Protease Inhibitors

HOME Genotype-Rx Genotype-Pheno Genotype-Clinical hivdb program

Protease Inhibitors

Subtype	B
Gene	PR
Mutation	N88D
Rx	>= 1 PI
IncludeMixtures	No

References	57
Patients	501
Isolates	610

Sequences matching input query are shown below. Original reference, patient identifier, isolate name, partial treatment histories and accession number are indicated. Complete treatment histories, when available, can be accessed by clicking the isolate name. Sequences may additionally be downloaded in the fasta format, or viewed as individual or composite alignments using the options above. If the user wishes to view individual alignments of isolates for which there are multiple clones, the user can choose to view either an alignment of consensus sequences derived from the clones or an alignment of each clone as well as a consensus sequence.

Author (yr)	Patient	Isolate	Acc#	PIs	Wks	PIMajorDRMs	PIMinorDRMs	OtherMut	Subtype
Winters (1997)	KA0011625	1162528862		NFV	138	D30N	N88D	I3V, L10I, E35G, M36I, R41K, L63P, I93L	B
Craig (1998)	Craig-pt15	15W48		SQV	48	I84V, L90M	N88D	M36I, N37D, L63P, A71V	B
Patick (1998)	503-172	503-172W13		NFV	13	D30N	N88D	T12A, D60E, L63P, V77I, I93L	B
	503-192	503-192W34		NFV	34	D30N	N88D	P9X, I13V, E35D, M36I, R57K, I62V, L63P, I64L	B
	503-33	503-33W52		NFV	52	D30N	N88D	I15V, E35D, M36I, N37S, A71T, V75I, I93L	B
	503-113	503-113W48		NFV	48	D30N	N88D	L63P, V77I, I93L	B
	503-143	503-143W12		NFV	12	D30N	N88D	E34D, M36I, N37X, I62V, L63P, I64L, A71T	B
	503-233	503-233W34		NFV	34	D30N	N88D	I15V, G16Q, E35D, M36V, N37D, G40T, R57K, L63P, H69Y	B
	503-353	503-353W31		NFV	31	D30N	N88D	E35D, M36V, N37T, L63P, V77I	B
Gatanaga (1999)	Gat-NR5	agaNR5	AB020920	NFV	72	D30N	N88D	I13V, L63P, C67S, H69K, A71V, V77I	B
Zolopa (1999)	CA1251	CA23169	AY798348	SQV, RTV, IDV, Unknown	>164	V32I, M46I, I47V, I84V, L90M	L10F, L33I, N88D	I13V, E35D, M36I, R41K, L63P, I66V, A71V	B
		CA23171	AY798349	SQV, RTV, IDV, Unknown	>164	V32I, M46I, I47V, I84V, L90M	L10F, L33I, N88D	I13V, E35D, M36I, R41K, L63P, I66V, A71V	B
Atkinson (2000)	BA20	BA20	AF247865	NFV	16	D30N, M46I	N88D	M36I, K45R, L63C, I64V	B
	BA22	BA22	AF247867	NFV	16	D30N, M46I	N88D	L10I, I13V, V77I	B
	BA25	BA25	AF247869	NFV	16	D30N	N88D	I13V, I15V, L19I, R41K, I64V	B
	BA3	BA3	AF247877	NFV	4	D30N	N88D	I15V, E35D, M36I, L63P	B
Bacheler (2000)	LB3-P95	P95-44		IDV	44		N88D	T12K, I15V, L19V, K20M, L63P, H69Q	B
	LB4-P134	P134-65		IDV	12	M46I	L33I, N88D	P39Q, L63P, H69Y, A71T	B
	LB4-P138	P138-79		IDV	47	L90M	N88D	I13V, L63P, A71T	B
Baxter (2000)	GART-G3	GART-3		PI, IDV	NA	M46I, L90LM	N88D	I13V, I15V, L63P, Q92R	B
	GART-NG4	GART-4		PI, NFV	NA	D30N	L10LF, N88D	I13V, L33V, E35D, M36I, I62IV, L63P	B
	GART-NG6	GART-6		PI, NFV	NA	D30N	N88D	L10I, M36I	B
	GART-G27	GART-27		Unknown, NFV	NA	D30N	L10F, N88D	R57K, L63P, V77VI	B
	GART-NG59	GART-59		PI, NFV	NA	D30N	L33F, N88D	N37D, K43R, L63P, A71AT, V77I	B
	GART-G91	GART-91		PI, NFV	NA	D30N	N88D	N37D, L63P, A71T, V77I, I93L	B
	GART-G93	GART-93		PI, NFV	NA	D30N	N88D	L10I, I13IV, T31TP, N37S, L63P, I64V, T74S, V77I, I93L, N98K	B
	GART-NG95	GART-95		Unknown, IDV	NA	M46I	N88D	I13IV, I15V, N37T, R41K, K43N, L63P, V77VI, I93L	B
	GART-NG99	GART-99		PI, NFV	NA	D30N	N88D	I13IV, K14KR, Q61E, L63P, A71V, V77I	B
	GART-NG104	GART-104		PI, NFV	NA	D30N	N88D	I13V, I15V, R57K, L63P, I64V, K70R, A71V, I72E, V77I	B
	GART-G123	GART-123		PI, NFV	NA	D30N	N88D	E35D, R57K, L63P, A71T, V77I, I93L	B
	GART-G132	GART-132		PI, NFV	NA	D30N	N88D	E35D, R57K, L63P, A71V	B
	GART-G134	GART-134		Unknown, IDV	NA	D30N, M46I	L10F, N88D	I13IV, I15V, K20T, M36MI, R57K, L63P, I64V, I72M, V77I, I93L	B
	GART-G136	GART-136		PI, NFV	NA	D30N, M46ML	N88D	K20V, A71V	B
	GART-G148	GART-148		PI, NFV	NA	D30N	N88D	I13IV, I15V, N37C, L63P, V77I	B
Sevin (2000)	SA-090943l	SA-090943l	AF226096	SQV	108	L90M	N88D	I15V, M36I, N37S, R41K, K45R, I62V, L63P, A71T, I93L	B
Shulman (2000)	CA1449	CA9793	AY798398	Unknown, NFV, IDV	>25	D30N	N88D	I15V, E35D, M36V, N37E, I62V, L63P	B
Dunne (2001)	ALD-pt11	ALD-pt11	AF369805	PI	NA	D30N	N88D	I13V, E35D, M36L, I62V, L63Q, I64V, T74S	B
Eshleman (2001)	A108	AF357828	AF357828	NFV	35	D30N	N88D	K14R, I62V, L63P, V77I, I93L	B
Fitzgibbon (2001)	JF-1	JF1-M4	AF442180	NFV		D30N	N88D	M36I, N37S, R57K, L63P	B
		JF1-M12	AF442187	NFV		D30N, L90M	N88D	I13V, E35D, M36I, N37S, R57K, I62V, L63P, A71V, V77I	B
	JF-8	JF8-M10	AF442164	NFV		D30N, M46I	N88D	T12E, K14R, Q61E, L63P, V77I	B
		JF8-M14	AF442171	NFV		D30N, M46I	N88D	T12E, K14R, Q61E, L63P, A71V, V77I	B
	JF-9	JF9-M12	AF442186	NFV		D30N	K43T, N88D	K20T, E35G, M36I, N37S, R57K, L63P, A71V, I85V	B
Gonzales (2001)	CA1417	CA3799	AY030562	NFV, SQV, RTV	87	D30N, I84V	L10F, N88D	L63P, I72IV	B
	CA1496	CA4277	AY030622	NFV, IDV	91	M46I, I54V, V82A	N88D	I13V, E35D, M36I, I62V, L63P, A71V, T74S	B
	CA1529	CA4381	AY030648	IDV, NFV	57	D30N	N88D	I13V, E35D, N37S, R57K, L63P, A71T	B
	CA1535	CA4398	AY030653	NFV, SQV, RTV	91	I54IV, I84IV, L90M	N88D	L10I, I13V, I15V, L63P, I64V, A71V	B
	CA1544	CA4416	AY030661	NFV, SQV, RTV	64	D30N, I84IV, L90M	N88D	L10R, T12P, K14R, L63P, A71T, I72T, V77I, I93L	B
	CA1578	CA4503	AY030677	IDV, NFV	106	D30N	Q58E, N88D	L19T, K20T, E35D, M36I, L63P	B
	CA1582	CA4513	AY030681	IDV, NFV	66	D30N	L10F, N88D	L63P, V77I, I93L	B
	CA1615	CA4918	AY030705	NFV	71	D30N	L10LF, N88D	E35D, M36V, I62IV, L63P, A71AV, I72V, V77I, I93L	B
	CA1798	CA4833	AY030716	SQV, IDV, NFV	153	D30N	N88D	L10I, T12S, I13V, L19I, L63P, E65D, A71T, V77I	B
	CA1827	CA4920	AY030740	NFV, SQV, RTV	76	D30N, I84V, L90M	Q58E, N88D	I13V, K20R, E35D, M36I, N37S, R57K, I62V, L63P, A71T	B
	CA1864	CA4991	AY030768	IDV, NFV	107	D30N	N88D	I13V, M36I, R57K, I62V, L63P, A71T	B
	CA2080	CA7701	AY030788	IDV	133	M46I, V82A	L24I, N88D	L10I, R41K, K45R, K55KR, Q61E, L63P, A71V, I72IT	B
	CA2107	CA7771	AY030814	RTV, IDV, SQV, NFV	94	D30N, L90M	N88D	L10I, I13V, K20R, E35D, M36I, R57K, I62V, L63P, I93L	B
	CA3979	CA9549	AY030978	IDV, SQV, NFV, RTV	120	D30DN, L90M	N88D	K20I, E35D, M36IV, I62V, L63P, H69NT, A71AV	B
	CA3983	CA9562	AY030982	SQV, IDV, NFV	158	D30DN, L90M	N88D	R41K, K43R, K45R, L63P, A71V, I72V, V77I, I85IV, Q92K	B
	CA3986	CA9566	AY030985	IDV, NFV	124	D30N	L10LF, N88D	T12D, K14R, G17GV, E35D, M36I, I62V, L63P, A71I, I85IV, I93L	B
	CA3988	CA9571	AY030987	IDV, NFV	136	D30N	N88D	T12I, N37D, R57K, L63P, V77I	B
	CA4030	CA9727	AY031025	NFV	87	D30N	N88D	E35D, M36I, L63P, I64V	B
	CA4035	CA9748	AY031030	RTV, NFV, Unknown	>77	D30N	N88D	L10I, E35D, M36V, N37Y, R41K, I62V, L63T, A71V, I72V, I93L	B
	CA4036	CA9617	AY031031	NFV	95	D30N	N88D	I15V, K20T, E35D, M36X, N37D, L63P, I85IV	B
	CA4128	CA9834	AY031117	IDV, NFV	114	D30N	N88D	I13V, K20T, L33V, I64V, A71V	B
	CA4153	CA9970	AY031132	RTV, NFV, IDV	166	D30N, L90M	N88D	L10I, I13V, E35D, M36I, R41K, L63P, H69Y, A71T, I72T, Q92K	B
	CA4159	CA9986	AY031136	IDV, NFV	111	D30N	N88D	Q2QH, I13V, L19I, K20I, E35N, M36I, N37D, D60E, Q61E, L63P, A71V, I72T	B
	CA4165	CA10002	AY031142	IDV, NFV	66	D30N	L10F, N88D	T12S, L19Q, L63P, V77VI	B
	CA4166	CA10003	AY031143	NFV	103	D30N	N88D	I13V, E35D, M36I, L63P, A71X, I93IL	B
	CA4338	CA10814	AY031202	NFV	92	D30N	N88D	I15V, K20T, M36I, L63P, A71V, I85V	B
	CA4383	CA10798	AY031241	NFV	50	D30N	N88D	K14R, I15V, K20T, E35D, M36I, R41K, L63P, A71AV	B
	CA4391	CA10806	AY031249	NFV	62	D30N	N88D	I13V, K20R, E35D, M36I, R57K, Q61E, L63P	B
	CA4417	CA10834	AY031271	IDV, NFV, RTV	179	D30N, L90M	L10F, L33F, Q58E, N88D	T12Q, I15V, E35D, M36I, N37ND, R41K, I62V, L63P, I64V, I93L	B
	CA4418	CA10835	AY031272	IDV, NFV	112	D30N	N88D	N37D, R41K, I62V, L63P, V77I, I93L	B
	CA4514	CA11096	AY031353	IDV, RTV, NFV	157	D30N	L10F, N88D	R41K, Q61N, V77I, I93L	B
	CA4519	CA11100	AY031358	Unknown, IDV, NFV	>98	D30N	N88D	L10V, I15V, E34D, M36I, N37D, K45R, L63P, A71T, I72V, Q92S	B
	CA4582	CA11234	AY031379	SQV, IDV, NFV, Unknown	NA	D30N	N88D	E35D, M36I, I62V, L63P, I93L	B
	CA4754	CA11786	AY031415	NFV	14	D30N	N88D	Q7D, L10I, I13V, N37S, L63P, C67S, A71AV, V77I	B
	CA4770	CA11807	AY031430	NFV	105	D30N	N88D	A22AV, L63P, A71V, I72V, V77I, I85IV	B
	CA4816	CA11871	AY031475	IDV, NFV, SQV, RTV	115	D30N, L90M	N88D	L10I, I13V, K14R, I15V, N37D, K45R, I62V, L63P, V77I, I93L	B
	CA4826	CA11887	AY031485	SQV, NFV	181	D30N, L90M	N88D	W6WC, I13V, K20R, E35D, M36I, N37ST, R57K, L63P	B
	CA4854	CA12034	AY031494	NFV	122	D30N, M46ML	N88D	I13V, N37S, L63P, I64V, V77I	B
	CA4871	CA12060	AY031511	IDV, NFV	162	D30N	N88D	L63P, A71T, I72V, V77I	B
	CA4994	CA12583	AY031569	SQV, RTV, NFV	53	D30N	N88D	I13V, E34ED, M36I, R41K, L63P	B
	CA5006	CA12543	AY031581	IDV, SQV, NFV	173	D30N	N88D	I13V, I15V, L19I, L63P, A71AT	B
	CA5047	CA12607	AY031617	NFV	114	D30N, M46I	L10F, Q58E, N88D	I13V, D60E, L63P, I64IV, K70T, V77I, I93L	B
	CA5048	CA12609	AY031618	NFV	110	D30N	N88D	K20R, E35D, M36I, R41K, L63P, A71AT, V77I	B
	CA5051	CA12615	AY031621	NFV	101	D30N	N88D	K20KR, E35D, M36MV, N37E, L63P, A71AV, V77I, I93L	B
	CA5071	CA12635	AY031640	NFV	136	D30N	N88D	I15V, A22V, L63P, A71V	B
	CA5106	CA12668	AY031674	NFV, IDV, RTV	124	D30N	N88D	T12K, I13IV, K20T, E35D, M36I, R41K, I62V, L63H, A71V, I93L	B
	CA5161	CA12747	AY031727	Unknown, NFV, RTV, IDV	NA	D30N	N88D	L63P, V77I, I93L	B
	CA5200	CA12778	AY031763	NFV	75	D30N	N88D	I13V, E35D, M36I, R41K, I62V, L63S, A71V	B
	CA5204	CA12783	AY031767	NFV	49	D30N	L10LF, N88D	Q2QK, L5LF, G16A, R57K, Q61H, L63P, H69Q	B
	CA5207	CA12789	AY031770	IDV	206	L90M	N88D	L10I, I15V, Q18H, N37D, K45R, R57K, D60E, I62V, L63P, I66L, A71T, I72M, V77I, I93L	B
	CA5244	CA12882	AY031801	NFV	59	D30N	N88D	I13V, L63P, A71AV, V77I	B
	CA5280	CA12988	AY031837	IDV, NFV	169	D30N	N88D	I15V, R41K, R57K, L63P, V77VI, I85IV, I93L	B
	CA5342	CA13221	AY031896	NFV	90	D30N	N88D	I13V, L63LP, I64V, A71V, V77I	B
	CA5348	CA13232	AY031902	NFV	107	D30N	L10F, N88D	E35D, M36I, R41K, L63P, V77I, I93L	B
	CA5374	CA13260	AY031929	NFV	127	D30N	N88D	I13V, E35D, M36I, N37D, L63P, V75I	B
	CA5377	CA13263	AY031932	NFV	92	D30N	N88D	L10V, I13V, G16A, E35D, M36I, N37D, L63P	B
	CA5410	CA13306	AY031964	IDV, SQV, NFV	171	D30N	N88D	L10I, K43R, Q61E, L63P, T74S, V77I, I93L	B
	CA5483	CA24825	AY032022	SQV, RTV, NFV	119	D30N	N88D	A22V, N37S, I62V, L63P, A71V, I72V, V77I	B
	CA5543	CA13768	AY032053	NFV	45	D30N	N88D	R57K, L63P, V77I, I93L	B
	CA5697	CA14569	AY032099	NFV, SQV	88	D30N, L90M	L10F, N88D	K45KR, L63P, I64V, I93L	B
	CA5720	CA14249	AY032112	NFV	119	D30N	N88D	L10I, I64V, A71V, V77I, I93L	B
	CA5752	CA14290	AY032142	IDV, NFV	194	D30N	N88D	L10I, I13V, E35D, M36I, N37D, L63P, I93L	B
	CA5758	CA14299	AY032148	NFV	28	D30N	N88D	N37X, L63P, V77I, I93L	B
	CA5948	CA14858	AY032197	NFV	52	D30N	N88D	I13V, K14R, I15V, E35X, M36I, L63P, A71AV, I72V	B
	CA5954	CA14899	AY032202	NFV	127	D30N	N88D	L10LI, I13V, N37A, I62V, L63P, A71T, V77I	B
	CA5965	CA14878	AY032212	IDV, NFV	208	D30N	N88D	I13V, L63P, A71T, V77I	B
	CA6007	CA14915	AY032250	NFV, IDV	137	M46L, L90M	N88D	L10I, I13V, Q18QH, N37D, K55KR, L63P, I66F, A71V, V77I	B
		CA64625	FJ983194	NFV, IDV, RTV, ATV	466	M46L, I84V, L90M	L10F, L33I, N88D	I13V, Q18H, K20KR, M36MI, N37D, K55R, D60E, I62V, L63P, I66F, A71V, I72T, T91TS	B
	CA6031	CA14966	AY032274	NFV, SQV, RTV	132	D30N, I54V, L90M	L10F, N88D	I15V, L63P, V77I, I93L	B
	CA6372	CA16127	AY032329	NFV	86	D30N	L10LF, N88D	L5LF, L63P, I64V, A71V, V77I	B
	CA6418	CA16187	AY032372	NFV, SQV, RTV	146	D30N	F53L, N88D	E35D, M36I, N37S, L63P, I66L, A71T, V75I	B
	CA6423	CA16197	AY032377	IDV, NFV, SQV, RTV	191	D30N, M46I, I54V	F53L, N88D	L10I, I13V, K20R, E35D, M36I, L63P, A71T, I93L	B
	CA6459	CA16238	AY032410	NFV	66	D30N, M46I	N88D	N37D, I62V, L63A, V77I, I93L	B
	CA6483	CA16273	AY032434	NFV, SQV, RTV, APV	115	M46L, I54L, I84V, L90M	L33F, N88D	L10V, I13V, E34K, R41K, D60DE, L63P, V77I	B
	CA6557	CA16481	AY032463	SQV, NFV	200	D30N	L33LF, N88D	D60E, A71V, V77I	B
	CA6559	CA16483	AY032465	IDV, NFV	133	D30N, M46I	N88D	R41K, V77I	B
	CA6564	CA16489	AY032470	NFV	101	D30N, M46I	N88D	I64IV, V77I, I93L	B
	CA6570	CA16515	AY032476	IDV, NFV	101	D30N	N88D	I13IV, K20KT, L63P, A71AV, V77I, I93IL	B
	CA6584	CA16506	AY032490	NFV	88	D30N	L10LF, N88D	L19I, N37C, I62V, L63A, A71AT, V77I, I93L	B
	CA6589	CA16528	AY032495	NFV, IDV, SQV, RTV	120	D30N, I54V, L90M	L10F, L33I, N88D	K20R, E35D, M36I, R57K, L63P, C67CY, A71AT, I93L	B
	CA6605	CA16554	AY032510	NFV	130	D30N	N88D	E35D, M36I, L63P, V75I, I93L	B
	CA6615	CA16569	AY032520	NFV	165	D30N	L10F, N88D	N37ND, L63P, I64V, I72V, V77I, I93L	B
	CA6798	CA17089	AY032531	SQV, IDV, NFV	214	D30N	L33F, N88D	R8RQ, L63P, I93L	B
	CA6805	CA17105	AY032538	IDV, NFV	160	D30N	N88D	I13V, K20R, E35D, M36I, N37E, R57K, L63P, A71T, I93L	B
	CA6832	CA17000	AY032564	NFV	128	D30N, L90M	L10LF, N88D	Q2QK, L5X, Q61E, L63P, V77I, I93L	B
Kempf (2001)	DK-3143	DK-3143		NFV	68	D30N, L90M	L33I, N88D	I13V, L19V, E35D, M36I, P39Q, I62IV, L63P, I64V, A71T	B
	DK-4904	DK-4904		NFV	57	D30DN	N88D	N37ND, A71AT, V77VI	B
	DK-5454	DK-5454		NFV	51	D30N	L10LF, N88D	T31TP, P39PS, R41K, K45KQ, I64V, A71AV	B
	DK-8704	DK-8704		NFV	54	D30N	N88D	I13V, L63P, A71AT, I72IV, V77I	B
	DK-8873	DK-8873		NFV	76	D30N	N88D	L10I, L63T, I64V, E65D, A71V, V77VI	B
Brindeiro (2002)	TVSP7	TVSP7	AY145808	RTV, NFV	34	D30N	N88D	T12A, I13V, L19I, M36I, R41K, K43R, L63P, A71V, I93L	B
Kantor (2002)	CA624	CA9984	AY047380	NFV, SQV, RTV	58	D30N, I54V, L90M	L33LI, N88D	I13V, K20R, E35D, M36I, L63P, A71AT	B
	CA1329	CA11767	AY047419	IDV, NFV, SQV, RTV	139	D30N, I84V, L90M	L33F, K43T, N88D	I15V, E35D, M36L, N37E, D60E, I62V, L63P	B
	CA1436	CA21346	AY047427	NFV, IDV	133	D30N, M46I, L90LM	N88D	K20I, D60DE, L63P, A71T, I72IT, V77I, I85IV, I93L	B
	CA1530	CA9799	AY047437	NFV, SQV, RTV	90	D30N, M46MI, I54L, L90M	F53FL, N88D	L10V, T12S, I15V, L19V, K20T, L63P, I66F, A71V	B
	CA3929	CA16486	AY047455	IDV, RTV, NFV, APV	204	D30N, M46L	L33F, N88D	I13V, E34D, M36I, L63P, A71T	B
	CA4305	CA21351	AY047462	RTV, NFV, IDV	194	M46I, V82A	N88D	I15V, E35D, M36I, N37D, L63P, I64IV, A71AV, V75I	B
	CA4514	CA16216	AY047472	IDV, RTV, NFV	199	I54V, L90M	L10F, N88D	E34EQ, R41K, Q61N, L63P, V77I, I93L	B
Margot (2002)	MM-377036830	3770368301		PI	NA	D30N	N88D	K14R, I15V, K20T, E35ED, M36I, N37D, I64V, K70KR, A71V, R87RG	B
	MM-537136600	5371366001		PI	NA	D30N	N88D	T12S, I13V, L63P, I64V, A71V, V77I	B
	MM-410036833	4100368331		PI	NA	D30N	N88D	I13V, L63P, A71AT, V77I, I93L	B
	MM-304036676	3040366761		PI	NA	D30N	N88D	L10V, I13IV, G16E, L19I, E35D, M36I, I62V, L63S, I72V	B
	MM-401136805	4011368051		PI	NA	D30N	N88D	T12D, L19I, K20V, I62V, L63P, A71T, T74S, V77I, I85V	B
	MM-410836850	4108368501		PI	NA	D30N	L10F, L33F, N88D	E35D, M36L, N37C, R41K, R57K, D60E, I62V, L63Q, I64V	B
	MM-228136683	2281366831		PI	NA	D30N	N88D	R41K, R57K, I62V, L63P, V77I, I93L	B
	MM-352136759	3521367591		PI	NA	D30N	N88D	L33V, E35D, M36I, R41K, L63P, I64V, V75I	B
	MM-335436594	3354365941		PI	NA	D30N	N88D	I13V, M36I, L63P, H69Y, A71V, I93L	B
	MM-405036789	4050367891		PI	NA	D30N, I54V, L90M	L10F, L33I, N88D	I13V, E35D, M36I, I62IV, L63P, A71T, I72IT, I93L	B
	MM-220236677	2202366771		PI	NA	D30N, L90M	N88D	I13IV, E35D, M36V, I62V, L63P, A71V, I72V, V77I	B
	MM-315236587	3152365871		PI	NA	D30N, I54V	L10F, N88D	E35D, M36I, R41K, L63P, I93IL	B
	MM-521236621	5212366211		PI	NA	D30N	N88D	E35D, M36I, R41K, K45R, L63P, I66V, V77I, I93L	B
	MM-302736703	3027367031		PI	NA	D30N	N88D	I13V, K14R, L19I, K20KR, E35D, M36I, N37D, R57K, D60E, L63P	B
	MM-235136685	2351366851		PI	NA	D30N	N88D	I13V, K14R, Q18E, I62V, L63N, I64M, A71V, V77I, I93L	B
	MM-301336678	3013366781		PI	NA	D30N	N88D	L10I, I62V, L63P, A71T, V77I, I85V, I93L	B
	MM-224136776	2241367761		PI	NA	D30N	I50IT, N88D	R41K, K45R, L63P, I93L	B
	MM-533436761	5334367611		PI	NA	L90M	N88D	L10V, K14KR, I15V, M36I, N37D, L63P, A71V	B
Masquelier (2002)	apv1	apv1M12	AY133491	NFV	52	D30N	N88D	I15V, L23LF, E35D, M36MI, N37S, R57K, D60E, I62V, L63P, I93NT	B
	apv4	apv4M6	AY133496	NFV	24	D30N	N88D	T12V, L33V, N37A, R41K, R57K, D60E, L63P	B
		apv4M8	AY133497	NFV	32	D30N	L33IV, N88D	T12IV, I13IV, M36MI, N37A, R41K, R57K, D60E, L63P	B
Podzamczer (2002)	64	BAA139855		NFV	4	D30N	N88D	I13V, M36MI, K45KR, I62V, L63P, H69Q, Q92K	B
		BAA139856		NFV	13	D30N	N88D	I13V, M36MI, K45KR, I62V, L63P, H69Q, A71AT, Q92K	B
Tural (2002)	42476	42476		IDV, NFV, RTV	129	M46L, V82A, L90M	N88D	L10I, I13V, L63P, A71V	B
	57699	57699		IDV, NFV	59	D30N	N88D	I62V, L63S, A71V, V77I, I93L	B
	289461	289461		SQV, IDV, NFV	118	D30N	N88D	I13V, L63P, A71T, V77I	B
	368685	368685		SQV, NFV	126	D30N	N88D	I13V, L33V, P39S, L63P, H69Q, A71I, I85V	B
	880307	880307		NFV	54	D30N	N88D	L10V, I15V, K20T, E35D, M36V, N37S, R41K, L63P, I85V	B
	881302	881302		IDV	80		N88D	L5H, R41K, K45R, R57K, L63P, A71T	B
Venturi (2002)	GV-17	GV-17.1	AF517269	IDV	47	M46I	N88D	I15V, R41K, L63P, I93L	B
	GV-42	GV-42.1	AF517294	NFV	76	D30N	N88D	I13V, I62V, L63S, I64M, A71V, V77I	B
	GV-49	GV-49.1	AF517301	NFV		D30N	N88D	I13V, K14R, I62V, L63P, H69Q, I72M	B
Gonzales (2003)	CA1251	CA11879	AY305979	SQV, RTV, IDV	164	I84V, L90M	L33I, N88D	L10I, I13V, E35D, M36I, R41K, L63P, I66IF, A71V	B
	CA3953	CA24638	AY305985	SQV, NFV, IDV, RTV	268	D30N	N88D	E35D, M36I, L63P	B
	CA4305	CA24552	AY305980	RTV, NFV, IDV, SQV	229	M46I, I54V, V82A	N88D	I15V, E35D, M36I, N37D, L63P, A71V, V75I	B
	CA5006	CA24398	AY305976	IDV, SQV, NFV, APV	263	I54L, L90LM	L33F, N88D	I13V, I15V, L19I, I62V, L63P	B
	CA6405	CA24329	AY305998	IDV, RTV, NFV	270	D30N	L10F, N88D	I13V, I15V, Q18Q*, N37T, R57K, L63P, I93L	B
Monno (2003)	ML_Pat30	ML_Pat30		PI	NA	D30N	N88D	I15V, L19T, K20T, E35D, M36I, I62V, L63P, H69N	B
	ML_Pat31	ML_Pat31		PI	NA	D30N	N88D	I13V, I15V, G16A, L19I, K20T, M36I, H69K, A71V, V77I	B
	ML_Pat33	ML_Pat33		PI	NA	D30N, M46I	N88D	L63P, H69N, V77I	B
	ML_Pat43	ML_Pat43		PI	NA	D30N	N88D	K20I, E35D, M36I, I62V, L63P, A71V, T74A	B
	ML_Pat45	ML_Pat45		PI	NA	D30N	N88D	E35ED, M36MI, N37D, K45KR, L63LP, A71V, I72E, V77I, I93L	B
	ML_Pat46	ML_Pat46		PI	NA	D30N	N88D	E35D, M36V, N37E, I62IV, L63P, H69N, A71V, I72V, V77I	B
	ML_Pat48	ML_Pat48		PI	NA	D30N	N88D	E35D, M36V, N37T, R41RK, I62V, L63LP, A71V, I72T, T74TA, I93L	B
	ML_Pat58	ML_Pat58		PI	NA	D30N, M46L	N88D	I13V, I62V, L63P, C67D, H69K, A71V, T74S, V77I, I93L	B
	ML_Pat59	ML_Pat59		PI	NA	D30N	L10F, N88D	I13V, K20R, E35D, M36I, I62V, L63P, I64L, T74S, L89I	B
	ML_Pat66	ML_Pat66		PI	NA	D30N	L10LF, N88D	I13IV, I15IV, K20VATM, N37ND, L63P, H69N, A71V, V77I	B
	ML_Pat69	ML_Pat69		PI	NA	D30N	L33LF, N88D	T12TS, I13IV, K14KR, L19I, K20KT, M36X, I62V, L63P, A71AV, T74S, V77VI, L90X	B
Saah (2003)	AS-15	AS-15		NFV	65	D30N	N88D	I13V, K14R, L63P, V77I	B
	AS-16	AS-16		NFV	65	D30N	N88D	E35D, M36I, N37S, L63P, A71T, V77I	B
	AS-18	AS-18		NFV	55	D30N	N88D	I13V, E35D, M36I, R41K, I62V, L63P, A71T	B
	AS-19	AS-19		NFV	50	D30N	N88D	L63P, I64V, V77I, I93L	B
	AS-23	AS-23		NFV	56	M46I	N88D	L10I, N37S, D60E, I62V, L63A, V77I, I93L	B
	AS-25	AS-25		NFV	106	D30N	N88D	I13V, E35D, M36I, N37C, I62V, L63P, I72T	B
	AS-26	AS-26		NFV	52	D30N	N88D	Q61E, I62V, L63P, V77I, I93L	B
	AS-27	AS-27		NFV	64	D30N	N88D	T12A, K14R, I15V, R57K, I62V, L63P, V77I, I93L	B
	AS-28	AS-28		NFV	84	D30N	N88D	I13V, Q18L, N37S, L63P, A71V	B
	AS-29	AS-29		NFV	72	D30N	N88D	I13V, Q18L, N37S, L63P, A71V	B
	AS-30	AS-30		NFV	96	D30N	N88D	N37S, I62V, L63P, A71T, V77I, I93L	B
	AS-31	AS-31		NFV	44	D30N	N88D	E35D, M36V, N37D, L63P, I93L	B
Shafer (2003)	A384_3616	3616b	EF548806	NFV	32	D30N	L76LI, N88D	L10I, K14KM, L63A, A71AV, G73GV, V77I, I93L	B
	A384_1486	1486c	EF548878	NFV	94	D30N	N88D	L10I, I13V, K14R, E35ED, M36I, R41K, K45R, I62V, L63S, I64MV	B
Wu (2003)	CA1503	CA20459	AF544495	SQV, IDV, NFV	107	D30N	N88D	I13IV, E35ED, M36MI, N37NS, L63X, I64IV, A71V, V77I, I93IL	B
	CA1615	CA12094	AF544505	NFV	124	D30N	L10F, N88D	E35D, M36V, I62V, L63P, I72V, V77I, I93L	B
	CA2197	CA7971	AF544530	RTV, IDV	139	V82A	N88D	L10I, I15V, L19M, K20M, M36MI, L63P, H69Q, A71AV, V77I, I93L	B
	CA4165	CA13322	AF544551	IDV, NFV	95	D30N	L10F, N88D	I3IN, T12S, I13X, L19Q, L63P, A71T, V77I	B
	CA4514	CA20511	AF544565	IDV, RTV, NFV	233	I54V, V82C, L90M	N88D	L10I, E34Q, R41K, Q61N, L63P, V77I, I93L	B
	CA4795	CA20457	AF544572	NFV	118	D30N	N88D	L63P, A71AT, V77I	B
	CA4816	CA20370	AF544574	IDV, NFV, SQV, RTV, APV, LPV	179	D30DN	N88D	L10I, I13IV, K14R, I15V, N37D, K45KR, I62V, L63P, H69HY, V77I, L90X, I93L	B
	CA5532	CA20394	AF544589	Unknown, NFV	>146	D30N	N88D	L10I, I13V, I15V, M36MV, N37S, P39S, K45KR, R57K, L63P, I64V, A71V, I93L	B
	CA6372	CA16296	AF544594	NFV	92	D30N	N88D	L63P, I64V, A71AV, V77I	B
	CA6805	CA21436	AF544599	IDV, NFV, SQV	201	D30N, I54IL, L90LM	N88D	I13V, K20R, E35D, M36I, N37E, R57K, L63P, A71T, I93L	B
	CA7989	CA20489	AF544607	NFV	172	D30N	N88D	L10I, A22V, L63P, A71V, I72V, V77I, L89LIM, I93L	B
	CA8022	CA20534	AF544609	SQV	310	I54V, L90M	L23I, N88D	L10I, I13V, M36MI, N37ND, L63P, A71V, I72V, T74S	B
	CA9430	CA23152	AF544619	NFV, APV	245	D30N, I50V	L33F, N88D, L89LV	I13V, E34D, E35D, M36I, K43KQ, L63P, I66IF, H69Q, A71AT	B
Colonno (2004)	RC-009-012-015	012-01511		NFV		D30N	L10F, L33I, N88D	I13V, E35D, M36I, N37D, L63P, I64V, H69Y, A71V, V77I	B
		012-01521		NFV, SQV, ATV	30	D30N, I84V	L10F, N88D	K20R, E35D, M36V, N37D, L63P, H69Y, K70E, A71V, V77I	B
	RC-009-008-089	008-08911		NFV		D30N	L10F, M46V, N88D	R8Q, T12A, I13V, E35D, M36I, I62V, L63P, I64L, A71T, V77I	B
		008-08921		NFV, SQV, ATV	29	D30N, I54L, I84V	L10F, L33I, F53L, N88D	T12A, I13V, E35D, M36I, D60E, I62V, L63P, I66V, A71T, I85V, I93L	B
	RC-810024D	24D11		NFV		D30N	L10F, L23I, N88D	I13V, N37S, R41K, I62V, L63P, K70R, A71T, I93L	B
		24D21		NFV, SQV, ATV		D30N, I50L	L10F, N88D	I13V, N37S, R41K, I62V, L63P, K70R, A71T, I93L	B
	RC-009-007-064	007-06411		NFV		D30N	L33F, N88D	K14R, I15V, R41K, D60E, Q61N, L63T	B
	RC-008-039-230	039-23021		NFV	79	D30N	L10F, N88D	T12S, L19Q, K20R, L63P, V77I, L89I	B
	RC-009-017-078	017-07811		NFV		D30N, L90M	N88D	E35D, M36I, N37D, L63P, H69Q, A71V, I93L	B
		017-07821		NFV, SQV, ATV	28	D30N, I54L, L90M	N88D	L10R, E35D, M36I, N37D, K45R, L63P, H69Q, A71V, I93L	B
	RC-009-017-005	017-00511		NFV		D30N	L10F, L33I, N88D	I13V, I15R, E35D, M36I, R41K, L63P, I64V	B
		017-00521		NFV, SQV, ATV	28	D30N	L10F, L33I, N88D	I13V, K14R, E35D, M36I, R41K, I64V	B
Dumans (2004)	227	227	AY390068	NFV	113	D30N	N88D	L10I, I13V, I62V, L63P, I66F, A71T, V77I	B
	230	230	AY390085	NFV	168	D30N	N88D	I15V, G17E, K20T, E35D, M36I, K45R, R57K, D60E, Q61D, L63P	B
	198	198	AY390045	RTV, NFV	102	D30N	N88D	E35D, M36I, N37D, R57K, L63P, I64V	B
	208	208	AY390064	NFV	67	D30N, M46I	N88D	L10I, N37S, R41K, L63P, K70R, V77I	B
Gomez-Carrillo (2004)	94967	94967	AY365507	PI	NA	D30N	N88D	Q7QH, T12D, L19I, K20R, M36I, R41K, I62V, L63P, I93L	B
	96981	96981	AY365537	PI	NA	D30N	N88D	E35ED, N37E, K55R, R57KN, L63P, H69N, A71V, V77I	B
	98722	98722	AY365579	PI	NA	D30N	N88D	I15V, K20T, E35D, M36V, I62V, L63A, A71V, I72A, V77I, I93L	B
	98854	98854	AY365585	PI	NA	D30N, M46I	L33F, N88D	N37D, L63Q, I93L	B
	98908	98908	AY365590	PI	NA	D30N	L10F, N88D	N37E, R41K, D60E, I62V, L63P, V77I, I93L	B
	99295	99295	AY365596	PI	NA	D30N	L33F, N88D	I13V, K14R, K20R, E35D, M36I, I62V, L63P	B
	99634	99634	AY365601	PI	NA	D30N	N88D	L10V, K14R, E35D, M36V, L63P, A71V	B
	102600	102600	AY365656	PI	NA	D30N	N88D	T12TA, I13V, Q18QH, L19I, N37S, I64V, A71V, V77I	B
	104667	104667	AY365709	PI	NA	D30N	N88D	L10LI, I13V, K14KR, I15V, I62V, L63P, V77I, Q92E	B
	104827	104827	AY365713	PI	NA	D30N	N88D	L10V, L63A, A71V, V77I, I93L	B
	105885	105885	AY365739	PI	NA	D30N, M46I, L90M	N88D	K14R, N37D, R57K, L63P, A71T, I72V, V77I, I93L	B
	106393	106393	AY365749	PI	NA	D30N	N88D	I3V, L10I, E35D, M36I, N37V, L63P	B
	106547	106547	AY365753	PI	NA	D30N	N88D	L63P, V77I, I93L	B
	109115	109115	AY365806	PI	NA	D30N	N88D	T12N, L19I, K20T, E35N, M36I, R57K, D60DE, Q61DG, A71V	B
	113233	113233	AY365870	PI	NA	D30N	N88D	L10I, E35D, N37T, L63P, I64V, I93L	B
	115552	115552	AY365919	PI	NA	D30N, M46I, V82A	L24I, K43T, N88D	L10I, T12N, N37H, R41K, L63P, I64V, V77I	B
	124878	124878	AY366035	PI	NA	D30N, I84V, L90M	N88D	I13V, L19I, K20R, E35D, M36I, N37S, K45R, L63P, H69Q, A71V	B
Grossman (2004)	IL309	IL309b	AY529585	NFV	99	D30N, M46I	N88D	I13S, K20KT, D25DN, L63LP, I66IF, A71AV, V77I	B
Machado (2004)	cs195	cs195	AY313359	NFV	128	D30N, M46I	L33F, N88D	I15V, K20I, R57K, D60E, L63P	B
	cs200	cs200	AY313362	RTV, Unknown, NFV	>150	D30N, M46I	N88D	I13V, I15V, K20T, L63P, H69Q, V77I	B
	cs134	cs134	AY313343	NFV	214	D30N	L10F, N88D	T12N, L19V, K20I, E35D, M36I, I64V, A71V, C95S	B
Montes (2004)	MB_patSAR	02_SAR732	AJ577994	NFV	52	D30N	L33I, N88D	L10I, I15L, Q61E, L63P	B
	MB_patFRE	00_FRE705	AJ577893	SQV, NFV	162	D30N	N88D	I15V, E35G, M36I, N37D, L63P, V75I, I93L	B
	MB_patBOUI	01_BOUI703	AJ577744	RTV, IDV, NFV, SQV	256	D30N	N88D	L10I, L63P, I64L, H69Q, T74S, V77I	B
	MB_patMAR	00_MAR712	AJ577943	SQV, NFV	135	D30N, M46I	N88D	L19I, N37S, R41K, K45Q, V77I	B
	MB_patDEP	01_DEP716	AJ577877	NFV	131	D30N	L10F, N88D	E35D, M36I, R57K, I62V, L63P, H69Q	B
Rhee (2004)	CA4164	CA14934	AY798488	IDV, NFV	94	D30N	N88D	I15V, E35D, M36I, N37D, L63P, I93L	B
Garcia-Bujalance (2005)	GBS_17	GBS_17	AY872298	NFV		D30N	N88D	I13V, K14R, I15V, K20R, E35D, M36I, R41K, L63P	B
	GBS_24	GBS_24	AY872305	NFV		D30N	N88D	I62V, L63P, V75VI, V77I, I93L	B
	GBS_26	GBS_26	AY872307	RTV, NFV		D30N	N88D	L10I, E35D, M36I, R41K, Q61E, I62V, L63P, I64L, I93L	B
	GBS_27	GBS_27	AY872308	IDV		D30N	N88D	L10I, E35D, M36I, R41K, Q61E, I62V, L63P, I64L, I93L	B
	GBS_29	GBS_29	AY872310	IDV, NFV	293	D30N	L10F, Q58E, N88D	W6WL, I13V, L63P, V77I, I93L	B
	GBS_02	GBS_02	AY872283	RTV		D30N	N88D	I13V, L33V, L63P	B
	GBS_40	GBS_40	AY872321	NFV		D30N	L10F, N88D	V11F, I13V, I15V, K20T, M36I, R41K, I62V, L63P, I64L, C67W, A71V, V77I	B
	GBS_52	GBS_52	AY872333	IDV, NFV		D30N	N88D	I13V, I15V, K20T, E35D, M36L, N37E, R57K, I62V, L63P, A71V	B
Rhee (2005)	CA624	CA3096	AF085089	NFV	28	D30N	N88D	I13V, E35D, M36I, L63P	B
	CA1251	CA3130	AY796556	SQV, RTV, IDV	70	I84V, L90M	N88D	L10I, E35D, M36I, R41K, L63P, A71AV	B
	CA1329	CA39038	AY798416	IDV, NFV, SQV, RTV, Unknown	>139	D30N, I84V, L90M	L10F, L33F, K43T, N88D	I15V, E35D, M36L, N37E, D60E, I62V, L63P	B
	CA1417	CA14658	AY796660	NFV, SQV, RTV	105	D30N, I84V	L10F, L33F, N88D	L63P, A71T, I72V	B
	CA1436	CA12588	AY796682	NFV	57	D30N	N88D	R41K, I62IV, L63A, I64IM, A71AT, V77I	B
	CA1449	CA16101	AY796689	Unknown, NFV, IDV, SQV	>74	D30N, L90LM	N88D	I15V, E35D, M36V, N37E, I62V, L63P	B
		CA20648	AY796691	Unknown, NFV, IDV, SQV	>120	D30N, I54V, L90M	N88D	I15V, E35D, M36V, N37E, R41RS, W42WC, I62V, L63P, A71X	B
	CA1451	CA11803	AY796699	Unknown, IDV, NFV	>79	D30N	L10F, N88D	I15V, K20KT, E35D, M36V, R57K, L63P, I93L	B
		CA13931	AY796700	Unknown, IDV, NFV	>102	D30N	L10F, N88D	I15V, K20KT, E35D, M36V, R57K, L63P, I85IV, Q92QR, I93L	B
	CA1503	CA13941	AY796744	SQV, IDV, NFV	124	D30N	L33LF, N88D	I13IV, L63A, A71V, V77I, I93L	B
	CA1530	CA4383	AY796756	NFV	49	D30N	N88D	L10V, T12S, I15V, L19V, K20T, L63P, A71V	B
	CA2204	CA7987	AY796892	NFV	39	D30N	N88D	R41K, I62V, L63P, V77I, I93L	B
		CA20547	AY796893	NFV, IDV, APV	141	M46L, L90M	L10F, N88D	R41K, I62V, L63P, V77I, I85V, I93L	B
		CA24295	AY796894	NFV, IDV, APV, RTV	168	M46I, I84V, L90M	N88D	R41K, I62V, L63P, V77I, I93L	B
		CA33562	AY798421	NFV, IDV, APV, RTV	209	M46I, I84V, L90M	L10F, L33F, N88D	I15V, R41K, I62V, L63P, I66L, V77I, I93L, C95F	B
	CA3920	CA9693	AY796947	IDV, NFV	113	D30N	N88D	I13V, N37CS, L63P, I64V, A71V, V77I	B
	CA3929	CA9694	AY796949	IDV, RTV, NFV	142	D30N	N88D	I13IV, E34D, M36I, L63P, A71V	B
		CA23857	AY796950	IDV, RTV, NFV, APV	286	D30N, M46L	L24LI, L33F, N88D	I13V, E34D, M36I, L63P	B
	CA4007	CA11019	AY796988	NFV	12	D30N	N88D	I13V, E35ED, M36MI, L38LF, L63P, A71AV, V77I	B
	CA4030	CA12114	AY797000	NFV	94	D30N	N88D	E35D, M36I, L63P, I64V	B
	CA4111	CA39061	AY797018	IDV, NFV, Unknown	>165	D30N	N88D	I15V, K20T, E35D, M36V, P39Q, L63P	B
	CA4154	CA24099	AY797025	IDV, NFV	258	D30N	N88D	I13V, L63P, V77I, I93L	B
	CA4159	CA33556	AY797026	IDV, NFV, SQV, RTV	265	D30N, I54V, L90M	L10LF, V11I, F53L, Q58E, N88D	I13V, L19I, K20I, E35N, M36I, N37DE, D60E, Q61E, L63P, A71V, I72T	B
	CA4164	CA24045	AY797027	IDV, NFV, RTV	175	D30DN	N88D	I15V, E35D, M36I, N37D, I62V, L63P, I72IV, I93L	B
		CA33733	AY797028	IDV, NFV, RTV, APV, SQV	214	D30DN	N88D	I15V, E35D, M36I, N37D, I62IV, L63P, I72IV, I93L	B
		CA48165	AY797029	IDV, NFV, RTV, APV, SQV, ATV	265	D30N, I54V	L10F, G73S, N88D	I13V, I15V, K20T, E35D, M36I, N37D, I62V, L63P, V77I, I93L	B
	CA4391	CA14820	AY797073	NFV	74	D30N	N88D	I13V, K20R, E35D, M36I, R57K, Q61E, L63P	B
		CA33921	AY797074	NFV, SQV, RTV	201	D30DN, I84IV, L90LM	F53L, N88D	I13V, K20R, E35D, M36I, R57K, Q61E, L63P, A71AV	B
	CA4439	CA10857	AY797093	IDV, NFV	116	D30N	L10F, N88D	K20T, E35G, M36I, I62V, L63P, H69HN, A71V	B
	CA4450	CA33665	AY797097	IDV, NFV	192	D30N, L90LM	N88D	I13V, E35D, M36I, D60DE, I62V, L63AP, I64IM, A71V	B
	CA4519	CA16206	AY797124	Unknown, IDV, NFV	>104	D30N, L90M	F53FL, N88D	L10V, I15V, K20KR, E34ED, E35ED, M36I, N37D, K45KR, L63P, A71T, I72V, Q92S	B
	SWC-5729	5729-2190		IDV, NFV	81	D30N, M46L	N88D	I13V, L63P, A71T, V77I	B
		5729-3376		IDV, NFV	146	D30N, M46L	N88D	I13V, L63P, A71T, V77I, I93L	B
		5729-4183		IDV, NFV	192	D30N, M46L	N88D	I13V, L63P, A71T, I72IT, V77I, I93L	B
	SWC-8549	8549-2869		IDV, NFV	132	D30N	N88D	L63P, I64LV, V77I, I93L	B
	CA4795	CA14963	AY797160	NFV	79	D30N	N88D	L63P	B
	ASRU010	ASRU010		IDV, NFV		D30N	N88D	L10I, I62V, L63S, I93L	B
	CA4854	CA23745	AY797174	NFV	219	D30N	N88D	L10Y, I13V, N37S, L63P, I64V, V77I	B
	CA5006	CA42713	AY797204	IDV, SQV, NFV, APV, RTV	404	V32VI, I47IV, I54L, L90LM	L10F, L33F, N88D	I13V, I15IV, L19I, Y59YH, I62V, L63P, H69HQ, V77VI	B
	CA5048	CA33747	AY797217	NFV, IDV, LPV	183	D30DN	N88D	L10LI, K20R, E35D, M36I, R41K, K55KR, R57RK, L63P, A71T, V77I, I93IL	B
		CA41248	AY797218	NFV, IDV, LPV	261	M46I, I50V	L10FI, L33LF, N88D	K20R, E35D, M36I, R41K, K55R, R57K, L63P, A71T, V77VI, I93IL	B
	CA5051	CA33587	AY797219	NFV	236	D30N	Q58QE, N88D	I13IV, K20R, E35D, M36X, N37E, I62IV, L63P, A71AV, I72IT, V77I, I93L	B
		CA33669	AY797220	NFV	241	D30N	Q58QE, N88D	I13IV, K20R, E35D, M36X, N37E, I62IV, L63P, A71AV, I72IT, V77I, I93L	B
	CA5106	CA23586	AY797231	NFV, IDV, RTV	233	D30N, I54V, L90M	N88D	T12K, I13V, K20T, E35D, M36I, R41K, I62V, L63H, A71V, V77VI, I93L, C95F	B
	CA5161	CA16265	AY797251	Unknown, NFV, RTV, IDV, APV	>30	D30N	L10F, N88D	L63P, V77I, I93L	B
		CA21338	AY797252	Unknown, NFV, RTV, IDV, APV	>30	D30N	L10F, N88D	L63P, V77I, I93L	B
	CA5173	CA16984	AY797254	NFV, SQV, RTV, IDV, APV	163	D30N, M46L, I54V, L90M	L33IM, N88D	I13V, T26TP, E35D, M36I, N37NI, L38LF, K43KN, R57K, L63P, A71T, I93L	B
		CA24309	AY797255	NFV, SQV, RTV, IDV, APV	214	D30N, M46L, I54V, L90M	L33I, N88D	I13V, E35D, M36I, R57K, L63P, I93L	B
	CA5204	CA33687	AY797264	NFV, SQV, RTV	184	I84V, L90M	L23I, N88D	G16A, K20R, M36I, R57K, Q61H, L63P, H69Q, A71I, I93M	B
	CA5207	CA20551	AY797267	IDV, RTV	266	L90M	N88D	L10I, I15V, Q18H, N37D, K45R, R57K, D60E, I62V, L63P, I66L, A71T, I72M, V77I, I93L	B
	CA5218	CA33900	AY797270	NFV	35	D30N	N88D	I13V, L63P, A71V, V77I	B
	CA5244	CA37730	AY797273	NFV, RTV, IDV	211	M46I, I84V, L90M	L33LI, N88D	L10I, I13V, L63P, A71V, I72IL, V77I, I85V	B
	CA5280	CA23709	AY797289	IDV, NFV, SQV, RTV, APV	255	D30N, I54L, I84V, L90M	L33F, N88D	I15V, R41K, K45R, R57K, L63P, A71V, V82VI, I85V, I93L	B
	CA5410	CA23556	AY797319	IDV, SQV, NFV	270	D30N	N88D	L10I, I13IV, K43R, Q61E, L63P, T74S, V77I, L89LM, I93L	B
	CA5532	CA34022	AY797342	Unknown, NFV	>246	D30N	N88D	L10I, I13V, I15V, M36V, N37S, P39PS, K45R, R57K, L63P, I64V, A71V, I93L	B
	CA5720	CA33608	AY797355	NFV	237	D30N	N88D	K45KR, D60E, L63P, I64V, A71V, V77I, I93L	B
	CA5966	CA41210	AY797371	NFV	279	D30N	N88D	I13V, I15V, E35D, M36I, N37T, K45R, I62V, L63P, I64V, V75I, Q92K	B
	CA5994	CA41300	AY797376	IDV, NFV, SQV, RTV	369	D30N, M46I, L90M	F53L, N88D	K20R, E35D, M36I, N37T, R41K, L63P, I93L	B
	CA6405	CA20498	AY797397	IDV, RTV, NFV	225	D30N	N88D	I13V, I15V, N37T, R57K, L63P	B
	CA6490	CA38442	AY797414	RTV, IDV, NFV	150	D30N	N88D	E34ED, E35EG, M36I, N37D, L63P, I72T, I93L	B
	CA6501	CA24376	AY797416	NFV	199	D30N, L90M	L33F, N88D	I3IV, Q7QH, I13V, I15V, Q18I, L19I, D60E, L63P, V77VI, I93IL	B
		CA38130	AY797417	NFV	298	D30N, L90M	L33F, N88D	I13V, I15V, Q18I, L19I, D60E, L63P, V77I, I93L	B
	CA6570	CA24195	AY797424	IDV, NFV	104	D30N	N88D	I13V, K20KT, L63P, A71AV, V77I	B
	CA6832	CA21417	AY797453	NFV, APV	166	D30N, I54L, L90M	L10F, L33F, N88D	I13IV, K45R, Q61E, L63P, V77I, I93L	B
	CA6865	CA17041	AY797465	NFV	66	D30N	N88D	R8RQ, E35D, N37D, L63P, A71T, V77I, I93L	B
	CA6883	CA17061	AY797480	IDV, NFV	113	D30N	L10LF, N88D	K14R, I15V, E34D, M36I, N37D, R57K, L63C, A71V	B
	CA7106	CA33378	AY797525	NFV	74	D30N, M46I	N88D	I62V, L63P, V77I, I93L	B
		CA41204	AY797526	NFV, RTV	163	D30N, M46I, I54L, L90M	L33F, N88D	L19LI, I62V, L63P, A71T, V77I, V82I, I93L	B
	CA7888	CA20330	AY797563	NFV	127	D30N	N88D	I13V, K20KT, E34ED, R41K, L63LP, I64V, I66IF, A71V, T74TS, V77I	B
		CA20532	AY797564	NFV	138	D30N	N88D	I13V, K20KT, E34ED, R41K, L63LP, I64V, I66IF, A71AV, T74TS, V77I	B
		CA24723	AY797565	NFV	166	D30N	N88D	I13V, E34ED, E35ED, M36X, R41K, L63P, I64V, T74S, V77I	B
	CA7916	CA20371	AY797586	IDV, NFV	236	D30N	N88D	L10V, E35D, M36V, L63P, A71V, I93L	B
		CA33877	AY797587	IDV, NFV	239	D30N	N88D	L10V, E35D, M36V, L63P, A71V, I93L	B
	CA7950	CA20417	AY797608	NFV	185	D30N	N88D	I13IV, E35D, M36I, N37C, I62V, L63P, A71X, I93L	B
		CA33681	AY797609	NFV, RTV, IDV	266	D30N, I54V	L10F, N88D	I13V, E35D, M36I, N37C, I62V, L63P, A71T, I93L	B
		CA37708	AY797610	NFV, RTV, IDV	330	D30N, I54A	L10F, V11VI, L33I, N88D	I13V, K20KR, E35D, M36I, N37C, I62V, L63P, A71T, I93L	B
	CA7962	CA23885	AY797613	IDV, NFV	183	D30N	N88D	L10I, E35ED, M36I, L63P, I64V, I72V	B
	CA8012	CA20491	AY797646	IDV, NFV, SQV, RTV, APV	254	D30N, I54L, L90M	L33F, N88D	L10I, K14R, N37D, K55KR, L63P, A71T, I72T, I93L	B
	CA8015	CA20517	AY797649	NFV	39	D30N, L90LM	N88D	P9PL, I13LV, L24X, E35D, M36I, K45KQ, L63P, I64V, A71AV	B
	CA8022	CA24065	AY797651	SQV	325	I54V, L90M	L23I, N88D	L10I, I13V, M36I, N37D, L63P, A71V, I72V, T74S	B
	CA8028	CA20541	AY797657	NFV	245	D30N	N88D	I13V, E34D, M36V, L63P, A71V	B
		CA33829	AY797658	NFV	326	D30N	N88D	I13V, E34D, M36V, L63P, A71V	B
	CA8049	CA20571	AY797671	IDV, NFV	207	D30N	N88D	E35D, M36I, N37A, I62V, L63P	B
		CA33269	AY797672	IDV, NFV, SQV, RTV	259	D30N, I54V, L90M	N88D	L10LR, I13IV, K20R, E35D, M36I, N37T, I62V, L63P, A71X	B
		CA48095	AY797673	IDV, NFV, SQV, RTV, ATV	284	D30N, I54V, L90M	L33I, N88D	I13V, E35D, M36I, N37T, I62V, L63P, A71T	B
	CA8055	CA20582	AY797678	NFV	121	D30N	L33LF, N88D	T12S, L19V, R57K, L63P, A71T, V77VI, I93L	B
		CA33631	AY797679	NFV, APV	157	D30N, I54L	L33F, N88D	T12S, L19V, K45R, R57K, L63P, A71T, V77I, I85V, I93L	B
	CA8343	CA21262	AY797708	IDV	244	M46I, I84V, L90M	N88D	L10I, I13V, K14R, I15V, Q18H, N37E, I62V, L63P, C67F, A71AT, T74R, V77I, I93L, C95F	B
	CA8356	CA21282	AY797718	NFV	183	D30N	N88D	I15V, K20T, E35D, M36V, L63P, I85V, Q92QR	B
		CA24249	AY797719	NFV	210	D30N	N88D	I15V, K20T, E35D, M36V, L63P, I85V	B
	CA8390	CA42613	AY797733	SQV, IDV, Unknown	>116	D30N	N88D	L10I, I13IV, L19Q, E35D, M36I, L63P, A71T	B
	CA8395	CA21341	AY797735	NFV	173	D30N	N88D	I13V, N37S, R41K, D60E, I62V, L63P, I72IM, V77I, I93L	B
		CA33426	AY797736	NFV, SQV, RTV	224	D30N, I84V, L90M	L33F, F53FL, N88D	I13V, N37S, R41K, D60E, I62V, L63P, A71AT, I72IT, V77I, I93L	B
		CA42657	AY797737	NFV, SQV, RTV	331	D30N, I54L, I84V, L90M	L33F, N88D	I13V, N37PS, R41K, D60E, I62V, L63P, C67W, A71T, I72T, V77I, I93L	B
	CA8425	CA21397	AY797753	NFV	179	D30N	N88D	P1PA, Q2QR, I13V, L63P, A71T, I72T, V77I	B
	CA8440	CA33942	AY797761	IDV, NFV	226	D30N	N88D	I15V, E35D, M36V, R41K, D60E, L63P	B
	CA8444	CA21426	AY797763	NFV	89	D30N	N88D	L63P, I93L	B
	SWC-2909	2909-3897		IDV, NFV	189	D30N, L90LM	L10FV, N88D	I13V, E35D, M36I, L63P, I64V, A71AV	B
	CA9430	CA34050	AY797776	NFV, APV	300	D30N, I50V	L33F, N88D	I13V, E34D, E35D, M36I, K43KQ, L63P, H69Q, A71T, V82VI, L89X	B
		CA34137	AY797777	NFV, APV	305	D30N, I50V	L33F, N88D	I13V, E34D, E35D, M36I, K43KQ, L63P, H69Q, A71T, V82VI, L89X	B
	CA9653	CA23572	AY797784	NFV	136	D30N	N88D	T12N, E35D, M36I, R41K, K45KR, R57K, L63P, A71AT, I72V, I93L	B
		CA37944	AY797785	NFV	236	D30N	L10LF, N88D	T12N, E35D, M36MIV, R41K, K45KR, R57K, L63P, A71AT, I72V, I93L	B
	CA9682	CA23688	AY797801	NFV	198	D30N	N88D	I13V, E35D, M36I, L63A, A71V, V77I	B
	CA9715	CA23789	AY797820	NFV	31	D30N	N88D	L10I, I13V, E35D, M36I, L63P, K70R, A71AT	B
	CA9734	CA23873	AY797830	NFV	108	D30N	L10F, N88D	I15V, N37S, R41K, Q61N, V77I	B
	CA9829	CA24181	AY797875	RTV, IDV, NFV	194	D30N	N88D	K45KR, L63P, V77VI, I93L	B
	CA9849	CA24257	AY797888	IDV, NFV, APV	201	D30N	L33F, N88D	N37NS, L63Q, A71V	B
	CA9935	CA33902	AY797942	NFV	222	D30N	N88D	K14R, I15V, K20T, E35D, M36I, N37S, R41K, L63P, K70KR, V75VI	B
	CA9940	CA24582	AY797944	NFV	179	D30N	N88D	I13V, G49GE, D60E, L63P, A71T, V77I, I93L	B
	SWC-3496	3496-2173		NFV	29	D30DN, I54IL	N88D	W6W*, N37S, R41RK, L63P, I64IL	B
	SWC-5573	5573-2100		Unknown, NFV	>89	D30N, M46I	N88D	L10V, I13V, I15V, L63A, F99X	B
	CA14196	CA34201	AY798003	NFV	191	D30N	N88D	L10I, T12Q, I13V, K14R, E35D, M36I, N37S, R41K, Q61E, I62V, L63P, I64V, C67Y, A71T, I72IT	B
	CA14201	CA33317	AY798007	NFV	89	D30N	N88D	I13V, I15V, L63P, V77I	B
	CA14291	CA33473	AY798031	NFV	265	D30N	N88D	I13V, K20KR, E35D, M36I, L63P, A71AT, V75VI	B
		CA42745	AY798032	NFV	368	D30N	N88D	I13V, E35D, M36I, L63P, A71AT, V75VI	B
	CA14336	CA33539	AY798051	NFV	160	D30N	T74TP, N88D	I13V, K14R, K20KT, N37S, R41K, L63P, A71X, V77I	B
	CA14378	CA33622	AY798060	NFV	220	D30N	N88D	I13IV, I15L, N37ND, R41RK, I62IV, L63P, A71I, V77I, I85V, I93L	B
	CA14420	CA33690	AY798078	NFV	110	D30N	N88D	I13V, N37NS, I62IV, L63A, A71AV, V77I	B
	CA14481	CA33778	AY798089	NFV	76	D30N	N88D	L10V, I13V, E34D, M36I, L63P, A71V, I93L	B
	CA14587	CA33969	AY798126	NFV	103	D30N	N88D	I13V, E35D, M36I, R41K, L63P, I64V	B
	CA14671	CA34096	AY798143	NFV	122	D30N	N88D	I13IV, I15V, E35D, M36I, N37NS, L63P, A71V, V75VI, V77VI, I93L	B
	CA14683	CA34118	AY798146	NFV	51	D30N, M46ML	N88D	E34ED, N37S, I62V, L63P, T74TS, V77I, I93L	B
	CA16089	CA38298	AY798163	IDV, NFV	331	D30N	N88D	I13V, K20R, E35D, M36L, N37S, R41K, D60E, I62V, L63P, I64V, V75VI	B
	CA16168	CA38474	AY798183	PI	NA	D30DN, I54V, I84V, L90M	N88D	L10Y, I15V, K20R, E35D, M36I, N37NT, K45R, L63P, I64V, A71AT, Q92K, I93L	B
	CA16265	CA38680	AY798209	NFV	230	D30N	N88D	E35D, M36V, N37T, L63P, A71V, I72V, V77I, I93L	B
	CA16276	CA38704	AY798212	NFV, SQV, RTV, APV	277	D30N, I84V, L90M	L10F, L33F, N88D	I13V, I15IV, K45R, L63P, V77VI, P79PH, I93L	B
	CA16365	CA38884	AY798235	NFV	75	D30N, M46MI	N88D	I15V, L19I, N37E, L63LP, V77I, I93L	B
Weber (2005)	M86943	M86943	AY677464	NFV	50	D30N, M46I	N88D	T12S, K14R, L63P, I64V, I93L	B
Baxter (2006)	12-2031	2031-30728	DQ875971	PI	NA	D30N, M46I, I54V, L90M	N88D	I13V, E35D, M36I, N37E, I62V, L63P, A71T	B
	12-2168	2168-30804	DQ875987	PI	NA	D30N, L90LM	N88D	R41K, K45R, L63P, V77VI, I93L	B
	12-1421	1421-30331	DQ876015	PI	NA	D30N, M46L, I54L, L90M	V32V_W, N88D	L10R, I15V, L19Q, K20T, R41K, K55KR, L63P, K70R, A71V, V77I	B
	12-2050	2050-30625	DQ876025	PI	NA	V32I, M46I, I47V, L90M	N88D	L10I, I15V, L19V, E35D, M36I, N37S, L63P, I85V, Q92K	B
	12-1618	1618-30821	DQ876090	PI	NA	M46I, I54V, I84V	L10F, L33LI, Q58E, N88D, L89V	I13V, A22V, M36I, R41K, R57RK, L63P, A71T, T74K, N83S, T91A	B
	12-4073	4073-30305	DQ876124	PI	NA	M46I, I47IV, I54V, I84V, L90M	L10F, V11I, L33LI, N88D	T12S, I15V, L19Q, K20I, E35D, M36I, N37D, Q61QH, L63P, A71T, I85V, T91TCS, Q92R	B
	12-4047	4047-30618	DQ876152	PI	NA	D30N, M46I, I54V, V82A	L24I, L33F, K43T, N88D	L10I, I15V, E34V, E35D, M36L, I62V, L63P, A71T, I72T, V75I	B
		4047-30910	DQ876153	PI, RTV, TPV	>12	D30N, M46I, I54V, V82A	L24I, L33F, K43T, N88D	L10I, I15V, E34V, E35D, M36L, I62V, L63P, A71T, I72T, V75I	B
	12-1304	1304-30717	DQ876212	PI	NA	D30N, M46ML, I54L, L90M	L10F, L33F, Q58E, N88D	I13IV, G16GA, E35ED, N37S, I62V, L63P, I72IM, V77VI, I93L	B
	12-1307	1307-30331	DQ876222	PI	NA	D30N, M46I, I54A, I84V, L90M	L10F, L33F, Q58E, N88D, L89V	I13V, L19LI, V56A, L63P, I66F, A71V, V77I	B
	12-2092	2092-30724	DQ876412	PI	NA	D30N, I54V, V82C, I84V, L90M	L10F, L33F, N88D	T12S, I13V, K45R, Q61QH, I62V, L63P, I66V, A71T, I72T, P79X, Q92R, I93L, C95F	B
	12-1338	1338-30414	DQ876442	PI	NA	D30N	N88D	L10I, I13V, E35D, M36I, N37S, R41K, L63P, C67E, A71T	B
	12-1969	1969-30626	DQ876454	PI	NA	D30N, V32I, M46I, I47V, I54L, I84V, L90M	L10F, L33F, F53L, N88D	I13V, E34Q, I62V, L63C, T74E, V77I, P79A, L89M	B
	12-2167	2167-30702	DQ876486	PI	NA	D30N, I50L	L10LF, V11VI, L33I, N88D	I13V, E35D, M36I, K45KI, R57K, L63P, A71T	B
	12-1694	1694-30428	DQ876526	PI	NA	D30N, I50V, L90M	L10F, L33F, N88D	I13V, E35D, M36I, N37A, K45R, L63P, H69Q	B
	12-1701	1701-30507	DQ876530	PI	NA	I54V, L90M	N88D	L10I, I15V, K20R, E35D, M36I, N37NS, R41K, D60E, I62V, L63P, A71T, I72T, I85V	B
	12-1373	1373-30617	DQ876547	PI	NA	D30N	N88D	K20R, E35D, M36I, N37T, D60E, L63P, V77I	B
	12-1374	1374-30623	DQ876548	PI	NA	M46I, I54V, I84V, L90M	L33F, N88D	L10I, K20R, E35D, M36I, R41E, K55R, I62V, L63P, I64L, I66IV, H69R, A71T, I72E, Q92K, C95F	B
	12-2249	2249-30729	DQ876561	PI	NA	D30N	L10F, N88D	R41K, I62V, L63P, V77I, I93L	B
	12-2250	2250-30729	DQ876562	PI	NA	M46I, L90M	N88D	I15V, N37E, P39S, I62V, L63P, A71V, I72M	B
	12-1142	1142-30401	DQ876601	PI	NA	D30N, L90LM	N88D	I13V, I62IMV, L63PS, A71AITV, V77I	B
	12-1481	1481-30812	DQ876616	PI	NA	D30N, I54V, L90M	L10F, N88D	E35D, M36I, N37S, R41K, I62V, L63P, A71T, I72M, I93L	B
	12-2234	2234-30722	DQ876622	PI	NA	M46L, I54V, V82T, L90M	L10FI, N88D	I15V, K20R, E35D, M36I, N37D, I62V, L63P, A71V, F99Y	B
		2234-31205	DQ879125	PI, RTV, TPV	>19	M46L, I54V, V82T, L90M	N88D	L10I, I15V, K20R, E35D, M36I, N37D, I62V, L63P, A71V, F99Y	B
	12-2384	2384-30815	DQ876642	PI	NA	M46I, I84V	L10F, N83D, N88D	I13V, G16A, A22V, E34Q, N37ND, R57K, L63P, A71V, T91A	B
	12-1216	1216-30822	DQ876653	PI	NA	D30N, I54V, L90M	L10F, L33I, N88D	T12S, I13V, K20T, M36I, L63P, I64V, A71T, I72IT, V75VI, I93L	B
	12-2015	2015-30701	DQ876693	PI	NA	D30N	L10F, V32A, L33F, K43T, N88D	I13V, I15V, K20T, E35D, M36I, N37S, K45R, R57K, L63P, I64V, V77VI, L89LM	B
	12-3119	3119-30417	DQ876725	PI	NA	M46L, I54V, V82A, L90M	F53FL, N88D	L10I, I13M, I15V, K20IM, M36I, R41K, K45R, I62V, L63P, A71T, T74TK, I85V	B
		3119-30710	DQ879133	PI, RTV, TPV	>12	M46L, I54V, V82A, L90M	L33I, N88D	L10I, I15V, L19LV, K20IM, E35EG, M36I, R41K, K45KR, I62V, L63P, A71T, I72IM, I85V	B
		3119-40623	DQ879132	PI, RTV, TPV	>62	M46L, I54V, V82T, L90M	V11I, L33I, N88D	I15V, K20V, E35G, M36I, R41K, I62V, L63P, I66L, A71T, I72M, I85V, F99Y	B
	12-1913	1913-30515	DQ876762	PI	NA	D30N, I54LV, V82A, L90M	L10F, L33F, N88D	I15V, K20V, E35N, M36I, R41K, I62V, L63P, K70N, A71V, I72V	B
	12-1014	1014-30324	DQ876764	PI	NA	D30N, L90M	N88D	I13V, K20KR, E35D, M36I, N37S, R57K, I62V, L63P, A71T	B
	12-1415	1415-30512	DQ876798	PI	NA	D30N, M46I, I54V, L90M	L10F, L33LI, Q58E, L76S, N88D	I13V, E34D, M36I, I62IV, L63P, A71T, I72V, I93L	B
	12-2078	2078-30612	DQ876818	PI	NA	D30N	N88D	I13V, K14R, L19I, K20T, R41K, K45KR, I64V, A71V, V77I	B
	12-1138	1138-30528	DQ876830	PI	NA	D30N, I54L, L90M	K43T, G73GS, T74TP, N88D	L10LR, R57K, L63P, C67CW, A71AV, V77I, I93L	B
	12-1794	1794-30714	DQ876860	PI	NA	M46I, I54V, V82T, L90M	L10F, K43T, N88D	I13M, L19I, K20R, E35D, M36I, K55R, R57RK, I62V, L63P, I66V, H69Q, A71V, Q92K, I93L, C95F, T96S	B
	12-1288	1288-30408	DQ876868	PI	NA	D30N, M46ML	L33LI, N88D	I13V, A22V, R57K, I62IV, L63P, A71V	B
	12-1472	1472-30424	DQ876875	PI	NA	V32I, M46I, I47V, I84V, L90M	L10F, L33IM, N88D	I13V, E35D, M36I, K55R, R57K, I62V, L63P, I66V, A71V, I72L, V77T, I93L, C95F, F99Y	B
	12-1494	1494-30515	DQ876890	PI	NA	D30N	L10LF, N88D	I13IV, E35D, M36I, I62V, L63A, I64IV, A71AT	B
	12-1170	1170-30305	DQ876942	PI	NA	I54V, V82A, L90M	L23I, K43T, F53L, N88D	L10I, K20R, E35D, M36I, R57K, I62V, L63P, A71V	B
	12-1201	1201-30307	DQ876981	PI	NA	D30N, I54V, V82A, L90M	L10F, L33F, Q58E, N88D	I13V, K20R, E35D, M36I, N37S, R41K, L63P, A71T	B
	12-2067	2067-30714	DQ877038	PI	NA	D30N	N88D	I13V, K14R, K20I, E35D, M36I, N37DE, L63P, A71V	B
	12-2389	2389-30818	DQ877039	PI	NA	D30N, M46L, I54V, V82A	L10F, L33F, N88D	I13V, K20T, I62V, L63P, A71V, V77I	B
	12-1573	1573-30324	DQ877071	PI	NA	M46I, I50V, I54V, V82A	N88D	L10I, I15V, K20R, E35D, M36I, L63P, A71V	B
	12-1768	1768-30522	DQ877075	PI	NA	D30N, I54L, V82C, L90M	L10F, L33F, K43T, N88D	I13V, I15V, K20T, E35D, M36I, N37D, R41RK, R57K, I62V, L63P, K70KN, A71V, I85IV, L89LM, Q92QK, T96S	B
	12-1654	1654-30407	DQ877089	PI	NA	G48M, I54V, V82A, L90M	F53L, N88D	L10IV, L19I, K20R, E35D, M36I, N37D, R41K, K55KR, R57K, D60E, I62V, L63S, A71V, I93L, C95F	B
	12-1603	1603-30724	DQ877132	PI	NA	D30N	L10F, N88D	K14N, I15V, K20T, M36I, I62V, L63P, I85V	B
	12-3060	3060-30415	DQ877165	PI	NA	M46I, I84V, L90M	L10F, L33F, N83D, N88D	T4S, I13V, G16A, L19I, L24L*, E35N, M36I, P39S, I62V, L63P, A71V, I72V	B
	48-1056	1056-30708	DQ877280	PI	NA	M46I, I54V, I84V, L90M	L10F, N88D	I13V, I15V, Q18H, K20KM, N37D, K45R, L63P, I66IV, A71T, I72L, I93L, C95F	B
	48-1114	1114-30707	DQ877379	PI	NA	M46I, I47V, I54V, L90M	N88D	K14R, I15V, K20T, E35D, M36I, N37D, R41K, R57K, Q61N, L63P, A71V, I72T, V77VI, V82I, I93L	B
	48-1029	1029-30623	DQ877386	PI	NA	D30N, M46ML, I84IV, L90LM	G73GA, N88D	I62V, L63P, K70KR, I72V, V77I, I93L	B
	48-1801	1801-30923	DQ877440	PI	NA	D30N	N88D	R41K, L63P, V75VI, V77VI, I93L	B
	48-1862	1862-30925	DQ877456	PI	NA	D30N, I54IV	N88D	T12S, I13IV, L19I, K20KT, E35ED, N37NS, R41RK, L63P, I66IF, K70R, A71V, T74TS, V77I	B
	48-1201	1201-30623	DQ877745	PI	NA	M46L, I54V, V82A, L90M	L10F, L33I, K43T, N88D	T4P, K20R, E35D, M36I, N37D, I62V, L63P, C67L, A71V, I72L	B
	48-2213	2213-30923	DQ877866	PI	NA	D30N	N88D	I13V, L63P, A71T, V77I	B
	48-3122	3122-30526	DQ878030	PI	NA	M46I, I54V, V82A, L90LM	L10F, L33I, K43T, N88D, L89V	I13V, E35D, M36I, R41K, K55R, R57RK, D60E, I62V, L63P, A71T	B
	48-3140	3140-30414	DQ878051	PI	NA	D30N, I54L, L90M	L33I, N88D	L10I, K20R, E35N, M36I, I62V, L63P, A71T, I85V, I93L	B
	48-3171	3171-30409	DQ878080	PI	NA	V32I, M46I, I47V, I54L, I84V, L90M	L10F, L33F, N88D	I13V, I62V, L63P, I64L, K70KQ, A71I, I72IV, P79A, L89S	B
	48-3198	3198-30507	DQ878108	PI	NA	I84V, L90M	N88D	L10I, I13V, E35D, M36I, L63P, A71V, T74K	B
	48-3222	3222-30605	DQ878129	PI	NA	D30N	N88D	I13V, N37H, R41K, I62V, L63P, A71T, V77I, I93L	B
	48-3259	3259-30813	DQ878163	PI	NA	D30N, M46L, V82A, L90M	L10F, L33F, N88D	I3V, I13V, K20R, E35D, M36I, N37D, I62V, L63P, I72IM	B
	48-3269	3269-30701	DQ878174	PI	NA	D30N	N88D	N37C, K45R, R57K, L63P, V77I, I85V	B
	48-3334	3334-30930	DQ878228	PI	NA	M46I, I54V, V82A, L90M	V11VI, F53FL, N88D	L10I, I15V, Q18I, K20R, E35D, M36I, K55R, I62V, L63P, A71IV, I85V, T91S	B
	48-4064	4064-30617	DQ878295	PI	NA	D30N, M46I, I54V, I84V, L90M	L10F, L33F, N88D	T4TA, L63P, A71V, I72IM, I93L	B
	48-4072	4072-30218	DQ878301	PI	NA	D30N, M46I, I54L, V82F, L90M	L33I, Q58E, N88D	L10IV, I13A, K20R, A22V, E35D, M36I, N37E, R57K, D60N, Q61E, L63P, I64V, A71V, I72M, V75I, I93L	B
	48-4212	4212-30619	DQ878445	PI	NA	M46L, I54V, I84V, L90M	L10F, N88D	T4A, I15V, K20R, E35D, M36I, N37S, K43I, D60E, L63P, A71V, I85V, T91S, Q92K	B
	48-4219	4219-30423	DQ878453	PI	NA	D30DN, M46MI, I54V, V82VAIT, L90LM	L10FI, L33LF, F53FL, N88D	T12TP, I13V, I15IV, G16E, K20KT, E35EG, M36X, R41RK, K45T, I62V, L63S, I64IV, C67CY, A71AV, I72IV, V77VI, I93IL	B
	48-4241	4241-31126	DQ878474	PI, RTV, TPV	>26	M46I, I47V, I54A	N88D, L89V	L10I, I13V, Q18H, K20M, N37D, K55R, L63P, A71I, I72V, V77I, Q92K	B
		4241-40707	DQ878473	PI, RTV, TPV	>59	M46I, I47V, I54A	N88D, L89V	L10I, I13V, Q18H, K20M, L33V, N37D, K55R, L63P, I66V, A71I, I72V, V77VI, Q92K	B
	48-6036	6036-30428	DQ878635	PI	NA	M46I, I54V, V82A, L90M	L33I, N88D	L10V, I13V, G16A, K20R, E35D, M36I, R57K, L63P, A71T	B
	48-6052	6052-30530	DQ878651	PI	NA	G48GV, I54IV, V82VA, L90M	L33LF, K43T, N88D	L10I, I15V, L19I, K20R, E34Q, E35D, M36I, N37D, R57K, Q61QH, I62V, L63P, I66IF, A71V, I72IT, I85IV	B
	48-6090	6090-30619	DQ878685	PI	NA	M46L, I84V, L90M	L10F, N88D	I15V, K20I, E34EQ, M36I, R41K, I62V, L63P, A71V, I85V	B
	48-6118	6118-30923	DQ878704	PI	NA	M46I, I50V, I54V, V82A, L90M	L23I, L33F, K43KT, N88D	L10I, I13V, E34Q, M36MI, I62V, L63P, A71V, I72M, C95F	B
	48-6124	6124-30909	DQ878710	PI	NA	D30N	N88D	K14R, K20T, E35D, M36I, I62V, L63P, A71V	B
	48-6160	6160-30710	DQ878736	PI	NA	M46I, I84V	L10F, N88D	I15V, G16E, K20M, N37S, Q61H, L63S, H69K, V77I, P79A	B
	48-6240	6240-30729	DQ878802	PI	NA	D30N	N88D	I62V, L63P, H69N, A71AV, V77I, I93L	B
	48-6241	6241-30729	DQ878803	PI	NA	D30N	K43T, N88D	E35D, M36I, R57K, L63P, A71V, V77I, I93L	B
	48-6248	6248-30929	DQ878807	PI	NA	D30N	N88D	L10LI, L19Q, K20R, E35D, M36I, N37T, I62V, L63P, A71AT, I93L	B
	48-6250	6250-30730	DQ878809	PI	NA	I54V, V82A, L90M	L10F, L33F, N88D	I13V, M36I, N37D, K45R, R57K, I62V, L63P, C67F, A71V	B
	48-6308	6308-30924	DQ878847	PI	NA	M46I, I54V, V82A, L90M	Q58E, N88D	L10I, I15V, G16A, K20R, E35D, M36I, N37ND, R57K, I62V, L63P, A71V, T91S	B
	48-6358	6358-30926	DQ878874	PI	NA	I54A, I84V, L90M	L10F, L33F, N88D, L89V	T4TS, I13V, K14R, I15V, K20R, E34V, E35D, M36I, N37E, I62V, L63P, I66F, A71V, Q92R	B
	48-7051	7051-30505	DQ878922	PI	NA	D30N	N88D	E35D, M36V, N37D, I62V, L63P, I64L, I72V, I93L	B
	48-7052	7052-30506	DQ878923	PI	NA	D30N, M46I	Q58QE, N88D	I15V, K20I, E35D, M36I, N37ND, I62V, L63P, T74S, V75VI	B
	48-7083	7083-30926	DQ878938	PI	NA	M46I, I54V, V82A, L90M	L10F, N88D	I13M, I15V, K20I, M36I, R41K, K45R, I62V, L63P, C67F, A71T, I72L, I93L	B
	48-7141	7141-30731	DQ878979	PI	NA	D30N, V82A	L10F, L33I, N88D	I13V, K20T, M36I, L63P, I64V, V75I	B
	48-7151	7151-30825	DQ878989	PI	NA	D30N, L90M	F53L, N88D	I15IV, L19V, L63P, C67W, I93L, C95GV	B
	48-9176	9176-30911	DQ877293	PI	NA	D30N, M46L, I54V, V82A	L24I, L33LI, N88D	I13IV, K20R, E35D, M36I, R41K, I62V, L63P, A71V, I72IT, V77VI	B
	48-9317	9317-30923	DQ877303	PI	NA	D30N, I54V, I84V, L90M	L10F, N88D	I13V, K45KR, L63P, I66IV, H69Q, A71V	B
	48-9376	9376-30929	DQ877306	PI	NA	D30N	M46MV, N88D	I13IV, G16E, P39S, G49GR, L63P, A71V, V77VI	B
	48-9365	9365-30929	DQ877489	PI	NA	I54V, I84V, L90M	L10F, L33F, K43T, N88D	I13V, I15V, K20R, E35D, M36I, N37E, D60E, I62V, L63P, I66F, H69R, A71T, I72V	B
	48-9238	9238-30915	DQ877543	PI	NA	M46I, I54V, I84V, L90M	L10F, N88D	W6A, I13V, K20R, L33M, E35D, M36I, K55R, I62V, L63P, A71T, I72E, Q92R, I93L, C95F	B
	48-9307	9307-30918	DQ877566	PI	NA	D30N	N88D	L10V, I13IV, I15V, K20T, E35D, M36I, R41K, Q61DN, L63S, E65D, A71AV, I72IT	B
	48-9303	9303-30922	DQ877588	PI	NA	D30N, M46I, I50V	L10F, N88D	K20I, E35G, M36I, Q61E, L63P	B
	48-9279	9279-30925	DQ877619	PI	NA	M46I, I54V, I84V, L90M	L10F, Q58E, N88D	I15V, G16A, L19P, K20I, A22V, E35D, M36I, N37Q, D60E, I62V, L63P, C67F, H69Q, K70E, A71V, I72T, I85V, T91S	B
	48-9234	9234-30916	DQ877642	PI	NA	D30N	L33F, F53FL, N88D	I15V, K20KR, E35D, M36V, N37D, R57K, D60E, I62V, L63P, A71T	B
	48-9315	9315-30922	DQ877645	PI	NA	D30N, I54L, I84V, L90M	L10F, L33F, N88D	I13V, E34Q, K55KR, L63AD, A71T, V77I	B
	48-9166	9166-30925	DQ877678	PI	NA	D30N, L90LM	L10F, L33I, N88D	E35D, M36I, R41K, I62IMV, L63P, L89F, I93L	B
	48-9108	9108-30915	DQ877694	PI	NA	D30N	N88D	R8Q, I13V, L19I, L38LF, L63A, H69Y, A71V, V77I	B
	48-9146	9146-30825	DQ877712	PI	NA	L90M	L33I, N88D	I15V, E35D, M36I, N37S, R41K, I62V, L63P, A71T, I85V	B
	48-9147	9147-30825	DQ877713	PI	NA	D30N, M46L, L90M	L10F, L33I, N88D	I13V, K14R, I15V, Q18QK, L19V, K20T, M36I, R41K, I62V, L63P, I64IV, K70E, A71AV, I93L	B
	48-9130	9130-30918	DQ877731	PI	NA	D30DN, M46I, V82A	N88D	I15V, K20M, E35DG, M36I, N37E, R41K, K43KR, K55R, R57K, Q61N, L63P, I93L	B
	48-8096	8096-30901	DQ879093	PI	NA	D30N, I54L	L10F, L33F, N88D	I13V, K45R, D60E, Q61E, I62V, L63P, V77I, I93L	B
Lama (2006)	Pt4539	4539		PI	NA	D30N	N88D	R41K, K45KR, Q61E, L63P, I64L, A71AT, I72IT, V82VI, I93L	B
Mitsuya (2006)	CA4128	CA33490	DQ780906	IDV, NFV, SQV, RTV	266	D30N, I54IL, I84V, L90LM	L10F, N88D	I13V, K20T, L33V, I64V, A71V	B
	CA6031	CA55107	DQ780918	NFV, SQV, RTV, APV, FPV	383	D30N, I54L, I84V, L90M	L10F, L33F, N88D	I13V, K45R, L63P, I93L	B
	CA7073	CA17532	DQ780900	NFV	148	D30N, L90LM	L10LF, N88D	I13IV, L63P, A71AV, V77I, I93L	B
	CA7106	CA57607	DQ780920	NFV, RTV	246	D30N, M46I, I54L, L90M	L33F, K43KT, N88D	L19LI, I62V, L63P, I66L, A71T, I72IT, V77I, V82I, I93L	B
	CA8049	CA59208	DQ780923	IDV, NFV, SQV, RTV, ATV	354	D30N, I54V, L90M	L33I, N88D	I13V, E35D, M36I, N37T, I62V, L63P, A71T, T74S	B
	CA16485	CA42779	DQ780913	Unknown, APV, LPV, RTV, ATV	>73	D30N, I54V, I84V, L90M	L10F, L33F, N88D	I13V, I15V, E35D, M36I, N37E, I62V, L63P, L89F, I93L	B
	CA21019	CA48347	DQ780914	NFV, SQV, RTV	315	D30N, I84V, L90M	L33F, N88D	I13V, I15V, L63P, A71T	B
	CA22062	CA51032	DQ780917	IDV, NFV	385	D30N, M46I, L90LM	L10F, N88D	T12I, I13V, I15V, R57K, I62V, L63P, V77I, I93L	B
Rhee (2006)	CA14258	CA50942		Unknown, NFV	>122	D30N	N88D	I13V, L63P, A71AT, V77I	B
Sanabani (2006)	02BR011	02BR011	DQ358809	PI	NA	D30N	N88D	L10V, I15V, R41K, K45R, R57K, L63P, I64L, K70R, V77I	B
Eyer-Silva (2007)	BRSQ14	05BRSQ14	DQ899722	NFV	209	D30N	L33F, N88D	I15V, G17D, E35D, M36V, D60E, I62V, L63P, A71T, I72T	B
Rios (2007)	CH50	MR_CH50	EF193942	Unknown, NFV	NA	D30N	N88D	L10V, K45R, L63P, V77I, I93L	B
		MR_CH50.1	EF193943	Unknown, NFV	NA	D30N	N88D	L10V, T12L, K45R, L63P, V77I, I93L	B
	CH65	MR_CH65	EF193959	Unknown, NFV	NA	D30N	N88D	I15V, Q18H, L19I, N37E, D60E, L63P, V77VI, I93L	B
von Wyl (2007)	92	1514929	EF449872	PI	NA	D30N	N88D	I13IV, D60E, L63P, I64V, V77I, I93L	B
	142	5889863	EF449975	PI	NA	D30N	N88D	L19I, L63P, I72V, V77I, I93L	B
	158	5866879	EF449784	PI	NA	D30N	N88D	R41K, K45R, R57K, L63P, V77I, I93L	B
	145	5235050	EF449944	PI	NA	D30N	N88D	N37D, D60E, L63H, V77VI	B
Rosen-Zvi (2008)	5	99p5-1		NFV	117	D30N	N88D	E35D, M36MIV, N37D, R41K, L63P, I64V	B
		02p5-2		NFV	268	D30N	N88D	K20KR, E35D, M36MIV, N37D, R41K, L63P, I64V, V77VI	B
		03p5-3		NFV	331	D30N	N88D	K20R, E35D, M36I, N37D, R41K, I62V, I64V, V77I	B
	69	01p69-1		IDV, RTV, NFV	254	D30N	N88D	I13V, N37D, K43R, L63P, V75I	B
	72	01p72-1		NFV	208	D30N	N88D	L10V, I13V, K14R, K20KR, E35ED, M36MI, L63P, A71T, V77I, I93IL	B
Cardoso (2009)	3006	BRGO3006	FJ618910	PI	NA	D30N, I54L	L10F, L33I, N88D	T12S, K14R, L19V, K20T, E35N, M36I, N37S, R41K, L63P, A71T, I85V, I93L	B
De Meyer (2009)	DRV15	DRV15BL		PI	NA	D30N, M46I	N88D	I64V, V77I	B
		DRV15-48w		PI, DRV, RTV	>48	D30N, M46I	N88D	I64V, V77I	B
	LPV30	LPV30BL		PI	NA	D30N, M46IL, L90M	Q58E, N88D	L10IV, L63P, V77I, I93L	B
		LPV30-48w		PI, LPV	>48	D30N, M46IL, L90M	Q58E, N88D	L10IV, L63P, V77I, I93L	B
Dumans (2009)	RG105	RG105	DQ659486	SQV, NFV, Unknown	>205	D30N, L90M	L33F, N88D	I15V, M36L, L63P, T74S, I93L	B
Rhee (2009)	CA5204	CA50796	FJ983179	NFV, SQV, RTV, LPV	304	I84V, L90M	L10LF, L23I, N88D	I13IV, G16A, K20R, M36I, R57K, Q61H, L63P, H69Q, A71I, I93M	B
	CA5752	CA57615	FJ983188	IDV, NFV, RTV, APV, LPV, ATV	464	D30DN	N88D	L10LI, I13IV, E35D, M36I, N37D, L63P, A71AT, I93L	B
	CA7883	CA20320	FJ983237	NFV	155	D30N	N88D	T12TS, I13V, K14KR, I15V, E35D, M36V, N37D, R57K, L63P, A71IT, I93IL	B
	CA7991	CA20463	FJ983253	NFV	168	D30N, M46MI	N88D	N37NH, R41K, L63P, V77I	B
		CA34127	FJ983255	NFV, RTV, IDV	268	D30DN, M46I, V82A	L24I, N88D	L10IV, I13IV, K20KT, R41K, K45KR, K55KR, L63P, A71V, I72IL, V77I, Q92QK	B
	CA8407	CA21364	FJ983285	NFV	166	D30N	N88D	I13V, N37Q, L63P, A71V, V77I, I93L	B
	CA8413	CA21396	FJ983287	SQV, RTV	166	M46MI, I84V, L90M	L33F, F53FL, N88D	I13V, I15V, K20KR, M36L, N37T, I62V, L63P, I66X, A71T, I72V, T74K	B
	CA9707	CA23763	FJ983317	IDV, NFV	278	D30N	N88D	L10LV, N37S, R41K, L63P, V77I, I93L	B
	CA9985	CA24775	FJ983341	NFV	22	D30N	N88D	G16GV, E35D, M36I, I62V, L63P, A71X	B
	CA14264	CA33428	FJ983353	NFV	184	D30N, L90M	L10FI, N88D	Q7E, I13V, R41K, K45R, L63P, V77I, I93L	B
	CA14481	CA55141	FJ983381	NFV	78	D30N	N88D	L10V, I13V, E35D, M36I, R41K, I62IV, L63P, K70KR, A71V, I93L	B
	CA16508	CA50974	FJ983427	NFV	345	D30N	N88D	I13V, E35ED, N37S, D60E, L63P, A71T, V77I	B
	CA22061	CA51030	FJ983488	NFV	42	D30N, L90M	N88D	I13V, E35D, M36I, I62V, L63P, I64V	B
	CA23878	CA55383	FJ983516	NFV	378	D30N	N88D	T12E, L19T, K20R, E35D, M36I, L63P, V77VI, I93L	B
	CA37947	CA84537	FJ983566	NFV	503	D30N	L33F, N88D	N37S, R57K, I62V, L63H, A71IV, V77I, I85IV	B
Dau (2010)	05497A	05497A	GU581660	PI	NA	D30N	N88D	Q18M, R41K, L63P, V77I, I93L	B
	05575B	05575B	GU581673	PI	NA	D30N, I54V, L90M	N88D	E35D, M36I, I62V, L63P, A71V, I93IM	B
	06069A	06069A	GU581700	PI	NA	I54V, I84V, L90M	N88D	I15V, L19I, K20R, E35D, M36I, N37D, R41K, D60E, Q61N, L63P, I66F, A71V	B
	06165A	06165A	GU581712	PI	NA	D30N, M46L, I54L, L90M	L33F, Q58E, N88D	I13V, K20R, E34D, E35D, M36I, R41K, L63P, I93L	B
	06941A	06941A	GU581804	PI	NA	D30N	N88D	L19I, L63Q, C67E, A71T, I72V, V77VI	B
	07821A	07821A	GU581870	PI	NA	D30N	N88D	L63P, I64L, A71T, V77I	B
	08062A	08062A	GU581894	PI	NA	D30N	N88D	L10I, I13V, L63AV, H69HY, A71IT, V77I, I93L	B
	08311A	08311A	GU581904	PI	NA	D30N	N88D	I13V, E35D, M36I, R41K, K45R, L63P	B
	08401A	08401A	GU581910	PI	NA	D30N, M46I	L33I, N88D	T12P, I13V, M36I, N37ND, P39Q, K55R, R57K, L63P, I64V, H69Y, A71T, I72T	B
	08699A	08699A	GU581935	PI	NA	D30N, M46MI, I54V, L90M	L10F, L33I, N88D	T12S, I13V, K20T, M36I, L63P, I64V, A71AT, I72IT, V75VI, I93L	B
	08709A	08709A	GU581938	PI	NA	D30N	N88D	I13IV, L19V, N37H, K45R, L63P, H69Q, A71AT, V77I	B
	08767A	08767A	GU581945	PI	NA	D30N	N88D	L10V, T12E, L19I, K45R, L63P, V77I, Q92E, I93L	B
	09215A	09215A	GU581959	PI	NA	D30N	L10F, N88D	I13V, K20KT, R41RK, A71V, V77I	B
	09472A	09472A	GU581970	PI	NA	M46I, I54V, V82A	N88D	L10I, T12TS, L19T, L63P, H69Q, A71V	B
	10075A	10075A	GU581993	PI	NA	D30N, I54V, L90M	L33I, N88D	L10V, I13V, K20R, E35D, M36I, L63P, A71T, T74S	B
	10309A	10309A	GU581998	PI	NA	D30N	N88D	E35D, M36MIV, N37DE, D60E, L63P, A71AV, I93L	B
	10334A	10334A	GU581999	PI	NA	D30N	N88D	L10I, K20R, E35D, M36V, Q61E, I62V, L63P, T74S, V77I, I93L	B
	11487A	11487A	GU582046	PI	NA	D30DN, M46MI, I50IV, I54IV, V82AT	L10LF, L33LF, N88D	I13V, K20R, E35D, M36I, I62V, L63P, A71AV	B
	11817A	11817A	GU582053	PI	NA	D30N, I54V, L90M	N88D	L10Y, I13V, R57K, I62V, L63P, C67F, A71T, I72T, V77I, I93L	B
Hamkar (2010)	13	Ir-HIV-DR-13	GU724816	PI	NA	D30N	N88D	T12N, I13R, K14D, K20T, L63P, V77I	B
	16	Ir-HIV-DR-16	GU724819	PI	NA	D30N	N88D	T12N, I13R, K14D, K20T, L63P, V77I	B
Rangel (2010)	HIV247p	HIV247p	GU807506	PI	NA	D30N	N88D	L10I, I13V, K20R, E35D, M36I, R57K, I62V, L63C, I64MV, I66F, A71V, I72V	B
Rhee (2010)	CA1329	CA55163	DQ780919	IDV, NFV, SQV, RTV, Unknown	>139	D30N, I84V, L90M	L10F, L33F, K43T, N88D	I15V, E35D, M36L, N37E, D60E, I62V, L63P, I93L	B
	CA4159	CA87351		IDV, NFV, SQV, RTV, APV, LPV, FPV	522	D30N, I54IV, L90M	V11VI, F53FL, Q58QE, N83ND, N88D	T12TA, I13IV, L19I, K20I, E35N, M36I, N37DE, D60E, Q61E, L63P, A71V, I72T	B
	CA5048	CA87349		NFV, IDV, LPV, RTV, ATV	415	D30N	N88D	K20R, E35D, M36I, R41K, D60DE, L63P, A71AT, V77I, I93IL	B
	CA6031	CA79361	GQ212773	NFV, SQV, RTV, APV, FPV	497	D30N, I54L, I84V, L90M	L10F, L33F, N88D	I13V, K45R, L63P, I66IV, P79PS, L89LF, I93L, C95CF	B
	CA7916	CA55061	GQ210297	IDV, NFV	239	D30N	N88D	L10V, E35D, M36V, L63P, A71V, I93L	B
	CA26353	CA79455	GQ212829	NFV, FPV	282	D30N, I54L, L90M	L10F, L33F, N88D	I13V, K14R, I15V, K20T, E35D, M36I, R41I, K43RS, R57K, I62V, L63P, I66V, A71V, I72T, V77I, Q92K, I93L, C95F, T96S	B
Aulicino (2011)	ARN27MSA	ARN27MSA	FJ525849	PI, Unknown	NA	D30N, L90M	N88D	L10I, K14R, L19I, E34EG, K45R, I62V, L63P, I72E, V77I, I93L	B
	4080-L631	4080-L631	HQ158271	PI, Unknown	NA	D30N	N88D	I15V, G17D, K20T, E35D, M36I, R57K, Q61N, L63V, T74S	B
Jones (2012)	129964	129964	JN669478	PI	NA	D30N	L10F, N88D	G17E, K20T, E35N, M36I, D60E, Q61D, L63P, I72V	B
	130018	130018	JN669479	PI	NA	D30DN	N88D	K20R, E35D, M36V, N37D, R41K, D60E, I62V, L63P, A71T, V77I	B
	135162	135162	JN669539	PI	NA	M46I	L10LFI, N88D	I13V, K14R, I15V, Q18QH, N37D, D60DE, L63P, I93IL	B
	135925	135925	JN669553	PI	NA	D30N	N88D	I13V, L19I, A22D, N37S, L63LP, A71AITV, I72V, V77I, I93L	B
	142261	142261	JN669616	PI	NA	D30N, L90LM	N88D	N37S, I62IV, L63P, V77I, I93L	B
	149974	149974	JN669742	PI	NA	M46I, I54V, V82C, L90M	L10F, K43KT, N88D	K14GR, I15V, K20I, R41K, I62V, L63P, A71V, I72L, V77I, I85V	B
	154670	154670	JN669822	PI	NA	V32I, M46I, I47V, I54V, V82A, L90M	L33F, F53L, N88D, L89V	L10I, T12K, I13V, I15V, K20R, E35D, M36I, N37E, K55KR, R57K, D60E, Q61D, I66F, A71V, I72T	B
	154985	154985	JN669829	PI	NA	D30N	L10LF, N88D	T12N, L19I, E35ED, M36MI, K43KR, L63LP, I64V, I85IV	B
	155277	155277	JN669838	PI	NA	D30N	N88D	T12N, L19I, E35D, M36I, N37ND, I62V, L63P, A71V, I93L	B
	157710	157710	JN669897	PI	NA	D30N, M46L	L33F, N88D	L10C, T12I, R41K, I62V, L63P, I64L, G68E, A71V, I72T, V77I, I93L	B
	158093	158093	JN669907	PI	NA	D30N	N88D	I13V, K20T, K45R, R57K, L63P, I64V, A71V, I72IM, V77I	B
	158997	158997	JN669937	PI	NA	D30N	L10F, N88D	K45R, L63P, V77I, I93IL	B
	161153	161153	JN669994	PI	NA	D30N	L10LF, N88D	T12N, L19I, R41K, D60E, L63S, I64V, A71V, I72IR, V77I	B
	161316	161316	JN670001	PI	NA	M46I, L90M	N88D	L10V, I13V, I15V, Q18LM, L19I, K20T, E35N, M36I, R41K, K55R, R57K, Q61D, L63P	B
	165546	165546	JN670104	PI	NA	D30N	N88D	I13IV, I15V, K20KT, M36MI, R41K, K45KR, I62IV, L63P, V77VI, I93L	B
	166268	166268	JN670123	PI	NA	D30N	N88D	E35D, M36I, L63P, K70R	B
	167925	167925	JN670167	PI	NA	L90M	L33I, N88D	L10I, I15V, L19I, E35D, M36I, D60E, I62IV, L63P, A71T, I85V, Q92R, I93L	B
	168410	168410	JN670181	PI	NA	D30N, M46MI	L10F, N88D	T12E, K14R, L19PT, K20I, Q61N, I62IV, K70E, A71AV, V77I	B
	171152	171152	JN670249	PI	NA	D30N	L33LF, N88D	T12N, N37D, R41K, K45KR, I62V, L63S, A71V, I72M, V77I, I93L	B
	173656	173656	JN670340	PI	NA	D30N	N88D	I13V, E35D, N37T, R57K, L63P, A71V, I72V, V77I	B
	175084	175084	JN670351	PI	NA	D30N	N88D	I13V, K14R, E35D, N37E, L63P, H69N, A71V, V77I	B
	181752	181752	JN670584	PI	NA	D30N	L10F, N88D	T12P, I13V, K14R, K20T, M36I, D60DE, L63P, I64V, I72V, V75I	B
	181782	181782	JN670586	PI	NA	D30N	N88D	I13V, E35D, M36MI, N37S, L63P, A71V, I72V, V77I	B
	185236	185236	JN670698	PI	NA	D30N	M46MV, N88D	I13V, L19T, N37S, L63P, A71T, V77I, I93L	B
	188852	188852	JN670760	PI	NA	D30N, I54V, L90M	L10F, V11VI, L33I, Q58E, N88D	T12N, I13V, L19M, K20T, E35N, M36I, N37S, P39Q, R57K, D60DN, Q61QHKN, I62IV, L63P, A71T, I72IM	B
	189585	189585	JN670778	PI	NA	D30N	L33F, N88D	I13V, I15V, L19I, K20R, E35D, M36I, P39PL, R41K, R57K, D60E, Q61D, L63C, A71V, I93L	B
	191761	191761	JN670833	PI	NA	D30N	N88D	L10I, E35D, M36MV, N37D, L63P, L89LP, I93L	B
	193164	193164	JN670884	PI	NA	D30N, I84V, L90M	L33I, Q58E, N88D	W6S, I13V, K20R, E35D, M36I, N37D, R57K, I62V, L63P, A71T, I72E	B
	193453	193453	JN670899	PI	NA	M46I, I47V, I54V, V82A	L10F, K43T, N88D	I15V, L19IT, K20I, E35N, M36I, R41RK, R57K, D60E, Q61N, I62IV, L63P, A71V, I85IV	B
	194100	194100	JN670925	PI	NA	D30N	N88D	L10I, E35D, M36I, R41K, K45R, D60E, Q61E, I62V, L63P, I93L	B
	195505	195505	JN670984	PI	NA	M46L, L90LM	N88D	L10M, I13IV, I15IV, K20T, N37ND, L63LP, I66IF, A71AV, V77VI, L89LI	B
	198263	198263	JN671112	PI	NA	D30N	N88D	L10Y, I13V, K43R, L63P, V77VI, I93L	B
	198599	198599	JN671125	PI	NA	D30N, M46I	N88D	T12S, I13V, I15V, L63P, V77I	B
	199497	199497	JN671171	PI	NA	D30N	N88D	G16E, K20M, E35G, M36I, N37NH, P39S, I62V, L63P, A71V, T74TS, I93L	B
	201517	201517	JN671227	PI	NA	D30N, I54V, I84V	L10F, N88D	I15V, K20T, E35D, M36L, L63P, I64IV, A71V, I72M, T74TS, V75VI, V77I, I85V	B
	203136	203136	JN671300	PI	NA	D30N, M46I, I54V, V82A	L10F, L33F, K43T, N88D	I13V, I15V, E35D, M36L, I62V, L63P, V77I, T91S, Q92EK	B
	206281	206281	JN671396	PI	NA	D30N	L33F, N88D	I15IV, E35D, M36I, R41K, R57K, Q61N, L63S, I64L, H69HY, I72T	B
Alcantara (2013)	BRGO4043	BRGO4043	JN114143	LPV		D30N, L90M	N88D	P39S, K45R, R57K, I62V, L63P, A71T, V77I, I93L	B

Protease Inhibitors

Database

Resources

Team