| Author (yr) |
Patient |
Isolate |
Acc# |
PIs |
Wks | PIMajorDRMs |
PIMinorDRMs |
OtherMut | Subtype |
| Novitsky (1999) | 96BW16 | 96BW16 | | None | | | | I15V, L19V, M36I, R41K, L63T, H69K | C |
| Shafer (1999) | Z295 | Z295 | AF083266 | None | | | | T12S, L19I, M36I, R41K, D60E, L63T, I64L, H69K, L89M, I93L | C |
| Vergne (2000) | LV39HALD | LV39HALD | AJ287005 | None | | | | T12S, L19I, K20R, M36I, R41K, L63T, H69K, L89M, I93L | C |
| Koch (2001) | NK-8 | NK-8 | AY007737 | None | | | | T12S, I15V, L19Q, M36I, N37K, R41N, L63T, H69K, V82I, L89M, I93L | C |
| Rodenburg (2001) | CR_98IN022 | CR_98IN022 | AF286232 | None | | | | T12S, I15V, L19I, D25G, M36I, R41K, L63T, H69K, I93L | C |
| Yahi (2001) | NY_M2 | M2 | AY010382 | None | | | | T12P, I15V, G16E, E35D, L63T, I64M, H69K, L89M, I93L | C |
| | NY_M3 | M3 | AY010393 | None | | | | L10M, T12S, I15V, N37S, L63T, H69K, K70Q, L89M, I93L | C |
| | NY_M63 | M63 | AY010426 | None | | | | T12P, I15V, G16E, E35D, L63T, I64M, H69K, L89M, I93L | C |
| Handema (2002) | H00ZM4810 | H00ZM4810 | AB081175 | None | | | | I15V, G16E, L19V, E35D, L63T, I64L, H69K, L89M, I93L | C |
| | H00ZM4790 | H00ZM4790 | AB081170 | None | | | | T12S, I15V, G16E, L19I, M36I, N37S, L63T, H69K, L89M, I93L | C |
| Kantor (2002) | TCDD-10 | TCDD-10 | | None | | | | L10I, T12S, G17D, L19I, M36L, N37S, D60E, L63T, H69K, L89M, I93L | C |
| Novitsky (2002) | 00BW1921 | 00BW1921 | AF443101 | None | | | | T12S, I15V, L19I, M36I, R41K, L63T, H69K, T74A, L89M, I93L | C |
| Snoeck (2002) | BE7 | BE7 | AF338990 | None | | | | T12S, I15V, L19I, M36L, N37S, R41K, L63T, H69K, L89M, F99FL | C |
| Brindeiro (2003) | BRP2126 | BRP2126 | AY213415 | None | | | | I15V, N37K, R41N, L63T, H69K, I93L | C |
| | BRP2173 | BRP2173 | AY213496 | None | | | | T12A, K14E, G16E, M36I, N37K, R41N, K45R, Q61K, L63T, H69K, L89M, I93L | C |
| Gordon (2003) | ZA066p01 | ZA066p01 | AY137004 | None | | | | T12S, I15V, G16E, L19I, M36T, N37S, R41K, L63T, H69K, L89M, I93L | C |
| | ZA026p01 | ZA026p01 | AY136979 | None | | | | T12S, I15V, L19I, M36I, N37D, R41K, Y59F, L63T, I66L, H69K, L89M, I93L | C |
| | ZA023p01 | ZA023p01 | AY136976 | None | | | | I15V, G16E, L19I, R41K, L63T, H69K, V77I, I93L | C |
| Jorgensen (2003) | JLB_Pat45 | HIM419471 | AJ419471 | None | | | | T12S, I15V, L19T, M36I, N37S, R41K, L63T, H69K, I72X, I93L | C |
| | JLB_Pat72 | HIM419498 | AJ419498 | None | | | | I15V, K20R, M36I, N37K, R41N, R57K, L63T, H69K, T74A, L89M, I93L | C |
| Soares (2003) | BRP2024 | BRP2024 | AF527207 | None | | | | L10I, K20R, M36I, N37K, R41N, L63T, H69K, L89M | C |
| | BRP2083 | BRP2083 | AF527294 | None | | | | Q2K, T12S, K14R, I15V, K20R, E35D, M36I, N37K, P39S, R41N, L63T, H69K, I72T, L89I | C |
| Arroyo (2004) | 01TZA207 | 01TZA207 | AY253307 | None | | | | T12S, I13V, I15V, K20R, M36I, R41K, L63T, H69K, K70R, L89M, I93L | C |
| Deshpande (2004) | in12 | in12 | AY515738 | None | | | | T12S, K14KR, I15V, M36L, N37S, R41K, Q61H, L63T, H69K, L89M, I93L | C |
| | in3 | in3 | AY515730 | None | | | | T4TN, T12S, K14R, I15V, L19I, E35D, M36I, R41K, L63T, H69K, V82I, L89M, I93L | C |
| | in134 | in134 | AY515841 | None | | | | T12S, I15V, L19T, M36V, R41K, L63T, H69K, A71T, I93L | C |
| | in8 | in8 | AY515734 | None | | | | T12S, K14R, I15V, L19M, E35D, M36I, R41K, L63T, H69K, V82I, L89M, I93L | C |
| | in22 | in22 | AY515746 | None | | | | T12S, K14R, I15V, L19M, E35D, M36I, R41K, L63T, H69K, V82I, L89M, I93L | C |
| | in135 | in135 | AY515842 | None | | | | T12S, K14R, I15V, L19I, M36I, N37S, R41K, L63T, H69K, V82I, L89M, I93L | C |
| | in81 | in81 | AY515794 | None | | | | T12S, I15V, L19I, M36I, R41K, L63T, H69K, I93L | C |
| | in77 | in77 | AY515790 | None | | | | T12PS, I15V, L19I, E35D, M36I, R41K, L63T, H69K, T74A, L89M, I93L | C |
| Holguin (2004) | IN81071261 | IN81071261 | AY551448 | None | | | | T12S, I15V, G16E, L19I, M36L, L63T, H69K, L89M, I93L | C |
| | IN81071458 | IN81071458 | AY551453 | None | | | | T12S, K14KR, I15V, G16GE, L19I, M36V, R41K, L63T, H69K, L89M, I93L | C |
| Servais (2004) | SJ_Pat18 | SJKLM038 | AJ412960 | None | | | | T12S, I15V, G16GE, M36I, R41K, L63T, H69EK, L89M, I93L | C |
| Balakrishnan (2005) | YRG28 | YRG28 | AY787514 | None | | | | K14R, I15V, L19I, M36IV, R41K, L63T, H69K, V82I, L89M, I93L | C |
| | YRG1 | YRG1 | AY787487 | None | | | | T12X, I15V, L19I, E35D, M36I, R41K, L63T, H69K, T74S, L89M, I93L | C |
| | YRG2 | YRG2 | AY787488 | None | | | | T12X, I15V, L19T, M36I, K43R, Q61E, L63T, I64M, H69K, L89M, I93L | C |
| | YRG8 | YRG8 | AY787494 | None | | | | T12S, I15V, L19I, M36I, N37D, R41K, L63T, I64M, H69K, V82VI, L89M, I93L | C |
| Bellocchi (2005) | 003 | MC003 | GU199550 | None | | | | I13IV, K14T, I15IV, L19T, K20KR, M36I, R41K, K45R, D60E, L63T, H69K, L89M, I93L | C |
| | 060 | MC060 | GU199551 | None | | | | T12A, I15IV, L19T, M36I, R41K, K45R, D60E, L63T, H69K, V82VI, L89M, I93L | C |
| | 589 | MT000589 | GU199552 | None | | | | T12S, I15V, L19I, M36I, N37S, R41K, L63T, H69K, L89M, I93L | C |
| Bessong (2005) | 01PB8ZA | 01PB8ZA | AY510035 | None | | | | T12S, I15V, L19I, M36I, R41K, L63T, H69K, I93L | C |
| Bussmann (2005) | 01BW2796S | 01BW2796S | AY829296 | None | | | | T12S, I15V, L19I, M36I, R41K, K43R, L63T, H69K, T74A, L89M, I93L | C |
| | 01BW0971S | 01BW0971S | AY829270 | None | | | | T12S, I15V, L19I, E35D, M36I, N37D, R41K, K45R, D60E, Q61E, I62V, L63T, H69K, L89I, I93L | C |
| | 01BW2673S | 01BW2673S | AY829293 | None | | | | T12S, I15V, L19I, M36I, N37S, R41K, I62V, L63T, E65D, H69K, L89M, I93L | C |
| | 01BW2165S | 01BW2165S | AY829288 | None | | | | K14R, I15V, L19I, E35D, M36I, R41K, L63T, C67E, H69K, I93L | C |
| | 01BW549S | 01BW549S | AY829279 | None | | | | I15V, L19T, M36I, R41K, D60E, Q61D, L63T, H69K, I93L | C |
| | 01BW934S | 01BW934S | AY829284 | None | | | | T12S, I15V, G17D, L19V, M36I, N37K, R41K, K45R, Q61E, L63T, I64L, H69K, L89M, I93L | C |
| Ciccozzi (2005) | MC_AY611649 | C27 | AY611649 | None | | | | I15V, L19I, M36I, R41K, L63T, H69K, L89M, I93L | C |
| Eshleman (2005) | ESH11073 | ESH11073 | AY756887 | None | | | | K14N, I15V, L19I, E35D, M36I, R41K, D60E, L63T, H69K, I72IV, L89M, I93L | C |
| | ESH1099 | ESH1099 | AY756824 | None | | | | T12S, I15V, L19T, K20R, M36I, R41K, L63T, H69K, L89M, I93L | C |
| Grossman (2005) | 20556 | 20556PR219 | | None | | | | T12S, I15V, L19T, M36I, R41RK, Q61QE, L63T, H69K, T74S, L89M, I93L | C |
| | 22412 | 22412PR286 | | None | | | | W6L, K14R, I15V, K20R, M36I, N37D, R41K, L63T, H69K, L89M, I93L | C |
| | 22691 | 22691PR281 | | None | | | D30DY | W6WR, K14R, I15V, Q18QL, K20R, D25DN, M36I, N37D, R41K, Y59YF, L63T, H69K, L89M, I93L | C |
| | 27503 | 27503PR449 | | None | | | | L10I, I13V, M36I, R41K, D60E, L63T, H69K, L89M | C |
| | 27536 | 27536PR472 | | None | | | | T12S, I15V, L19T, M36I, R41K, L63T, I64L, H69K, T74S, L89M, I93L | C |
| Non-B Workgroup (2005) | UK953 | UK953 | AY900785 | None | | | | T12S, I15V, L19T, M36I, N37K, R41N, L63T, H69K, T74S, L89M, I93L | C |
| | UK989 | UK989 | AY900790 | None | | | | I15V, L19I, M36I, N37S, L38LP, R41K, L63T, H69K, L89M, I93L | C |
| | UK1988 | UK1988 | AY900830 | None | | | | T12S, I15V, L19I, E35D, R41K, K45R, I62V, L63T, I64L, H69K, A71T, V77VI, I93L | C |
| | BR1002 | BR1002 | AY900899 | None | | | | L10I, K20R, M36I, N37K, R41N, L63T, H69K, L89M | C |
| | BR1021 | BR1021 | AY900913 | None | | | | Q2K, T12S, K14R, I15V, K20R, E35D, M36I, N37K, P39S, R41N, L63T, H69K, I72T, L89I | C |
| | UK4463 | UK4463 | AY901223 | None | | | | T12S, G17D, L19I, M36I, R41K, L63T, H69K, T74S, L89M, I93L | C |
| | TK1016 | TK1016 | | None | | | | I15V, L19I, M36I, N37K, R41N, L63T, H69K, I93L | C |
| | TK1026 | TK1026 | | None | | | V11VI | T12P, K14KR, I15V, L19I, D29DH, M36I, R41K, L63T, H69K, I93L | C |
| | TK3018 | TK3018 | | None | | | | T12S, I15V, L19T, M36I, N37S, R41K, L63T, H69K, I93L | C |
| Tovanabutra (2005) | 98US_MSC5016 | 98US_5016 | AY444801 | None | | | | T12A, I15V, G16E, L19I, M36I, N37S, L63T, I64M, H69K, I72V, L89M, I93L | C |
| Bessong (2006) | POB_01PB40ZA | 01PB40ZA | DQ222258 | None | | | | T12S, I15V, L19I, M36I, R41K, L63T, H69K, L89M, I93L | C |
| Jayaraman (2006) | 2-01-0096 | 2-01-0096 | | None | | | | T12S, I15V, G16E, L19I, K20R, M36I, R41K, R57K, L63T, H69K, I93L | C |
| Parreira (2006) | PG17 | PG17 | AM071439 | None | | | | T12S, I13V, I15V, L19I, M36L, N37C, R41K, L63T, H69K, L89M | C |
| | PG232 | PG232 | AM071443 | None | | | | I15V, L19T, M36I, N37A, R41K, L63T, H69K, I93L | C |
| Rodrigues (2006) | BR04RS134 | BR04RS134 | DQ070547 | None | | | | T12P, I15V, L19I, M36I, N37K, R41N, L63T, H69K, L89M | C |
| Rousseau (2006) | Pt27 | 03PS050MB1 | DQ369980 | None | | | | T12S, I13V, I15V, L19V, M36I, R41K, L63T, I64M, H69K, L89M, I93L | C |
| | Pt31 | 03PS055MB1 | DQ396373 | None | | | | T12S, I15V, L19V, M36I, N37S, R41K, L63T, C67Y, H69K, L89M, I93L | C |
| | Pt44 | 03PS083MB1 | DQ351229 | None | | | | T12A, I15V, L19V, M36I, R41K, L63T, H69K, V82I, L89M, I93L | C |
| | Pt56 | 03PS105MB2 | DQ445632 | None | | | | T12S, L19I, T26I, N37S, R41K, L63T, H69K, T74S, L89M, I93L | C |
| | Pt103 | 03SK065B1 | AY772694 | None | | | | L5F, T12S, K14R, I15V, L19I, M36I, R41K, L63T, H69K, T74S, L89M, I93L | C |
| | Pt111 | 03SK084B1 | AY901981 | None | | | | T12S, I15V, L19I, E35D, M36I, N37S, R41K, L63T, H69K, L89M, I93L | C |
| | Pt138 | 04PS157MB1 | DQ351232 | None | | | | T12S, I15V, G16E, L19I, M36I, R41K, K45R, L63T, E65D, H69K, L89M, I93L | C |
| | Pt150 | 04PS189B1 | DQ164117 | None | | | | T12S, L19I, M36I, L63T, H69K, L89M, I93L | C |
| | Pt158 | 04PS201B1 | DQ164111 | None | | | | L19T, K20R, E35D, M36I, R41K, L63T, H69K, L89M, I93L | C |
| | Pt161 | 04PS205B1 | DQ093599 | None | | | | T12S, I15V, L19V, E35D, M36I, R41K, K45R, L63T, H69K, T74S, L89M, I93L | C |
| | Pt168 | 04PS284B1 | DQ164120 | None | | | | K14R, I15V, L19I, E35D, M36I, R41K, L63T, H69K, L89M, I93L | C |
| | Pt212 | 04SK184B1 | DQ056418 | None | | | | T12S, I15V, L19T, M36I, R41K, L63T, H69K, V82I, I93L | C |
| | Pt223 | 04SK217B1 | DQ056417 | None | | | | T12S, I15V, L19I, M36I, R41K, L63T, H69K, I93L | C |
| Santos (2006) | 058PR | 058PR | AY275776 | None | | | | I15V, L19V, M36T, N37K, R41N, L63T, H69K, L89M, I93L | C |
| | C047 | C047 | DQ191001 | None | | | | I15V, M36I, N37K, R41N, L63T, H69K, L89M, I93L | C |
| | C076PR | C076PR | DQ191012 | None | | | | I15V, M36T, N37K, R41N, L63T, H69K, L89M, I93L | C |
| | PA244 | PA244 | DQ343999 | None | | | | Q7H, L10V, K14R, I15V, M36I, N37K, R41N, L63T, H69K, L89M, I93L | C |
| Church (2007) | 1099 | 1099 | EF602583 | None | | | | T12S, I15V, L19T, K20R, M36I, R41K, L63T, H69K, I85IV, L89M, I93L | C |
| | 11073 | 11073 | EF602626 | None | | | | K14N, I15V, L19I, E35D, M36I, R41K, D60E, L63T, H69K, I72IV, L89M, I93L | C |
| Dilernia (2007) | F349 | F349 | EF120244 | None | | | | T12P, I15V, L19I, M36I, N37K, R41I, R57K, L63T, H69K, A71T, I93L | C |
| | F098 | F098 | EF120337 | None | | | | L10V, T12S, I15V, L19I, M36MI, N37K, R41N, R57K, L63T, H69K, A71T, I93L | C |
| Gatanaga (2007) | C03-51110095-1 | C03-51110095-1 | AB640195 | None | | | | T12S, I15V, L19T, M36I, R41K, L63T, H69K, V82I, I93L | C |
| | C04-2066230-1 | C04-2066230-1 | AB640496 | None | | | | T12S, I15V, G17D, L19I, K20R, M36I, R41K, L63T, H69K, I72V, I93L | C |
| Kassu (2007) | ETH-G-008 | G-008 | AB285753 | None | | | | T12S, L19T, K20R, M36I, R41K, K45KR, L63T, H69K, K70KR, L89M, I93L | C |
| | ETH-G-009 | G-009 | AB285754 | None | | | | I15V, G16E, M36I, R41K, L63T, H69K, L89LM, I93L | C |
| | ETH-G-023 | G-023 | AB285760 | None | | | | T12S, K14KN, I15V, G16E, L19T, K20R, M36I, R57K, L63T, H69K, I93L | C |
| | ETH-G-117 | G-117 | AB285801 | None | | | | T12S, I15V, M36I, R41K, D60DE, Q61QE, L63T, I64IM, H69K, L89M, I93L | C |
| | ETH-G-135 | G-135 | AB285807 | None | | | | K14KR, I15IV, L19I, M36I, N37T, R41K, L63T, H69K, V82I, L89M, I93L | C |
| | ETH-G-139 | G-139 | AB285808 | None | | | | T12TA, K14KR, I15V, M36I, R41K, L63T, H69K, V82I, L89M, I93L | C |
| | ETH-G-159 | G-159 | AB285812 | None | | | | K14KR, I15IV, M36I, R41K, K45KR, L63T, H69K, L89M, I93L | C |
| Liu (2007) | SH049 | SH049 | EU079106 | None | | | | I15V, L19I, M36I, R41K, L63T, H69K, L89M, I93L | C |
| Martinson (2007) | CHB147M | CHB147M | EU152437 | None | | | | T12PS, I15V, L19V, K20R, E35D, M36I, R41K, K45KR, L63T, H69K, L89M, I93L | C |
| | CHB147B | CHB147B | EU152438 | None | | | | T12S, I15V, G17D, L19V, K20R, E35D, M36I, R41K, K45R, L63T, H69K, L89M, I93L | C |
| | KEH56M | KEH56M | EU152465 | None | | | | I15V, L19I, M36I, N37R, R41N, L63T, H69K, L89M, I93L | C |
| | KEH56B | KEH56B | EU152466 | None | | | | I15V, L19I, M36I, N37R, R41N, L63T, H69K, L89M, I93L | C |
| Novitsky (2007) | 1708 | 1708_5064 | EF026223 | None | | | | I15V, L19I, K20R, M36L, N37S, L63T, H69K, V77I, L89M, I93L | C |
| Sen (2007) | N053 | RT53-PL | EF186936 | None | | | | T12S, I15V, G16E, L19I, M36V, R41K, K45R, L63T, H69K, I93L | C |
| | N019 | RT19-PL | EF186945 | None | | | | T12S, I15V, G16E, L19I, M36I, N37S, R41K, R57K, D60E, L63T, H69K, K70R, I93L | C |
| | N018 | RT18-PL | EF186948 | None | | | | T12S, I15V, L19T, M36I, D60E, Q61E, L63T, H69K, V82I, L89M, I93L | C |
| | T092 | NPT92-PL | EF186958 | None | | | | T12S, I15V, L19I, M36I, R41K, D60E, Q61E, L63T, H69K, Q92QH, I93L | C |
| | T101 | NPT101-PL | EF186969 | None | | | | T12S, I15V, L19I, M36I, R41K, D60E, Q61E, L63T, H69K, L89M, I93L | C |
| | T100 | NPT100 | EF186931 | None | | | | T12S, I15V, L19I, M36I, R41K, D60E, L63T, H69K, V82I, L89M, I93L | C |
| | | NPT100-PL | EF186970 | None | | | | T12S, I15V, L19I, M36I, R41K, D60E, L63T, H69K, V82I, L89M, I93L | C |
| | T094 | NPT94-PL | EF186973 | None | | | | T12S, L19I, M36I, R41K, L63T, H69K, K70R, I72IT, T74S, L89M, I93L | C |
| | T109 | NPT109-PL | EF186976 | None | | | | T12S, K14R, I15IV, L19I, M36I, N37D, R41K, D60E, L63T, H69K, K70R, L89M, I93L | C |
| | PtID-RT7 | PtID-RT7 | DQ826598 | None | | | | T12S, I15V, L19I, M36I, R41K, D60E, Q61D, L63T, H69K, I93L | C |
| | PtID-RT19 | PtID-RT19 | DQ826605 | None | | | | T12S, I15V, G16E, L19I, M36I, N37S, R41K, R57K, D60E, L63T, H69K, K70R, I93L | C |
| | PtID-NPT92 | PtID-NPT92 | DQ826664 | None | | | | T12S, I15V, L19I, M36I, R41K, D60E, Q61DE, L63T, H69K, I93L | C |
| | PtID-NPT94 | PtID-NPT94 | DQ826665 | None | | | | T12S, L19I, M36I, R41K, L63T, H69K, K70R, I72T, T74S, L89M, Q92QP, I93L | C |
| Soundararajan (2007) | TRC16 | TRC16 | EF491936 | None | | | | T12S, K14R, I15V, G17N, L19I, E35D, M36I, N37D, R41K, R57K, L63T, H69K, I72IV, T74S, L89M | C |
| Vidal (2007) | U1825 | 02BU.U1825 | AM260228 | None | | | | L10M, T12S, I15V, L19I, M36I, N37K, R41N, L63T, H69K, I93L | C |
| | U1912 | 02BU.U1912 | AM260229 | None | | | | I15V, G17E, K20R, M36I, P39PS, R41K, L63T, H69K, I93L | C |
| | U2025 | 02BU.U2025 | AM260234 | None | | | | K14R, I15V, G16A, M36I, N37K, R41N, L63T, H69K, L89M, I93L | C |
| | U2515 | 02BU.U2515 | AM260246 | None | | | | T12S, I15V, G16A, M36I, N37K, R41N, Q61H, L63T, H69K, I93L | C |
| | U2809 | 02BU.U2809 | AM260249 | None | | | | T12S, I15V, M36I, N37K, R41N, L63T, H69K, L89M, I93L | C |
| | SF213 | 02BU.SF213 | AM260267 | None | | | | T12S, I15V, L19I, K20R, E35D, M36I, R41K, L63T, H69K, L89LM, I93L | C |
| | U1133 | 02BU.U1133 | AM260305 | None | | | | L10V, L33V, E35K, M36I, N37K, R41N, L63T, I64V, H69K, L89M, I93L | C |
| | U1516 | 02BU.U1516 | AM260312 | None | | | | T12P, I15V, L19V, M36I, N37K, R41N, L63T, H69K, I72V, T74S, L89M, I93L | C |
| | U1625 | 02BU.U1625 | AM260317 | None | | | | T12S, I15V, L19I, M36I, R41K, L63T, H69K, I93L | C |
| | U1703 | 02BU.U1703 | AM260318 | None | | | | I15V, K20R, E35D, M36I, N37K, R41N, K45R, R57K, L63T, H69K, V82I, L89M, I93L | C |
| von Wyl (2007) | 37 | 5933971 | EF449943 | None | | | | K14R, I15V, M36I, R41K, L63T, H69K, T74S, L89M, I93L | C |
| | 148 | 5875832 | EF449980 | None | | | | T12P, I15V, K20R, M36I, R41K, L63T, G68E, H69K, V82I, L89I, I93L | C |
| | | 5055699 | EF449802 | None | | | | T12P, I15V, K20R, M36I, R41K, L63T, G68E, H69K, V82I, L89I, I93L | C |
| Arora (2008) | 14 | PI-14 | | None | | | | T12S, I15V, L19I, M36I, R41K, L63T, H69K, I93L | C |
| | 15 | PI-15 | | None | | | | I15V, G16X, L19I, M36L, N37A, L63T, H69K, V82I, I93L | C |
| | 22 | PI-22 | | None | | | | E35D, M36I, N37D, R41K, L63T, H69K, T74S, L89M, I93L | C |
| | 24 | PI-24 | | None | | | | T12S, K14R, I15V, G16E, L19I, M36I, R41K, L63T, H69K, L89I, I93L | C |
| | 42 | PI-42 | | None | | | | T12S, K14R, I15V, L19T, K20R, E35D, M36I, R41K, L63T, H69K, L89M, I93L | C |
| | 44 | PI-44 | | None | | | | T12S, K14R, G16E, L19I, M36I, N37S, L63T, H69K, V82I, L89M, I93L | C |
| | 45 | PI-45 | | None | | | | I15V, L19I, M36L, N37A, L63T, H69K, L89M, I93L | C |
| | 46 | PI-46 | | None | | | | T12S, K14R, I15V, L19M, M36I, R41K, L63T, H69K, L89M, I93L | C |
| | 51 | PI-51 | | None | | | | T12A, I15V, G16E, L19T, M36I, N37S, R41K, L63T, H69K, V82I, L89M, I93L | C |
| | 6 | PI-6 | | None | | | | I15V, G17D, E35D, M36I, R41K, L63T, H69K, I93L | C |
| | 54 | PI-54 | | None | | | | T12S, L19I, M36I, R41K, L63T, H69K, T74S, L89M, I93L | C |
| | 8 | PI-8 | | None | | | | M36V, R41K, L63T, H69K, I93L | C |
| | 11 | PI-11 | | None | | | | T12S, K14R, I15V, G16E, L19I, M36V, N37K, R41K, Q61D, L63T, C67Y, H69K, L89M, I93L | C |
| Deho (2008) | 126 | 126 | EU244653 | None | | | | T12S, I15V, L19I, M36I, R41K, D60E, Q61D, I62V, L63T, I64M, H69K, I93L | C |
| | 145 | 145 | EU244686 | None | | | | L10I, T12S, I15V, G16E, L19I, M36I, R41K, L63T, H69K, I93L | C |
| Jacobs (2008) | 1756 | 1756 | EF602199 | None | | | | T12S, I15V, L19I, E35D, M36I, P39T, R41K, I62IV, L63T, H69K, L89M | C |
| | 1785 | 1785 | EF602224 | None | | | | T12S, I15V, L19T, N37S, R41K, L63T, H69K, V77I, I93L | C |
| | 1788 | 1788 | EF602227 | None | | | | T12S, L19T, K20R, M36I, N37K, R41I, L63T, H69K, L89M, I93L | C |
| | 1799 | 1799 | EF602233 | None | | | | I15V, L19I, K20R, E35D, M36I, R41K, I62V, L63T, H69K, I72IV, T74S, I93L | C |
| | 1667 | 1667 | EF602269 | None | | | | T12S, I15V, L19V, K20KR, M36I, R41K, L63T, H69K, I93L | C |
| Kamoto (2008) | MW30 | MW30 | JQ617147 | None | | | | I15V, L19I, K20R, M36I, P39L, L63T, H69K, I72V, L89M, I93L | C |
| Lall (2008) | G10 | G10-AFMC7 | EU158870 | None | | | | T12S, K14R, I15V, L19T, K20R, L33LS, M36I, R41K, K45KQ, L63T, I64L, H69K, L89M, I93L | C |
| | G48 | G48-AFMC34 | EU447779 | None | | | | T12S, L19I, K20R, M36I, N37S, R41K, D60DA, L63T, H69K, T74S, T80P, I85F, L89M, I93L | C |
| Marconi (2008) | ICH16 | ICH16 | EU308007 | None | | | | T12S, I15V, G16E, L19T, K20KR, M36I, N37NS, R41K, L63T, H69K, L89M, I93L | C |
| | SW012 | sw012 | EU308030 | None | | | | T12S, I15V, G16E, L19V, M36T, N37D, R41K, D60E, L63T, I64L, H69K, I72V, V77I, L89M, I93L | C |
| | SW016 | sw016 | EU308033 | None | | | | I15V, L19I, M36I, R41K, L63T, H69K, I93L | C |
| | SW023 | sw023 | EU308036 | None | | | | I15V, L19V, M36I, N37K, R41K, K43R, L63T, H69K, L89M, I93L | C |
| | SW031 | sw031 | EU308044 | None | | | | T12S, I15V, L19I, E35D, M36I, R41K, L63T, I64V, H69K, I93L | C |
| | SW075 | SW075 | EU308086 | None | | | | T12S, L19I, M36MI, R41K, L63T, H69K, T74S, L89M, I93L | C |
| | SW096 | SW096 | EU308104 | None | | | | T12S, I15V, L19V, M36I, R41K, L63T, H69K, I93L | C |
| Matthews (2008) | A010 | A010 | FJ199566 | None | | | | T12S, I15V, G16E, L19V, E35D, M36I, L63T, H69K, L89M, I93L | C |
| | PS007 | PS007 | FJ199589 | None | | | | T12S, K14R, I15V, L19I, E35D, N37E, R41K, D60E, L63T, C67Y, H69K, V77I, L89M | C |
| | PS028 | PS028 | FJ199609 | None | | | | T12S, I15V, L19V, E35D, M36I, R41K, D60E, L63T, H69K, L89M, I93L | C |
| | PS029 | PS029 | FJ199610 | None | | | | T12S, I15V, L19V, E35D, M36I, R41K, D60E, L63T, H69K, L89M, I93L | C |
| | PS050 | PS050 | FJ199631 | None | | | | T12S, I13V, I15V, G16E, L19I, M36I, R41K, L63T, I64M, H69K, L89M, I93L | C |
| | PS055 | PS055 | FJ199636 | None | | | | T12S, I15V, L19V, M36I, N37S, R41K, L63T, C67Y, H69K, L89M, I93L | C |
| | PS083 | PS083 | FJ199659 | None | | | | T12A, I15V, L19V, M36I, R41K, L63T, H69K, V82I, L89M, I93L | C |
| | PS105 | PS105 | FJ199679 | None | | | | T12S, L19I, N37S, R41K, L63T, H69K, T74S, L89M, I93L | C |
| | PS157 | PS157 | FJ199720 | None | | | | T12S, I15V, L19T, M36I, R41K, K45R, L63T, H69K, L89M, I93L | C |
| | PS189 | PS189 | FJ199747 | None | | | | T12S, L19I, M36I, L63T, H69K, L89M, I93L | C |
| | PS205 | PS205 | FJ199761 | None | | | | T12S, I15V, L19V, E35D, M36I, R41K, L63T, H69K, T74S, L89M, I93L | C |
| | PS210 | PS210 | FJ199766 | None | | | | L19T, K20R, E35D, M36I, R41K, L63T, H69K, L89M, I93L | C |
| | PS284 | PS284 | FJ199775 | None | | | | K14R, I15V, L19I, E35D, M36I, R41K, L63T, H69K, L89M, I93L | C |
| | PS356 | PS356 | FJ199781 | None | | | | T12S, L19I, E35D, N37S, R41K, L63T, H69K, V82I, L89M, I93L | C |
| | PS365 | PS365 | FJ199785 | None | | | | T12S, I15V, L19I, M36I, N37D, R41K, D60E, L63T, H69K, I93L | C |
| | PS367 | PS367 | FJ199786 | None | | | | T12S, I15V, L19V, E35D, M36I, R41K, L63T, H69K, T74A, L89M, I93L | C |
| | PS392 | PS392 | FJ199800 | None | | | | T12S, I15V, L19E, K20R, E35D, M36I, R41K, L63T, H69K, T74S, L89M, I93L | C |
| | PS418 | PS418 | FJ199821 | None | | | | T12S, K14R, I15V, L19V, M36I, R41K, L63T, H69K, T74S, L89M, I93L | C |
| | PS430 | PS430 | FJ199826 | None | | | | I15V, L19T, K20R, E35D, M36I, R41K, D60E, L63T, H69K, L89M, I93L | C |
| | PS452 | PS452 | FJ199838 | None | | | | T12P, I15V, L19I, E35D, M36I, N37T, R41K, L63T, H69K, L89M, I93L | C |
| | SK065 | SK065 | FJ199875 | None | | | | L5F, T12S, K14R, I15V, L19I, M36I, R41K, L63T, H69K, T74S, L89M, I93L | C |
| | SK084 | SK084 | FJ199885 | None | | | | T12S, I15V, L19I, E35D, M36I, N37S, R41K, L63T, H69K, L89M, I93L | C |
| | SK184 | SK184 | FJ199953 | None | | | | T12S, I15V, L19T, M36I, R41K, L63T, H69K, V82I, I93L | C |
| | SK214 | SK214 | FJ199970 | None | | | | T12S, I15V, L19I, E35D, M36I, R41K, L63T, H69K, I93L | C |
| | SK217 | SK217 | FJ199972 | None | | | | T12S, I15V, L19I, M36I, R41K, L63T, H69K, I93L | C |
| | SK237 | SK237 | FJ199984 | None | | | | T12S, K14R, I15V, L19I, M36I, R41K, L63T, H69K, L89M, I93L | C |
| Ndembi (2008) | IAEAM020 | IAEAM020 | EU306757 | None | | | | T12S, I15V, L19I, M36I, N37S, R41K, L63T, H69K, K70R, L89M, I93L | C |
| Nyombi (2008) | TBK006 | TBK006 | EU251719 | None | | | | T12S, I15V, L19I, M36I, R41K, L63T, H69K, I93L | C |
| | TBK096 | TBK096 | EU251778 | None | | | | T12S, G16E, L19V, M36I, N37K, R41N, L63T, H69K, L89M, I93L | C |
| | TMS125 | TMS125 | EU251824 | None | | | | T12S, K14R, I15V, M36I, N37K, R41N, D60E, I62V, L63T, H69K, V82I, L89M, I93L | C |
| | TMS211 | TMS211 | EU251847 | None | | | | T12S, I15V, G16E, L19I, M36I, R41K, L63T, H69K, I93L | C |
| Pillay (2008) | DR70 | DR70 | AY589919 | None | | | | T12S, I15V, L19I, E35D, M36I, R41K, L63T, H69K, L89M, I93L | C |
| | DR82 | 03ZA.DR82 | AY589926 | None | | | | L10LI, T12S, I15V, G16GE, L19I, M36I, R41K, L63T, H69K, I93L | C |
| Riddler (2008) | RG9485 | RG9485w-6 | | None | | | | T4TN, T12S, I15V, L19I, M36I, L63T, H69K, I93L | C |
| Somi (2008) | OY-05-275 | OY-05-275 | | None | | | | I15V, L19I, M36I, N37D, R41K, L63T, H69K, I93L | C |
| Ayouba (2009) | 2909 | 2909HALDPR | GQ351949 | None | | | I47IM | T12S, G17D, L19I, K20R, M36I, R41K, L63T, E65D, H69K, L89M, I93L | C |
| Bartolo (2009) | HDP68 | 01AOHDP68 | EU068240 | None | | | | T12S, I15V, L19V, M36I, N37S, R41K, L63T, H69K, L89M, I93L | C |
| | HDP69 | 01AOHDP69 | EU068241 | None | | | | T12S, I15V, L19V, M36I, N37S, R41K, L63T, H69K, L89M, I93L | C |
| | HJM115 | 01AOHJM115 | EU068253 | None | | | | T12N, K14R, I15V, E35D, M36I, R41K, K45R, L63T, H69K, L89M, I93L | C |
| Cuevas (2009) | P1074 | P1074.1 | EU822552 | None | | | | I15V, G16E, M36I, N37NS, L63T, H69K, V82I, L89M, I93L | C |
| de Sa-Filho (2009) | 58916 | 58916Ith | GQ294616 | None | | | | M36I, N37K, R41N, L63T, H69K, I93L | C |
| Eshleman (2009) | A09917B6 | 07-156882 | FJ389056 | None | | | | I13V, K20R, M36I, N37K, R41N, L63T, H69K, L89I, I93L | C |
| Hosseinipour (2009) | 9314 | 9314 | GQ228226 | None | | | | T12S, I15V, L19I, M36MI, R41K, D60E, L63T, I64L, H69K, L89M, I93L | C |
| | 9335 | 9335 | GQ228228 | None | | | | K14N, L19IT, K20R, M36I, R41K, Q61DN, L63T, E65D, H69K, I93L | C |
| | 9395 | 9395 | GQ228239 | None | | | | Q7K, I15V, L19I, M36I, R41K, L63T, H69K, T74S, L89M, I93L | C |
| | 9300 | 9300 | GQ228251 | None | | | | L10I, K14N, I15V, L19I, M36I, L63T, H69K, I93L | C |
| | 9301 | 9301 | GQ228252 | None | | | | K14N, I15V, G16GE, L19I, K20R, M36I, I62V, L63T, I64L, H69K, I93L | C |
| | 9433 | 9433 | GQ228273 | None | | | | T12S, L19I, N37C, R41K, L63T, H69K, T74S, V77I, L89M, I93L | C |
| Iqbal (2009) | 100075 | 100075 | EU449541 | None | | | | T12S, K14R, I15V, L19I, M36V, R41K, L63T, H69K, L89M, I93L | C |
| | 100113 | 100113 | EU449544 | None | | | | T12P, K14R, L19I, M36I, R41K, L63T, H69K, L89M, I93L | C |
| | 100693 | 100693 | EU449552 | None | | | | T12P, K14R, L19I, M36L, N37S, L63T, H69K, L89M, I93L | C |
| Kandathil (2009) | VL05_114 | VL05_114 | EU110055 | None | | | | T12A, I15V, L19T, M36I, R41K, L63T, H69K, V82I, I93L | C |
| | VL05_119 | VL05_119 | EU110058 | None | | | | T12S, K14R, I15V, G16E, L19T, M36I, R41K, L63T, H69K, L89M | C |
| | VL06_042 | VL06_042 | EU110069 | None | | | | T12S, I15V, L19I, M36I, R41K, L63T, C67X, H69K, L89M, I93L | C |
| | VL06_075 | VL06_075 | EU110072 | None | | | | T12S, I15V, L19T, M36I, R41K, L63T, H69K, T74S, I93L | C |
| | VL07_284 | VL07_284 | EU683753 | None | | | | T12S, I15V, G16E, L19I, M36I, R41K, Q61N, L63T, H69K, K70R, I72V, I93L | C |
| | VL07_263 | VL07_263 | EU683755 | None | | | | T12S, I15V, G16E, L19I, M36I, R41K, Q61N, L63T, H69K, K70R, I72V, Q92R, I93L | C |
| | VL07_237 | VL07_237 | EU683763 | None | | | | K14R, I15V, M36I, N37S, R41K, L63T, H69K, V82I, L89M, I93L | C |
| Kandathil (2009) | CD06_481 | CD06_481 | EU683784 | None | | | | I15V, G16E, L19I, M36V, R41K, L63T, H69K, I93L | C |
| | VL06_139 | VL06_139 | EU744914 | None | | | | T12S, I15V, L19T, K20R, M36I, R41K, L63T, H69K, L89M, I93L | C |
| | VL07_231 | VL07_231 | EU683761 | None | | | | T12S, I15V, L19I, M36L, R41K, K45R, L63T, H69K, T74A, L89M, I93L | C |
| | CD06_420 | CD06_420 | EU683772 | None | | | | L10I, T12S, I15V, L19I, M36I, R41K, K45Q, L63T, I72T, I93L | C |
| | CD06_469 | CD06_469 | EU683776 | None | | | | T12S, I15V, L19I, M36I, R41K, L63T, H69K, I93L | C |
| Kousiappa (2009) | CY004 | CY004 | EU673374 | None | | | | T12S, L19I, M36I, P39S, R41K, L63T, H69K, L89M, I93L | C |
| Orrell (2009) | GT4437 | GT44372006 | | None | | | | T12S, I15S, L19Q, K20R, M36I, N37D, R41K, L63T, C67F, H69K, V77I, I93L | C |
| Rajesh (2009) | N26 | TRCNPR26 | FJ595389 | None | | | | T12S, I15V, G16GE, L19I, M36I, R41K, L63T, H69K, I93L | C |
| | N31 | TRCNPR31 | FJ595394 | None | | | | T12S, I15V, L19I, M36I, R41K, L63T, H69K, L89M, I93L | C |
| | N42 | TRCNPR42 | FJ595405 | None | | | | T12S, I15V, L19IT, M36I, R41K, L63T, H69K, I93L | C |
| | N52 | TRCNPR52 | FJ595415 | None | | | | T12S, I15V, L19I, M36I, R41K, L63T, H69K, L89M, I93L | C |
| | N54 | TRCNPR54 | FJ595417 | None | | | | T12S, I15V, L19I, M36I, R41K, Q58QK, L63T, H69K, L89M, I93L | C |
| | N68 | TRCNPR68 | FJ595431 | None | | | | T12S, I13V, I15V, L19I, M36IV, R41K, D60E, L63T, I64M, H69K, L89M, I93L | C |
| | N83 | TRCNPR83 | FJ595446 | None | | | | T12S, I15V, L19I, M36I, R41K, Q58QK, L63T, H69K, L89M, I93L | C |
| Vercauteren (2009) | pt1953 | 1545062602 | GQ399071 | None | | | | T12P, I15V, L19I, M36I, N37S, R41K, Q61E, L63T, I64M, H69K, L89M, I93L | C |
| | pt1772 | 2701055520 | GQ399252 | None | | | | T12S, I15V, L19I, E35D, M36I, R41K, K45R, L63T, E65D, H69K, L89M, I93L | C |
| | pt1560 | 3982391827 | GQ399464 | None | | | | T12S, I15V, G16A, L19I, M36I, N37K, R41N, L63T, H69K, I93L | C |
| | pt1143 | 6293822780 | GQ399881 | None | | | | W6WR, K14E, E21EK, D29V, M36I, R41K, I62V, L63T, H69K, L89M, I93L | C |
| | pt960 | 7476744160 | GQ400064 | None | | | | T12S, K14R, I15V, L19T, M36I, R41K, L63T, H69K, V82I, L89M, I93L | C |
| | pt870 | 7995369546 | GQ400154 | None | | | | T12S, L19I, E35D, M36I, R41K, D60E, L63T, H69K, V77VG, L89M, I93L, T96TP | C |
| | pt736 | 8717655720 | GQ400288 | None | | | | T12P, I15V, G16E, L19T, E35D, M36I, N37NS, L63T, H69K, T74S, L89LM, I93L | C |
| | pt685 | 8993553064 | GQ400339 | None | | | | T12S, I15V, G16E, L19I, M36I, R41K, L63T, H69K, T74A, L89M, I93L | C |
| | pt606 | 9367095088 | GQ400418 | None | | | | T12S, L19I, M36I, R41K, V56I, D60E, L63T, H69K, L89M, I93L | C |
| | pt596 | 9419471420 | GQ400428 | None | | | | I15IV, L19I, M36I, R41K, L63T, H69K, V82I, I93L | C |
| | pt560 | 9587387978 | GQ400464 | None | | | | T12S, I15V, G17GD, L19I, M36I, R41K, L63T, H69K, T74A, L89M, I93L | C |
| | pt523 | 9766808119 | GQ400501 | None | | | | P1PS, T12S, I15V, G16E, K20R, M36I, R41K, K43KN, I62IV, L63T, H69K, I93L | C |
| | pt497 | 9959859900 | GQ400527 | None | | | | T12P, I15V, G16E, L19T, E35D, M36I, L63T, H69K, T74S, L89M, I93L | C |
| | pt439 | ctpQGHdj8e | GQ400585 | None | | | | T12PS, I15V, E35D, M36I, N37K, R41N, L63T, H69K, T74S, L89M, I93L | C |
| | pt342 | IqebD7pmBr | GQ400682 | None | | | | L10I, T12S, I15V, L19I, M36I, N37S, R41K, L63T, H69Q, L89M, I93L | C |
| | pt208 | pfvo5PpoMp | GQ400816 | None | | | | L10V, I13V, I15V, G16E, K20R, M36I, R41K, L63T, I64IL, H69K, I93L | C |
| | pt44 | xS9new0jWp | GQ400980 | None | | | | I13V, I15V, L19I, K20R, M36I, N37NS, P39PL, R41K, I62V, L63T, E65D, H69K, L89M, I93L | C |
| | pt30 | YH1xmA932i | GQ400994 | None | | | | V11F, T12S, I15V, M36I, R41K, Q61E, L63T, H69K, L89M, I93L | C |
| Wallis (2009) | TJC2387254 | TJC2387254 | | None | | | | T12S, I15V, L19I, M36I, L63T, H69K, L89LM, I93L | C |
| | TJC2382730 | TJC2382730 | | None | | | | I15V, G16E, L19T, E35D, M36I, R41K, K45R, R57K, D60E, L63T, H69K, I93L | C |
| | TJC2381559 | TJC2381559 | | None | | | | L19I, M36I, R41K, Q61D, L63T, I64L, H69K, L89M, I93L | C |
| | 2361793 | 2361793 | | None | | | | T12S, I15V, L19T, K20R, E35D, M36I, R41K, L63T, H69K, T74S, L89M, I93L | C |
| | TJC2414872 | TJC2414872 | | None | | | | T12S, I15V, L19I, M36I, R41K, D60E, L63T, H69K, L89M, I93L | C |
| | GP60765845 | GP60765845 | | None | | | | T12S, I15V, L19I, E35D, M36I, P39Q, R41K, I62V, L63T, H69K, T74S, L89M, I93L | C |
| | TJC2395685 | TJC2395685 | | None | | | | K14I, L19KT, K20R, E35D, M36I, R41K, K45R, L63T, H69K, I72IT, L89LM, I93L | C |
| | TJC2373510 | TJC2373510 | | None | | | | T12S, I15V, L19I, M36I, R41K, D60E, I62V, L63T, I64M, H69K, L89M, I93L | C |
| | TJC2379522 | TJC2379522 | | None | | | | T12S, I15V, L19I, E35D, M36I, R41K, R57K, L63T, H69K, I93L | C |
| | GT00131322 | GT00131322 | | None | | | | T12S, K14R, I15V, L19T, M36I, N37NS, L63T, H69K, V82I, L89M, I93L | C |
| | TJC2422791 | TJC2422791 | | None | | | | T12S, I15V, L19I, M36I, R41K, L63T, H69K, I93L | C |
| | 2349317 | 2349317 | | None | | | | G17D, L19T, K20R, E35EK, M36I, P39Q, R41K, L63T, H69K, L89M, I93L | C |
| | GT00103258 | GT00103258 | | None | | | | L10I, T12S, I15V, L19I, M36I, R41K, L63T, C67Y, H69K, T74S, L89M | C |
| | TJC2381560 | TJC2381560 | | None | | | | L19I, M36I, R41K, Q61D, L63T, I64L, H69K, L89M, I93L | C |
| Bonura (2010) | 1173_36 | 1173_36 | GU969538 | None | | | | T12P, K14R, I15V, G16E, M36I, R41K, D60E, Q61K, L63T, H69K, L89M, I93L | C |
| | 1223_116 | 1223_116 | GU969560 | None | | | | L10V, I15V, G16GE, M36T, N37K, R41N, L63T, H69K, L89I, I93L | C |
| | 1240_146 | 1240_146 | GU969571 | None | | | | T12S, K14R, I15V, M36I, N37K, R41N, L63T, H69K, L89M, I93L | C |
| Chaturbhuj (2010) | 1-006 | 1-006 | FJ878938 | None | | | | T12S, K14R, L19V, M36I, N37T, R41K, L63T, H69K, T74S, L89M, I93L | C |
| | 1-009 | 1-009 | FJ878940 | None | | | | T12A, K14R, I15V, L19I, M36I, R41K, L63T, H69K, L89M, I93L | C |
| | 2-001 | 2-001 | FJ878947 | None | | | | T12S, I15V, L19T, M36I, N37T, R41K, L63T, H69K, V82VI, L89M, I93L | C |
| | 2-006 | 2-006 | FJ878952 | None | | | | T12S, I15V, L19I, M36I, R41K, D60E, L63T, H69K, L89M, I93L | C |
| Djoko (2010) | 625 | CD2644 | FR666625 | None | | | | T12S, I15IV, L19IM, M36T, N37D, R41K, L63T, H69K, V77I, L89M, I93L | C |
| | 658 | CD0729 | FR666658 | None | | | | I13IV, K14I, I15V, L19Q, K20R, M36I, N37S, R41K, L63T, H69K, L89M, I93L | C |
| Germanaud (2010) | 5626 | 5626 | | None | | | | T12S, I15V, L19I, M36I, R41K, L63T, H69K, T74S, L89M, I93L | C |
| Gonzalez (2010) | 1546 | 1546_M25m | GQ427128 | None | | | | T12S, I15V, L19I, M36I, L63T, H69K, L89M, I93L | C |
| | KP8 | KP8 | GQ433829 | None | | | | T12S, I15V, L19I, M36I, R41K, L63T, H69K, T74S, I93L | C |
| | LUK4 | LUK4 | GQ433852 | None | | | | T12S, I15V, L19V, K20R, M36I, R41K, L63T, H69K, L89M, I93L | C |
| | 1343_M00m | 1343_M00m | GQ427120 | None | | | | T12S, G17D, L19I, M36I, R41K, D60E, Q61E, L63T, H69K, L89M, I93L | C |
| | 1770_M00m | 1770_M00m | GQ427132 | None | | | | I15V, L19I, M36L, N37C, R41K, L63T, H69K, V82I, L89M, I93L | C |
| | 2130_M00m | 2130_M00m | GQ427138 | None | | | | T12S, I15V, L19I, M36I, R41K, L63T, H69K | C |
| | 2175_M00m | 2175_M00m | GQ427139 | None | | | | T12S, I15V, L19I, K20R, E35D, M36I, R41K, L63T, H69K, L89M, I93L | C |
| | KLesa2 | KLesa2 | GQ433820 | None | | | | T12S, I15G, L19V, M36I, N37S, R41K, L63T, H69K, L89M, I93L | C |
| | KLesa3 | KLesa3 | GQ433821 | None | | | | T12S, I13V, I15V, G16E, L19V, K20R, M36I, P39Q, R41K, L63T, H69R, I72V, T74S, L89M, I93L | C |
| | KZ2 | KZ2 | GQ433840 | None | | | | T12S, I15V, L19I, M36I, N37S, R41K, D60E, Q61E, L63T, H69K, L89M, I93L | C |
| | LUC2 | LUC2 | GQ433846 | None | | | | T12S, K14R, L19T, K20R, E35D, M36I, R41K, L63T, H69K, L89M, I93L | C |
| | LUK5 | LUK5 | GQ433853 | None | | | | L19I, M36I, R41K, L63T, H69K, T74S, V77I, L89M, I93L | C |
| | LV6 | LV6 | GQ433861 | None | | | | T12S, I15V, L19T, M36I, R41K, L63T, H69K, T74S, L89M, I93L | C |
| | SO_7 | SO_7 | GQ433891 | None | | | | K14E, I15V, G16E, L19T, M36I, R41K, K45R, D60E, Q61K, L63T, H69K, L89I, I93L | C |
| Hamers (2010) | 300021 | CP076300021 | HM119617 | None | | | | T12S, I15V, L19V, K20R, M36I, R41K, K43R, L63T, I64L, H69K, L89M, I93L | C |
| | 300032 | CP076300032 | HM119626 | None | | | | T12S, I15V, L19T, M36I, R41K, L63T, H69K, T74A, L89M, I93L | C |
| | 300049 | CP076300049 | HM119641 | None | | | | T12S, I15V, L19I, M36I, R41K, K43R, L63T, H69K, L89M, I93L | C |
| | 300055 | CP076300055 | HM119645 | None | | | | Q2S, T12S, I15V, G16E, L19I, M36I, R41K, L63T, H69K, I72IT, I93L | C |
| | 300060 | CP076300060 | HM119649 | None | | | | L10I, I15V, L19T, K20R, M36I, R41K, L63T, H69K, L89M, I93L | C |
| | 300113 | CP076300113 | HM119690 | None | | | | G17D, M36I, L63T, H69K, L89M, I93L | C |
| | 300126 | CP076300126 | HM119703 | None | | | | T12N, K14I, I15V, L19I, K20R, E35D, M36I, N37E, R41K, L63T, E65D, H69K, I72V, L89M, I93L | C |
| | 300153 | CP076300153 | HM119728 | None | | | | T12S, I15V, L19I, K20R, M36I, N37D, L63T, H69K, T74S, V75I, L89M, I93L | C |
| | 300164 | CP076300164 | HM119739 | None | | | | T12S, K20R, E35D, M36I, R41K, K45R, Q61QE, L63T, H69K, T74TA, L89M, I93L | C |
| | 300175 | CP076300175 | HM119748 | None | | | | M36I, P39T, R41K, I62V, L63T, H69K, I93L | C |
| | 300206 | CP076300206 | HM119775 | None | | | | L10M, L19I, M36I, R41K, L63T, H69K, L89M, I93L | C |
| | 300221 | CP076300221 | HM119789 | None | | | | T12S, I15V, L19I, M36I, R41K, L63T, H69K, T74TA, L89M, I93L | C |
| | 300222 | CP076300222 | HM119790 | None | | | | Q2S, T12S, I15V, L19I, M36I, R41K, L63T, H69K, I72IV, T74A, L89M, I93L | C |
| | 300229 | CP076300229 | HM119795 | None | | | | T12X, I15V, L19T, K20R, E35D, M36I, L63T, H69K, I72IT, T74S, L89M, I93L | C |
| | 300287 | CP076300287 | HM119820 | None | | | | T12S, I15V, L19I, E35D, M36I, R41K, I62V, L63T, H69K, T74A, L89M, I93L | C |
| | 300290 | CP076300290 | HM119823 | None | | | | L10V, I15V, G16E, L19I, K20R, M36L, N37S, R41K, L63T, I64IV, H69K, I93L | C |
| | 300299 | CP076300299 | HM119827 | None | | | | I15V, L19T, M36I, R41K, Q61QH, L63T, H69K, L89LM, I93L | C |
| | 300406 | CP076300406 | HM119833 | None | | | | T12S, I15V, L19IT, K20R, E35Q, M36I, N37D, R41K, R57RK, L63T, H69K, I93L | C |
| | 300429 | CP076300429 | HM119853 | None | | | | I15V, L19I, M36I, R41K, L63T, H69K, T74S, L89M, I93L | C |
| | 300479 | CP076300479 | HM119898 | None | | | | L10I, I15V, L19T, M36I, N37K, R41N, L63T, H69K, I93L | C |
| | 300491 | CP076300491 | HM119910 | None | | | | L5X, I13V, I15V, L19I, M36I, N37S, R41K, L63T, H69K, L89M, I93L | C |
| | 300497 | CP076300497 | HM119916 | None | | | | T12S, I15V, L19I, E35D, M36I, R41K, L63T, H69K, T74S, L89M, I93L | C |
| | 300510 | CP076300510 | HM119927 | None | | | | T12S, K14R, I15V, L19T, K20R, E35D, M36I, N37D, R41K, L63T, H69K, T74A, L89LM, I93L | C |
| | 300518 | CP076300518 | HM119935 | None | | | | K14R, I15V, L19LI, E35D, M36I, N37D, R41K, L63T, H69K, I72IM, T74S, L89M, I93L | C |
| | 300532 | CP076300532 | HM119948 | None | | | | K14R, I15V, Q18QE, E35D, M36I, R41K, D60E, L63T, H69K, L89M, I93L | C |
| | 300552 | CP076300552 | HM119962 | None | | | | L10I, T12S, I15V, G16E, L19V, E35D, M36I, R41K, L63T, H69Q, L89M, I93L | C |
| | 300554 | CP076300554 | HM119964 | None | | | | I13V, I15V, K20R, M36I, P39Q, R41K, Q61D, L63T, H69K, I72V, T74S, L89M, I93L | C |
| | 300578 | CP076300578 | HM119982 | None | | | | L5X, T12S, I15V, L19I, K20R, E35D, M36I, R41K, L63T, H69K, L89M, I93L | C |
| | 300586 | CP076300586 | HM119988 | None | | | | I15V, L19LI, K20R, E35D, M36I, R41K, L63T, H69K, L89M, I93L | C |
| | 300599 | CP076300599 | HM120000 | None | | | | T12S, I15V, L19I, K20R, E35D, M36I, R41K, L63T, H69K, L89M, I93L | C |
| | 300610 | CP076300610 | HM120011 | None | | | | T12S, I15V, G16E, L19I, E35D, M36I, R41K, D60E, I62IV, L63T, H69K, R87RK, I93L | C |
| | 300629 | CP076300629 | HM120027 | None | | | | K14KR, I15V, G17GD, L19LI, M36I, N37ND, R41K, L63T, H69K, V82VI, L89LM, I93L | C |
| | 300633 | CP076300633 | HM120030 | None | | | | I15V, G16E, E35D, M36I, R41K, K45R, Q61E, L63T, I64M, H69K, K70R, I72V, L89M, I93L | C |
| | 300634 | CP076300634 | HM120031 | None | | | | T12S, I15V, L19I, E35D, M36I, R41K, K45R, D60E, L63T, H69K, L89M, I93L | C |
| | 300645 | CP076300645 | HM120041 | None | | | | I13V, I15V, K20R, M36I, R41K, L63T, H69K, L89M, I93L | C |
| | 300668 | CP076300668 | HM120059 | None | | | | T12TP, I15V, L19I, M36I, R41K, L63T, H69K, T74A, L89M, I93L | C |
| | 300682 | CP076300682 | HM120071 | None | | | | I15V, L19T, M36I, R41K, L63T, H69K, T74S, L89M, I93L | C |
| | 300684 | CP076300684 | HM120072 | None | | | | T12S, I15V, L19I, M36I, R41K, D60E, L63T, H69K, L89M, I93L | C |
| | 300695 | CP076300695 | HM120080 | None | | | | T12S, L19I, M36I, R41K, L63T, H69K, T74S, L89M, I93L | C |
| | 302386 | CP076302386 | HM120099 | None | | | | T12S, I15V, L19T, K20R, M36I, R41K, D60E, Q61E, I62IV, L63T, H69K, L89M, I93L | C |
| | 302400 | CP076302400 | HM120106 | None | | | | K14KR, I15V, L19V, M36I, R41K, L63T, H69K, L89LM, I93L | C |
| | 302410 | CP076302410 | HM120110 | None | | | | G17D, L19I, K20IMR, E35D, M36IL, N37K, R41RK, R57RK, L63T, H69K, T74S, L89M, I93L | C |
| | 302423 | CP076302423 | HM120118 | None | | | | T12TS, K14KR, L19I, M36I, R41K, L63T, H69K, T74S, L89M, I93L | C |
| | 302424 | CP076302424 | HM120119 | None | | | | T12TS, I15V, G16GE, L19I, M36I, R41K, L63T, H69K, L89LM, I93L | C |
| | 302438 | CP076302438 | HM120125 | None | | | | I15V, L19LI, E35D, M36I, R41K, L63T, H69K, T74S, L89M, I93L | C |
| | 302448 | CP076302448 | HM120131 | None | | | | T12S, I15V, G16E, L19T, E35D, M36I, L63T, H69K, T74S, L89M, I93L | C |
| | 303962 | CP076303962 | HM120147 | None | | | | T12S, I13V, I15V, L19T, K20R, M36I, N37X, P39PS, R41RK, L63T, H69K, K70KT, L89M, I93L | C |
| | 303967 | CP076303967 | HM120148 | None | | | | K14I, I15IV, L19Q, K20R, M36I, N37K, R41K, L63T, H69K, L89M, I93L | C |
| Papathanasopoulos (2010) | 17212 | 07ZA17212 | GU253398 | None | | | | M36I, R41K, K45KR, Y59N, D60E, I62V, L63T, H69K, V82VI, N88K, L89LIM, I93L | C |
| | 17067 | 06ZA17067 | GU253397 | None | | | | T12S, I15V, L19I, K20KR, M36I, P39V, R41K, D60E, Q61E, I62V, L63T, H69KR, L89LM, I93L | C |
| Rodrigues (2010) | 308_07 | BR07SC308 | GQ401317 | None | | | | I15V, L19Q, M36I, N37K, R41N, D60E, L63T, H69K, L89M, I93L | C |
| Tymchuck (2010) | MW10 | MW10 | HM744720 | None | | | Q58E | T12S, I15V, G16E, L19I, M36I, R41K, K43R, D60E, Q61E, L63T, E65D, H69K, L89M, I93L | C |
| | MW12 | MW12 | HM744721 | None | | | | T12S, I15V, G16E, L19I, M36I, L63T, H69K, T74S, V77I, L89M, I93L | C |
| Wright (2010) | 184 | SK184 | HM593191 | None | | | | T12S, I15V, L19T, M36I, R41K, L63T, H69K, V82I, I93L | C |
| | 186 | SK186 | HM593193 | None | | | | L19I, E34Q, M36I, P39Q, R41N, L63T, H69K, L89M, I93L | C |
| | 217 | SK217 | HM593225 | None | | | | T12S, I15V, L19I, M36I, R41K, L63T, H69K, I93L | C |
| | 237 | SK237 | HM593243 | None | | | | T12S, K14R, I15V, L19I, M36I, R41K, L63T, H69K, L89M, I93L | C |
| | 241 | SK241 | HM593246 | None | | | | T12S, I15V, L19I, M36I, R41K, L63T, H69K, I93L | C |
| | 263 | SK263 | HM593267 | None | | | | T12S, L19I, K20R, E35D, M36I, R41K, L63T, H69K, T74S, L89M, I93L | C |
| | 270 | SK270 | HM593274 | None | | | | T12S, I15V, Q18H, L19I, M36I, N37T, R41K, Q61N, L63T, H69K, T74S, L89M, I93L | C |
| | 319 | SK319 | HM593323 | None | | | | T12TS, K14KR, I15IV, L19T, K20R, M36I, R41K, L63T, H69K, L89M, I93L | C |
| | 339 | SK339 | HM593344 | None | | | | T12TS, I15V, G16GE, L19T, K20KR, E35DN, M36I, N37ND, R41K, L63T, E65ED, H69K, T74S, L89M, I93L | C |
| | 369 | SK369 | HM593375 | None | | | | T12S, I15V, L19I, E35D, M36I, R41K, L63T, E65EK, H69K, T74S, L89M, I93L | C |
| | 383 | SK383 | HM593389 | None | | | | T12TS, I15V, L19I, E35D, M36I, R41K, R57RK, L63T, H69K, K70Q, L89M, I93L | C |
| | 398 | SK398 | HM593403 | None | | | | K14R, I15IV, L19I, E35D, M36I, R41K, L63T, H69K, V82I, L89M, I93L | C |
| | 4 | SK4 | HM593405 | None | | | | T12S, I15V, G16GE, L19IV, E35D, M36I, R41K, L63T, H69K, I72IT, T74S, L89M, I93L | C |
| | 401 | SK401 | HM593408 | None | | | | I15V, M36I, R41K, L63T, H69K, T74S, L89M, I93L | C |
| | 417 | SK417 | HM593425 | None | | | | T12S, K14R, I15V, L19I, M36I, R41K, L63T, H69K, L89M, I93L | C |
| Bussmann (2011) | B0727 | B0727 | JQ617014 | None | | | | I15V, L19I, M36I, R41K, L63T, I64M, H69K, L89M, I93L | C |
| | B0613 | B0613 | JQ617101 | None | | | | I15V, L19T, E35D, M36I, R41K, K45R, L63T, H69K, L89M, I93L | C |
| | B0625 | B0625 | JQ617107 | None | | | | I15V, L19I, M36I, R41K, D60E, L63T, H69K, I93L | C |
| | B0650 | B0650 | JQ617116 | None | | | | M36I, R41K, K45KR, D60DE, Q61QDEH, L63T, H69K, T74TS, L89M, I93L | C |
| | B0672 | B0672 | JQ617127 | None | | | | I15V, L19I, E35D, M36I, N37E, R41K, R57K, D60E, L63T, H69K, A71T, I72T, I93L | C |
| de Medeiros (2011) | Pat056 | RS106 | JF487885 | None | | | | I3T, I15IV, K20KR, M36I, N37K, R41N, L63T, H69K, V82I, L89M, I93L | C |
| Deshpande (2011) | Pat014 | in1071 | JF414457 | None | | | | T12S, K14R, I15V, G16E, L19I, M36V, R41K, Q61H, L63T, I64IL, H69K, L89M, I93L | C |
| | Pat004 | in1025 | JF414466 | None | | | | T12S, G16E, L19V, M36L, N37S, L63T, H69K, V82I, L89M, I93L | C |
| Graf (2011) | SC15 | SC15 | JF773994 | None | | | | K14R, I15V, L19I, M36I, N37K, R41N, L63T, H69K, I93L | C |
| | SC38 | SC38 | JF774005 | None | | | | L10I, I15V, M36T, N37K, R41N, L63T, C67G, H69K, L89I, I93L | C |
| | SC77 | SC77 | JF774027 | None | | | L76I | I15V, M36I, N37K, R41N, K45R, L63T, H69K, L89M, I93L | C |
| | SC126 | SC126 | JF774050 | None | | | | L10I, K14R, I15V, K20R, M36I, N37K, R41N, K45R, L63T, C67E, H69K, L89M, I93L | C |
| Green (2011) | 707PKE04F | 707PKE04F | HM623496 | None | | | | I15V, L19V, M36I, R41K, L63T, H69K, T74S, L89M, I93L | C |
| Hamers (2011) | CP076301539 | CP076301539 | HQ993582 | None | | | | T12S, I15V, L19V, M36I, N37K, R41N, L63T, H69K, V82I, I93L | C |
| | CP076301548 | CP076301548 | HQ993591 | None | | | Q58E | T12S, L19IT, K20R, M36I, L63T, H69K, L89M, I93L | C |
| | CP076301554 | CP076301554 | HQ993597 | None | | | | T12S, I15V, L19I, M36L, R41HN, L63T, H69K, L89M, I93L | C |
| | CP076301704 | CP076301704 | HQ993699 | None | | | | T12S, I15V, L19I, M36I, N37K, R41N, L63T, H69K, I72IM, T74S, L89M, I93L | C |
| | CP076301707 | CP076301707 | HQ993702 | None | | | | R8RG, T12S, I13X, I15V, L19IT, M36I, N37K, R41N, L63T, H69K, T74S, L89M, I93L | C |
| | CP076301763 | CP076301763 | HQ993750 | None | | | | T12P, L19I, K20R, M36I, N37K, R41N, Q61H, L63T, H69K, L89M, I93L | C |
| | CP076301668 | CP076301668 | HQ993801 | None | | | | I15V, L19M, K20R, M36IL, R41K, L63T, H69K, V77I, L89M, I93L | C |
| | CP076302302 | CP076302302 | HQ993849 | None | | | | T12P, K14KR, I15V, G16E, M36I, R41K, L63T, H69K, I93L | C |
| | CP076304175 | CP076304175 | HQ993891 | None | | | | I15V, M36I, R41K, L63T, H69K, V82I, L89M, I93L | C |
| | CP076304247 | CP076304247 | HQ993937 | None | | | | T12S, I15V, L19I, N37K, R41N, L63T, H69K, T74S, V77I, L89M, I93L | C |
| | CP076304248 | CP076304248 | HQ993938 | None | | | | T12AS, I15IV, L19IV, N37K, R41N, L63T, H69K, T74S, V77I, L89M, I93L | C |
| | CP076303154 | CP076303154 | HQ994175 | None | | | | T12S, I15V, L19IV, M36I, N37S, R41K, L63T, H69K, I93L | C |
| | CP076303168 | CP076303168 | HQ994186 | None | | | | T12S, I15V, L19I, M36I, R41K, L63T, H69K, I93L | C |
| | CP076303179 | CP076303179 | HQ994195 | None | | | | T12S, I15IV, L19T, M36I, R41K, R57K, L63T, H69K, A71T, I93L | C |
| | CP076303193 | CP076303193 | HQ994205 | None | | | | T12S, I15V, L19V, M36I, R41K, L63T, H69K, T74A, L89M, I93L | C |
| | CP076303215 | CP076303215 | HQ994223 | None | | | | T12S, I15V, L19IT, K20R, M36I, R41K, L63T, H69K, L89LM, I93L | C |
| | CP076303234 | CP076303234 | HQ994234 | None | | | | T12S, I15V, G16E, L19I, M36I, R41K, K45R, L63T, I64L, H69K, I72IV, L89M, I93L | C |
| | CP076303240 | CP076303240 | HQ994239 | None | | | | I15V, L19I, M36L, R41K, L63T, H69K, I93L | C |
| | CP076303245 | CP076303245 | HQ994242 | None | | | | T12S, L19IV, M36I, N37D, R41K, D60E, L63T, I64L, E65D, H69K, L89M, I93L | C |
| | CP076303248 | CP076303248 | HQ994245 | None | | | | T12S, I15V, L19V, M36I, R41K, L63T, H69K, T74A, L89M, I93L | C |
| | CP076303253 | CP076303253 | HQ994249 | None | | | | T12S, G16E, L19I, E35D, M36I, R41K, K45R, D60E, L63T, H69K, L89LM, I93L | C |
| | CP076303268 | CP076303268 | HQ994259 | None | | | | T12S, I15V, L19I, M36I, R41K, L63T, H69K, V82VI, I93L | C |
| | CP076303281 | CP076303281 | HQ994270 | None | | | | T12S, I15V, L19I, E35D, M36I, R41K, L63T, E65D, H69K, T74S, L89M | C |
| | CP076305029 | CP076305029 | HQ994275 | None | | | | T12S, I15V, L19I, E35D, M36I, R41K, D60E, L63T, H69K, L89M, I93L | C |
| | CP076305031 | CP076305031 | HQ994277 | None | | | | L10LV, K14KR, I15V, G16GE, L19I, M36I, N37S, R41K, L63T, H69K, I93L | C |
| | CP076305041 | CP076305041 | HQ994282 | None | | | | T12S, I15IV, L19I, E35D, M36I, R41K, L63T, H69K, T74S, L89M, I93L | C |
| | CP076305059 | CP076305059 | HQ994297 | None | | | | T12S, I15V, L19I, E35D, M36I, L63T, H69K, T74S, L89M, I93L | C |
| | CP076305070 | CP076305070 | HQ994304 | None | | | | T12S, I15V, L19I, E35D, M36I, L63T, H69K, T74S, L89M, I93L | C |
| | CP076305076 | CP076305076 | HQ994310 | None | | | | I15V, L19I, M36I, R41K, L63T, I64M, H69K, L89M, I93L | C |
| | CP076300303 | CP076300303 | HQ994354 | None | | | | R8X, T12S, I15V, L19I, K20R, E35D, M36I, L38X, R41K, Q61E, L63T, H69K, T74S, I93L | C |
| | CP076300330 | CP076300330 | HQ994368 | None | | | | T12S, I15V, L19I, M36I, L63T, H69K, L89M, I93L | C |
| | CP076300368 | CP076300368 | HQ994382 | None | | | | T12S, I15V, L19I, E35D, M36I, R41K, R57K, L63T, H69K, I93L | C |
| | CP076300385 | CP076300385 | HQ994392 | None | | | | I15V, L19I, M36I, N37S, R41K, L63T, H69K, L89M, I93L | C |
| | CP076300400 | CP076300400 | HQ994403 | None | | | | T12S, I15V, L19I, E35D, M36I, R41K, K45R, L63T, H69K, T74S, L89M, I93L | C |
| | CP076301428 | CP076301428 | HQ994405 | None | | | | T12S, I15V, L19IT, M36I, N37ND, R41RK, K45KR, D60DE, L63T, I64IL, H69K, L89LIM, I93L | C |
| | CP076301453 | CP076301453 | HQ994423 | None | | | | T12S, I15V, L19T, K20R, E35D, M36I, R41K, D60E, L63T, H69K, T74S, L89M, I93L | C |
| | CP076301456 | CP076301456 | HQ994426 | None | | | | T12S, I15V, L19T, K20R, E35D, M36I, N37ND, R41K, L63T, H69K, T74S, L89M, I93L | C |
| | CP076301469 | CP076301469 | HQ994435 | None | | | | T12S, I15V, L19T, E35N, M36I, R41T, D60E, Q61E, I62IV, L63T, H69K, L89M, I93L | C |
| | CP076301472 | CP076301472 | HQ994438 | None | | | | I15V, L19I, E35G, M36I, R41K, K55H, R57K, L63T, H69K, T74K, L89M, I93L | C |
| | CP076301484 | CP076301484 | HQ994445 | None | | | | T12S, I15V, L19I, K20R, M36I, P39S, R41K, I62IV, L63T, H69K, V82I, L89M, I93L | C |
| | CP076301508 | CP076301508 | HQ994458 | None | | | | L10LI, T12S, I15V, L19I, E35D, M36I, R41K, L63T, H69K, T74S, L89M, I93L | C |
| | CP076302102 | CP076302102 | HQ994476 | None | | | | T12S, I15V, L19T, M36I, R41K, L63T, H69K, T74S, L89M, I93L | C |
| | CP076302112 | CP076302112 | HQ994485 | None | | | | T12S, L19I, M36I, R41N, D60K, Q61D, I62V, L63T, H69K, L89M, I93L | C |
| | CP076302127 | CP076302127 | HQ994497 | None | | | | I15V, L19T, E35ED, M36I, R41K, L63T, H69K, T74S, V82VI, L89M, I93L | C |
| | CP076302133 | CP076302133 | HQ994502 | None | | | | T12S, I15V, L19I, E35N, M36I, N37D, R41K, K45KR, L63T, I66IM, H69K, T74S, L89M, I93L | C |
| | CP076300906 | CP076300906 | HQ994534 | None | | | | L10I, T12S, I15V, G16E, L19V, M36I, R41K, L63T, H69K, I93L | C |
| | CP076300913 | CP076300913 | HQ994538 | None | | | | T12S, I15V, L19I, M36I, R41K, L63T, H69K, L89I, I93L | C |
| | CP076301053 | CP076301053 | HQ994584 | None | | | | T12S, I15V, L19I, K20R, M36I, N37D, L63T, H69K, T74S, V75I, L89M, I93L | C |
| | CP076301063 | CP076301063 | HQ994588 | None | | | | L19I, M36I, R41K, D60E, L63T, H69K, L89M, I93L | C |
| | CP076301067 | CP076301067 | HQ994591 | None | | | | T12TS, I15V, L19T, N37S, R41K, L63T, H69K, T74TA, V77I, L89LM, I93L | C |
| | CP076301079 | CP076301079 | HQ994598 | None | | | | T12S, I15V, L19V, M36I, R41K, L63T, H69K, I93L | C |
| | CP763A03290 | CP763A03290 | HQ994614 | None | | | | L10IV, T12S, I15V, L19I, K20R, M36I, R41K, R57K, D60E, Q61E, L63T, E65D, H69K, L89M, I93L | C |
| | CP763A03309 | CP763A03309 | HQ994627 | None | | | | I15V, L19I, K20R, E35D, M36I, R41K, L63T, H69K, V82VI, L89M, I93L | C |
| | CP763A03311 | CP763A03311 | HQ994629 | None | | | Q58E | T12S, I15V, L19I, K20R, E35D, M36I, R41K, L63T, H69K, T74S, L89M, I93L | C |
| | CP763A03317 | CP763A03317 | HQ994634 | None | | | | I15V, L19I, M36L, R41K, L63T, H69K, V82I, L89M, I93L | C |
| | CP763A03390 | CP763A03390 | HQ994649 | None | | | | L10IV, T12S, I15V, L19I, K20R, M36I, R41K, R57K, D60E, Q61E, I62IV, L63T, E65D, H69K, L89M, I93L | C |
| | CP763A03398 | CP763A03398 | HQ994656 | None | | | | T12S, K14R, I15V, L19T, K20R, M36I, N37D, R41K, L63T, H69K, L89M, I93L | C |
| | CP763A03408 | CP763A03408 | HQ994663 | None | | | | T12S, I15V, L19I, K20R, E35D, M36I, N37D, L63T, H69K, I93L | C |
| | CP763A03432 | CP763A03432 | HQ994677 | None | | | | T12S, I15V, L19T, K20R, M36I, N37D, L63T, H69K, L89M, I93L | C |
| | CP763A03434 | CP763A03434 | HQ994679 | None | | | | T12S, I15V, L19T, K20R, E35D, M36I, R41K, L63T, H69K, L89M, I93L | C |
| | CP763A03669 | CP763A03669 | HQ994689 | None | | | | T12S, I15V, L19I, E35D, M36I, R41K, D60E, Q61E, L63T, H69K, L89M, I93L | C |
| | CP763A03677 | CP763A03677 | HQ994693 | None | | | | K14N, I15V, L19I, M36I, R41K, D60E, L63T, H69K, L89M, I93L | C |
| | CP763A04086 | CP763A04086 | HQ994697 | None | | | | W6G, R8G, T12S, I15V, G16E, L19I, M36I, D60DE, L63T, I66IV, H69K, T74S, V82VI, L89M, I93L | C |
| | CP076300952 | CP076300952 | HQ994725 | None | | | | G16E, L19I, K20R, M36I, L63T, H69K, V75I, V82VI, L89M, I93L | C |
| | CP076300965 | CP076300965 | HQ994731 | None | | | | T12S, I15V, L19I, M36I, R41K, L63T, H69K, T74A, L89M, I93L | C |
| | CP076301004 | CP076301004 | HQ994758 | None | | | | K14KR, I15IV, L19I, M36I, R41K, L63T, I64L, H69K, A71AV, V77I, L89LM, I93L | C |
| | CP076301006 | CP076301006 | HQ994759 | None | | | | T12S, I15V, L19T, K20R, M36I, R41K, L63T, H69K, T74S, V75I, L89M, I93L | C |
| | CP076301008 | CP076301008 | HQ994760 | None | | | | T12P, I15V, G16E, L19I, E35D, M36I, R41K, L63T, H69K, T74A, L89M, I93L | C |
| | CP076301028 | CP076301028 | HQ994770 | None | | | | T12S, I15V, L19V, K20R, E35D, M36I, R41K, L63T, H69K, I72V, T74S, L89M, I93L | C |
| | CP076301029 | CP076301029 | HQ994771 | None | | | | T12S, I15V, G16E, L19I, K20R, M36I, P39S, R41K, D60E, I62V, L63T, I64L, H69K, L89M, I93L | C |
| | CP076302639 | CP076302639 | HQ994786 | None | | | | T12S, I15V, L19I, M36I, R41K, L63T, H69K, L89M, I93L | C |
| | CP076302640 | CP076302640 | HQ994787 | None | | | | T12S, I15V, G17D, L19T, K20R, E35D, M36I, R41K, K45R, L63T, H69K, L89M, I93L | C |
| | CP076302641 | CP076302641 | HQ994788 | None | | | | T12TS, I15V, L19I, M36I, R41K, L63T, H69K, P79PA, L89M, I93L | C |
| | CP076302659 | CP076302659 | HQ994803 | None | | | | L19T, M36I, R41K, D60E, Q61QE, L63T, H69K, K70KR, L89M, I93L | C |
| | CP076302705 | CP076302705 | HQ994843 | None | | | | T12S, I15V, L19I, R41K, L63T, H69K, T74A, V77I, L89M, I93L | C |
| | CP076302731 | CP076302731 | HQ994867 | None | | | | I15V, L19I, K20R, M36I, R41K, L63T, H69K, V77I, I93L | C |
| | CP763A01785 | CP763A01785 | HQ994880 | None | | | | T12S, I15V, L19I, E35D, M36I, R41K, L63T, H69K, I93L | C |
| | CP763A03362 | CP763A03362 | HQ994899 | None | | | | T12S, I15V, L19V, E35D, M36I, R41K, L63T, H69K, T74S, L89M, I93L | C |
| | CP076300839 | CP076300839 | HQ995112 | None | | | | T12S, I15V, G16E, L19I, M36I, N37S, R41K, L63T, I64L, H69K, L89M, I93L | C |
| | CP076303066 | CP076303066 | HQ995246 | None | | | | L10I, T12S, I15V, G16E, L19I, M36I, R41K, L63T, H69K, I93L | C |
| Kasang (2011) | 2030 | 2030 | HM572407 | None | | | | T12S, I15V, L19I, M36I, R41K, L63T, H69K, I93L | C |
| | 32647 | 32647 | HM572411 | None | | | | T12S, I15V, L19I, M36I, R41K, K45KR, L63T, H69K, T74A, L89M, I93L | C |
| Manasa (2011) | 1000191 | 1000191 | JN664971 | None | | | | T12S, I15V, L19I, M36T, L63T, E65D, H69K, V82I, L89M, I93L | C |
| | 1001552 | 1001552 | JN664985 | None | | | | T12S, I15V, G16E, L19I, E35D, M36I, L63T, H69K, T74S, L89M, I93L | C |
| | 1002972 | 1002972 | JN664998 | None | | | | T12S, I15V, G16E, L19I, M36L, L63T, C67Y, H69K, T74S, L89M, I93L | C |
| | 1005091 | 1005091 | JN665014 | None | | | | T12S, L19V, M36I, R41K, L63T, H69K, T74S, L89M, I93L | C |
| | 1008486 | 1008486 | JN665026 | None | | | | T12TP, I15V, L19T, M36I, N37S, L63T, H69K, L89M, I93L | C |
| | 1009132 | 1009132 | JN665031 | None | | | | T12P, I15V, L19I, M36I, R41K, L63T, H69K, T74A, L89M, I93L | C |
| | 1009148 | 1009148 | JN665033 | None | | | | T12S, K14I, I15V, L19I, M36I, N37S, L63T, H69K, V82I, L89M, I93L | C |
| Nwobegahay (2011) | BBVCT06ZA | BBVCT06ZA | GU139580 | None | | | | T12S, I15V, L19I, E35D, M36I, R41K, K45R, R57K, L63T, H69K, T74A, L89M, I93L | C |
| | BBVCT36ZA | BBVCT36ZA | GU139596 | None | | | | T12S, I15V, L19I, K20R, M36I, R41K, R57K, L63T, H69K, I93L | C |
| | BBVCT63ZA | BBVCT63ZA | GU139611 | None | | | | T12S, I15V, L19V, M36I, R41K, L63T, H69K, T74A, L89M, I93L | C |
| | BBVCT17ZA | BBVCT17ZA | GU139624 | None | | | | M36I, N37A, L63T, H69K, L89M, I93L | C |
| Nwobegahay (2011) | 08MB23ZA | 08MB23ZA | GU188747 | None | | | | M36I, R41K, G52E, D60E, Q61E, L63T, H69K, L89M, I93L | C |
| | 08MB29ZA | 08MB29ZA | GU188819 | None | | | | T12S, I15V, L19V, M36V, R41K, L63T, H69K, V82I, I93L | C |
| | 08MB41ZA | 08MB41ZA | GU188824 | None | | | | L10I, I15V, L19T, M36I, R41K, L63T, H69K, I93L | C |
| | 08MB48ZA | 08MB48ZA | GU188830 | None | | | | T12S, I15V, L19I, M36I, R41K, L63T, H69K, T74S, L89M, I93L | C |
| | 08MB49ZA | 08MB49ZA | GU188831 | None | | | | L10I, T12S, I15V, L19V, E35D, M36I, R41K, L63T, E65D, H69K, L89M, I93L | C |
| | 08MB57ZA | 08MB57ZA | GU188837 | None | | | | T12S, I15V, L19I, M36I, R41K, L63T, H69K, L89M, I93L | C |
| Parboosing (2011) | Pat055 | HRR22 | HQ844571 | None | | | | T12S, I15V, L19I, E35D, M36I, N37A, R41K, L63T, H69K, T74S, L89M, I93L | C |
| | Pat045 | HRS37 | HQ844581 | None | | | | T12S, L19V, K20R, E35ED, M36I, R41K, L63T, H69K, L89M, I93L | C |
| | Pat037 | HRS84 | HQ844589 | None | | | | T12S, I15V, L19I, M36I, N37D, L63T, H69K, I93L | C |
| | Pat031 | HRS94 | HQ844595 | None | | | | T12P, I15V, L19I, E35D, M36I, P39S, R41K, K45R, D60E, L63T, H69K, L89M, I93L | C |
| | Pat026 | HRS134 | HQ844600 | None | | | | T12S, I15V, L19I, K20R, E35D, M36I, R41K, R57K, L63T, H69K, I72V, T74S, L89M, I93L | C |
| | Pat017 | HRS175 | HQ844609 | None | | | Q58E | T12S, I15V, L19V, K20R, E35D, M36I, R41K, L63T, H69K, T74S, L89M, I93L | C |
| | Pat012 | HRS203 | HQ844614 | None | | | | T12S, I15V, L19I, M36I, N37S, R41K, L63T, H69K, L89M, I93L | C |
| | Pat009 | HRS43 | HQ916283 | None | | | | I15V, L19T, E35D, M36I, R41K, D60E, L63T, H69K, V77VI, V82VI, L89M, I93L | C |
| | Pat003 | HRS156 | HQ916289 | None | | | | T12S, I15V, L19I, E35D, M36I, R41K, L63T, H69K, T74S, L89M, I93L | C |
| Sanabani (2011) | BR2040 | BR2040 | JN692442 | None | | | | L10I, I15V, L19I, M36T, N37K, R41N, L63T, C67G, H69K, L89I, I93L | C |
| Santos (2011) | J86 | J86_PR_RT | JN010462 | None | | | | T12S, K20R, M36I, R41N, L63T, H69K, L89M, I93L | C |
| | J96 | J96_PR_RT | JN010467 | None | | | | I13V, K20R, M36I, N37K, R41N, L63T, H69K, T74S, L89M, I93L | C |
| | J127 | J127_PR | JN010502 | None | | | | I15V, G16E, K20R, M36I, N37K, R41N, L63T, I64V, H69K, I93L | C |
| | J162 | J162_PR_RT | JN010553 | None | | | | L10V, I15V, G16E, K20R, M36I, N37K, P39S, R41N, L63T, H69K, I93L | C |
| | J210 | J210_PR | JN010620 | None | | | | I13V, K20R, M36I, N37K, R41N, L63T, H69K, L89M, I93L | C |
| | J347 | J347_PR | JN010729 | None | | | | K14KR, I15V, G16E, M36I, N37K, R41N, L63T, H69K, I93L | C |
| Thorat (2011) | Pat012 | IN-NARI-HIVDR-5-012 | HQ166850 | None | | | | T12S, I15V, G16E, L19I, M36I, R41K, L63T, H69K, K70KR, I93L | C |
| | Pat024 | IN-NARI-HIVDR-5-024 | HQ166862 | None | | | | T12S, K14R, I15V, L19M, M36I, R41K, L63T, H69K, I93L | C |
| | Pat037 | IN-NARI-HIVDR-5-037 | HQ166875 | None | | | | T12S, I15V, L19T, M36I, R41K, L63T, H69K, P79D, I93L | C |
| | Pat046 | IN-NARI-HIVDR-5-046 | HQ166882 | None | | | | K14R, L19I, M36I, R41K, L63T, H69K, T74S, L89M, I93L | C |
| van Zyl (2011) | A166 | A166 | JN638096 | None | | | | T12S, I15V, L19I, M36I, R41K, D60E, L63T, I64L, H69K, L89M, I93L | C |
| | A178 | A178 | JN638105 | None | | | | T12S, I15V, L19T, K20R, M36I, R41K, K45R, L63T, C67A, H69K, V77I, V82I, L89M, I93L | C |
| | A246 | A246 | JN638143 | None | | | V11I | I15V, L19T, K20R, M36I, R41K, L63T, H69K, L89I, I93L | C |
| | A256 | A256 | JN638152 | None | | | | T12S, I15V, L19I, K20R, M36I, R41K, R57K, I62V, L63T, E65D, H69K, T74A, L89M, I93L | C |
| | A267 | A267 | JN638159 | None | | | | I15V, L19I, M36I, R41K, L63T, H69K, T74S, L89M, I93L | C |
| | A284 | A284 | JN638175 | None | | | | I15V, L19I, M36I, R41K, D60E, L63T, H69K, L89M, I93L | C |
| | A287 | A287 | JN638177 | None | | | | G17D, K20R, M36I, L63T, H69K, L89M, I93L | C |
| | A304 | A304 | JN638186 | None | | | | L19T, K20R, E35D, M36I, R41K, L63T, H69K, V82I, I93L | C |
| | A321 | A321 | JN638193 | None | | | | L19T, K20R, M36I, P39PLS, R41K, L63T, H69K, I72IV, L89M, I93L | C |
| | A332 | A332 | JN638197 | None | | | | T12P, I15V, L19V, E35D, M36I, R41K, L63T, H69K, I72V, T74S, L89M, I93L | C |
| Wright (2011) | AS3-0759B2 | AS3-0759B2 | HQ696814 | None | | | | T12S, I15V, L19V, M36I, L63T, H69K, L89M, I93L | C |
| | AS2-1034B1 | AS2-1034B1 | HQ696816 | None | | | | T12E, K14R, I15V, L19I, M36I, R41K, L63T, H69K, I93L | C |
| | C_004 | C_004 | HQ696824 | None | | | | T12S, K14R, I15V, L19I, M36I, R41K, L63T, H69K, K70R, L89M, I93L | C |
| | OZ_078 | OZ_078 | HQ696839 | None | | | | T12S, K14R, G17D, L19V, M36I, N37K, R41K, L63T, H69K, L89M, I93L | C |
| Ye (2011) | BJ061152 | BJ061152 | JF906564 | None | | | | T12S, K14R, I15V, L19I, M36I, R41K, L63T, H69K, L89M, I93L | C |
| | BJ07168 | BJ07168 | JF906581 | None | | | | T12S, K14R, I15V, L19I, M36I, R41K, L63T, H69K, L89M, I93L | C |
| | BJ07839 | BJ07839 | JF906698 | None | | | | T12TS, M36I, N37K, R41N, I62V, L63T, H69K, I72V, T74S, L89M, I93L | C |
| Ye (2011) | CNBJ168 | CNBJ168 | HQ007312 | None | | | | T12S, K14R, I15V, L19I, M36I, R41K, L63T, H69K, L89M, I93L | C |
| | CNBJ586 | CNBJ586 | HQ007343 | None | | | | T12S, I15V, L19I, M36I, R41K, D60E, Q61E, L63T, H69K, L89M, I93L | C |
| Zeng (2011) | K19 | K19 | JF505534 | None | | | | T12S, I15V, L19I, M36I, R41K, D60E, Q61E, L63T, H69K, T91V, I93L | C |
| Chen (2012) | YN09DH0158 | YN09DH0158 | JQ658615 | None | | | | T12S, K14R, I15V, L19I, M36I, R41K, D60E, L63T, I64IM, H69K, L89M, I93L | C |
| | YN10DH0051 | YN10DH0051 | JQ658674 | None | | | | T12S, K14R, I15V, L19M, M36I, R41K, L63T, H69K, L89M, I93L | C |
| | YN10DH0084 | YN10DH0084 | JQ658705 | None | | | | T12S, K14R, I15V, L19IV, M36I, R41K, L63T, H69K, L89M, I93L | C |
| | YN10DH0112 | YN10DH0112 | JQ658732 | None | | | | T12S, K14R, I15V, L19I, M36I, R41K, L63T, H69K, L89M, I93L | C |
| | YN10DH0147 | YN10DH0147 | JQ658766 | None | | | | T12S, I15V, L19T, M36I, R41K, K45R, L63T, I64M, H69K, L89M, I93L | C |
| da Silveira (2012) | BRMS47 | BRMS47 | JF342298 | None | | | | L10V, I13V, I15V, L19I, M36T, N37K, R41N, K43R, L63T, H69K, L89I, I93L | C |
| De Gascun (2012) | IRL18487 | IRL18487 | JN622864 | None | | | | T12S, I15V, L19I, M36I, R41K, L63T, H69K, L89M, I93L | C |
| | IRL39987 | IRL39987 | JN622885 | None | | | Q58E | T12TS, I15IV, L19LI, M36I, R41K, D60E, Q61E, L63T, I64M, H69K, L89M, I93L | C |
| | IRL03405 | IRL03405 | JN622892 | None | | | | T12S, I15V, L19I, M36I, R41K, L63T, C67CF, H69K, T74A, L89M, I93L | C |
| | IRL09507 | IRL09507 | JN622901 | None | | | | T12TS, I15V, G16E, L19T, K20R, M36I, L63T, H69K, V77I, V82I, L89M, I93L | C |
| | IRL40608 | IRL40608 | JN622919 | None | | | Q58QE | T12S, I15V, G16GE, L19IT, K20R, E35D, M36I, R41K, L63T, H69K, I72IT, T74S, L89M, I93L | C |
| | IRL63858 | IRL63858 | JN622978 | None | | | | I13V, I15IV, L19I, M36I, R41K, L63T, I64M, H69K, L89M, I93L | C |
| | IRL34030 | IRL34030 | JN623007 | None | | | | T12AP, I15V, L19T, K20R, E35D, M36I, R41K, D60E, Q61E, L63T, E65D, H69K, L89M, I93L | C |
| | IRL37949 | IRL37949 | JN623009 | None | | | | T12PS, I15V, L19T, K20R, M36I, R41K, L63T, H69K, L89M, I93L | C |
| | IRL39184 | IRL39184 | JN623011 | None | | | | T12P, I15V, L19T, E35D, M36I, R41K, L63T, H69K, V82I, L89M, I93L | C |
| | IRL63686 | IRL63686 | JN623032 | None | | | | I15V, G16E, L19I, M36L, N37T, P39S, R41K, K45KR, L63T, H69K, L89M, I93L | C |
| | IRL72441 | IRL72441 | JN623037 | None | | | | L10I, T12S, I15V, L19I, M36I, R41K, D60E, Q61N, L63T, C67S, H69K, T74A, L89M, I93L | C |
| Hassan (2012) | RS09000879 | RS09000879 | HQ441624 | None | | | | I15V, L19I, E35D, M36I, R41K, L63T, H69K, L89M, I93L | C |
| | RS09000896 | RS09000896 | HQ441641 | None | | | | T12S, I15V, L19V, M36I, N37K, R41N, L63T, H69K, I72T, I93L | C |
| | RS09000926 | RS09000926 | HQ441669 | None | | | V11VI | T12S, I15V, L19V, K20R, M36I, N37KR, R41NS, R57K, Q61QH, L63T, H69K, V82I, L89I, I93L | C |
| Hingankar (2012) | IN-NARI-4-008 | IN-NARI-4-008 | JN314899 | None | | | | T12S, I15V, L19I, M36I, R41K, L63T, H69K, I93L | C |
| | IN-NARI-4-019 | IN-NARI-4-019 | JN314908 | None | | | | K14R, I15V, G16E, L19I, K20KR, M36V, R41K, L63T, H69K, V82I, L89M, I93L | C |
| | IN-NARI-4-020 | IN-NARI-4-020 | JN314909 | None | | | | T12S, I15V, L19I, M36I, R41K, K43KR, L63T, H69K, L89M, I93L | C |
| | IN-NARI-4-022 | IN-NARI-4-022 | JN314911 | None | | | | T12S, I13V, I15V, L19T, K20R, M36I, R41K, D60E, Q61E, L63T, H69K, L89M, I93L | C |
| | IN-NARI-4-026 | IN-NARI-4-026 | JN314915 | None | | | | I13V, Q18H, L19I, M36I, R41RK, D60DE, L63T, I64L, H69K, L89M, I93IL | C |
| | IN-NARI-4-041 | IN-NARI-4-041 | JN314928 | None | | | | T12S, I15V, L19IT, M36I, R41K, L63T, H69K, I93L | C |
| | IN-NARI-4-046 | IN-NARI-4-046 | JN314933 | None | | | | T12S, I15V, G16E, L19I, M36I, R41K, L63T, H69K, I93L | C |
| | IN-NARI-4-048 | IN-NARI-4-048 | JN314934 | None | | | | L10I, T12S, I15V, G16E, L19I, M36I, L63T, H69K, I72IV, I93L | C |
| | IN-NARI-4-058 | IN-NARI-4-058 | JN314941 | None | | | | I15V, L19I, M36I, R41K, L63T, H69K, V82I, L89M, I93L | C |
| | IN-NARI-4-073 | IN-NARI-4-073 | JN314954 | None | | | | T12S, K14R, I15V, G17D, L19I, M36I, R41K, L63T, H69K, I93L | C |
| | IN-NARI-4-076 | IN-NARI-4-076 | JN314957 | None | | | | K14KR, I15V, G16E, L19I, M36I, R41K, K45KR, L63T, H69K, I93L | C |
| | IN-NARI-4-087 | IN-NARI-4-087 | JN314966 | None | | | | T12S, I15V, G16E, L19I, K20R, M36I, N37K, P39S, R41K, I62IV, L63T, H69K, T74TA, L89LM, I93L | C |
| | IN-NARI-4-088 | IN-NARI-4-088 | JN314967 | None | | | | T12S, G16E, L19I, K20R, M36I, P39S, R41K, L63T, H69K, T74TA, L89M, I93L | C |
| | IN-NARI-4-110 | IN-NARI-4-110 | JN314984 | None | | | | I15V, L19T, M36I, R41K, L63T, I64M, H69K, V82VI, L89M, I93L | C |
| Iweriebor (2012) | 07B17ZA | 07B17ZA | GU201804 | None | | | | I15V, L19T, E35D, M36I, L63T, H69K, V82I, I93L | C |
| Karlsson (2012) | SE_116 | SE_116 | JQ698747 | None | | | | L19I, M36I, R41K, L63T, H69K, L89M, I93L | C |
| | SE_160 | SE_160 | JQ698778 | None | | | | I15V, L19T, M36I, R41K, L63T, H69K, V82VI, I93L | C |
| Luebbert (2012) | LEU 0100 | 70101825 | | None | | | | T12S, I15V, L19I, M36I, R41K, L63T, H69K, T74S, L89M, I93L | C |
| | LEU 0112 | 70102369 | | None | | | | I15V, L19I, M36I, R41K, Q61E, L63T, I64M, H69K | C |
| | LEU 0114 | 70102373 | | None | | | | T12S, K14KN, I15V, L19T, E35D, M36I, N37D, L63T, H69K, T74A | C |
| | LEU 0107 | 70102359 | | None | | | | I15IV, G16E, L19T, K20R, M36L, N37S, L63T, H69K, T74S, V77I | C |
| | LEU 0117 | 70103561 | | None | | | | T12A, I15V, G16E, L19I, K20R, M36I, R41K, L63T, H69K | C |
| Musyoki (2012) | DGM.16 | DGM.16 | JN176295 | None | | | | L10I, T12S, I15V, G16E, L19I, M36I, R41K, D60E, L63T, H69K, L89M, I93L | C |
| Nazziwa (2012) | 1005301 | 1005301 | JX498986 | None | | | | I15V, M36I, R41K, K45R, L63T, I66L, H69K, L89M, I93L | C |
| Nwobegahay (2012) | BBCR05ZA | BBCR05ZA | GU177468 | None | | | | T12S, I15V, L19I, M36I, R41K, L63T, H69K, I93L | C |
| | BBCR55ZA | BBCR55ZA | GU177537 | None | | | | T12P, I15V, L19I, K20R, M36I, N37Q, I62V, L63T, H69K, L89M, I93L | C |
| | BBCR59ZA | BBCR59ZA | GU177499 | None | | | | T12S, I15V, L19I, K20R, M36I, R41K, R57K, L63T, H69K, I93L | C |
| | MC14ZA | MC14ZA | GU177540 | None | | | | M36I, R41K, L63T, H69K, L89M, I93L | C |
| | MC44ZA | MC44ZA | GU177527 | None | | | | L5F, I15V, L19I, M36I, R41K, L63T, H69K, I93L | C |
| | MC45ZA | MC45ZA | GU177528 | None | | | | W6S, Q7K, T12S, I15V, L19I, M36I, R41K, L63T, H69K, K70R, I72V, T74S, L89M, I93L | C |
| Sigaloff (2012) | KELKN257 | KELKN257 | JN628518 | None | | | | I15V, G16E, K20R, M36I, N37S, R41K, L63T, H69K, V75I, V82I, L89M, I93L | C |
| Sinha (2012) | AIIMS-42 | AIIMS-42 | HQ453373 | None | | | | T12S, K14KR, I15V, L19I, M36I, R41K, L63T, H69K, L89M, I93L | C |
| | AIIMS-50 | AIIMS-50 | HQ453379 | None | | | | K14R, G17D, L19I, M36I, L63T, E65D, H69K, I72V, L89M, I93L | C |
| | AIIMS-64 | AIIMS-64 | HQ453384 | None | | | I84L | T12S, K14KR, L19I, E21K, M36I, N37NS, R41K, L63T, E65D, H69K, I72IT, L89M | C |
| | AIIMS-110 | AIIMS-110 | HQ453394 | None | | | | T12S, I15V, G16E, L19I, M36I, L63T, H69K, L89M, I93L | C |
| Telan (2012) | 11095994 | 11095994 | AB747492 | None | | | | T12P, L19I, M36I, R41K, R57K, D60E, L63T, I64L, H69K, L89M, I93L | C |
| | 11118602 | 11118602 | AB747502 | None | | | | T12P, K14R, I15V, L19I, M36I, N37S, R41K, L63T, H69K, L89M, I93L | C |
| | 12031744 | 12031744 | AB747504 | None | | | | L10V, I15V, M36L, R41K, L63T, H69K, T74A, L89M, I93L | C |
| Alencar (2013) | SP2-0041 | SP2-0041 | JQ238082 | None | | | | I15V, M36T, N37K, R41N, K45KR, L63T, H69K, I72IV, T74S, L89I, I93L | C |
| | MG2-0032 | MG2-0032 | JQ238221 | None | | | | K20R, M36I, N37K, R41I, R57K, D60E, Q61N, L63T, H69K, L89M, I93L | C |
| Ferreira (2013) | BR09SP143 | BR09SP143 | HM534017 | None | | | | T12P, I13IV, K14R, I15V, G16E, M36I, N37K, R41N, L63T, H69K, L89M, I93L | C |
| Frentz (2013) | EHR-04761 | EHR-04761 | JX299624 | None | | | | I15V, G17D, K20R, M36I, R41K, L63T, E65D, H69K, I72IV, I93L | C |
| | EHR-10493 | EHR-10493 | JX299706 | None | | | | T12S, I15V, L19I, M36I, N37S, R41K, L63T, H69K, T74A, L89M, I93L | C |
| | EHR-23526 | EHR-23526 | JX299945 | None | | | | T12S, I15V, L19T, K20R, M36I, R41K, L63T, H69K, L89M, I93L | C |
| | EHR-34336 | EHR-34336 | JX300121 | None | | | | L19I, M36I, R41K, L63T, H69K, I93L | C |
| | EHR-41014 | EHR-41014 | JX300233 | None | | | | I15V, L19I, M36L, N37S, R41K, L63T, H69K, I93L | C |
| | EHR-42438 | EHR-42438 | JX300254 | None | | | | T12S, I15V, L19I, M36I, R41K, Q61N, L63T, H69K, L89M, I93L | C |
| | EHR-45550 | EHR-45550 | JX300298 | None | | | | K14N, I15V, M36I, R41K, L63T, H69K, L89LM, I93L | C |
| | EHR-50306 | EHR-50306 | JX300376 | None | | | | K14R, M36I, N37D, L63T, H69K, L89M, I93L | C |
| | EHR-53508 | EHR-53508 | JX300427 | None | | | | I15V, L19I, L33LS, M36I, R41K, D60E, L63T, H69K, L89M, I93L | C |
| | EHR-55111 | EHR-55111 | JX300458 | None | | | | T12S, I13V, K14R, I15V, G16GE, L19T, M36I, R41K, L63T, I64M, H69K, L89M, I93L, N98ND | C |
| | EHR-67880 | EHR-67880 | JX300684 | None | | | | T12S, I15V, L19I, M36I, N37S, R41K, L63T, H69K, V82I, I93L | C |
| | EHR-79197 | EHR-79197 | JX300897 | None | | | | T12S, I13V, I15V, K20R, M36I, R41K, L63T, H69K, L89M, I93L | C |
| | EHR-95784 | EHR-95784 | JX301120 | None | | | | T12S, I15V, L19V, M36I, N37S, R41K, L63T, H69K, L89M, I93L | C |
| Hawke (2013) | 18028751 | 18028751 | KC237987 | None | | | | T12S, I15V, L19I, M36I, N37K, R41N, L63T, H69K, T74S, L89M, I93L | C |
| Temereanca (2013) | SR21 | SR21 | JX966498 | None | | | | T12S, I15V, L19T, M36I, N37S, R41K, L63T, H69K, I93L | C |
| | SR9 | SR9 | JX966535 | None | | | | T12S, I13V, I15V, L19V, M36I, N37S, R41K, L63T, I64M, H69K, L89M, I93L, L97I | C |