35ED, M36I, R41K, L63V, H69K, T74TS, L89M, I93IL | C |
| | 318 | MT000318 | GU199527 | None | | | | T12S, I15V, Q18QE, K20R, E35D, M36I, R41K, L63V, H69K, L89M, I93L | C |
| | 416 | MT000416 | GU199531 | None | | | | T12S, I15V, G16E, L19I, M36I, R41K, L63V, H69K, L89M, I93L | C |
| | 1320 | MT001320 | GU199558 | None | | | | T12S, K14R, I15V, L19V, M36I, R41K, K45R, L63V, H69K, L89M, I93L | C |
| Bessong (2005) | 01PB21ZA | 01PB21ZA | AY510040 | None | | | | I15V, Q18H, L19I, K20R, E35D, M36I, N37E, L63V, H69K, L89M, I93L | C |
| | 01PB4ZA | 01PB4ZA | AY510034 | None | | | | K14N, I15V, L19T, K20R, E35D, M36I, R41K, L63V, H69K, L89M, I93L | C |
| Bussmann (2005) | 01BW0498S | 01BW0498S | AY829268 | None | | | | I15V, L19I, E35D, M36I, R41K, L63V, H69K, T74S, L89M, I93L | C |
| | 01BW3845N | 01BW3845N | AY829324 | None | | | | T12S, I15V, L19I, M36I, R41K, L63V, H69K, T74S, L89M, I93L | C |
| | 01BW4136N | 01BW4136N | AY829330 | None | | | | T12S, I15V, L19I, N37S, R41K, L63V, H69K, L89M, I93L | C |
| | 01BW2053S | 01BW2053S | AY829285 | None | | | | T12S, K14T, I15V, L19I, K20R, E35D, M36I, R41K, L63V, H69K, T74S, L89M, I93L | C |
| | 01BW378S | 01BW378S | AY829275 | None | | | | T12S, I15V, L19I, E35D, M36I, R41K, L63V, H69K, T74S, L89M, I93L | C |
| Carr (2005) | 01NGPL658 | 01NGPL658 | DQ013277 | None | | | | T12S, I15V, L19I, M36I, N37S, R41K, I62V, L63V, I64M, H69K, T74S, L89M, I93L | C |
| Grossman (2005) | 17747 | 17747PR116 | | None | | | | L19I, M36I, R41K, L63V, H69K, L89M, I93L | C |
| | 21572 | 21572PR317 | | None | | | | G16GR, L19I, M36I, L38LM, R41K, L63V, H69K, L89M, I93L, L97LQ | C |
| | 28517 | 28517PR507 | | None | | | | M36I, R41K, L63V, H69K, L89M, I93L | C |
| Non-B Workgroup (2005) | UK850 | UK850 | AY900784 | None | | | | T12S, I15V, L19I, M36I, R41K, L63V, H69K, L89M, I93L | C |
| | UK996 | UK996 | AY900791 | None | | | | T12S, I15V, L19T, K20R, E35D, M36I, R41K, L63V, H69K, L89M, I93L | C |
| | UK1457 | UK1457 | AY900804 | None | | | | T12S, I15V, L19I, E35D, M36I, R41K, L63V, H69K, T74S, L89M, I93LV | C |
| | UK2048 | UK2048 | AY900836 | None | | | | T12S, I15V, L19I, E35D, M36I, R41K, R57RK, L63V, H69K, T74S, L89M, I93IL | C |
| | UK2033 | UK2033 | AY900842 | None | | | | T12S, I15V, L19I, M36L, R41K, I62V, L63V, H69K, A71T, I93L | C |
| | UK2145 | UK2145 | AY900855 | None | | | | T12TS, I15V, L19V, M36I, R41K, K45KR, L63V, H69K, L89M, I93L | C |
| | BR1024 | BR1024 | AY900915 | None | | | | L10V, I15V, M36T, N37K, R41N, L63V, H69K, L89M, N98K | C |
| | SA86_DR31 | SA86_DR31 | AY901109 | None | | | | T12TS, G16E, L19I, R41K, L63V, H69K, V77I, L89M, I93L | C |
| | UK4495 | UK4495 | AY901207 | None | | | | T12S, I15V, L19I, M36I, R41K, L63V, C67Y, H69K, T74S, L89M, I93L | C |
| | PL38307 | 64461 | | None | | | | T12S, I15V, L19I, M36I, R41K, L63V, H69K, I93L | C |
| Vazquez de Parga (2005) | RU00054 | RU00054 | EU345720 | None | | | | T12S, I15V, L19I, M36L, N37H, R41K, L63V, H69K, L89M, I93L | C |
| Weber (2005) | F95995 | F95995 | AY677443 | None | | | | T12S, I13V, I15V, L19I, M36L, N37S, R41K, L63V, H69K, T74S, L89M, I93L | C |
| | M87306 | M87306 | AY677395 | None | | | | T12S, I15V, L19I, M36I, R41K, L63V, H69K, T74S, V82I, L89M, I93L | C |
| | F66883 | F66883 | AY714415 | None | | | | R8RP, T12S, I15V, Q18QP, L19IT, L24LF, M36I, R41K, L63V, H69K, L89LM, I93L | C |
| Zeh (2005) | 99NG1293 | 99NG1293 | AY103404 | None | | | | T12S, I15V, L19I, M36I, N37T, R41K, L63V, H69K, T74S, L89M, I93L | C |
| Bessong (2006) | POB_01PB36ZA | 01PB36ZA | DQ222255 | None | | | | T12S, I15V, L19M, E35D, M36I, R41K, L63V, H69K, T74S, L89M, I93L | C |
| | POB_02TS23ZA | 02TS23ZA | DQ222271 | None | | | | T12S, I15V, L19V, M36I, R41K, L63V, H69K, K70R, L89M, I93L | C |
| | POB_04J8839ZA | 04J8839ZA | DQ222278 | None | | | | T12S, K14R, I15V, L19I, M36I, R41K, L63V, H69K, L89M, I93L | C |
| Jayaraman (2006) | 2-00-0491 | 2-00-0491 | | None | | | | T12S, I15V, L19I, M36I, R41K, L63V, H69K, T74S, L89M, I93L | C |
| | 2-00-0533 | 2-00-0533 | | None | | | | T12S, I13V, I15V, L19I, M36I, R41K, L63V, I64M, H69K, L89M, I93L | C |
| Parreira (2006) | PG77 | PG77 | AM071425 | None | | | | T12S, I15V, L19V, M36I, R41K, L63V, H69K, L89M, I93L | C |
| Rodrigues (2006) | BR04RS148 | BR04RS148 | DQ070543 | None | | | | I15V, L19T, M36I, N37K, R41N, L63V, H69K | C |
| | BR04RS191 | BR04RS191 | DQ070557 | None | | | | I15V, M36I, N37K, R41N, L63V, I64L, H69K, V82I, L89M | C |
| Rousseau (2006) | Pt2 | 02PS005MB1 | DQ351235 | None | | | | I15V, L19I, M36I, R41K, L63V, H69K, L89M, I93L | C |
| | Pt36 | 03PS066MB2 | DQ396375 | None | | | | T12S, I15V, L19V, M36I, R41K, L63V, H69K, L89M, I93L | C |
| | Pt48 | 03PS089MB1 | DQ351216 | None | | | | T12S, I15V, L19V, E35D, M36I, R41K, L63V, H69K, L89M, I93L | C |
| | Pt53 | 03PS099MB1 | DQ275655 | None | | | | T12S, I15V, G16E, L19I, M36I, L63V, H69K, I93L | C |
| | Pt54 | 03PS103MB2 | DQ275656 | None | | | | T12S, K14R, I15V, L19I, K20R, M36I, R41K, D60N, I62V, L63V, H69K, T74S, L89M, I93L | C |
| | Pt60 | 03PS113MB2 | DQ396365 | None | | | | T12S, I13V, I15V, L19I, E35D, M36I, R41K, R57K, L63V, H69K, T74S, L89M, I93L | C |
| | Pt73 | 03PS136MB1 | DQ351231 | None | | | | L19V, M36T, R41K, L63V, I64L, H69K, L89M, I93L | C |
| | Pt89 | 03SK029B2 | AY772691 | None | | | | L10M, I13V, K14R, L19I, M36I, R41K, I62V, L63V, H69K, T74A, L89M, I93L | C |
| | Pt123 | 03SK111B1 | DQ056404 | None | | | | T12S, I15V, L19V, M36I, N37S, R41K, L63V, H69K, L89M, I93L | C |
| | Pt151 | 04PS190B1 | DQ093602 | None | | | | T12S, I15V, Q18E, L19I, K20R, E35D, M36I, R41K, L63V, H69K, I93L | C |
| | Pt156 | 04PS198MB1 | DQ445637 | None | | | | T12S, I15V, L19I, K20R, E35D, M36I, R41K, L63V, H69K, L89M, I93L | C |
| | Pt162 | 04PS206B1 | DQ164126 | None | | | | T12S, I15V, L19I, M36I, R41K, K43R, L63V, H69K, T74S, L89M, I93L | C |
| | Pt165 | 04PS214B1 | DQ093588 | None | | | | T12S, I15V, L19I, M36I, R41K, L63V, H69K, L89M, I93L | C |
| | Pt197 | 04SK167B1 | DQ164127 | None | | | | T12S, I15V, L19V, K20R, E35D, M36I, R41K, P44X, L63V, H69K, T74S, L89M, I93L | C |
| | Pt200 | 04SK170B1 | DQ093595 | None | | | | I3V, T12S, I15V, L19I, E35D, M36I, R41K, L63V, H69K, T74S, L89M, I93L | C |
| | Pt214 | 04SK191B1 | DQ369993 | None | | | | I13V, K14N, L19I, M36I, L63V, H69K, T74S, L89M, I93L, C95R | C |
| | Pt232 | 1119MB | AY463229 | None | | | | T12S, I15V, L19V, M36I, R41K, L63V, H69K, T74S, L89M, I93L | C |
| | Pt239 | 1171MB | AY463232 | None | | | | T12S, I15V, G16E, L19I, E35D, M36I, R41K, L63V, H69K, T74S, L89M, I93L | C |
| | Pt249 | 1217MB | AY463226 | None | | | | T12A, I15V, L19T, K20R, E35D, M36I, R41K, L63V, H69K, L89M, I93L | C |
| Santos (2006) | 127PR | 127PR | AY275780 | None | | | | T12S, I15V, K20R, M36I, N37K, R41N, I62V, L63V, H69K, L89I, I93L | C |
| | PA246 | PA246 | DQ344000 | None | | | | G16E, M36I, N37K, R41K, L63V, H69K, L89M, I93L | C |
| Vidal (2006) | NV_LBTB046 | 02.LBTB046 | AM041004 | None | | | | I13V, K14R, I15V, K20R, M36I, R41K, L63V, H69K, L89M, I93L | C |
| Zarandia (2006) | 03GEMZ033 | 03GEMZ033 | DQ205288 | None | | | | T12S, I15V, L19I, M36I, N37S, R41K, L63V, H69K, T74S, L89M, I93L | C |
| | 98GEMZ004 | 98GEMZ004 | DQ207941 | None | | | | T12S, I15V, L19I, M36I, N37S, R41K, L63V, H69K, T74S, L89M, I93L | C |
| Baker (2007) | 6148NJ | 03-6148NJ | AY803477 | None | | | | T12S, I15V, G16GE, L19LI, E35D, M36I, L63V, H69K, L89M, I93L | C |
| Derache (2007) | 1212 | 1212 | EF064480 | None | | | | T12S, I15V, L19I, K20R, E35D, M36I, R41K, L63V, H69K, T74S, L89M, I93L | C |
| Kassu (2007) | ETH-G-031 | G-031 | AB285765 | None | | | | T12P, K14R, I15V, G16E, M36I, R41K, L63V, H69K, V82I, I93L | C |
| | ETH-G-242 | G-242 | AB285837 | None | | | | T12S, I15V, L19I, M36I, R41K, D60E, Q61E, L63V, H69K, L89M, I93L | C |
| Martinson (2007) | KEH44B | KEH44B | EU152414 | None | | | | I15V, L19T, M36I, R41K, L63V, H69K, V82VI, I93L | C |
| | KEH210M | KEH210M | EU152429 | None | | | | T12S, K14R, I15V, L19I, K20R, D25DG, E35D, M36I, R41K, K45R, L63V, H69K, A71P, L89M, I93L | C |
| | KEH210B | KEH210B | EU152430 | None | | | | T12S, K14R, I15V, L19I, K20R, E35D, M36I, R41K, K45R, L63V, H69K, L89M, I93L | C |
| | KEH32M | KEH32M | EU152449 | None | | | | T12S, I15V, L19I, M36I, R41K, L63V, H69K, I93L | C |
| | KEH32B | KEH32B | EU152450 | None | | | | T12S, I15V, L19I, M36I, R41K, L63V, H69K, I93L | C |
| | KEH79B | KEH79B | EU152451 | None | | | | T12S, I15V, L19I, M36I, R41K, L63V, H69K, T74S, L89M, I93L | C |
| | KEH79M | KEH79M | EU152452 | None | | | | T12S, I15V, L19I, M36I, R41K, L63V, H69K, T74S, L89M, I93L | C |
| | KEH142B | KEH142B | EU152468 | None | | | | T12S, L19I, M36I, L63V, H69K, T74S, L89M, I93L | C |
| | CHB200M | CHB200M | EU152469 | None | | | | T12S, I15IV, L19I, K20R, M36I, R41K, L63V, H69K, T74S, L89M, I93L | C |
| | CHB200B | CHB200B | EU152470 | None | | | | T12S, L19I, K20R, M36I, R41K, L63V, H69K, T74S, L89M, I93L | C |
| Novitsky (2007) | 1898 | 1898_1854 | EF026227 | None | | | | T12S, I15V, L19I, M36I, R41K, I62V, L63V, H69K, A71T, L89M, I93L | C |
| | | 1898_4401 | EF026226 | None | | | | L10I, T12S, I13V, I15V, L19I, M36I, R41K, I62V, L63V, H69K, A71T, L89M, I93L | C |
| Razafindratsimandresy (2007) | 10 | 10HIV-SEY | EF143502 | None | | | | T12A, I15V, L19I, K20R, E35D, M36I, R41K, L63V, H69K, T74S, L89M, I93L | C |
| | 30 | 30HIV-SEY | EF143521 | None | | | | I15V, L19I, M36I, R41K, L63V, H69K, L89M, I93L | C |
| Sen (2007) | PtID-NPT91 | PtID-NPT91 | DQ826663 | None | | | | T4S, Q7E, T12S, I15V, L19I, M36I, R41K, Q61H, L63V, I64M, H69K, I72T, L89M, G94R | C |
| Vidal (2007) | U2202 | 02BU.U2202 | AM260238 | None | | | | T12S, I15V, L19V, K20R, E35D, M36I, R41K, L63V, H69K, I72IM, T74S, L89M, I93L | C |
| | U2702 | 02BU.U2702 | AM260248 | None | | | | T12S, K14R, I15V, M36I, N37K, R41N, L63V, H69K, L89M, I93L | C |
| | B1051 | 02BU.B1051 | AM260263 | None | | | | T12P, K14R, I15V, G16E, M36I, N37K, R41N, L63V, H69K, I93L | C |
| | B1085 | 02BU.B1085 | AM260268 | None | | | | I15V, M36I, N37K, R41N, Q61N, L63V, H69K, V82I, L89M, I93L | C |
| | SF621 | 02BU.SF621 | AM260277 | None | | | | T12S, I15V, L19V, M36I, N37K, R41N, L63V, H69K, L89M, I93L | C |
| | U1101 | 02BU.U1101 | AM260304 | None | | | | T12S, I15V, L19I, K20R, M36I, N37K, R41N, L63V, H69K, K70T, L89M, I93L | C |
| Deho (2008) | 3 | 3 | EU244668 | None | | | | T12S, I15V, L19I, E35D, M36I, R41K, L63V, H69K, T74S, L89M, I93L | C |
| | 136 | 136 | EU244682 | None | | | | I15V, L19I, M36I, R41K, L63V, H69K, V82I, I93L | C |
| | 121 | 121 | EU244683 | None | | | | T12S, I15V, L19I, M36I, R41K, L63V, H69K, K70R, V82I, L89M, I93L | C |
| | 193 | 193 | EU244693 | None | | | | T12S, I15V, L19I, E35D, M36I, R41K, L63V, I64M, H69K, L89M, I93L | C |
| Ferreira (2008) | 40 | BR06PR40 | EU340727 | None | | | | I15V, M36I, N37K, R41N, L63V, H69K, I93L | C |
| Ibe (2008) | 126 | 126 | AB356180 | None | | | | I15V, L19I, M36I, R41K, L63V, H69K, T74S, L89M, I93L | C |
| Jacobs (2008) | 1668 | 1668 | EF602183 | None | | | | T12A, I15V, L19I, M36I, R41K, L63V, H69K, I93L | C |
| | 1775 | 1775 | EF602215 | None | | | | T12S, I13V, I15V, L19I, M36I, N37S, R41K, L63V, I64M, H69K, T74S, L89M, I93L | C |
| | 1409 | 1409 | EF602253 | None | | | | T12S, I15V, L19I, M36I, R41K, L63V, H69K, T74S, L89M, I93L | C |
| | 1529B | 1529B | EF602255 | None | | | | T12S, I15V, L19I, E35D, M36I, R41K, Q61E, L63V, H69K, T74S, L89M, I93L | C |
| | 1690 | 1690 | EF602285 | None | | | | T12S, I15V, L19T, K20R, E35D, M36I, R41K, L63V, H69K, T74S, L89M, I93L | C |
| Kamoto (2008) | MW33 | MW33 | JQ617150 | None | | | | I15V, L19I, K20R, M36I, R41K, L63V, H69K, L89M, I93L | C |
| | MW3 | MW3 | JQ617177 | None | | | | I15V, L19T, R41K, D60E, L63V, H69K, V77I, L89M, I93L | C |
| Lahuerta (2008) | P348416 | p348416_04 | EF407704 | None | | | | T12S, I15V, L19T, K20R, E35D, M36I, R41K, L63V, H69K, L89M, I93L | C |
| | P64683 | P64683_99 | EF407738 | None | | | | T12S, L19T, K20R, E35D, M36I, R41K, L63V, H69K, L89M, I93L | C |
| Marconi (2008) | ICH07 | ICH07 | EU308000 | None | | | | T12S, I15V, Q18Y, L19I, K20R, M36I, R41K, L63V, H69K, L89M, I93L | C |
| | ICH28 | ICH028 | EU308018 | None | | | | T12S, I13V, I15V, L19I, M36I, N37S, R41K, L63V, H69K, T74S, L89M, I93L | C |
| Matthews (2008) | 1043C | 1043C | FJ199532 | None | | | | I15V, L19I, E35D, M36I, R41K, L63V, H69K, T74S, L89M, I93L | C |
| | 1043M | 1043M | FJ199533 | None | | | | T12A, I15V, L19I, E35D, M36I, R41K, L63V, H69K, T74S, L89M, I93L | C |
| | 1119 | 1119 | FJ199535 | None | | | | T12S, I15V, L19V, M36I, R41K, L63V, H69K, T74S, L89M, I93L | C |
| | 1171 | 1171 | FJ199543 | None | | | | T12S, I15V, G16E, L19I, E35D, M36I, R41K, L63V, H69K, T74S, L89M, I93L | C |
| | 1200 | 1200 | FJ199553 | None | | | | T12S, I15V, G16E, L19I, N37S, L63V, H69K, T74S, V82I, L89M, I93L | C |
| | 1217 | 1217 | FJ199556 | None | | | | T12A, I15V, L19T, K20R, E35D, M36I, R41K, L63V, H69K, L89M, I93L | C |
| | A774 | A774 | FJ199573 | None | | | | T12S, K14R, I15V, L19I, M36I, R41K, L63V, H69K, L89M, I93L | C |
| | PS040 | PS040 | FJ199621 | None | | | | I15V, L19I, E35D, M36I, R41K, L63V, H69K, T74S, L89M, I93L, F99Y | C |
| | PS041 | PS041 | FJ199622 | None | | | | I15V, L19I, E35D, M36I, R41K, L63V, H69K, T74S, L89M, I93L, F99Y | C |
| | PS066 | PS066 | FJ199647 | None | | | | T12S, I15V, L19V, M36I, R41K, L63V, H69K, L89M, I93L | C |
| | PS089 | PS089 | FJ199664 | None | | | | T12S, I15V, L19V, E35D, M36I, R41K, L63V, H69K, L89M, I93L | C |
| | PS113 | PS113 | FJ199687 | None | | | | T12S, I15V, L19I, E35D, M36I, R41K, R57K, L63V, H69K, T74S, L89M, I93L | C |
| | PS136 | PS136 | FJ199705 | None | | | | L19V, M36T, R41K, L63V, I64L, H69K, L89M, I93L | C |
| | PS182 | PS182 | FJ199741 | None | | | | T12S, I15V, L19V, E35D, M36I, R41K, L63V, H69K, T74S, L89M, I93L | C |
| | PS190 | PS190 | FJ199748 | None | | | | T12S, I15V, Q18E, L19I, K20R, E35D, M36I, R41K, L63V, H69K, I93L | C |
| | PS206 | PS206 | FJ199762 | None | | | | T12S, K14R, I15V, L19I, M36I, R41K, L63V, H69K, T74S, L89M, I93L | C |
| | PS214 | PS214 | FJ199770 | None | | | | T12S, I15V, L19I, M36I, R41K, L63V, H69K, L89M, I93L | C |
| | PS357 | PS357 | FJ199782 | None | | | | T12S, I15V, L19V, K20R, M36I, R41K, I62V, L63V, H69K, L89M, I93L | C |
| | PS396 | PS396 | FJ199803 | None | | | | T12S, I15V, L19V, M36I, N37S, R41K, L63V, H69K, L89M, I93L | C |
| | PS409 | PS409 | FJ199816 | None | | | | T12S, K14R, I15V, L19I, E35D, M36I, R41K, L63V, H69K, T74S, L89M, I93L | C |
| | PS450 | PS450 | FJ199837 | None | | | | T12S, I15V, L19I, K20R, E35D, M36I, R41K, L63V, H69K, L89M, I93L | C |
| | PS455 | PS455 | FJ199839 | None | | | | I15V, L19I, K20R, N37S, R41K, L63V, H69K, V77I, I93L | C |
| | PS457 | PS457 | FJ199841 | None | | | | T12S, I15V, L19I, M36I, R41K, L63V, H69K, T74S, L89M, I93L | C |
| | SK005 | SK005 | FJ199846 | None | | | | T12S, I15V, L19I, M36I, R41K, D60G, L63V, H69K, K70R, L89M, I93L | C |
| | SK029 | SK029 | FJ199858 | None | | | | L10M, I13V, K14R, L19I, M36I, R41K, I62V, L63V, H69K, T74A, L89M, I93L | C |
| | SK111 | SK111 | FJ199898 | None | | | | T12S, I15V, L19V, M36I, N37S, R41K, L63V, H69K, L89M, I93L | C |
| | SK150 | SK150 | FJ199925 | None | | | | T12S, I15V, L19T, M36I, F53S, L63V, H69K, L89M, I93L | C |
| | SK167 | SK167 | FJ199938 | None | | | | T12S, I15V, L19V, K20R, E35D, M36I, R41K, P44X, L63V, H69K, T74S, L89M, I93L | C |
| | SK170 | SK170 | FJ199941 | None | | | | I3V, T12S, I15V, L19I, E35D, M36I, R41K, L63V, H69K, T74S, L89M, I93L | C |
| | SK185 | SK185 | FJ199954 | None | | | | T12S, I15V, L19V, E35D, M36I, R41K, L63V, H69K, T74S, L89M, I93L | C |
| | SK191 | SK191 | FJ199956 | None | | | | I13V, K14N, L19I, M36I, L63V, H69K, T74S, L89M, I93L, C95R | C |
| Nyombi (2008) | TMS214 | TMS214 | EU251849 | None | | | | T12S, I15IV, L19I, M36I, R41K, L63V, H69K, T74S, L89M, I93L | C |
| | TMS216 | TMS216 | EU251851 | None | | | | I15V, L19V, M36I, R41K, L63V, H69K, T74S, L89M, I93L | C |
| | TMS316 | TMS316 | EU251863 | None | | | | T12D, K14R, I15V, G16A, M36I, R41K, L63V, H69K, L89LM, I93L | C |
| | TMS324 | TMS324 | EU251870 | None | | | | T12S, I15V, L19T, M36I, N37K, R41N, L63V, H69K, V82I, L89M, I93L | C |
| Pillay (2008) | DR41 | DR41 | AY589896 | None | | | | L10I, T12S, I15V, M36I, R41K, Q61E, L63V, H69K, L89M, I93L | C |
| | DR31 | 02ZA.DR31 | AY589888 | None | | | | T12TS, G16E, L19I, R41K, L63V, H69K, V77I, L89M, I93L | C |
| | DR98 | 03ZA.DR98 | AY589935 | None | | | | T12S, K14R, L19V, M36I, R41K, L63V, I64L, H69K, L89M, I93L | C |
| Rosen-Zvi (2008) | 71 | 05p71-1 | | None | | | | I15V, Q18E, K20R, E35D, M36I, R41K, D60E, Q61E, I62V, L63V, H69K, T74A, L89M, I93L | C |
| Somi (2008) | KM-05-135 | KM-05-135 | JQ616959 | None | | | | I15V, L19I, E35D, M36I, R41K, L63V, H69K, T74S, L89M, I93L | C |
| Bartolo (2009) | CSE123 | 01AOCSE123 | EU068205 | None | | | | T12P, I15V, G16E, L19I, M36I, N37S, R41K, L63V, H69K, L89M, I93L | C |
| | HAB80 | 01AOHAB80 | EU068214 | None | | | | T12S, I13V, I15V, G16E, L19I, M36I, N37S, R41K, L63V, H69K, L89M, I93L | C |
| | HJM64 | 01AOHJM64 | EU068259 | None | | | | T12S, I13V, I15V, L19I, E35D, M36I, R41K, L63V, H69K, T74S, L89M, I93L | C |
| | SNS55 | 01AOSNS55 | EU068309 | None | | | | T12S, I13V, I15V, L19I, E35D, M36I, R41K, L63V, H69K, T74S, L89M, I93L | C |
| | HM182 | 01AOHM182 | EU068321 | None | | | | T12S, I15V, G16E, L19I, M36I, N37S, R41K, L63V, H69K, L89LM, I93L | C |
| | HM192 | 01AOHM192 | EU068329 | None | | | | T12S, I15V, L19M, N37S, R41K, L63V, H69K, L89M, I93L | C |
| | HM194 | 01AOHM194 | EU068331 | None | | | | T12S, I15V, L19I, M36I, N37S, R41K, L63V, H69K, L89M, I93L | C |
| Cuevas (2009) | X2469_1 | X2469_1 | GU326106 | None | | | | G17GS, L19V, M36I, L63V, H69K, I72V, L89M, I93L | C |
| Hosseinipour (2009) | 8990 | 8990 | GQ228216 | None | | | | K14N, L19T, K20R, M36I, L63V, H69K, L89M, I93L | C |
| | 9308 | 9308 | GQ228224 | None | | | | I15V, L19I, M36I, N37D, R41K, L63V, H69K, L89M, I93L | C |
| | 9402 | 9402 | GQ228241 | None | | | | L10I, T12S, I15V, L19I, M36I, R41K, R57K, Q61E, I62V, L63V, E65D, H69K, T74A, L89M | C |
| | 9443 | 9443 | GQ228248 | None | | | L33LF | I13V, L19T, K20R, M36I, R41K, L63V, H69K, V82VI, L89M, I93L | C |
| | 9326 | 9326 | GQ228256 | None | | | | L10I, K14R, I15V, L19I, M36I, R41K, L63V, H69K, T74A, L76L*, L89M, I93L | C |
| | 9359 | 9359 | GQ228261 | None | | | | I15V, L19T, K20R, M36I, R41K, L63V, H69K, I72IV, T74S, V77I, L89M, I93L | C |
| | 9360 | 9360 | GQ228262 | None | | | | T12AS, I15V, L19LI, K20R, M36I, R41K, L63V, H69K, V77I, L89M, I93L | C |
| | 9373 | 9373 | GQ228265 | None | | | | I15V, G16E, L19I, E35D, N37S, R41K, Q61N, L63V, E65D, H69K, I72V, L89M, I93L | C |
| Kandathil (2009) | VL05_060 | VL05_060 | EU110053 | None | | | | T12S, I15V, L19I, M36I, R41K, L63V, H69K, L89M, I93L | C |
| Rajesh (2009) | N39 | TRCNPR39 | FJ595402 | None | | | | T12S, I15V, L19T, M36I, R41K, L63V, H69K, V82I, L89M, I93L | C |
| Smith (2009) | CR195 | US2006CR195 | | None | | | | L10LI, I13IV, K14KR, I15V, M36I, R41K, L63V, I64V, H69K, I93L | C |
| Vercauteren (2009) | pt2187 | 96234726 | GQ398837 | None | | | | I15V, L19I, M36I, N37D, R41K, D60E, I62V, L63V, H69K, V82I, I93L | C |
| | pt1345 | 5140951757 | GQ399679 | None | | | | I15V, L19I, M36L, N37S, R41K, L63V, H69K, L89M, I93L | C |
| | pt1291 | 5439887893 | GQ399733 | None | | | | I15V, M36I, R41K, L63V, I64M, H69K, L89M, I93L | C |
| | pt980 | 7375057828 | GQ400044 | None | | | | T12S, K14KR, I15V, L19I, E35D, M36I, N37D, R41K, L63V, H69K, T74S, L89M, I93L | C |
| | pt813 | 8312321855 | GQ400211 | None | | | | T12PS, I15V, L19I, M36L, N37S, R41K, L63V, H69K, L89M, I93L | C |
| | pt454 | btQUkeNbwp | GQ400570 | None | | | | T12S, I15V, L19I, E35D, M36I, R41K, I62IV, L63V, H69K, T74S, L89M, I93IL | C |
| | pt432 | Dl4YnFWo7B | GQ400592 | None | | | | T12S, I15V, L19I, E35D, M36I, R41K, L63V, H69K, T74S, L89M, I93L | C |
| | pt405 | fi3YXPit6z | GQ400619 | None | | | | T12S, I15V, L19I, M36I, R41K, L63V, H69K, T74S, L89M, I93L | C |
| Wallis (2009) | GT00361780 | GT00361780 | | None | | | | T12S, I15V, G16E, L19IT, K20R, M36I, P39S, R41K, Q61H, L63V, H69K, L89M, I93L | C |
| | 2367414 | 2367414 | | None | | | | T12S, I15V, L19I, M36I, I62V, L63V, H69K, T74S, V82I, L89M, I93L | C |
| | 2323239 | 2323239 | | None | | | | T12TS, I15V, L19I, M36I, R41K, L63V, H69K, T74S, L89M, I93L | C |
| | TJC2419451 | TJC2419451 | | None | | | | T12S, I15V, L19I, L38M, L63V, H69K, V77I, L89M, I93L | C |
| | TJC2402512 | TJC2402512 | | None | | | V11VI | I15V, L19I, K20R, M36I, R41K, L63V, H69K, L89I, I93L | C |
| | TJC2415406 | TJC2415406 | | None | | | | L10V, I15V, L19I, E35D, M36I, R41K, I62IV, L63V, H69K, T74S, V77I, L89M, I93L | C |
| | GT00240772 | GT00240772 | | None | | | | T12S, I15V, L19I, K20R, E35D, M36I, N37D, L63V, H69K, T74S, L89M, I93L | C |
| | TJC2371553 | TJC2371553 | | None | | | | T12S, I15V, L19I, K20R, M36I, R41K, R57K, L63V, H69K, L89M, I93L | C |
| | 2316796 | 2316796 | | None | | | | I15V, G16E, L19I, M36L, N37S, L63V, H69K, T74S, L89M, I93L | C |
| | GT00013415 | GT00013415 | | None | | | | I15V, K20R, E35D, M36I, R41K, R57RK, L63V, H69K, T74S, L89M, I93L | C |
| | TJC2411484 | TJC2411484 | | None | | | | T12S, I15V, L19I, M36I, R41K, L63V, H69K, T74S, L89M, I93L | C |
| | GT00378583 | GT00378583 | | None | | | | I15IV, G16E, L19T, L63V, H69K, V77I, I93L | C |
| | GT00034325 | GT00034325 | | None | | | | T12S, I15V, L19I, E35D, M36I, N37S, R41K, R57K, L63V, H69K | C |
| | GT00201512 | GT00201512 | | None | | | | L5LF, I15V, L19I, K20R, L23F, M36I, R41K, L63V, I64M, H69K, V77I, V82I, L89M, I93L | C |
| | 2356755 | 2356755 | | None | | | | T12S, I15V, L19I, M36I, I62V, L63V, H69K, T74S, V82I, L89M, I93L | C |
| | 2280415 | 2280415 | | None | | | | T12S, I15V, L19I, K20M, M36I, N37T, L63V, H69K, T74S, L89M, I93L | C |
| Castelbranco (2010) | 090005A | 090005A | HM357726 | None | | | | T12S, I15V, L19I, M36I, R41K, L63V, H69K, T74S, L89M, I93L | C |
| Diop-Ndiaye (2010) | 86HPD | 86HPD | FN599712 | None | | | | T12S, K14R, I15V, L19V, K20R, M36I, R41K, L63V, H69K, L89M | C |
| Djoko (2010) | 621 | CD2463 | FR666621 | None | | | | T12S, L19I, M36I, R41K, L63V, H69K, T74S, L89M, I93L | C |
| El-Khatib (2010) | Pat093 | 11ZA_SAVE1496 | JF960543 | None | | | | T12S, I15V, L19V, E35D, M36I, R41K, L63V, H69K, T74S, V82I, L89M, I93L | C |
| Gonzalez (2010) | 342 | 342_M00m | GQ427123 | None | | | | T12S, I15V, L19I, M36I, R41K, L63V, H69K, T74S, V75I, L89M, I93L | C |
| | 1925 | 1925_M00m | GQ427125 | None | | | | T12S, I15V, L19I, M36I, N37S, R41K, L63V, H69K, L89M, I93L | C |
| | CH10 | CH10 | GQ433806 | None | | | | I15V, M36I, R41K, L63V, H69K, T74S, L89M, I93L | C |
| | CP1 | CP1 | GQ433807 | None | | | | T12S, I15V, L19I, E35D, M36I, R41K, L63V, H69K, T74S, L89M, I93L | C |
| | KA2 | KA2 | GQ433813 | None | | | | I15V, L19I, M36I, R41K, L63V, H69K, T74S, L89M, I93L | C |
| | KP3 | KP3 | GQ433827 | None | | | D30E | G16E, L19I, M36I, L63V, H69K, V77I, L89M, I93L | C |
| | KT10 | KT10 | GQ433836 | None | | | | T12S, I15V, L19I, M36I, R41K, L63V, H69K, T74A, L89M, I93L | C |
| | MO_4 | MO_4 | GQ433874 | None | | | | T12S, I15V, L19I, M36I, R41K, L63V, H69K, T74S, L89M, I93L | C |
| | MO8 | MO8 | GQ433878 | None | | | | T12S, I15V, L19I, M36I, N37S, R41K, L63V, H69K, L89M, I93L | C |
| | SO_4 | SO_4 | GQ433889 | None | | | | T12S, K14R, I15V, L19I, M36I, R41K, L63V, H69K, L89M, I93L | C |
| | SO_8 | SO_8 | GQ433892 | None | | | | K14R, I15V, M36I, R41K, L63V, H69K, T74S, L89M, I93L | C |
| | 575_M00m | 575_M00m | GQ427112 | None | | | | T12S, I15V, L19I, M36I, R41K, L63V, H69K, T74S, L89M, I93L | C |
| | 1302_M00m | 1302_M00m | GQ427118 | None | | | | I15V, L19T, M36I, R41K, L63V, H69K, T74S, L89M, I93L | C |
| | CP5 | CP5 | GQ433808 | None | | | | I15V, L19I, M36I, N37D, R41K, L63V, H69K, T74S, G86E, L89M, I93L | C |
| | KLesa9 | KLesa9 | GQ433825 | None | | | | T12S, I15V, L19I, M36I, R41K, L63V, H69K, T74S, L89M, I93L | C |
| | LUC9 | LUC9 | GQ433850 | None | | | | T12S, I15V, L19T, M36I, R41K, L63V, H69K, T74S, L89M, I93L | C |
| | LUK7 | LUK7 | GQ433855 | None | | | | T12S, I15V, L19I, M36I, R41K, L63V, H69K, T74S, L89M, I93L | C |
| | MA6 | MA6 | GQ433867 | None | | | | T12S, I15V, L19T, E35D, M36I, R41K, D60E, Q61E, L63V, H69K, L89M, I93L | C |
| | MO_1 | MO_1 | GQ433872 | None | | | | T12A, I15V, L19I, K20M, E35N, M36I, N37D, R41K, L63V, H69K, T74S, L89M | C |
| | ND_6 | ND_6 | GQ433884 | None | | | | T12S, I15V, L19I, E35D, M36I, R41K, L63V, H69K, T74S, L89M, I93L | C |
| Hamers (2010) | 300006 | CP076300006 | HM119606 | None | | | | T12S, I15V, L19I, E35D, M36L, N37S, R41K, I62V, L63V, H69K, T74S, V82VI, L89M | C |
| | 300010 | CP076300010 | HM119610 | None | | | | T12S, I15V, L19I, E35D, M36I, R41K, L63V, H69K, T74S, L89M, I93L | C |
| | 300034 | CP076300034 | HM119628 | None | | | | T12S, I15V, Q18E, L19I, E35D, M36L, P39PT, R41K, I62V, L63V, H69K, T74S, L89M | C |
| | 300038 | CP076300038 | HM119632 | None | | | | L10V, I15V, L19I, E35D, M36I, R41K, K45KR, L63V, H69K, T74S, L89M, I93L | C |
| | 300041 | CP076300041 | HM119635 | None | | | | T12S, I15V, L19I, E35D, M36I, N37E, R41K, L63V, H69K, T74S, L89LM, I93L | C |
| | 300052 | CP076300052 | HM119643 | None | | | | I15V, M36I, R41K, L63V, H69K, T74S, L89M, I93L | C |
| | 300058 | CP076300058 | HM119647 | None | | | | T12S, I15V, L19I, M36I, R41K, L63V, H69K, T74S, L89M, I93IL | C |
| | 300067 | CP076300067 | HM119655 | None | | | | T12S, I15V, L19I, M36I, N37D, R41K, L63V, H69K, T74S, V82I, L89M, I93L | C |
| | 300068 | CP076300068 | HM119656 | None | | | | T12X, I15V, L19I, M36IL, R41K, L63V, H69K, T74TS, L89M, I93L | C |
| | 300103 | CP076300103 | HM119681 | None | | | | T12S, K14R, I15V, L19I, M36I, R41K, L63V, I64IM, H69K, T74TA, L89M, I93L | C |
| | 300105 | CP076300105 | HM119683 | None | | | | M36I, R41K, L63V, H69K, I72V, T74S, L89M, I93L | C |
| | 300109 | CP076300109 | HM119687 | None | | | | T12S, L19I, M36I, R41K, L63V, H69K, T74S, L89M, I93L | C |
| | 300143 | CP076300143 | HM119719 | None | | | | E35D, M36I, R41K, L63V, H69K, V82I, L89M, I93L | C |
| | 300154 | CP076300154 | HM119729 | None | | | | T12S, K14E, I15V, L19K, K20R, M36I, R41K, I62IV, L63V, E65EK, G68GE, H69K, I72IM, V82I, L89M, I93L | C |
| | 300163 | CP076300163 | HM119738 | None | | | | T12S, I15V, L19T, K20R, E35D, M36I, R41K, L63V, I64IM, H69K, T74S, L89M, I93L | C |
| | 300174 | CP076300174 | HM119747 | None | | | | I15V, L19I, K20R, M36I, N37S, R41K, L63V, H69K, V77I, L89M, I93L | C |
| | 300176 | CP076300176 | HM119749 | None | | | | I15V, M36I, R41K, L63V, H69K, T74S, L89M, I93L | C |
| | 300177 | CP076300177 | HM119750 | None | | | | I15V, L19I, M36I, R41K, L63V, H69K, I93L | C |
| | 300202 | CP076300202 | HM119772 | None | | | | I15V, L19I, M36I, R41K, L63V, H69K, T74S, V75I, L89M, I93L | C |
| | 300214 | CP076300214 | HM119782 | None | | | | T12S, Q18E, L19T, K20R, M36I, R41K, L63V, H69K, L89M, I93L | C |
| | 300216 | CP076300216 | HM119784 | None | | | | T12S, I15V, L19I, K20R, M36I, N37D, R41K, L63V, H69K, L89M, I93L | C |
| | 300235 | CP076300235 | HM119799 | None | | | | T12S, I15V, L19IT, M36I, R41K, L63V, H69K, L89M, I93L | C |
| | 300257 | CP076300257 | HM119807 | None | | | | T12S, I15V, L19I, M36I, R41K, L63V, H69K, T74S, L89M, I93L | C |
| | 300401 | CP076300401 | HM119828 | None | | | | I15V, M36I, R41K, L63V, I64M, H69K, L89M, I93L | C |
| | 300402 | CP076300402 | HM119829 | None | | | | T12S, L19I, K20R, M36I, R41K, L63V, H69K, I93L | C |
| | 300403 | CP076300403 | HM119830 | None | | | | I15V, L19I, E35D, M36I, R41K, L63V, H69K, T74S, L89M, I93L | C |
| | 300436 | CP076300436 | HM119858 | None | | | | T12S, I15V, L19I, K20R, E35D, M36I, N37E, R41K, L63V, H69K, T74S, L89M, I93L | C |
| | 300442 | CP076300442 | HM119864 | None | | | | T12S, I13V, I15V, L19I, M36I, R41K, L63V, H69K, T74S, L89M, I93L | C |
| | 300446 | CP076300446 | HM119867 | None | | | | T12S, I15V, L19I, M36I, R41K, L63V, E65K, H69K, V82I, L89M, I93L, L97V | C |
| | 300453 | CP076300453 | HM119874 | None | | | | T12TS, I15IV, L19I, M36I, R41K, R57RK, I62IV, L63V, H69K, T74S, V77VI, L89M, I93L | C |
| | 300462 | CP076300462 | HM119883 | None | | | | L10I, I15V, M36I, R41K, L63V, C67S, H69K, L89M, I93L | C |
| | 300466 | CP076300466 | HM119887 | None | | | | T12S, I15V, L19I, M36I, N37NS, R41K, L63V, H69K, K70KR, L89M, I93L | C |
| | 300481 | CP076300481 | HM119900 | None | | | | W6R, T12S, I13V, I15L, L19I, E35D, M36L, N37K, L63V, H69K, T74S, L89M, I93L | C |
| | 300482 | CP076300482 | HM119901 | None | | | | T12S, I15V, L19IR, K20M, M36I, R41K, L63V, H69K, L89M, I93L | C |
| | 300483 | CP076300483 | HM119902 | None | | | | T12S, I15V, L19I, M36I, R41K, L63V, H69K, T74S, L89M, I93L | C |
| | 300498 | CP076300498 | HM119917 | None | | | | T12S, I13V, I15V, L19I, K20R, M36I, R41K, L63V, H69K, I72IV, L89M, I93L | C |
| | 300505 | CP076300505 | HM119922 | None | | | | L10LV, T12S, I15V, L19I, E35D, M36I, R41K, L63V, H69K, T74S, V77VI, L89M, I93L | C |
| | 300506 | CP076300506 | HM119923 | None | | | | T12S, K14R, I15V, L19T, M36I, R41K, D60E, L63V, H69K, L89M, I93L | C |
| | 300511 | CP076300511 | HM119928 | None | | | | G16E, L19I, K20R, M36I, P39S, R41K, L63V, H69K, I72IV, T74S, L89M, I93L | C |
| | 300527 | CP076300527 | HM119943 | None | | | | T12S, I15V, L19IV, M36I, R41K, L63V, H69K, T74S, L89M, I93L | C |
| | 300536 | CP076300536 | HM119951 | None | | | | T12S, L19I, M36I, R41K, L63V, H69K, T74S, L89M, I93L | C |
| | 300555 | CP076300555 | HM119965 | None | | | | T12S, I15V, L19I, E35ED, M36I, R41K, K45KR, L63V, H69K, T74S, L89M, I93L | C |
| | 300567 | CP076300567 | HM119974 | None | | | | T12S, I15V, L19I, E35D, M36I, R41K, K45R, L63V, H69K, T74S, V82I, L89M, I93L | C |
| | 300580 | CP076300580 | HM119983 | None | | | | T12S, I15V, L19I, E35D, M36I, R41K, L63V, H69K, T74S, L89M, I93L | C |
| | 300581 | CP076300581 | HM119984 | None | | | | T12S, I15V, L19I, E35D, M36I, N37E, R41K, L63V, H69K, T74S, L89M, I93L | C |
| | 300591 | CP076300591 | HM119992 | None | | | | I15V, M36I, R41K, L63V, H69K, T74S, L89M, I93L | C |
| | 300615 | CP076300615 | HM120015 | None | | | | T12S, I15V, L19I, M36L, N37S, R41RK, L63V, H69K, T74S, L89M, I93L | C |
| | 300616 | CP076300616 | HM120016 | None | | | | I15V, L19I, E35D, M36IL, R41K, R57RK, D60DE, L63V, C67CG, H69K, V82I, L89M, I93L | C |
| | 300637 | CP076300637 | HM120034 | None | | | | T12S, I15V, L19I, E35D, M36I, R41K, L63V, H69K, T74S, L89M, I93L | C |
| | 300643 | CP076300643 | HM120039 | None | | | | I15V, L19I, M36L, N37S, L63V, H69K, T74S, L89M, I93L | C |
| | 300646 | CP076300646 | HM120042 | None | | | | T12S, I15V, L19I, K20R, E35D, M36I, R41K, L63V, H69K, T74S, L89M, I93L | C |
| | 300652 | CP076300652 | HM120046 | None | | | | T12S, I15V, L19I, M36I, R41K, K45KR, L63V, H69K, I72V, T74S, L89M, I93L | C |
| | 300677 | CP076300677 | HM120066 | None | | | | T12S, I15V, L19I, E35D, M36I, R41K, L63V, H69K, T74S, L89M, I93L | C |
| | 302365 | CP076302365 | HM120089 | None | | | | T12S, I15V, L19I, E35D, M36I, R41K, L63V, I64L, H69K, L89M, I93L | C |
| | 302381 | CP076302381 | HM120095 | None | | | | T12S, I15V, L19I, M36I, R41K, R57RK, I62V, L63V, H69K, A71T, I72IEKV, I93L | C |
| | 302382 | CP076302382 | HM120096 | None | | | | T12TS, I15V, L19I, M36I, R41K, K43KR, K45KR, L63V, H69K, T74S, L89M, I93L | C |
| | 302395 | CP076302395 | HM120103 | None | | | | T12S, I15V, L19T, K20M, M36I, R41K, L63V, H69K, T74S, L89M, I93L | C |
| | 302443 | CP076302443 | HM120128 | None | | | | I15V, L19LI, E35D, M36I, R41K, L63V, I64M, H69K, L89M, I93L | C |
| | 302446 | CP076302446 | HM120130 | None | | | | I15V, M36I, N37D, R41K, L63V, H69K, T74S, L89M, I93L | C |
| | 302495 | CP076302495 | HM120143 | None | | | | T12S, I15V, L19I, E35D, M36MI, N37NS, R41K, L63V, H69K, T74S, V77I, L89M, I93L | C |
| | 302512 | CP076302512 | HM120144 | None | | | | T12S, I15V, G16E, L19I, M36I, R41K, L63V, H69K, L89M, I93L | C |
| Ndembi (2010) | 15213D_P1 | 15213 | GQ409573 | None | | | | I15V, L19I, M36I, N37K, R41S, L63V, H69K, L89M | C |
| Papathanasopoulos (2010) | 17699 | 07ZA17699 | GU253425 | None | | | | T12S, I15V, L19I, K20R, E35D, M36I, R41K, D60E, L63V, H69K, T74S, L89M, I93L | C |
| | 17872 | 07ZA17872 | GU253399 | None | | | | T12S, I15V, G16E, L19I, E35ED, N37S, R41RK, I62IV, L63V, H69K, T74S, L89M, I93L | C |
| | 17058 | 06ZA17058 | GU253417 | None | | | | K14R, I15V, L19V, E35D, M36I, R41K, L63V, H69K, L89M, I93L | C |
| | 16938 | 06ZA16938 | GU253400 | None | | | | I15V, L19I, E35D, M36I, R41K, L63V, H69K, T74S, L89M, I93L | C |
| Rodrigues (2010) | 351_07 | BR07SC351 | GQ401331 | None | | | | I13V, I15V, K20R, M36I, N37K, R41N, I62V, L63V, H69K, T74S, L89M, I93L | C |
| Tymchuck (2010) | MW14 | MW14 | HM744723 | None | | | | I15V, G16E, L19I, M36I, R41K, I62V, L63V, H69K, T74S, L89M, I93L | C |
| Wright (2010) | 126 | SK126 | HM593133 | None | | | | T12S, I15V, L19V, M36I, R41K, L63V, H69K, L89M, I93L | C |
| | 150 | SK150 | HM593159 | None | | | | T12S, I15V, L19T, M36I, R41K, L63V, H69K, L89M, I93L | C |
| | 170 | SK170 | HM593178 | None | | | | T12S, I15V, L19I, E35D, M36I, R41K, L63V, H69K, T74S, L89M, I93L | C |
| | 185 | SK185 | HM593192 | None | | | | T12S, I15V, L19V, E35D, M36I, R41K, L63V, H69K, T74S, L89M, I93L | C |
| | 191 | SK191 | HM593198 | None | | | | I13IV, K14N, L19I, M36I, R41RK, L63V, H69K, T74S, L89M, I93L | C |
| | 231 | SK231 | HM593238 | None | | | | T12S, I15V, L19I, K20R, E35D, M36I, R41K, L63V, H69K, T74S, L89M, I93L | C |
| | 335 | SK335 | HM593340 | None | | | | T12S, I15V, L19V, E35D, M36I, N37E, R41K, L63V, H69K, T74S, L89M, I93L | C |
| | 352 | SK352 | HM593358 | None | | | | T12TS, I15V, L19I, M36I, R41K, L63V, H69K, L89I, I93L | C |
| | 374 | SK374 | HM593381 | None | | | | T12S, I15V, L19V, E35DN, M36I, N37ND, R41K, Q61E, L63V, E65D, H69K, L89M, I93L | C |
| | 382 | SK382 | HM593388 | None | | | | L10IMV, K14KR, L19V, M36I, R41K, L63V, H69K, L89M, I93L | C |
| | 406 | SK406 | HM593413 | None | | | | T12S, I15V, L19I, E35D, M36I, R41K, L63V, H69K, T74S, L89M, I93L | C |
| | 407 | SK407 | HM593414 | None | | | | T12S, I15V, L19I, E35D, M36I, R41K, L63V, H69K, T74S, L89M, I93L | C |
| | 433 | SK433 | HM593443 | None | | | | T12S, I15V, L19T, E35D, M36I, R41K, L63V, H69K, T74S, L89M, I93L | C |
| | 435 | SK435 | HM593444 | None | | | | T12S, I15V, L19I, E35D, M36I, R41K, L63V, H69K, L89M | C |
| | 436 | SK436 | HM593445 | None | | | | T12S, I15V, L19I, E35D, M36I, R41K, L63V, H69K, T74S, L89M, I93L | C |
| | 443 | SK443 | HM593453 | None | | | | T12S, I15V, L19V, E35D, M36I, R41K, L63V, H69K, L89M, I93L | C |
| | 58 | SK58 | HM593472 | None | | | | T12S, I15V, L19V, M36I, R41K, L63V, H69K, T74S, L89LM, I93L | C |
| | 59 | SK59 | HM593473 | None | | | | T12S, I15V, L19I, N37S, R41K, L63V, H69K, V77I, L89M, I93L | C |
| | 8 | SK8 | HM593493 | None | | | | T12S, K14R, I15V, L19I, M36I, R41K, L63V, H69K, L89M, I93L | C |
| Yang (2010) | 2010693433 | 2010693433 | JQ616876 | None | | | | T12S, I15V, G16E, L19I, M36I, L63V, H69K, L89I, I93L | C |
| Yebra (2010) | 303103 | 06SP0303103 | FJ481652 | None | | | | T12S, I15V, L19I, M36I, R41K, L63V, H69K, K70R, L89M | C |
| | 296425 | 06SP0296425 | FJ481653 | None | | | | T12S, L19I, M36I, R41K, L63V, H69K, T74S, V77I, L89M, I93L | C |
| | 398972 | 07SP398972 | FJ481655 | None | | | V11I | I15V, L19T, M36I, R41K, L63V, H69K, T74S, L89M, I93L | C |
| | 401347 | 07SP401347 | FJ481656 | None | | | | I13V, I15V, N37K, R41N, L63V, H69K, T74S, L89M, I93L | C |
| Bussmann (2011) | B0685 | B0685 | JQ616993 | None | | | | L19I, M36I, R41K, K45R, D60E, L63V, H69K, L89M, I93L | C |
| | B0545 | B0545 | JQ616999 | None | | | | I15V, L19I, E35D, M36I, R41K, L63V, H69K, T74S, L89M, I93L | C |
| | B0741 | B0741 | JQ617021 | None | | | | K14R, I15V, L19V, E35D, M36I, R41K, L63V, H69K, T74S, L89M, I93L | C |
| | B0754 | B0754 | JQ617028 | None | | | | I15V, L19V, M36I, R41K, L63V, H69K, L89M, I93L | C |
| | B0775 | B0775 | JQ617039 | None | | | | K14R, I15V, L19I, E35D, M36I, R41K, R57K, L63V, H69K, T74S, L89M | C |
| | B0777 | B0777 | JQ617040 | None | | | | I15V, L19I, E35D, N37S, R41K, L63V, H69K, T74S, V77I, L89M, I93L | C |
| | B0550 | B0550 | JQ617042 | None | | | | I15V, L19I, E35D, M36I, R41K, L63V, H69K, T74S, L89M, I93L | C |
| | B0564 | B0564 | JQ617058 | None | | | | I15V, L19IV, M36MI, N37NS, R41K, I62V, L63V, I64L, H69K, A71T, L89M, I93L | C |
| | B0578 | B0578 | JQ617071 | None | | | | L19I, M36I, R41K, L63V, H69K, T74S, L89M, I93L | C |
| | B0582 | B0582 | JQ617075 | None | | | | I15V, L19I, E35D, M36I, R41K, L63V, H69K, T74S, L89M, I93L | C |
| | B0596 | B0596 | JQ617086 | None | | | | I15V, L19I, E35D, M36I, R41K, L63V, H69K, T74S, L89M, I93L | C |
| | B0599 | B0599 | JQ617089 | None | | | | I15V, L19I, N37C, R41K, L63V, H69K, T74S, V77I, L89M, I93L | C |
| | B0600 | B0600 | JQ617090 | None | | | | I15V, E35D, M36I, N37ND, R41K, L63V, I64M, H69K, T74S, L89M, I93L | C |
| | B0609 | B0609 | JQ617097 | None | | | | I15V, L19I, M36I, R41K, D60E, Q61E, L63V, H69K, V82I, L89M, I93L | C |
| | B0636 | B0636 | JQ617113 | None | | | | I15V, L19I, A22AG, E35D, M36I, R41K, L63V, H69K, T74S, V77I, L89M, I93L | C |
| | B0660 | B0660 | JQ617121 | None | | | | I15V, G16E, L19I, E35D, N37Q, L63V, H69K, V77I, L89M, I93L | C |
| de Medeiros (2011) | Pat008 | RS140 | JF487837 | None | | | | G16E, N37K, R41T, L63V, I64L, H69K, L89M, I93L | C |
| | Pat027 | RS001 | JF487856 | None | | | | I15V, M36I, N37K, R41N, L63V, H69K, L89R | C |
| Ferreira (2011) | BRMT3086 | BRMT3086 | HQ638743 | None | | | | L10M, T12S, I13V, I15V, L19I, M36I, N37K, R41N, Q61E, I62V, L63V, E65D, H69K, T74S, L89M, I93L | C |
| Graf (2011) | SC70 | SC70 | JF774023 | None | | | | I13L, I15V, M36I, N37K, R41N, Q61K, L63V, H69K, T74S, V82I, L89M, I93L | C |
| | SC106 | SC106 | JF774042 | None | | | | I15V, M36I, N37K, R41N, K45R, L63V, H69K, L89M, I93L | C |
| | SC133 | SC133 | JF774056 | None | | | | I15V, G16A, K20R, M36I, N37K, R41N, K45R, L63V, H69K, L89I, I93L | C |
| Green (2011) | 707PKE37F | 707PKE37F | HM623524 | None | | | L33F | T12S, L19I, R41K, L63V, H69K, L89M | C |
| | 707PKE39F | 707PKE39F | HM623526 | None | | | | L10V, T12TA, I15IV, L19V, M36I, R41K, L63V, H69K, T74S, L89M, I93L | C |
| Hamers (2011) | CP076302196 | CP076302196 | HQ993806 | None | | | | T12S, I15V, L19I, M36I, N37K, R41N, L63V, H69K, L89M, I93L | C |
| | CP076302316 | CP076302316 | HQ993858 | None | | | | I15V, L19I, M36I, N37K, R41N, D60E, Q61E, I62V, L63V, I64M, H69K, L89M, I93L | C |
| | CP076304261 | CP076304261 | HQ993949 | None | | | | T12S, I15V, L19V, M36I, N37K, R41N, L63V, H69K, I93L | C |
| | CP076304264 | CP076304264 | HQ993952 | None | | | | T12S, I15V, L19I, M36I, P39PS, R41K, I62V, L63V, H69K, A71T, I93L | C |
| | CP076303159 | CP076303159 | HQ994178 | None | | | | T12S, I15V, L19I, M36I, R41K, L63V, H69K, L89LM, I93L | C |
| | CP076303171 | CP076303171 | HQ994189 | None | | | | I15V, L19I, E35D, M36I, K45R, L63V, H69K, V82I, L89M, I93L | C |
| | CP076303181 | CP076303181 | HQ994197 | None | | | | T12S, G17D, L19I, E35D, M36I, R41K, L63V, H69K, L89M, I93L | C |
| | CP076303237 | CP076303237 | HQ994236 | None | | | | I3V, L10I, I15V, L19I, E35D, M36I, R41K, L63V, H69K, T74S, L89M, I93L | C |
| | CP076303238 | CP076303238 | HQ994237 | None | | | | T12S, I15V, L19I, M36I, R41K, L63V, H69K, V82I, L89M, I93L | C |
| | CP076305050 | CP076305050 | HQ994290 | None | | | | T12S, I15V, L19I, M36I, N37D, R41K, D60E, L63V, H69K, L89M, I93L | C |
| | CP076305056 | CP076305056 | HQ994295 | None | | | | L10V, K14NS, I15V, L19T, K20R, M36I, R41K, D60E, L63V, H69K, I72T, R87RG, L89M, I93L | C |
| | CP076305095 | CP076305095 | HQ994322 | None | | | | T12S, I15V, L19I, M36I, R41K, L63V, H69K, L89M, I93L | C |
| | CP076300328 | CP076300328 | HQ994367 | None | | | | T12S, I15V, L19I, K20R, M36I, R41K, L63V, H69K, V77I, L89M, I93L | C |
| | CP076300332 | CP076300332 | HQ994369 | None | | | | L10M, T12S, L19I, K20R, M36I, P39S, R41K, L63V, H69K, L89M, I93L | C |
| | CP076300377 | CP076300377 | HQ994385 | None | | | | I15V, L19T, E35D, M36I, N37D, R41K, R57K, L63V, H69K, L89LM, I93L | C |
| | CP076300382 | CP076300382 | HQ994389 | None | | | | T12S, I15V, L19I, K20R, E35ED, N37NS, R41K, L63V, H69K, V77I, V82I, L89M, I93L | C |
| | CP076301432 | CP076301432 | HQ994409 | None | | | | L10I, T12S, L19I, M36I, R41K, Q61N, L63V, E65D, H69K, L89M, I93L | C |
| | CP076301470 | CP076301470 | HQ994436 | None | | | | T12S, K14KR, I15V, L19I, E35D, M36I, R41K, I62V, L63V, H69K, T74S, V82I, L89M, I93L | C |
| | CP076301509 | CP076301509 | HQ994459 | None | | | | T12S, I15V, L19I, K20R, E35D, M36I, R41K, L63V, H69K, L89M, I93L | C |
| | CP076301512 | CP076301512 | HQ994460 | None | | | | T12S, I15V, L19I, M36I, R41K, L63V, H69K, T74S, L89M, I93L | C |
| | CP076302145 | CP076302145 | HQ994509 | None | | | | Q2S, I3N, T4P, L5F, W6L, L10V, L19I, M36I, N37S, R41K, L63V, H69K, T74S, L89M, I93L | C |
| | CP076302156 | CP076302156 | HQ994513 | None | | | | T4TS, G17D, L19I, N37S, L63V, H69K, T74S, V77I, L89M, I93L | C |
| | CP076302174 | CP076302174 | HQ994524 | None | | | | T12S, L19I, M36I, R41K, Q61E, L63V, I64M, H69K, L89M, I93L | C |
| | CP076300922 | CP076300922 | HQ994541 | None | | | | I15V, L19I, M36I, R41K, L63V, H69K, I93L | C |
| | CP076300927 | CP076300927 | HQ994543 | None | | | | L10X, T12S, K14R, I15V, L19V, K20R, M36MI, N37S, R41K, L63V, H69K, V77I, L89M, I93L | C |
| | CP763A03301 | CP763A03301 | HQ994622 | None | | | | T12S, I15V, L19T, E35D, M36I, R41K, K45R, I62V, L63V, H69K, A71T, I72V, I93L | C |
| | CP763A03313 | CP763A03313 | HQ994631 | None | | | | T12S, I15V, L19I, M36I, R41K, D60E, Q61E, L63V, H69K, V82I, L89M, I93L | C |
| | CP763A03407 | CP763A03407 | HQ994662 | None | | | | I15V, L19I, E35D, M36I, R41K, R57K, L63V, H69K, V82I, L89LM, I93L | C |
| | CP763A03419 | CP763A03419 | HQ994669 | None | | | | T12S, I15V, L19I, M36I, R41K, L63V, H69K, I93L | C |
| | CP763A03646 | CP763A03646 | HQ994684 | None | | | | T12S, I13V, K14T, G16E, L19T, M36I, N37NS, L63V, H69K, I72V, T74S, L89M, I93L | C |
| | CP763A03664 | CP763A03664 | HQ994687 | None | | | | M36I, R41K, L63V, H69K, T74S, L89M, I93L | C |
| | CP763A03672 | CP763A03672 | HQ994691 | None | | | | L10V, I15V, L19I, K20R, M36I, R41K, L63V, H69K, T74S, V77I, L89LM, I93IL | C |
| | CP763A03683 | CP763A03683 | HQ994695 | None | | | | T12S, I15V, L19T, M36I, R41K, L63V, H69K, L89M, I93L | C |
| | CP763A04094 | CP763A04094 | HQ994702 | None | | | | I15V, L19T, M36I, R41K, L63V, H69K, L89M, I93L | C |
| | CP076300939 | CP076300939 | HQ994716 | None | | | | T12S, I15V, L19I, E35D, M36I, N37D, R41K, L63V, H69K, T74S, L89M, I93L | C |
| | CP076300942 | CP076300942 | HQ994718 | None | | | | T12S, I15V, L19I, M36I, R41K, Q61QE, L63V, H69K, I72IV, T74S, L89M, I93L | C |
| | CP076300988 | CP076300988 | HQ994749 | None | | | | K14S, I15V, L19I, M36I, R41K, D60E, Q61E, L63V, H69K, I72IV, L89M, I93L | C |
| | CP076300995 | CP076300995 | HQ994753 | None | | | | T12S, I15V, L19I, M36I, R41K, Q61QE, L63V, I64IM, E65ED, H69K, V82I, L89M, I93L | C |
| | CP076300996 | CP076300996 | HQ994754 | None | | | | T12S, I15V, L19I, M36I, N37S, R41K, L63V, H69K, T74S, L89M, I93L | C |
| | CP076300998 | CP076300998 | HQ994756 | None | | | | K14S, I15V, L19I, M36I, R41K, D60E, Q61E, L63V, H69K, I72IV, L89M, I93L | C |
| | CP076301021 | CP076301021 | HQ994766 | None | | | | T12S, I15V, L19I, E35D, M36MI, N37NS, R41K, L63V, H69K, T74S, L89M, I93IL | C |
| | CP076301091 | CP076301091 | HQ994779 | None | | | | T12S, I15V, L19I, E35D, M36I, R41K, L63V, H69K, T74S, L89M, I93L | C |
| | CP076302669 | CP076302669 | HQ994811 | None | | | | T12S, I15V, L19I, M36I, R41K, L63V, H69K, T74S, L89M, I93L | C |
| | CP076302682 | CP076302682 | HQ994821 | None | | | | L10I, T12S, I15V, L19I, M36I, R41K, L63V, H69K, T74S, V77I, L89M, I93L | C |
| | CP076302684 | CP076302684 | HQ994823 | None | | | | T12PS, I15V, L19T, M36I, N37S, R41K, Q61E, L63V, H69K, T74S, L89M, I93L | C |
| | CP076302693 | CP076302693 | HQ994831 | None | | | | T12Q, I15V, L19I, M36IL, N37S, R41K, L63V, H69K, T74S, L89M, I93L | C |
| | CP076302694 | CP076302694 | HQ994832 | None | | | | T12S, I15V, G16E, L19I, E35D, M36I, R41K, L63V, H69K, T74S, L89M, I93L | C |
| | CP076302697 | CP076302697 | HQ994835 | None | | | | L10IV, T12S, I15V, M36I, R41K, L63V, H69K, T74S, L89M, I93L | C |
| | CP076302712 | CP076302712 | HQ994849 | None | | | | T12S, I15V, L19I, M36I, N37NS, R41K, L63V, H69K, T74S, L89M, I93L | C |
| | CP076302716 | CP076302716 | HQ994853 | None | | | | T12S, I15V, L19T, K20R, M36I, N37S, R41K, L63V, H69K, I72V, T74S, V77I, L89M, I93L | C |
| | CP076302723 | CP076302723 | HQ994860 | None | | | | K14R, I15V, K20T, M36I, R41K, I62IV, L63V, H69K, T74S, L89M, I93L | C |
| | CP763A03352 | CP763A03352 | HQ994891 | None | | | | I15V, L19I, M36I, N37NS, R41K, L63V, H69K, T74S, L89M, I93L | C |
| | CP763A03363 | CP763A03363 | HQ994900 | None | | | | T12S, L19I, M36I, R41K, Q61E, L63V, H69K, T74S, L89M, I93L | C |
| | CP763A03368 | CP763A03368 | HQ994904 | None | | | | I15V, L19I, M36I, N37E, R41K, L63V, H69K, T74A, L89M, I93L | C |
| | CP763A03371 | CP763A03371 | HQ994906 | None | | | | T12S, I15V, L19I, N37S, R41K, Q61E, L63V, H69K, T74S, V77I, L89M, I93L | C |
| | CP763A03375 | CP763A03375 | HQ994909 | None | | | | T12S, I15V, L19I, K20R, E35D, M36I, R41K, L63V, H69K, L89M, I93L | C |
| | CP763A03381 | CP763A03381 | HQ994914 | None | | | | L19I, M36I, R41K, L63V, H69K, I93L | C |
| | CP763A03385 | CP763A03385 | HQ994917 | None | | | | L5X, T12S, I15V, L19X, E21K, M36I, R41K, L63V, H69K, T74S, L89M, I93L | C |
| | CP076303071 | CP076303071 | HQ995251 | None | | | | T12S, I15V, L19I, M36I, N37K, R41N, K45R, D60E, L63V, H69K, L89M, I93L | C |
| | CP076301934 | CP076301934 | HQ995401 | None | | | | K14R, I15V, L19I, M36I, R41K, L63V, H69K, V82I, L89M, I93L | C |
| Manasa (2011) | 1001440 | 1001440 | JN664980 | None | | | | T12S, I15V, L19I, E35D, M36I, N37D, L63V, I64L, H69K, T74S, L89M, I93L | C |
| | 1005042 | 1005042 | JN665012 | None | | | | T12S, K14R, I15V, L19I, K20R, E35D, M36I, R41K, L63V, H69K, T74TS, L89M, I93L | C |
| | 1005313 | 1005313 | JN665021 | None | | | | I15V, L19I, E35D, M36I, R41K, K45R, L63V, H69K, L89M, I93L | C |
| | 1009062 | 1009062 | JN665029 | None | | | | T12S, I15V, L19V, M36I, R41K, L63V, H69K, T74S, L89M, I93L | C |
| Nwobegahay (2011) | BBVCT37ZA | BBVCT37ZA | GU139597 | None | | | | T12S, I15V, L19I, E35D, M36I, R41K, L63V, H69K, T74S, L89M, I93L | C |
| | BBVCT42ZA | BBVCT42ZA | GU139600 | None | | | | T12S, I15V, L19T, M36I, R41K, L63V, H69K, T74S, L89M, I93L | C |
| | BBVCT67ZA | BBVCT67ZA | GU139613 | None | | | | T12S, I15V, L19I, K20R, M36I, R41K, L63V, H69K, V77I, L89M | C |
| | BBVCT75ZA | BBVCT75ZA | GU139617 | None | | | | T12S, I15V, G16E, L19I, K20R, E35D, M36I, R41K, L63V, H69K, K70R, L89M, I93L | C |
| Nwobegahay (2011) | 08MB30ZA | 08MB30ZA | GU188750 | None | | | | I13L, I15V, L19T, M36I, R41K, D60E, L63V, H69K, L89M, I93L | C |
| | 08MB50ZA | 08MB50ZA | GU188832 | None | | | | L10I, T12S, I15V, L19T, M36L, N37S, R41K, L63V, H69K, L89M | C |
| | 08MB74ZA | 08MB74ZA | GU188849 | None | | | | L10I, T12S, I15V, L19V, E35D, M36I, R41K, K45R, D60E, I62V, L63V, H69Q, L89M, I93L | C |
| Parboosing (2011) | Pat028 | HRS105 | HQ844598 | None | | | | T12S, I15V, L19E, K20R, M36I, R41K, L63V, H69K, L89I, I93L | C |
| | Pat018 | HRS165 | HQ844608 | None | | | | I13V, L19I, R41K, L63V, H69K, T74S, V77I, L89M, I93L | C |
| Santos (2011) | J52 | J52_PR_RT | JN010442 | None | | | | I15V, M36I, N37K, R41N, L63V, H69K, L89M, I93L | C |
| | J124 | J124_PR | JN010500 | None | | | | L10I, V11A, I15V, G16E, M36I, N37K, R41N, L63V, H69K, L89M, I93L | C |
| | J357 | J357_PR | JN010741 | None | | | | L10V, I15V, L19Q, M36I, N37K, R41N, L63V, H69K, L89M, I93L | C |
| | J373 | J373_PR | JN010761 | None | | | | T12S, K14KR, I15V, L19I, M36MI, N37K, R41N, L63V, H69K, T74S, L89M, I93L | C |
| Sigaloff (2011) | GP25416072 | GP25416072_2 | JN381562 | None | | | | L10I, T12S, I15V, L19T, M36I, R41K, L63V, H69K, T74S, L89M, I93L | C |
| | GT00201512 | GT00201512_1 | JN381577 | None | | | | I15V, L19I, K20R, M36I, R41K, L63V, I64IM, H69K, V77I, V82I, L89M, I93L | C |
| | | GT00201512_2 | JN381578 | None | | | | L5LF, I15V, L19I, K20R, L23F, M36I, R41K, L63V, I64M, H69K, V77I, V82I, L89M, I93L | C |
| | GT00240772 | GT00240772_1 | JN381581 | None | | | | T12S, I15V, L19I, K20R, E35D, M36I, N37D, L63V, H69K, T74S, L89M, I93L | C |
| | | GT00240772_2 | JN381582 | None | | | | T12S, I15V, L19I, K20R, E35D, M36I, N37D, L63V, H69K, T74S, L89M, I93L | C |
| | GT00258683 | GT00258683_1 | JN381585 | None | | | | I13X, L19T, K20R, M36I, R41K, L63V, H69K, L89M, I93L | C |
| | | GT00258683_2 | JN381586 | None | | | | L19T, K20R, M36I, R41K, L63V, H69K, L89M, I93L | C |
| | GT00349623 | GT00349623 | JN381605 | None | | | | K14R, I15V, L19V, M36I, R41K, L63V, H69K, V82I, L89M, I93L | C |
| | GT00361780 | GT00361780 | JN381606 | None | | | | T12S, I15V, G16E, L19IT, K20R, M36I, P39S, R41K, Q61H, L63V, H69K, L89M, I93L | C |
| van Zyl (2011) | A103 | A103 | JN638067 | None | | | | T12S, I15V, Q18E, L19I, K20R, M36I, R41K, L63V, H69K, V77I, L89M, I93L | C |
| | A104 | A104 | JN638068 | None | | | | T12S, I15V, L19I, M36I, N37D, R41K, L63V, H69K, A71V, I72IV, V75I, L89M, I93L | C |
| | A110 | A110 | JN638070 | None | | | | T12S, I15V, L19I, M36I, R41K, L63V, H69K, T74S, V75VI, L89M, I93L | C |
| | A115 | A115 | JN638073 | None | | | | T12S, L19I, K20R, M36I, R41K, I62V, L63V, I64L, H69K, V82I, L89M, I93L | C |
| | A142 | A142 | JN638086 | None | | | | L10M, T12S, I15V, L19V, K20M, E35D, M36I, P39Q, R41K, L63V, H69K, L89M, I93L | C |
| | A181 | A181 | JN638106 | None | | | | T12S, I15V, L19I, M36I, R41K, L63V, H69K, T74S, L89M, I93L | C |
| | A184 | A184 | JN638109 | None | | | | T12S, I15V, G17D, L19I, K20R, E35D, M36I, R41K, I62V, L63V, H69K, T74S, L89M, I93L | C |
| | A193 | A193 | JN638114 | None | | | | I15V, G16GE, L19V, E35D, M36I, R41K, K45KR, R57K, L63V, H69K, T74S, L89M, I93L | C |
| | A216 | A216 | JN638127 | None | | | | L10I, T12S, I15V, L19I, M36I, R41K, L63V, H69K, T74S, L89M, I93L | C |
| | A220 | A220 | JN638129 | None | | | | L10LV, T12S, I15IV, L19I, M36I, N37S, R41K, L63V, H69K, L89M, I93L | C |
| | A224 | A224 | JN638133 | None | | | | T12P, L19I, M36I, R41K, L63V, H69K, T74S, L89M, I93L | C |
| | A245 | A245 | JN638142 | None | | | | T12S, L19I, K20R, M36I, R41K, L63V, H69K, L89M, I93L | C |
| | A335 | A335 | JN638198 | None | | | | K14KR, I15V, L19V, K20R, E35D, M36I, R41K, K45R, R57RK, L63V, G68E, H69K, L89M, I93L | C |
| | A35 | A35 | JN638203 | None | | | | I15V, L19I, M36I, N37S, P39PS, R41K, L63V, H69K, T74S, L89M, I93L | C |
| | A51 | A51 | JN638214 | None | | | | I15V, N37T, R41K, L63V, I64M, H69K, V77I, G86GE, L89M, I93L | C |
| | A52 | A52 | JN638215 | None | | | | T12S, I15V, L19I, M36I, R41K, L63V, H69K, T74S, L89M, I93L | C |
| Wright (2011) | AS2-0483B2 | AS2-0483B2 | HQ696804 | None | | | | L10V, I15V, L19I, M36I, R41K, L63V, H69K, T74S, L89M, I93L | C |
| | H_011 | H_011 | HQ696828 | None | | | | I15V, L19I, N37S, L63V, H69K, L89M, I93L | C |
| | OS_062 | OS_062 | HQ696835 | None | | | | I15V, E35D, M36I, R41K, Q61E, L63V, I64M, H69K, I72M, T74S, L89M, I93L | C |
| | OW_013 | OW_013 | HQ696837 | None | | | | T12S, I15V, L19I, E35D, M36I, N37E, R41K, K43R, L63V, H69K, T74S, L89M, I93L | C |
| | AS2-0483B7 | AS2-0483B7 | HQ696857 | None | | | | L10V, I15V, L19I, M36I, R41K, L63V, H69K, T74S, L89M, I93L | C |
| Ajoge (2012) | H58 | HP58 | HM854124 | None | | | | T12S, I15V, L19I, M36I, R41K, L63V, H69K, T74S, L89M, I93L | C |
| De Gascun (2012) | IRL06347 | IRL06347 | JN622823 | None | | | | I15V, L19LI, E35D, M36I, R41K, K43KR, L63V, I64L, H69K, L89M, I93L | C |
| | IRL01446 | IRL01446 | JN622843 | None | | | | T12S, I15V, Q18QE, L19T, E35D, M36I, R41K, L63V, H69K, L89M, I93L | C |
| | IRL16507 | IRL16507 | JN622861 | None | | | | T12TILS, I13V, I15IV, L19I, N37S, R41K, W42WS, L63V, H69K, T74TS, V77I, L89M, I93L, L97LI | C |
| | IRL32246 | IRL32246 | JN622879 | None | | | | L10M, T12A, L19I, M36I, R41K, L63V, H69K, V77I, L89M, I93L | C |
| | IRL05488 | IRL05488 | JN622896 | None | | | | T12S, L19I, E35D, M36I, R41K, L63V, H69K, T74S, L89M, I93L | C |
| | IRL08136 | IRL08136 | JN622900 | None | | | | T12S, I15V, L19I, E35D, M36I, R41K, L63V, H69K, T74S, L89M, I93L, N98NY | C |
| | IRL19453 | IRL19453 | JN622907 | None | | | | T12S, I15V, L19I, M36I, R41K, L63V, H69K, I93L | C |
| | IRL21030 | IRL21030 | JN622908 | None | | | | I15V, L19I, M36I, R41K, L63V, H69K, I93L | C |
| | IRL43146 | IRL43146 | JN622923 | None | | | | L10V, V11VG, L19I, E35D, M36I, N37H, R41K, L63V, H69K, L89M, I93L | C |
| | IRL54311 | IRL54311 | JN622934 | None | | | | T12S, I15V, G16E, L19I, K45KR, L63V, H69K, T74S, V77I, L89M, I93L | C |
| | IRL28234 | IRL28234 | JN622957 | None | | | | T12S, I15V, L19I, M36I, R41RK, Q61QE, L63V, H69K, T74S, L89M, I93L | C |
| | IRL33003 | IRL33003 | JN622959 | None | | | | T12S, I15V, L19I, M36I, R41K, L63V, H69K, I93L | C |
| | IRL43265 | IRL43265 | JN622968 | None | | | | T12S, I15V, L19IT, M36I, R41K, L63V, H69K, T74S, L89M, I93L | C |
| | IRL04107 | IRL04107 | JN622983 | None | | | | L10I, I15V, L19V, E35D, M36I, R41K, K45R, L63V, G68GE, H69K, T74S, L89M, I93L | C |
| | IRL22705 | IRL22705 | JN623001 | None | | | | T12S, I15V, L19I, M36I, R41K, L63V, H69K, L89M, I93L | C |
| | IRL54557 | IRL54557 | JN623021 | None | | | | T12S, I15V, L19I, K20R, E35D, M36I, R41K, L63V, H69K, T74S, I93L | C |
| | IRL65685 | IRL65685 | JN623035 | None | | | | T12S, I15V, L19I, N37NS, L38M, R41K, L63V, H69K, V77I, L89M, I93L | C |
| Gaspareto (2012) | JABS6 | JABS6PT | HM752151 | None | | | | I15V, M36I, N37K, R41N, L63V, H69K, L89M, I93L | C |
| | MRS25 | MRS25PT | HM752160 | None | | | | I15V, M36I, N37K, R41N, L63V, H69K, T74S, L89M, I93L | C |
| | LASB29 | LASB29PT | HM752163 | None | | | | M36I, N37K, R41N, L63V, H69K, L89M, I93L | C |
| Hassan (2012) | RS09000861 | RS09000861 | HQ441606 | None | | | | T12P, K14R, I15V, G16E, E35D, N37NS, R41K, L63V, H69K, I93L | C |
| Iweriebor (2012) | 07B18ZA | 07B18ZA | GU201805 | None | | | | T12S, I15V, L19I, M36I, L63V, H69K, L89M, I93L | C |
| | 07M22ZA | 07M22ZA | GU201816 | None | | | | T12S, I15V, L19I, E35D, M36I, N37D, L63V, H69K, T74S, L89M, I93L | C |
| | 07V5ZA | 07V5ZA | GU201821 | None | | | | T12S, I15V, L19V, M36I, R41K, L63V, H69K, I93L | C |
| Karlsson (2012) | SE_25 | SE_25 | JQ698682 | None | | | | T12S, I15V, L19I, E35D, M36I, R41K, I62IV, L63V, H69K, T74S, L89M, I93IL | C |
| | SE_31 | SE_31 | JQ698687 | None | | | | L10V, I15V, G16E, M36I, R41K, L63V, H69K, L89M, I93L | C |
| | SE_95 | SE_95 | JQ698731 | None | | | | T12S, I15IV, L19V, M36I, R41K, L63V, H69K, T74S, L89M, I93L | C |
| Luebbert (2012) | LEU 0130 | 70123883 | | None | | | | T12S, I15V, L19I, M36I, R41K, K43KN, K45KQ, K55KT, L63V, H69K, T74S | C |
| | LEU 0125 | 70107469 | | None | | | | I15V, M36I, R41K, L63V, I64IM, H69K | C |
| Musyoki (2012) | DGM.1 | DGM.1 | JN176286 | None | | | | L10I, T12S, I15V, L19V, M36I, R41K, Q61E, L63V, H69K, L89M, I93L | C |
| Nwobegahay (2012) | BBCR54ZA | BBCR54ZA | GU177495 | None | | | | T12S, I15V, L19I, K20R, E35D, M36I, R41K, L63V, H69K, L89M, I93L | C |
| | BBCR57ZA | BBCR57ZA | GU177497 | None | | | | T12S, I15V, L19I, K20R, E35D, M36I, R41K, L63V, H69K, T74S, L89M, I93L | C |
| | MC41ZA | MC41ZA | GU177524 | None | | | | T12S, L19T, M36I, R41K, L63V, H69K, T74S, L89M, I93L | C |
| | MC43ZA | MC43ZA | GU177526 | None | | | V11I | T4I, L10M, T12S, K14R, I15V, L19T, E35D, M36I, N37E, R57K, L63V, H69K, L89M, I93L | C |
| | MC46ZA | MC46ZA | GU177544 | None | | | | T12S, I15V, L19I, K20R, E35D, M36I, R41K, L63V, H69K, L89M, I93L | C |
| Sinha (2012) | AIIMS-43 | AIIMS-43 | HQ453374 | None | | | | T12S, K14KR, I15V, G16E, L19I, E35D, M36I, R41K, K45R, L63V, H69K, L89M, I93L | C |
| Ssemwanga (2012) | 6441HR | 6441HR | JF800206 | None | | | V11I | L10I, I15V, L19I, M36I, N37D, R41K, L63V, H69K, I93L | C |
| Alencar (2013) | PE2-0023 | PE2-0023 | JQ238026 | None | | | | I13V, I15V, N37K, R41N, L63V, I64M, H69K, T74S, L89M, I93L | C |
| | MG2-0040 | MG2-0040 | JQ238210 | None | | | | L10V, I15V, G16E, M36I, N37K, P39S, R41N, L63V, H69K, T74A, L89M, I93L | C |
| Chen (2013) | 11YNHH086 | 11YNHH086 | JX412351 | None | | | | T12S, I15V, L19I, M36I, R41K, D60E, L63V, H69K, T74A, L89M, I93L | C |
| Ferreira (2013) | BR09SP242 | BR09SP242 | HM534027 | None | | | | T12P, K14R, I15V, M36I, N37K, R41N, L63V, H69K, A71T, I93L | C |
| | BR09SP373 | BR09SP373 | HM534197 | None | | | | T12S, I15V, L19I, M36I, N37K, R41N, L63V, H69K, T74S, L89M, I93L | C |
| Frentz (2013) | EHR-22183 | EHR-22183 | JX299915 | None | | | | T12S, I15V, L19IT, M36I, R41K, L63V, H69K, T74S, L89M, I93L | C |
| | EHR-33342 | EHR-33342 | JX300105 | None | | | | T12TA, K14KR, I15V, M36I, N37D, R41K, L63V, H69K, L89M, I93L | C |
| | EHR-41332 | EHR-41332 | JX300239 | None | | | | I15V, L19T, K20T, M36T, R41K, L63V, H69K, V82I, I93L | C |
| | EHR-68242 | EHR-68242 | JX300687 | None | | | | W6WG, T12S, I15V, L19Q, E21V, E35EK, M36I, R41K, L63V, H69K, L89M, I93L | C |
| | EHR-84258 | EHR-84258 | JX300968 | None | | | | K14R, I15V, M36I, N37D, R41K, L63V, H69K, T74TA, L89M, I93L | C |
| Hawke (2013) | 9051319 H | 9051319 H | KC238243 | None | | | | T12S, L19T, K20R, M36I, R41K, L63V, H69K, T74S, V77I, L89M, I93L | C |
| | 9077520 H | 9077520 H | KC238252 | None | | | | I13V, I15IV, K20R, M36I, N37D, R41K, L63V, I64V, H69K, I93L | C |
| Tramuto (2013) | CV1253_3 | CV1253_3 | HQ667671 | None | | | | T12S, K14R, I15V, M36I, N37K, R41N, K45R, L63V, H69K, L89M, I93L | C |