Protease Inhibitors

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Protease Inhibitors

Subtype	C
Gene	PR
Mutation	M36V
Rx	PI-naive
IncludeMixtures	No

References	51
Patients	288
Isolates	310

Sequences matching input query are shown below. Original reference, patient identifier, isolate name, partial treatment histories and accession number are indicated. Complete treatment histories, when available, can be accessed by clicking the isolate name. Sequences may additionally be downloaded in the fasta format, or viewed as individual or composite alignments using the options above. If the user wishes to view individual alignments of isolates for which there are multiple clones, the user can choose to view either an alignment of consensus sequences derived from the clones or an alignment of each clone as well as a consensus sequence.

Author (yr)	Patient	Isolate	Acc#	PIs	PIMinorDRMs	OtherMut	Subtype
Lole (1999)	IND301999	ind301999	AF067154	None		T12S, I15V, L19I, K20R, M36V, R41K, L63P, H69K, I93L	C
	IND21068	ind21068	AF067155	None		T12S, K14R, I15V, L19I, M36V, N37S, R41K, K43R, D60E, Q61E, L63P, H69K, L89M, I93L	C
	IND30190x	ind301904	AF067157	None		T12S, K14R, I15V, L19I, A22T, M36V, R41K, L63P, H69K, L89M, I93L	C
	IND11246	ind11246	AF067159	None		T12S, K14R, I15V, L19T, K20R, M36V, R41K, L63P, H69K, L89M, I93L	C
Handema (2002)	H00ZM4721	H00ZM4721	AB081151	None		T12S, I13V, I15V, L19I, M36V, N37S, R41K, H69K, L89M	C
Novitsky (2002)	96BWMO1	96BWMO1	AF443074	None		T12S, I15V, L19I, M36V, R41K, L63P, H69K, K70R, L89M, I93L	C
Yang (2002)	DH008	DH008	AB078707	None		T12S, K14R, I15V, L19I, M36V, R41K, K43R, L63P, H69K, K70R, I93L	C
	HH069	HH069	AB078688	None		T12S, I15V, L19I, M36V, R41K, D60E, L63P, I93L	C
Gordon (2003)	ZA080p01	ZA080p01	AY137005	None		T12S, I15V, L19V, E35D, M36V, N37D, R41K, H69K, L89M, I93L	C
Yang (2003)	HH003	HH003	AB090997	None		L10V, T12P, I15V, L19I, M36V, R41K, D60E, L63P, I93L	C
	HH004.	HH004.	AB090998	None		T12S, I15V, L19I, M36V, R41K, D60E, L63S, H69K, L89M, I93L	C
	HH029	HH029	AB090999	None		T12S, I15V, L19I, M36V, R41K, D60E, L63S, H69K, I93L	C
	HH069	HH069	AP005206	None		T12S, I15V, L19I, M36V, R41K, D60E, L63P, I93L	C
Deshpande (2004)	in14	in14	AY515740	None		T12S, K14R, I15V, G17D, L19I, M36V, N37K, R41K, L63P, H69K, V82I, L89M, I93L	C
	in123	in123	AY515832	None		T12TA, I15IV, L19T, M36V, R41K, L63P, H69K, L89M, I93L	C
	in103	in103	AY515813	None		T12S, L19X, M36V, R41K, L63P, H69K, L89M, I93L	C
	in62	in62	AY515776	None		T12S, L19I, M36V, R41K, D60E, L63PT, H69K, V82VI, L89M, I93L	C
	in95	in95	AY515806	None		T12S, K14R, I15V, G16A, L19I, M36V, R41K, L63P, H69K, L89M, I93L	C
	in99	in99	AY515809	None		T4S, T12S, K14R, I15V, L19I, M36V, R41K, Q61H, L63P, H69K, L89M, I93L	C
	in53	in53	AY515768	None		T12S, K14R, I15V, L19I, M36V, R41K, L63P, H69K, L89M, I93L	C
	in74	in74	AY515787	None		T12P, K14R, I15V, L19I, M36V, R41K, L63P, H69K, K70R, V82I, L89M, I93L	C
	in134	in134	AY515841	None		T12S, I15V, L19T, M36V, R41K, L63T, H69K, A71T, I93L	C
	in28	in28	AY515750	None		T12S, I15V, L19T, M36V, R41K, D60E, L63P, H69K, V82I, L89M, I93L	C
	in4	in4	AY515731	None		T12S, I15V, L19K, M36V, R41K, L63P, H69K, L89M, I93L	C
	in122	in122	AY515831	None		L19T, M36V, R41K, L63P, H69K, L89M, I93L	C
	in63	in63	AY515777	None		T12S, L19I, M36V, R41K, D60E, L63P, H69K, V82I, L89M, I93L	C
	in66	in66	AY515780	None		T12S, I15V, L19I, M36V, R41K, L63P, H69K, L89LM, I93L	C
	in64	in64	AY515778	None		Q7R, T12S, K14R, I15V, L19I, M36V, R41K, L63P, H69K, L89M, I93L	C
	in89	in89	AY515801	None		T12S, I15V, L19ST, M36V, R41K, L63P, I64M, H69K, L89M, I93L	C
	in75	in75	AY515788	None		T12P, K14R, I15V, L19I, M36V, R41K, L63P, H69K, K70R, V82I, L89M, I93L	C
	in104	in104	AY515814	None		T12P, I15V, L19I, M36V, N37S, R41K, L63P, H69K, A71T, L89M, I93L	C
	in65	in65	AY515779	None		T12S, I15IV, L19IT, M36V, N37S, R41K, L63P, H69K, V82VI, I93L	C
	in31	in31	AY515752	None		L10I, T12S, K14R, I15V, L19T, M36V, P39Q, R41K, L63P, H69K, L89M, I93L	C
	in2	in2	AY515729	None		T12S, L19I, M36V, R41K, L63P, H69K, L89M, I93L	C
	in17	in17	AY515743	None		T12S, I15V, L19IT, K20R, M36V, R41K, L63P, I64M, H69K, L89M, I93LV	C
	in7	in7	AY515733	None		T4S, T12S, K14R, I15V, L19I, M36V, R41K, Q61H, L63P, H69K, L89M, I93L	C
	in40	in40	AY515759	None		T12A, I15V, L19I, M36V, L63P, H69K, V75VI, V82I, L89M, I93L	C
Holguin (2004)	IN81071334	IN81071334	AY551449	None		T12S, K14R, I15V, L19T, M36V, R41K, L63P, H69K, L89M, I93L	C
	IN0014	IN0014	AY551461	None		T12S, K14R, L19I, M36V, R41K, L63P, H69K, K70R, R87RG, L89M, I93L	C
	IN81071353	IN81071353	AY551450	None		T12S, I15V, L19I, M36V, R41K, L63P, H69K, L89M, I93L	C
	IN0015	IN0015	AY551462	None		T12S, K14R, I15V, L19I, M36V, R41K, L63P, H69K, K70R, L89M, I93L	C
	IN81071458	IN81071458	AY551453	None		T12S, K14KR, I15V, G16GE, L19I, M36V, R41K, L63T, H69K, L89M, I93L	C
	IN0075	IN0075	AY551463	None		T12S, K14R, I15V, L19T, M36V, R41K, L63P, H69K, K70KR, L89M, I93L	C
Balakrishnan (2005)	YRG44	YRG44	AY787530	None		T12S, K14R, I15V, L19I, M36V, R41K, L63P, H69K, L89M, I93L	C
	YRG37	YRG37	AY787523	None		T12S, K14R, I15V, L19I, M36V, R41K, L63P, H69K, L89M, I93L	C
	YRG3	YRG3	AY787489	None		T12S, I15V, L19I, M36V, R41K, H69K, L89M, I93L	C
Eshleman (2005)	16275	16275_BL	AY746371	None		T12S, I15V, L19I, M36V, R41K, L63P, H69K, L89M, I93L	C
		16275_1Y	AY746372	None		T12S, I15V, L19I, M36V, R41K, L63P, H69K, L89M, I93L	C
		16275_2Y	AY746373	None		T12A, I15V, L19I, M36V, R41K, L63P, H69K, L89M, I93L	C
	00836	00836_2Y	AY746361	None		T12S, I15V, L19I, M36V, R41K, L63P, H69K, L89M, I93L	C
	12466	12466_BL	AY746365	None		I15V, L19I, M36V, R41K, L63P, H69K, L89M, I93L	C
		12466_1Y	AY746366	None		I15V, L19IT, M36V, R41K, L63P, H69K, L89M, I93L	C
		12466_2Y	AY746367	None		I15V, L19T, M36V, R41K, L63P, H69K, L89M, I93L	C
Laeyendecker (2005)	Pingxiang-321	P321	AY635719	None		T12S, I15V, L19I, M36V, R41K, D60E, L63P, H69K, L89M, I93L	C
	Pingxiang-326	P326	AY635720	None		T12S, I15V, L19I, M36V, R41K, D60E, L63P, H69K, L89M, I93L	C
	Binyang-409	B409	AY635721	None		T12S, I15V, L19I, M36V, R41K, D60E, L63P, H69K, L89M, I93L	C
	Binyang-411	B411	AY635722	None		T12A, I15V, L19I, M36V, R41K, D60E, L63P, H69K, L89M, I93L	C
	Binyang-417	B417	AY635723	None		T12S, I15V, L19I, M36V, R41K, D60E, L63P, H69K, L89M, I93L	C
	Binyang-418	B418	AY635724	None		T12S, I15V, L19I, M36V, R41K, D60E, L63P, H69K, L89M, I93L	C
	Binyang-426	B426	AY635725	None		T12S, I15V, L19I, M36V, R41K, D60E, L63P, H69K, L89M, I93L	C
	Binyang-431	B431	AY635726	None		T12S, I15V, L19I, M36V, R41K, D60E, L63P, H69K, L89M, I93L	C
	Binyang-448	B448	AY635727	None		T12S, I15V, L19I, M36V, R41K, D60E, L63P, H69K, L89M, I93L	C
	Binyang-449	B449	AY635728	None		T12S, I15V, L19I, M36V, R41K, D60E, L63P, H69K, L89M, I93L	C
	Binyang-452	B452	AY635729	None		T12S, I15V, L19I, M36V, R41K, D60E, L63P, H69K, L89M, I93L	C
	Binyang-464	B464	AY635730	None		T12S, I15V, L19I, M36V, R41K, D60E, L63P, H69K, L89M, I93L	C
	Binyang-466	B466	AY635731	None		T12S, I15V, L19I, M36V, R41K, D60E, L63P, H69K, L89M, I93L	C
	Binyang-468	B468	AY635732	None		T12S, I15V, L19I, M36V, R41K, D60E, L63P, H69K, L89M, I93L	C
	Binyang-469	B469	AY635733	None		T12S, I15V, L19I, M36V, R41K, D60E, L63P, H69K, L89M, I93L	C
	Binyang-472	B472	AY635734	None		T12S, I15V, L19I, M36V, R41K, D60E, L63P, H69K, L89M, I93L	C
	Binyang-476	B476	AY635735	None		T12S, I15V, L19I, M36V, R41K, D60E, L63P, H69K, L89M, I93L	C
	Binyang-483	B483	AY635736	None		T12S, I15V, L19I, M36V, R41K, D60E, L63P, H69K, L89M, I93L	C
	Binyang-497	B497	AY635737	None		T12S, I15V, L19I, M36V, R41K, D60E, L63P, H69K, L89M, I93L	C
	Binyang-503	B503	AY635738	None		T12S, I15V, L19I, M36V, R41K, D60E, L63P, H69K, L89M, I93L	C
	Binyang-518	B518	AY635739	None		T12S, I15V, L19I, M36V, R41K, D60E, L63P, H69K, L89M, I93L	C
	Binyang-522	B522	AY635740	None		T12S, I15V, L19I, M36V, R41K, D60E, L63P, H69K, V75I, L89M, I93L	C
	Binyang-526	B526	AY635741	None	L89LV	T12S, I15V, L19I, M36V, R41K, D60E, L63P, H69K, I93L	C
	Binyang-531	B531	AY635744	None		T12S, I15V, L19I, M36V, R41K, D60E, L63P, H69K, L89M, I93L	C
	Binyang-538	B538	AY635745	None		T12S, I15V, L19I, M36V, R41K, D60E, L63P, H69K, L89M, I93L	C
	Binyang-551	B551	AY635746	None		T12S, I15V, L19I, M36V, R41K, D60E, L63P, H69K, L89M, I93L	C
	Binyang-580	B580	AY635747	None		T12S, I15V, L19I, M36V, R41K, D60E, L63P, H69K, L89M, I93L	C
	Binyang-583	B583	AY635748	None		T12S, I15V, L19I, M36V, R41K, D60E, L63P, H69K, L89M, I93L	C
	Binyang-588	B588	AY635749	None		T12S, I15V, L19I, M36V, R41K, D60E, L63P, H69K, L89M, I93L	C
	Binyang-592	B592	AY635750	None		T12S, I15V, L19I, M36V, R41K, D60E, L63P, H69K, L89M, I93L	C
	Binyang-597	B597	AY635751	None		T12S, I15V, L19I, M36V, R41K, D60E, L63P, H69K, L89M, I93L	C
	Binyang-603	B603	AY635752	None		T12S, I15V, L19I, M36V, R41K, D60E, L63P, H69K, L89M, I93L	C
	Binyang-610	B610	AY635754	None		I15V, L19I, M36V, R41K, D60E, L63P, H69K, L89M, I93L	C
	Binyang-615	B615	AY635755	None		T12S, I15V, L19I, M36V, R41K, D60E, L63P, H69K, L89M, I93L	C
	Binyang-620	B620	AY635756	None		T12S, I15V, L19I, M36V, R41K, D60E, L63P, H69K, L89M, I93L	C
	Binyang-686	B686	AY635757	None		T12S, I15V, L19I, M36V, R41K, D60E, L63P, H69K, L89M, I93L	C
	Binyang-698	B698	AY635758	None		T12S, I15V, L19I, M36V, R41K, D60E, L63P, H69K, L89M, I93L	C
	Binyang-700	B700	AY635759	None		T12S, I15V, L19I, M36V, R41K, D60E, L63P, H69K, L89M, I93L	C
	Binyang-714	B714	AY635760	None		T12S, I15V, L19I, M36V, R41K, D60E, L63P, H69K, L89M, Q92P, I93L	C
	Binyang-719	B719	AY635761	None		T4A, T12S, I15V, L19I, M36V, R41K, D60E, L63P, H69K, L89M, I93L	C
Qiu (2005)	YNRL9607	YNRL9607	AY967804	None		T12S, K14R, I15V, L19I, M36V, R41K, L63P, H69K, L89M, I93L	C
Lindstrom (2006)	SIIDC0208	SIIDC0208		None		L19I, M36V, R41K, L63S, I64L, H69K, K70KR, L89M, I93L	C
Rousseau (2006)	Pt1	02PS001MB1	DQ275648	None		I15V, L19I, M36V, N37S, P39Q, L63S, H69K, V82I, I93L	C
Han (2007)	LN05	00CNLN05	EF122507	None		T12S, I15V, L19I, E35D, M36V, R41K, D60E, L63P, H69K, L89M, I93L	C
	LN07	00CNLN07	EF122508	None		T12S, I15V, L19I, M36V, R41K, D60E, L63P, H69K, L89M, T91I, I93L	C
	LN74	04CNLN74	EF122540	None		T12S, I15V, L19I, M36V, R41K, D60E, L63P, H69K, L89M, I93L	C
	LN60	04CNLN60	EF122574	None		T12S, I15V, L19I, M36V, R41K, D60E, L63P, H69K, K70R, L89M, I93L	C
Sen (2007)	N053	RT53-PL	EF186936	None		T12S, I15V, G16E, L19I, M36V, R41K, K45R, L63T, H69K, I93L	C
	N012	RT12-PL	EF186937	None		I15V, L19T, M36V, R41K, L63P, H69K, I93L	C
	N003	RT3-PL	EF186949	None		T12A, I15V, L19I, M36V, R41K, L63P, H69K, L89M, Q92QH, I93L	C
	N013	RT13-PL	EF186950	None		T12S, I15V, L19I, E35EG, M36V, R41RK, L63P, H69K, L89M, I93L	C
	N048	RT48-PL	EF186951	None		T12S, I15V, L19M, M36V, R41K, D60E, L63P, H69K, I93L	C
	N063	RT63-PL	EF186952	None		T12S, K14R, I15V, L19I, M36V, R41K, L63P, H69K, K70R, L89M, I93L	C
	PtID-RT12	PtID-RT12	DQ826601	None		I15V, L19T, M36V, R41K, L63P, H69K, I93L	C
	PtID-NPT90	PtID-NPT90	DQ826662	None		T12S, K14R, L19IT, M36V, R41K, L63P, H69K, I93L	C
Soundararajan (2007)	TRC25	TRC25	EF491939	None		I15V, L19T, M36V, R41K, L63P, I64V, H69K, L89LM, I93L	C
Vidal (2007)	U1620	02BU.U1620	AM260223	None		T12S, I15V, L19T, M36V, N37K, R41N, Q61E, L63P, H69K, V82I, L89M, I93L	C
Zhong (2007)	D0015	05CN_015	EF199562	None		T12S, I15V, G16A, L19I, M36V, R41K, D60E, L63S, H69K, K70R, L89M, I93L	C
	D0016	05CN_016	EF199563	None		T12S, I15V, L19I, M36V, R41K, D60E, L63P, H69K, K70R, L89M, I93L	C
	D0068	05CN_068	EF199597	None		T12S, I15V, L19T, M36V, R41K, D60E, L63S, H69K, L89M, I93L	C
	D0069	05CN_069	EF199598	None		T12S, I15V, L19M, M36V, R41K, D60E, L63S, H69K, L89M, I93L	C
	D0087	05CN_087	EF199615	None		I15V, L19I, M36V, R41K, D60E, L63P, H69K, L89M, I93L	C
Arora (2008)	26	PI-26		None		M36V, R41K, R57K, L63P, H69Q, V75A, V82I, Q92P, I93L	C
	28	PI-28		None		M36V, R41K, K45R, D60E, L63P, H69K, L89M, I93L	C
	29	PI-29		None		T12S, I15V, L19T, K20I, E34G, M36V, R41K, D60E, L63P, H69K	C
	49	PI-49		None		T12S, I15V, L19I, M36V, R41K, L63P, H69K, I93L	C
	8	PI-8		None		M36V, R41K, L63T, H69K, I93L	C
	7	PI-7		None		T12S, I15V, L19I, M36V, R41K, L63P, H69Q, L89M, I93L	C
	11	PI-11		None		T12S, K14R, I15V, G16E, L19I, M36V, N37K, R41K, Q61D, L63T, C67Y, H69K, L89M, I93L	C
Chang (2008)	TW9240	TW9240	DQ640290	None		L10P, T12S, K14R, I15V, L19I, M36V, R41K, L63P, H69K, I93L	C
	TW4596a	TW4596a		None		T12S, L19I, M36V, R41K, L63P, H69K, L89M, I93L	C
Ferreira (2008)	822	BR06PR822	EU340751	None		K14R, I15V, M36V, N37K, R41N, L63P, H69K, L89M, I93L	C
Jacobs (2008)	1609	1609	EF602260	None		T12S, I15V, L19I, E35E_IT, M36V, P39PS, R41K, L63LV, H69K, T74S, L89M, I93L	C
	1695	1695	EF602289	None		I13V, K14R, I15V, L19I, E35E_T, M36V, P39S, R41K, H69K, L89M, I93L	C
Lahuerta (2008)	P348426	P348426_04	EF407711	None		T12S, I15V, L19I, M36V, R41K, L63P, H69K, A71T, I93L	C
Lall (2008)	G19	G19-AFMC10	EU158873	None		T12S, K14R, I15V, L19T, M36V, R41K, L63P, H69K	C
	G24	G24-AFMC12	EU158875	None		K14R, I15V, L19I, M36V, R41K, L63P, H69K, P79D, L89M, I93L	C
	G26	G26-AFMC13	EU158876	None		T12S, K14KR, I15V, L19I, M36V, P39T, R41K, L63P, H69K, I93L	C
	G32	G32-AFMC17	EU158880	None		T12S, L19I, M36V, R41K, D60E, L63P, H69K, V82I, L89M, I93L	C
	G35	G35-AFMC19	EU158882	None		T12S, I15V, G16A, L19I, M36V, R41K, L63P, H69K, I93L	C
	G44	G44-AFMC26	EU158889	None		T12S, I15V, G16GE, L19IT, M36V, R41K, L63PS, H69K, I93L	C
	G18	G18-AFMC38	EU484322	None		T12S, I15V, L19I, M36V, R41K, L63P, H69K, L89LM, I93L	C
Marconi (2008)	SW065	SW065	EU308076	None		T12S, I15V, L19I, M36V, R41K, D60E, L63P, H69K, L89M, I93L	C
Matthews (2008)	PS001	PS001	FJ199584	None		I15V, L19I, M36V, N37S, P39Q, L63S, H69K, V82I, I93L	C
	PS405	PS405	FJ199812	None		T12S, I15V, L19V, E35D, M36V, R41K, Q61N, H69Q, L89M, I93L	C
Brown (2009)	CAS_1257_16_196001	CAS_1257_16_196001	FJ030660	None		I15V, G16E, M36V, N37S, L63A, H69K, L89M, I93L	C
Fujisaki (2009)	19	19	AB442231	None		T12TS, K14R, I15V, L19I, M36V, R41K, L63P, H69K, L89M, I93L	C
Iqbal (2009)	100031	100031	EU449522	None		T12S, K14R, I15V, L19I, M36V, R41K, L63P, H69K, L89M, I93L	C
	100032	100032	EU449528	None		T12S, K14R, I15V, L19I, M36V, R41K, L63S, H69K, I72IV, L89M, I93L	C
	100037	100037	EU449526	None		T12P, K14R, I15V, L19I, M36V, R41K, L63P, H69K, L89M, I93L	C
	100040	100040	EU449529	None		T12S, K14R, I15V, L19I, M36V, R41K, L63P, H69K, L89M, I93L	C
	100075	100075	EU449541	None		T12S, K14R, I15V, L19I, M36V, R41K, L63T, H69K, L89M, I93L	C
	100098	100098	EU449537	None		T12S, K14R, I15V, L19I, M36V, R41K, L63P, H69K, L89M	C
	100185	100185	EU449546	None		T12S, K14R, I15V, L19I, M36V, R41K, L63P, H69K, L89M, I93L	C
	100294	100294	EU449554	None		T12S, I13V, L19I, M36V, R41K, L63PS, H69K, L89M	C
	100309	100309	EU449553	None		L5LI, T12S, I15V, L19I, M36V, R41K, L63P, H69K, I93L	C
	100321	100321	EU449548	None		T12S, K14R, L19I, M36V, R41K, L63P, H69K, L89M, I93L	C
	100084	100084	EU449540	None		T12S, I15V, L19T, M36V, R41K, L63P, H69K, L89M, I93L	C
	100048	100048	EU449535	None		T12S, K14R, I15IV, L19IM, M36V, R41K, L63P, H69K, L89M, I93L	C
	100838	100838	EU449547	None		T12P, K14R, I15V, L19I, M36V, R41K, L63P, H69K, L89M, I93L	C
Kandathil (2009)	cd06_648	cd06_648	EU030415	None		T12S, I15V, L19I, M36V, R41K, L63P, H69K	C
	vl05_153	vl05_153	EU030418	None		T12S, K14R, I15V, L19I, M36V, R41K, L63P, H69K, L89M, I93L	C
	CD06_568	CD06_568	EU106119	None		I15V, L19X, M36V, R41K, L63P, H69K, V82I, I93L	C
	CD06_658	CD06_658	EU106120	None		I15V, L19T, M36V, R41K, L63P, H69K, V82I, L89M, I93L	C
	VL05_151	VL05_151	EU110063	None		T12S, I15V, L19I, M36V, P39T, R41K, D60E, L63P, H69K, L89M, I93L	C
	VL05_220	VL05_220	EU110068	None		L19I, M36V, N37S, R41K, L63P, H69K, V82I, L89M, I93L	C
	VL06_090	VL06_090	EU110073	None		T12S, I15V, L19T, M36V, R41K, L63P, H69K, L89M, I93L	C
	VL06_096	VL06_096	EU110074	None		T12S, K14R, I15V, G16E, L19I, M36V, R41K, H69K, L89M, I93L	C
	CD06_402	CD06_402	EU683765	None		I15V, G16A, L19I, E35G, M36V, N37D, L63Q, H69K, K70R, T74S, L89M, I93L	C
	CD06_406	CD06_406	EU683766	None		T12S, I15V, L19I, M36V, R41K, L63P, H69K, L89M, I93L	C
Kandathil (2009)	CD06_481	CD06_481	EU683784	None		I15V, G16E, L19I, M36V, R41K, L63T, H69K, I93L	C
	CD06_444	CD06_444	EU683800	None		K14R, I15V, L19I, M36V, R41K, H69K, L89M, I93L	C
	VL06_130	VL06_130	EU744912	None		T12S, I15V, G16E, L19I, M36V, R41K, L63S, H69K, I93L	C
	VL07_123	VL07_123	EU683770	None		T12S, I15V, L19T, K20R, M36V, N37S, R41K, L63P, H69K, I93L	C
Kassaye (2009)	TCDD-6	TC06_2003	FJ445705	None		T12S, K14KR, I15V, L19IT, M36V, R41K, H69K, L89M, I93L	C
		TC06_2004	FJ445725	None		T12S, I15V, L19T, M36V, R41K, H69K, L89M, I93L	C
Rajesh (2009)	N30	TRCNPR30	FJ595393	None		T12S, I15V, L19I, M36V, R41K, L63P, H69K, L89M, I93L	C
	N38	TRCNPR38	FJ595401	None		T12A, I15V, L19T, K20R, M36V, R41K, Q61E, L63P, H69K, L89LM, I93L	C
	N43	TRCNPR43	FJ595406	None		T12S, I15V, L19I, E35T, M36V, N37D, R41K, L63P, H69HQ, A71V, I93L	C
	N51	TRCNPR51	FJ595414	None		T12S, I15V, L19T, M36V, R41K, K45KR, L63P, H69K, L89M, I93L	C
	N56	TRCNPR56	FJ595419	None		T12S, I15V, L19T, M36V, R41K, K45KR, L63P, H69K, L89M, I93L	C
	N21	TRCNPR21	FJ595384	None		T12S, I15V, G16E, L19I, M36V, R41K, I62V, L63H, I64M, H69K, V82I, L89M, I93L	C
	N78	TRCNPR78	FJ595441	None		T12S, I15IV, L19I, M36V, R41K, L63P, H69K, V82I, L89M, I93L	C
	N79	TRCNPR79	FJ595442	None		T12S, I15V, L19I, E35T, M36V, N37D, R41K, L63P, H69HQ, A71V, I93L	C
	N81	TRCNPR81	FJ595444	None		T12S, I15V, L19I, M36V, R41K, L63P, I64L, H69K, I93L	C
	N82	TRCNPR82	FJ595445	None		T12S, I15IV, L19I, M36V, R41K, L63P, H69K, L89M, I93L	C
	N88	TRCNPR88	FJ595451	None		I15V, L19T, M36V, R41RK, L63P, H69K, V82I, L89M, I93L	C
	F9	TRCFPR9	FJ595471	None		M36V, R41K, L63P, H69K, L89M, I93L	C
Tu (2009)	3	PBMC3	EU518253	None		T12S, I15V, L19I, M36V, R41K, D60E, L63P, L89M, I93L	C
		plasma3	EU518302	None		T12S, I15V, L19I, M36V, R41K, D60E, L63P, L89M, I93L	C
	9	PBMC9	EU518257	None		T12S, L19V, M36V, R41K, D60E, L63P, H69K, I93L	C
		plasma9	EU518306	None		T12S, L19V, M36V, R41K, D60E, L63P, H69K, K70KR, I93L	C
	13	PBMC13	EU518260	None		T12S, I15V, L19I, M36V, R41K, D60E, L63P, H69K, L89M, I93L	C
		plasma13	EU518309	None		T12PS, I15V, L19I, M36V, R41K, D60E, L63P, H69K, L89M, I93L	C
	17	PBMC17	EU518264	None		T12S, I15V, L19I, M36V, R41K, D60E, L63P, H69K, L89M, I93L	C
		plasma17	EU518313	None		T12S, I15V, L19I, M36V, R41K, D60E, L63P, H69K, L89M, I93L	C
	23	PBMC23	EU518268	None		T12S, I15V, L19I, M36V, R41K, D60E, Q61E, L63P, I64L, H69K, L89M, I93L	C
		plasma23	EU518317	None		T12S, I15V, L19I, M36V, R41K, D60E, Q61E, L63P, I64IL, H69K, L89M, I93L	C
	26	PBMC26	EU518271	None		T12S, I15V, L19I, M36V, R41K, D60E, L63P, H69K, L89M, I93L	C
		plasma26	EU518320	None		T12S, I15V, L19I, M36V, R41K, D60E, L63P, H69K, L89M, I93L	C
	28	PBMC28	EU518272	None		T12S, I15V, L19I, M36V, R41K, D60E, L63P, H69K, L89M, I93L	C
		plasma28	EU518321	None		T12S, I15V, L19I, M36V, R41K, D60E, L63P, H69K, L89M, I93L	C
	31	PBMC31	EU518274	None		T12S, I15V, L19I, M36V, R41K, D60E, L63P, H69K, I93L	C
		plasma31	EU518323	None		T12S, I15V, L19I, M36V, R41K, D60E, L63P, H69K, I93L	C
	34	PBMC34	EU518276	None		T12S, I15V, L19I, M36V, R41K, D60E, L63P, H69K, L89M, I93L	C
		plasma34	EU518325	None		T12S, I15V, L19I, M36V, R41K, D60E, L63P, H69K, L89M, I93L	C
	39	PBMC39	EU518280	None		T12S, L19I, M36V, R41K, K45R, D60E, L63A, I64L, H69K, L89M, I93L	C
		plasma39	EU518329	None		T12S, L19I, M36V, N37NS, R41K, K45R, D60E, L63A, I64L, H69K, L89M, I93L	C
	46	PBMC46	EU518287	None		T12S, I15V, L19I, M36V, R41K, D60E, L63S, H69K, L89M, I93L	C
		plasma46	EU518336	None		T12S, I15V, L19I, M36V, R41K, D60E, L63P, H69K, L89M, I93L	C
	47	PBMC47	EU518288	None	L33I	T12S, I15V, L19I, M36V, R41K, D60E, L63P, H69K, L89M, I93L	C
		plasma47	EU518337	None	L33I	T12S, I15V, L19I, M36V, R41K, D60E, L63P, H69K, L89M, I93L	C
	48	PBMC48	EU518289	None		T12S, I15V, L19I, M36V, R41K, D60E, L63P, H69K, L89M, I93L	C
		plasma48	EU518338	None		T12S, I15V, L19I, M36V, R41K, D60E, L63P, H69K, L89M, I93L	C
	50	PBMC50	EU518291	None		T12S, I15V, L19I, M36V, R41K, D60E, L63S, H69K, L89M, I93L	C
		plasma50	EU518340	None		T12S, I15V, L19I, M36V, R41K, D60E, L63S, H69K, L89M, I93L	C
Vercauteren (2009)	pt1678	3261721063	GQ399346	None		T12S, I15V, L19T, K20R, M36V, N37E, K43R, H69K, I93L	C
Yu (2009)	001	07CNGD001	FJ387028	None		T12S, I15V, L19I, M36V, R41K, D60E, L63P, H69K, L89M, I93L	C
	002	07CNGD002	FJ387029	None		T12S, I15V, L19I, M36V, R41K, D60E, L63P, H69K, L89M, I93L	C
	004	07CNGD004	FJ387031	None		I15V, L19I, M36V, R41K, D60E, L63P, H69K, L89M, I93L	C
	005	05CNGD005	FJ387032	None		T12S, I15V, L19I, M36V, N37T, R41K, D60E, L63P, H69K, L89M, I93L	C
	006	05CNGD006	FJ387033	None		T12S, I15V, L19T, M36V, R41K, D60E, L63P, H69K, I93L	C
	007	07CNGD007	FJ387034	None		T12S, K14R, I15V, L19I, M36V, R41K, L63P, H69K, I93L	C
	009	07CNGD009	FJ387036	None		T12S, I15V, L19I, M36V, R41K, D60E, L63P, H69K, K70R, L89M, I93L	C
	010	07CNGD010	FJ387037	None		T12S, I15V, L19I, M36V, R41K, D60E, L63P, H69K, L89M, I93L	C
	012	07CNGD012	FJ387039	None		T12S, I15V, L19I, M36V, R41K, D60E, L63P, H69K, L89M, I93L	C
	013	07CNGD013	FJ387040	None		T12S, I15V, L19I, M36V, R41K, D60E, L63P, H69K, K70R, L89M, I93L	C
	016	07CNGD016	FJ387043	None		T12S, I15V, L19I, M36V, R41K, D60E, L63P, H69K, L89M, I93L	C
	019	07CNGD019	FJ387046	None		T12S, L19I, K20R, M36V, R41K, D60E, L63P, H69K, L89M, I93L	C
	020	07CNGD020	FJ387047	None		T12S, I15V, L19I, M36V, R41K, D60E, L63P, H69K, L89M, I93L	C
	022	07CNGD022	FJ387049	None		T12S, I15V, L19I, M36V, R41K, D60E, L63P, H69K, L89M, I93L	C
	024	07CNGD024	FJ387051	None		T12S, I15V, L19I, M36V, R41K, D60E, L63P, I64L, H69K, L89M, I93L	C
	025	07CNGD025	FJ387052	None		I15V, L19T, M36V, R41K, D60E, L63P, H69K, K70R, I93L	C
	027	07CNGD027	FJ387054	None		T12S, I15V, L19I, M36V, R41K, D60E, L63P, H69K, L89M, I93L	C
	028	07CNGD028	FJ387055	None		T12S, I15V, L19I, M36V, R41K, D60E, L63P, H69K, L89M, I93L	C
	030	07CNGD030	FJ387057	None		T12S, I15V, L19I, M36V, R41K, D60E, L63P, H69K, L89M, I93L	C
	032	07CNGD032	FJ387058	None		T12S, I15V, L19I, M36V, R41K, D60E, L63P, H69K, L89M, I93L	C
	033	07CNGD033	FJ387059	None		T12S, I15V, L19I, M36V, R41K, D60E, L63P, C67Y, H69K, I93L	C
	034	07CNGD034	FJ387060	None		T12S, I15V, L19I, M36V, R41K, D60E, L63P, H69K, L89M, I93L	C
	031	07CNGD031	FJ387126	None		T12S, L19I, M36V, R41K, D60E, L63P, H69K, V82I, L89M, I93L	C
Chaturbhuj (2010)	2-007	2-007	FJ878953	None		T12P, K14R, M36V, R41K, D60E, L63P, I64IL, H69K, L89M, I93L	C
Gonzalez (2010)	KLesa10	KLesa10	GQ433826	None		T12S, I15V, L19I, M36V, R41K, H69K, K70R, L89M, I93L	C
Hamers (2010)	300426	CP076300426	HM119850	None		T12S, I15V, G16A, L19I, M36V, R41K, D60E, Q61E, H69K, L89M, I93L	C
Zhang (2010)	0656	CNsd0656	GQ443556	None		I15V, L19I, M36V, R41K, D60E, L63P, H69K, L89M, T91V, I93L	C
	05220	CNsd05220	GQ443564	None		K14R, I15V, L19I, M36V, R41K, D60DE, Q61E, L63P, H69K, L89M, I93L	C
	06169	CNsd06169	GQ443578	None		L19I, M36V, R41K, D60E, L63P, H69K, K70R, L89M, I93L	C
Deshpande (2011)	Pat040	in1124	JF414430	None		T12S, K14R, I15V, L19T, M36V, R41K, Q61QH, H69K, V82I, L89M, I93L	C
	Pat014	in1071	JF414457	None		T12S, K14R, I15V, G16E, L19I, M36V, R41K, Q61H, L63T, I64IL, H69K, L89M, I93L	C
Ng (2011)	FREE005	FREE005	HQ539009	None		I15V, L19I, M36V, N37S, R41K, L63P, H69K, I93L	C
Nwobegahay (2011)	08MB29ZA	08MB29ZA	GU188819	None		T12S, I15V, L19V, M36V, R41K, L63T, H69K, V82I, I93L	C
Su (2011)	GXNN0282	GXNN0282	HQ588292	None		T12S, I15V, L19I, M36V, R41K, D60E, L63P, H69K, L89M, I93L	C
	GXHX0144	GXHX0144	HQ588294	None		T12S, I15V, L19I, M36V, R41K, D60E, L63P, H69K, I93L	C
	GXNN1027	GXNN1027	HQ588295	None		T12S, I15V, L19K, M36V, R41K, D60E, L63P, H69K, L89M, I93L	C
	GXBY0040	GXBY0040	HQ588296	None		T12S, I15V, L19I, M36V, R41K, D60E, L63P, H69K, K70R, L89M, I93L	C
	GXNN0038	GXNN0038	HQ588297	None		T12A, I15V, L19I, M36V, R41K, K45R, D60E, L63P, H69K, L89M, I93L	C
	GXNN2172	GXNN2172	HQ588298	None		T12S, I15V, L19I, M36V, R41K, D60E, L63P, H69K, L89M, I93L	C
	GXNN0019	GXNN0019	HQ588300	None		T12S, I15V, L19I, M36V, R41K, D60E, L63P, H69K, L89M, I93L	C
Thorat (2011)	Pat010	IN-NARI-HIVDR-5-010	HQ166848	None		T12S, I15V, L19T, M36V, R41K, L63P, H69K, L89M, I93L	C
	Pat021	IN-NARI-HIVDR-5-021	HQ166859	None		T12S, I15V, L19IMT, M36V, R41K, L63P, H69K, K70R, L89M, I93L	C
	Pat023	IN-NARI-HIVDR-5-023	HQ166861	None		T12S, K14R, L19I, M36V, R41K, L63P, H69K, K70KR, V82I, L89M, I93L	C
	Pat034	IN-NARI-HIVDR-5-034	HQ166872	None		T12S, I15V, G16A, L19I, M36V, R41RK, Q61QH, L63PS, H69K, V82VI, L89LM, I93L	C
	Pat035	IN-NARI-HIVDR-5-035	HQ166873	None		T12S, K14R, I15V, L19V, M36V, N37D, R41K, D60E, L63P, H69K, I93L	C
	Pat036	IN-NARI-HIVDR-5-036	HQ166874	None		T12S, I15V, L19I, M36V, R41K, L63P, H69K, L89M, I93L	C
	Pat041	IN-NARI-HIVDR-5-041	HQ166878	None		T12S, I15V, L19I, K20R, M36V, P39Q, R41K, I62IV, L63P, H69K, I93L	C
	Pat043	IN-NARI-HIVDR-5-043	HQ166880	None		K14KR, I15V, L19IM, M36V, R41K, L63P, H69K, K70R, L89M, I93L	C
	Pat044	IN-NARI-HIVDR-5-044	HQ166881	None		T12S, K14R, I15V, L19I, M36V, R41K, L63P, H69K, L89M, I93L	C
	Pat051	IN-NARI-HIVDR-5-051	HQ166887	None		T12S, K14R, I15V, L19I, M36V, R41K, L63P, H69K, I93L	C
Zeng (2011)	K15	K15	JF505510	None		T12S, I15V, L19I, M36V, R41K, D60E, L63P, H69K, L89M, I93L	C
	K14	K14	JF505517	None		T12S, I15V, L19I, M36V, R41K, D60E, L63P, H69K, I72T, L89M, I93L	C
	K67	K67	JF505518	None		T12S, I15V, L19I, M36V, R41K, D60E, L63P, H69K, I93L	C
	K68	K68	JF505519	None		T12S, I15V, L19I, M36V, R41K, D60E, H69K, L89M, I93L	C
	K16	K16	JF505520	None		T12S, I15V, L19I, M36V, R41K, D60E, L63P, H69K, L89M, I93L	C
	K46	K46	JF505526	None		T12S, I15V, G16E, L19T, M36V, R41K, D60E, L63P, H69K, A71G, L89M, I93L	C
	K17	K17	JF505527	None		T12S, I15V, L19I, M36V, R41K, D60E, L63P, H69K, L89M, I93L	C
	K25	K25	JF505528	None		I15V, L19I, M36V, R41K, D60E, L63P, H69K, I93L	C
	K28	K28	JF505532	None		T12S, I15V, L19I, M36V, R41K, D60E, L63P, H69K, I93L	C
	K30	K30	JF505578	None		T12S, I15V, L19I, M36V, R41K, D60E, L63P, H69K, L89M, I93L	C
	K71	K71	JF505599	None		T12S, I15V, L19I, M36V, R41K, D60E, L63P, H69K, L89M, I93L	C
	K72	K72	JF505600	None		T12S, I15V, L19I, M36V, R41K, D60E, L63P, H69K, L89M, I93L	C
	K74	K74	JF505602	None		T12S, I15V, L19I, E35D, M36V, R41K, D60E, L63P, H69K, L89M, I93L	C
	K79	K79	JF505607	None		T12S, L19I, M36V, R41K, D60E, L63A, H69K, L89M, I93L	C
	K80	K80	JF505608	None		T12S, I15V, L19I, M36V, R41K, D60E, H69K, L89M, I93L	C
	K81	K81	JF505609	None		T12S, I15V, L19I, M36V, R41K, D60E, L63P, H69K, L89M, I93L	C
Chen (2012)	YN09DH0009	YN09DH0009	JQ658482	None		T12S, I15V, L19I, M36V, R41K, L63P, H69K, K70R, L89M, I93L	C
	YN09DH0044	YN09DH0044	JQ658514	None		T12P, I15V, L19I, E34ED, M36V, R41K, L63P, I93L	C
	YN09DH0045	YN09DH0045	JQ658515	None		I15V, L19IM, M36V, R41K, D60E, L63P, H69K, L89M, I93L	C
	YN09DH0074	YN09DH0074	JQ658543	None		K14R, I15V, L19M, M36V, R41K, I62V, L63P, V82I, I93L	C
	YN09DH0146	YN09DH0146	JQ658603	None		T12S, K14KR, I15V, L19I, M36V, R41K, L63P, H69K, K70R, V82I, L89M, I93L	C
	YN09DH0167	YN09DH0167	JQ658623	None		T12S, I15V, L19T, M36V, R41K, D60E, L63P, H69K, L89M, I93L	C
	YN10DH0083	YN10DH0083	JQ658704	None		T12TA, I15V, L19I, M36V, R41K, L63P, H69K, V82I, L89M, I93L	C
	YN10DH0118	YN10DH0118	JQ658738	None		T12P, I15V, L19I, M36V, R41K, D60E, L63P, H69Q, L89M, I93L	C
	YN10DH0139	YN10DH0139	JQ658758	None		T12A, I15IV, L19IV, M36V, R41K, D60E, L63P, H69K, L89M, I93L	C
	YN10DH0144	YN10DH0144	JQ658763	None		T12S, I15V, L19I, M36V, R41K, D60E, L63PS, H69K, L89M, I93L	C
Hingankar (2012)	IN-NARI-4-004	IN-NARI-4-004	JN314895	None		T12S, K14R, I15V, L19T, M36V, R41K, L63P, H69K, L89LM, I93L	C
	IN-NARI-4-015	IN-NARI-4-015	JN314905	None		T12S, K14KR, I15V, L19I, M36V, R41K, L63P, H69K, V82I, L89M, I93L	C
	IN-NARI-4-019	IN-NARI-4-019	JN314908	None		K14R, I15V, G16E, L19I, K20KR, M36V, R41K, L63T, H69K, V82I, L89M, I93L	C
	IN-NARI-4-043	IN-NARI-4-043	JN314930	None		T12S, I15V, L19I, M36V, R41K, L63P, H69K, V82I, L89M, I93L	C
	IN-NARI-4-044	IN-NARI-4-044	JN314931	None		T12AP, K14R, I15V, L19IM, M36V, R41K, L63PS, H69K, L89M, I93L	C
	IN-NARI-4-052	IN-NARI-4-052	JN314938	None		T12P, I15IV, G16GE, L19I, M36V, R41K, L63P, H69K, L89LM, I93L	C
	IN-NARI-4-066	IN-NARI-4-066	JN314947	None		T12S, K14R, I15IV, L19I, M36V, P39PS, R41K, Q61QH, L63P, H69K, L89M, I93L	C
	IN-NARI-4-070	IN-NARI-4-070	JN314951	None		K14R, L19I, M36V, R41K, L63PT, H69K, V82VI, L89M	C
	IN-NARI-4-071	IN-NARI-4-071	JN314952	None		L10I, T12P, L19I, M36V, R41K, D60E, L63P, C67D, H69K, L89M, I93L	C
	IN-NARI-4-079	IN-NARI-4-079	JN314959	None		T12S, K14R, L19I, M36V, P39T, R41K, R57K, L63P, H69K, V82I, L89M, I93L	C
	IN-NARI-4-099	IN-NARI-4-099	JN314975	None		T12S, K14R, I15V, L19T, M36V, R41K, L63P, H69K, L89LM, I93L	C
	IN-NARI-4-102	IN-NARI-4-102	JN314977	None		T12P, I15V, G16E, L19I, M36V, R41K, L63H, H69K, L89IM, I93L	C
	IN-NARI-4-103	IN-NARI-4-103	JN314978	None		T12PS, I15V, G16E, L19I, M36V, R41K, L63H, H69K, L89M, I93L	C
	IN-NARI-4-105	IN-NARI-4-105	JN314980	None		T12S, K14R, I15V, G16A, L19I, M36V, R41K, L63P, H69K, V82I, L89M, I93L	C
Sinha (2012)	AIIMS-72	AIIMS-72	HQ453389	None		T12S, K14KR, I15V, L19T, M36V, N37D, L63P, H69K, I93L	C
Chen (2013)	11YNHH016	11YNHH016	JX412331	None		T12S, I15V, L19I, M36V, R41K, D60E, L63P, H69K, K70KR, L89M, I93L	C
	11YNHH049	11YNHH049	JX412345	None		T12S, I15V, L19T, M36V, R41K, D60E, L63P, H69K, L89M, I93L	C
	11YNHH011	11YNHH011	JX412330	None		T12S, I15V, L19I, M36V, R41K, D60E, L63P, H69K, I93L	C
	11YNHH006	11YNHH006	JX412326	None		T12S, I15V, L19I, M36V, R41K, D60E, L63P, H69K, I93L	C
	11YNHH005	11YNHH005	JX412325	None		T12S, I15V, L19I, M36V, R41K, D60E, L63P, H69K, L89M, I93L	C
	11YNHH031	11YNHH031	JX412338	None		T12S, I15V, L19I, M36V, N37D, R41K, D60E, L63P, H69K, L89M, I93L	C
	11YNHH033	11YNHH033	JX412339	None		T12S, I15V, L19I, M36V, R41K, D60E, L63P, H69K, L89M, I93L	C
	11YNHH096	11YNHH096	JX412355	None		T12S, I15V, L19I, M36V, N37D, R41K, D60E, L63P, H69K, K70R, L89M, I93L	C
	11YNHH007	11YNHH007	JX412327	None		T12S, I15V, L19I, M36V, N37D, R41K, D60E, L63P, H69K, L89M, I93L	C

Protease Inhibitors

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