| Author (yr) |
Patient |
Isolate |
Acc# |
PIs |
Wks | PIMajorDRMs |
PIMinorDRMs |
OtherMut | Subtype |
| Yamaguchi (1995) | RJ9532 | RJ9532 | U31388 | None | | | | I15V, R41K, L63P, V82I | B |
| Hammer (1997) | ACTG320_2337 | 2337 | | None | | | | K14KR, R41K, L63A, V82I | B |
| | ACTG320_3223 | 3223 | | None | | | | E35D, N37S, R41K, K43R, R57K, I62V, L63P, A71T, V77I, V82I, I93L | B |
| | ACTG320_3230 | 3230 | | None | | | | I15V, E35D, N37NS, K43N, L63LHQ, I64V, V82I | B |
| Cabana (1999) | Cab-b | B0 | AF102280 | None | | | | K14R, E35D, N37D, G52R, L63P, V82I | B |
| Belec (2000) | r73 | r73_m0 | AF204394 | None | | | | L33V, N37S, R41K, I62V, L63P, V82I, I93L | B |
| Albrecht (2001) | ACTG364_1062 | 1062 | | None | | | | R41K, Q61H, L63T, V82I | B |
| | ACTG364_903 | 903 | | None | | | | T12S, L63P, V77I, V82I, I93L | B |
| Eshleman (2001) | A015 | AF357619 | AF357619 | None | | | | N37NS, L63P, V82I | B |
| | A100 | AF357701 | AF357701 | None | | | | I15V, R41K, L63LP, V82I, I93L | B |
| | A110 | AF357711 | AF357711 | None | | | | I15V, R41K, L63S, K70R, V77VI, V82I | B |
| Gonzales (2001) | CA5627 | CA13971 | AY032093 | None | | | | I13V, L38LI, R41RK, L63P, V77I, V82I, L89M | B |
| | CA6577 | CA16492 | AY032483 | None | | | | T12P, L19IM, K20R, L33V, L63P, I64V, C67X, V82I | B |
| Perez (2001) | EP-2000 | EP-2000 | AF320546 | None | | | | P39T, R41K, D60E, L63P, I64V, V82I | B |
| Perno (2001) | PCF_Pat31 | PCF3271 | AF376677 | None | | | | E35ED, P39PL, R41RK, V82I | B |
| Servais (2001) | JS93041 | JS93041 | AJ279607 | None | | | | R41K, V82I, I93L | B |
| | JS97414 | JS97414 | AJ279675 | None | | | | R41K, V82I | B |
| Dumans (2002) | AD-02 | AD-02 | AF413831 | None | | | | I13V, N37S, R41K, H69Y, V77I, V82I, L89M | B |
| | AD-05 | AD-05 | AF413824 | None | | | | I13V, E35D, N37S, R41K, H69Y, V77I, V82I, L89M | B |
| | AD-49 | AD-49 | AF413861 | None | | | | I13V, E35D, N37S, R41K, H69Y, V77I, V82I, L89M | B |
| Podzamczer (2002) | 30 | BAA139052 | | None | | | | G16E, E35D, I62V, L63S, V82I | B |
| Brindeiro (2003) | BRP2118 | BRP2118 | AY213399 | None | | | | L19I, N37T, R41K, H69K, V82I, L89M | B |
| | BRCN26 | BRCN26 | AY213315 | None | | | | R41K, L63A, V82I, C95S | B |
| | BRC1556 | BRC1556 | AY213545 | None | | | | K14R, N37D, L63T, I72T, V77I, V82I, I93L | B |
| | BRRJ930 | BRRJ930 | AY213294 | None | | | | N37S, Q61E, H69Y, V82I, C95S | B |
| Maljkovic (2003) | MI_Pat36 | 01SE21259 | AY165256 | None | | | | T12S, L19V, E35D, P39T, K43R, R57K, L63P, V82I, I93L | B |
| | MI_Pat48 | 98SE15418 | AY165197 | None | | | | L10LI, T12TK, N37S, R41K, R57K, Q61H, L63P, V82I, I93L | B |
| Park (2003) | PSW_Pat42 | 02KR_PR12 | AY242897 | None | | | | I62V, L63P, V77I, V82I, L89X, I93L | B |
| Shafer (2003) | A384_0247 | 0247a | EF548210 | None | | | | I15IV, R41K, Q61E, I62V, A71T, I72IT, V77VI, V82I, I93L | B |
| | A384_2455 | 2455a | EF548316 | None | | I50IL | | I15V, E35D, R41K, V82I | B |
| | A384_0917 | 0917a | EF548344 | None | | | | L10I, I15V, E35D, N37D, R57K, I62V, L63V, I66IM, A71T, V82I, I93L | B |
| | A384_4001 | 4001a | EF548438 | None | | | | T12TA, I15V, L19T, K20R, E35D, R41K, D60E, I62V, L63P, E65D, K70R, V82I, I93L | B |
| | A384_6265 | 6265a | EF548493 | None | | | | L19I, N37S, R41K, L63P, V82I, I93L | B |
| | A384_2769 | 2769a | EF548534 | None | | I50IV | | R8Q, L10I, I13V, L63P, I72V, V77I, V82I, I93L | B |
| | A384_1024 | 1024a | EF548558 | None | | | | T12A, I15V, L19T, D25DN, R41K, L63P, I64IV, K70R, V82I | B |
| | A384_1328 | 1328a | EF548708 | None | | | | I62V, L63A, I64IL, V82I, I93L | B |
| | A384_3575 | 3575a | EF548724 | None | | | | L63C, V82I, I93L | B |
| | | 3575b | EF548725 | None | | | | I15IV, L63C, V82I, I93L | B |
| | | 3575c | | None | | | | L63C, V82I, I93L | B |
| | A384_7259 | 7259a | EF548897 | None | | | | I15V, E35D, D60E, I62IV, L63LAPV, V82I | B |
| | A384_5617 | 5617a | EF549150 | None | | | | R41RK, I62V, L63PS, I64IL, V77I, V82I, I93L | B |
| | A384_2581 | 2581a | EF549162 | None | | | | E35D, N37D, L63S, I64V, E65D, V82I | B |
| | A384_2585 | 2585b | EF549172 | None | | | | I15IV, E35D, R41RK, L63A, V82I | B |
| | A384_2621 | 2621a | EF549182 | None | | | | L19Q, Q61K, I62V, V82I | B |
| | A384_1832 | 1832a | EF548423 | None | | | | T12AS, L19I, R41K, K45KR, R57K, Q61H, L63LP, V82I, I93L | B |
| Su (2003) | 02HNsmx2 | 02HNsmx2 | AY275557 | None | | | | R8Q, P9T, E35D, R57K, I62V, L63P, I72V, V77I, V82I, I93L | B |
| Vaughan (2003) | VHE_Pat24 | VHE143prrt | AY267328 | None | | | | L63H, K70T, I72V, V82I | B |
| | VHE_Pat54 | VHE027prrt | AY267277 | None | | | | I15V, N37S, R41K, L63P, E65D, V82I | B |
| | VHE_Pat62 | VHE098prrt | AY267295 | None | | | | I15V, L19I, E35D, V82I | B |
| Gulick (2004) | RG127 | RG127w0 | | None | | | | T12S, I15V, L19I, M36I, L63P, I64V, V82I, I93L | B |
| | | RG127w20 | | None | | | | T12S, I15V, L19I, M36I, L63P, I64V, V82I, I93L | B |
| | | RG127w31 | | None | | | | T12S, I15V, L19I, M36I, L63P, I64V, V82I, I93L | B |
| | RG170 | RG170w0 | | None | | | | L19I, E35D, L63LP, V82I, L89I | B |
| | RG263 | RG263w1 | | None | | | | L10LI, I15V, E35D, M36I, R41K, K45R, R57K, I62IV, L63ST, I72T, V82I, I93IL | B |
| | | RG263w22 | | None | | | | L10LI, I15V, E35D, M36I, R41K, K45R, R57K, L63ST, K70KI, I72T, V82I, I93IL | B |
| | RG364 | RG364w0 | | None | | | | E35D, R41K, L63P, A71T, I72T, V82I, I93L | B |
| | RG371 | RG371w0 | | None | | | | P39S, R41RK, I62V, L63P, V82I | B |
| | | RG371w121 | | None | | | | P39S, R41RK, I62V, L63P, V77VI, V82I | B |
| | RG478 | RG478w0 | | None | | | | I15V, R41K, V82I | B |
| | | RG478w80 | | None | | | | I15V, R41K, V82I, I93L | B |
| | | RG478w107 | | None | | | | I15V, R41K, V82I, I93L | B |
| | RG490 | RG490w0 | | None | | | | E35D, N37NT, R57K, L63S, I64V, V77I, V82I | B |
| | RG510 | RG510w0 | | None | | | | I15V, L19I, E35D, R41K, L63P, V82I, I93L | B |
| Kuritzkes (2004) | KDR_pat36 | A0036 | AY527853 | None | | | L33I | E21EG, I62IV, L63ST, A71T, V77I, V82I | B |
| | | A0037 | AY527854 | None | | | L33I | E21EG, I62IV, L63ST, A71T, V77I, V82I | B |
| | KDR_pat142 | A0174 | AY527991 | None | | | | E35D, L63S, V77I, V82I | B |
| | | A0175 | AY527992 | None | | | | K14KR, E35D, L63S, V77I, V82I | B |
| | KDR_pat267 | A0365 | AY528182 | None | | | | T12A, N37NS, R41RK, I62V, L63H, I64V, V82I | B |
| | | A0367 | AY528184 | None | | | | T12A, I13IV, L33LV, N37NS, R41RK, I62V, L63H, I64IV, V82I | B |
| | | A0368 | AY528185 | None | | | | T12A, I13IV, L33LV, N37NS, R41K, I62V, L63H, I64IV, V82I | B |
| Machado (2004) | N77 | N77 | AY569902 | None | | | | T12S, L33V, M36I, N37S, R41K, R57K, L63P, K70R, V82I, L89M | B |
| Pariente (2004) | pt45 | 45 | AY316034 | None | | | | R41K, L63P, I64V, V82I | B |
| Rhee (2004) | CA7880 | CA20319 | AY798491 | None | | | | L19Q, N37C, V82I | B |
| Arien (2005) | VI218 | VI218 | DQ177222 | None | | | | K14R, I15V, R41K, V82I | B |
| Gallant (2005) | JEG20 | JEG20_w12 | DQ199593 | None | | | | K14KR, L63P, H69Q, V77VI, V82I | B |
| Liu (2005) | 02HNsmx2 | 02HNsmx2 | DQ007901 | None | | | | R8Q, P9T, E35D, R57K, I62V, L63P, I72V, V77I, V82I, I93L | B |
| Rhee (2005) | 143H175 | 143H175W56 | | None | | | | P39T, L63P, V77I, V82I | B |
| | CA8008 | CA20513 | AY797641 | None | | | | M36I, N37D, I62V, L63A, V82I, I93L | B |
| | CA14178 | CA33287 | AY797996 | None | | | | I62IV, L63AT, V82I | B |
| | CA14348 | CA33566 | AY798053 | None | | | | I13V, V82I | B |
| | CA14380 | CA33624 | AY798065 | None | | | | L19I, N37S, R41K, L63S, V82I, I93L | B |
| | CA14399 | CA33655 | AY798073 | None | | | | I15V, M36I, R57K, D60E, I62V, L63AT, I64V, V82I | B |
| | CA14544 | CA33895 | AY798114 | None | | | | T4P, R57K, L63P, I72V, V75I, V82I | B |
| Jayaraman (2006) | 1-00-0039 | 1-00-0039 | | None | | | | R8*, L19Q, E35D, N37S, R41K, I62M, L63P, A71V, V82I, I93L | B |
| | 1-00-0039A | 1-00-0039A | | None | | | | R8R*, L19Q, E35D, N37S, R41K, I62M, L63P, A71V, V82I, I93L | B |
| | 2-00-0122 | 2-00-0122 | | None | | | | E35D, M36I, N37D, L63P, V82I, I93L | B |
| | 2-00-0496 | 2-00-0496 | | None | | | | L19I, L63C, H69Q, V82I | B |
| | 2-00-0529 | 2-00-0529 | | None | | | | K14R, E35D, N37D, R57K, I62V, L63S, V82I, I93L | B |
| | 2-00-0539 | 2-00-0539 | | None | | | | L10I, N37S, I62V, L63P, V82I, I93L, G94H | B |
| | 2-00-0617 | 2-00-0617 | | None | | | | L19Q, E35D, N37S, R41K, L63P, V82I, I93L | B |
| | 2-00-0655 | 2-00-0655 | | None | | | | E35D, N37D, R57K, I62V, L63S, V82I, I93L | B |
| | 2-01-0088 | 2-01-0088 | | None | | | | E35D, N37D, R57K, I62V, L63S, V82I, I93L | B |
| | 3-00-0123a | 3-00-0123a | | None | | | | L10I, M36I, K45R, I62V, L63P, V77I, V82I, I93L, G94H | B |
| | 4-00-0003 | 4-00-0003 | | None | | | | E35D, I64V, V82I | B |
| Lama (2006) | Pt1197 | 1197 | | None | | | | L10I, V11T, K14KR, Q18H, Q61E, L63S, I64L, A71V, I72T, V77I, V82I, I93L | B |
| | Pt1364 | 1364 | | None | | | | T12S, L19Q, R41K, L63AP, E65ED, K70R, P79A, V82I | B |
| | Pt3003 | 3003 | | None | | | | K14R, R41K, D60E, Q61E, I62V, L63P, V77I, V82I, I93L | B |
| | Pt3010 | 3010 | | None | | | | T4TN, I15V, G16E, L63T, E65D, V82I | B |
| | Pt3044 | 3044 | | None | | | | R41K, R57RK, D60E, Q61E, I62V, L63P, C67S, I72M, V82I, I93L | B |
| | Pt3133 | 3133 | | None | | | | K14R, N37S, Q61E, I62V, L63P, I64L, I72IV, V82I, L89LI, I93L | B |
| | Pt3193 | 3193 | | None | | | | E35D, N37S, R41RK, I62IV, L63P, I72V, V82I, I93L | B |
| | Pt3272 | 3272 | | None | | | | L10I, K14R, I15V, N37T, Q61E, I62V, L63P, P79S, V82I, I93L | B |
| | Pt3316 | 3316 | | None | | | | I3V, L10V, I13V, G17E, L33V, K45R, L63A, V82I, L89M | B |
| | Pt3338 | 3338 | | None | | | | E35D, N37S, R41K, L63P, V82I, I93L | B |
| | Pt3537 | 3537 | | None | | | | E35D, N37Y, R41K, Q61E, I62V, L63P, I64M, I72IATV, V77I, V82I, I93L | B |
| | Pt3555 | 3555 | | None | | | | E35D, R41K, L63P, I64L, V82I | B |
| | Pt3589 | 3589 | | None | | | | T12A, I13V, L19I, I62V, L63T, I64M, A71V, V77I, V82I, I93L | B |
| | Pt3603 | 3603 | | None | | | | L10V, T12I, E35D, N37D, L63P, A71T, V82I, I93L | B |
| | Pt3652 | 3652 | | None | | | | R41RK, Q61E, I62V, L63PS, I64M, V77VI, V82I, I93L | B |
| | Pt3691 | 3691 | | None | | | | K14R, I15V, E35D, R41K, D60E, Q61E, I62V, L63P, V77I, V82I, I93L | B |
| | Pt3722 | 3722 | | None | | | | E35ED, N37S, Q61E, I62V, L63P, I64L, V82I, I93L | B |
| | Pt3750 | 3750 | | None | | | | T12P, I15V, L19I, N37S, L63P, I72T, V77I, V82I, I93L | B |
| | Pt3753 | 3753 | | None | | | | I15IV, G16GE, I62V, L63H, I64V, K70KR, I72T, V82I | B |
| | Pt3784 | 3784 | | None | | | | K14KR, I15V, Q18H, I64L, V82I, L89M | B |
| | Pt3799 | 3799 | | None | | | | L10I, V11T, R41RK, D60DE, Q61E, I62V, L63P, V77I, V82I, I93L | B |
| | Pt3832 | 3832 | | None | | | | E35D, N37S, Q61E, I62V, L63P, V77VI, V82I, I93L | B |
| | Pt4074 | 4074 | | None | | | V11I | T12TAS, E35ED, N37NS, Q61E, I62V, L63S, I64L, A71V, I72T, V77I, V82I, I93L | B |
| | Pt4075 | 4075 | | None | | | V11I | Q61E, I62V, L63S, I64L, A71V, I72S, V77I, V82I, I93L | B |
| | Pt4079 | 4079 | | None | | | V11I | T12TAS, E35ED, N37NS, Q61E, I62V, L63S, I64L, A71V, I72T, V77I, V82I, I93L | B |
| | Pt4105 | 4105 | | None | | | | L10LI, T12PS, I15V, L19M, I62V, L63P, C67EG, I72IT, V77VI, V82I | B |
| | Pt4117 | 4117 | | None | | | | T12P, I15V, L19IM, I62V, L63P, C67G, K70R, I72T, V82I | B |
| | Pt4527 | 4527 | | None | | | | L10I, V11A, K14R, E35D, Q61E, I62V, L63S, I64L, A71V, I72T, V82I, I93L | B |
| | Pt4604 | 4604 | | None | | | | M36I, R41K, D60E, Q61E, I62V, L63P, C67S, A71V, I72IATV, P79PS, V82I, I93L | B |
| | Pt4640 | 4640 | | None | | | | A22AD, I62V, L63HQ, I64V, I72T, V82I | B |
| | Pt5081 | 5081 | | None | | | | I13V, R41K, I62V, L63S, I64V, V82I | B |
| | Pt5190 | 5190 | | None | | | | L10I, V11A, K14R, Q61E, I62V, L63S, I64L, A71V, V77I, V82I, I93L | B |
| | Pt5620 | 5620 | | None | | | | Q61QE, I62MV, I64IM, A71AT, V82I, I93L | B |
| | Pt5690 | 5690 | | None | | | | T12P, K14R, M36I, Q61E, I62V, L63S, I64M, V82I, I93L | B |
| | Pt5704 | 5704 | | None | | | | T12P, G16E, L19I, E35D, N37H, R41K, Q61G, I62V, L63P, I64L, I72T, V77I, V82I, I93L | B |
| | Pt5755 | 5755 | | None | | | | K14R, Q61E, I62V, L63P, I64L, I72T, V82I, I93L | B |
| | Pt5778 | 5778 | | None | | | | I3V, Q61E, I62V, L63S, I64M, A71T, V77I, V82I, I93L | B |
| | Pt5795 | 5795 | | None | | | | K14R, N37NS, R41RK, Q61E, I62V, L63P, I64L, I72T, V82I, I93L | B |
| | Pt5816 | 5816 | | None | | | | K14R, Q61E, I62V, L63P, I64L, I72T, V82I, I93L | B |
| | Pt6223 | 6223 | | None | | | | L10V, T12A, I13V, K14R, M36I, D60E, Q61E, L63P, K70R, V82I, L89M | B |
| Lindstrom (2006) | SIIDC0261 | SIIDC0261 | | None | | | | T12S, L19V, E35D, P39T, K43R, R57K, L63P, V82I, I93L | B |
| Razafindratsimandresy (2006) | RR_MAD-HF003 | MAD-HF003 | DQ345012 | None | | | | E35D, L63P, I64L, V82I | B |
| Saad (2006) | MDS_02UAKV108 | 02UAKV108 | DQ055286 | None | | | | L33V, N37Y, I62V, L63P, I64L, H69Q, V82I | B |
| Valle-Bahena (2006) | RT-71 | PROT-RT-71 | DQ150730 | None | | | | L19Q, N37S, L63P, V82I, I93L | B |
| Brumme (2007) | 1080 | PR_1080 | EF368390 | None | | | D30DE | L33V, E35D, N37H, R57K, Q61E, L63P, C67E, V82I, L89M | B |
| | 1092 | PR_1092 | EF368402 | None | | | | E35D, M36I, N37D, L63P, V82I, I93L | B |
| | 1125 | PR_1125 | EF368435 | None | | | | I15V, G16E, E35D, N37H, R41K, L63C, V82I, I93L | B |
| | 1423 | PRRT_1423 | EF368733 | None | | | | L10I, E35D, M36I, N37ND, R41RK, I62V, L63P, A71V, V77I, V82I, I93L, G94H | B |
| | 1441 | PRRT_1441 | EF368751 | None | | | | L10I, T12N, L19I, I62V, L63P, V77I, V82I, I93L, G94H | B |
| | 1443 | PRRT_1443 | EF368753 | None | | | | L19Q, E35D, M36I, N37D, L63P, V82I, I93L | B |
| | 1882 | PRRT_1882 | EF369192 | None | | | | M36I, N37D, I62V, L63C, V82I, I93L | B |
| Dilernia (2007) | F022 | F022 | EF120084 | None | | | | L63A, V77I, V82I, I93L | B |
| | F202 | F202 | EF120171 | None | | | | I15V, G16E, I62V, L63H, I64V, I72T, V82I | B |
| | F245 | F245 | EF120195 | None | | | | T12K, I15V, L19I, E35D, M36I, P39T, R41K, Q61D, H69Q, V82I, I93L | B |
| Gatanaga (2007) | A04-201013-1 | A04-201013-1 | AB640068 | None | | | | T12K, I15V, L19IV, M36I, R41K, L63T, I64IM, V82I | B |
| | C04-51110155-1 | C04-51110155-1 | AB640255 | None | | | | E35D, R57K, L63P, I64V, I72E, V82I | B |
| | C04-5555-5718-1 | C04-5555-5718-1 | AB640392 | None | | | | T12K, I15V, L19I, M36I, R41K, L63T, I72IT, V82I | B |
| Lin (2007) | 4V123 | 4V123 | EF078168 | None | | | | I15V, E35D, N37S, R41K, L63P, K70R, V82I | B |
| Liu (2007) | HN002 | HN002 | EU079062 | None | | | | I62V, L63P, I72E, V77I, V82I, I93L | B |
| | AH023 | AH023 | EU079077 | None | | | | E35D, Q61E, L63P, I72V, V77I, V82I, I93L | B |
| Rios (2007) | CH59 | MR_CH59 | EF193953 | None | | | | I62V, L63A, V82I, I93L | B |
| | CH119 | MR_CH119 | EF194021 | None | | | | L10I, K14R, N37S, P39T, L63P, V82I | B |
| Sanchez Onoro (2007) | 535568 | 535568 | | None | | | | L38I, R41K, L63LFPS, I64IV, V82I, I93L | B |
| | 665856 | 665856 | | None | | | | T12R, I15V, L19I, M36MI, I62V, L63S, E65ED, I72V, V82I | B |
| | 703703 | 703703 | | None | | | | T12R, I15V, L19PQ, E35D, R57K, I62V, L63P, I72V, V82I | B |
| Varella (2007) | 23ini | 23ini | | None | | | | M36I, N37D, K43R, R57K, L63P, V82I, I93L | B |
| Vicenti (2007) | 4887 | 68282R | EF376529 | None | | | | I13IV, L63PS, I64IM, C67CY, V77I, V82I | B |
| | 5515 | 74634R | EF376598 | None | | | | E34EK, E35D, N37S, R41K, R57K, L63P, V77I, V82I, I93L | B |
| Zhong (2007) | D0014 | 05CN_014 | EF199561 | None | | | | E35D, R41K, D60E, L63P, V82I, I93L | B |
| Bang (2008) | 054 | BJH_054 | EF157910 | None | | | | L10I, T12A, N37S, R41K, I62V, L63T, V82I | B |
| | 076 | BJH_076 | EF157932 | None | | | | T12A, K14R, N37S, I62V, L63A, V82I | B |
| Chang (2008) | TW0222a | TW0222a | | None | | | | N37D, I62V, I64V, V82I, I93L | B |
| | TW0379a | TW0379a | | None | | | | T12K, I15V, E35D, R41K, Q61E, L63T, V82I, I93L | B |
| | TW9493a | TW9493a | | None | | | | I15V, E35D, N37S, R41K, L63P, K70R, V82I | B |
| Ferreira (2008) | 427 | BR05PR427 | EU340712 | None | | | | L63A, V82I, I93L | B |
| Holguin (2008) | 11339 | 99SP-11339 | DQ926899 | None | | | | I13V, K14R, I15L, K20I, M36I, N37D, L63P, H69K, V82I, L89M | B |
| Holguin (2008) | SP102-334951 | SP102-334951 | EU255448 | None | | | | K14R, R41K, I62V, L63H, V77I, V82I, I93L | B |
| | SP10-345339 | SP10-345339 | EU255495 | None | | | | K14R, I15IV, M36I, N37D, R41K, I62V, V82I | B |
| | SP23-350232 | SP23-350232 | EU255508 | None | | | | L10I, I13V, K14KR, I15V, M36I, N37T, R41K, R57K, L63T, C67S, V82I, L89M | B |
| Ibe (2008) | 280 | 280 | AB356291 | None | | | | K14R, I15V, R41K, L63T, V82I, I93L | B |
| | 302 | 302 | AB356307 | None | | | | T12S, E35D, R57K, L63P, I64L, I72V, V82I | B |
| | 317 | 317 | AB356318 | None | | | | T12A, K14R, I15IV, L19LI, R41K, L63T, V77I, V82I, I93L | B |
| Lloyd (2008) | CR012 | 03HN_CR012 | EU312639 | None | | | | M36I, I62V, L63P, V82I | B |
| | CR145 | 03HN_CR145 | EU312706 | None | | | | I15V, G16E, R41K, I62V, L63A, I72MV, V82I | B |
| | CR143 | 03HN_CR143 | EU312730 | None | | | | T12P, K14R, I15V, L19LM, M36I, R41K, I62V, L63C, A71T, I72T, V82I, I93L | B |
| | TX053 | 03HN_TX053 | EU312804 | None | | | | L19I, R41K, V82I | B |
| | TX073 | 03HN_TX073 | EU312815 | None | | | | K14R, L19I, N37T, R41K, I62V, L63P, I64V, I72M, V82I | B |
| | TX081 | 03HN_TX081 | EU312822 | None | | | | E35D, N37D, R41RK, D60E, Q61E, I62V, L63T, E65D, I72T, V77I, V82I, L89LM | B |
| | TX115 | 03HN_TX115 | EU312846 | None | | | L33I | N37C, L63P, I64V, V82I, I93L | B |
| | TX168 | 03HN_TX168 | EU312906 | None | | | | I15V, L19I, M36I, R41K, I62V, L63Q, V82I | B |
| | CR036 | 03HN_CR036 | EU312971 | None | | | | G16E, N37S, I62V, L63T, I72T, V77I, V82I | B |
| McConnell (2008) | NV44 | NV44 | EU288129 | None | | | | T12P, K14R, E35D, N37D, R57K, L63T, I64IL, A71T, V82I | B |
| Palacios (2008) | 41105 | 41105 | | None | | | L33IV | N37NS, R41K, L63P, V82I, L89I, I93L | B |
| Riddler (2008) | RG89703 | RG89703w17 | | None | | | | L63P, I72V, V82I, I93L | B |
| | | RG89703w24 | | None | | | | L63P, I72V, V82I, I93L | B |
| Brown (2009) | CAS_170_11_999163 | CAS_170_11_999163 | FJ030711 | None | | | | I15V, E35D, N37D, L63P, I72V, V82I, I93L | B |
| Brumme (2009) | H8506 | H8506 | GQ371925 | None | | | | L10I, T12TA, M36I, N37K, R41K, I62V, L63P, I72IM, V82I, I93L, G94N | B |
| | J2509 | J2509 | GQ371936 | None | | | | I15V, E35D, N37NS, R57K, L63P, V82I, I93L | B |
| | K3528 | K3528 | GQ371960 | None | | | | I13IK, K14KT, L19V, K20R, E35D, N37D, I64V, V82I | B |
| | L2570 | L2570 | GQ371983 | None | | | | R57RK, I62V, L63P, I72V, V82I, I93L | B |
| | M5534 | M5534 | GQ372011 | None | | | | L63C, I72IV, V77I, V82I | B |
| | Y2579 | Y2579 | GQ372279 | None | | | | T12S, L19EV, E35D, Q61H, L63S, V77I, V82I, I93L | B |
| | PRRT_4157 | PRRT_4157 | GQ303846 | None | | | | L10I, K45R, I62V, L63P, V77I, V82I, I93L, G94H | B |
| | PRRT_4158 | PRRT_4158 | GQ303847 | None | | | | L10I, T12E, M36MI, N37NS, I62V, L63P, V77I, V82I, I93L, G94H | B |
| Cardoso (2009) | BRGO3081 | BRGO3081 | FJ594147 | None | | | | N37NS, I62V, L63A, H69K, V82I, I93L | B |
| Castillo (2009) | 53 | 53PROT | GQ202928 | None | | | | I15V, L19I, L63C, H69Q, V77I, V82I | B |
| | 42 | 42PROT | GQ202968 | None | | | | L19I, E35D, N37S, R41K, L63S, I64V, V82I | B |
| Cuevas (2009) | X2473_1 | X2473_1 | GU326107 | None | | | | E35D, M36I, I62V, L63P, H69Q, V82I | B |
| | X2576_1 | X2576_1 | GU326143 | None | | | | E35D, M36I, Q61E, I62V, L63P, H69Q, V82I | B |
| | X2607_1 | X2607_1 | GU326149 | None | | | | I15V, E35D, N37H, R41K, I62V, V77I, V82I, I93L | B |
| | X2685_1 | X2685_1 | GU326169 | None | | | | E35D, M36MI, Q61E, I62V, L63P, C67G, H69Q, V82I | B |
| Dumans (2009) | 422_05 | 422_05 | FJ405059 | None | | | | I15V, E35D, M36I, R41K, R57K, D60E, I62V, L63P, V82I, I93L | B |
| | 84_05 | 84_05 | FJ405115 | None | | | | T12S, I15V, M36I, N37E, R57K, Q61R, I62V, L63P, I72E, V82I | B |
| Fujisaki (2009) | 643 | 643 | AB442306 | None | | | | K14R, I15V, R41K, L63P, V82I, I93L | B |
| | 660 | 660 | AB442319 | None | | | | T12I, I13V, I15V, R41K, L63A, I64IV, V82I, I93L | B |
| | 680 | 680 | AB442334 | None | | | | I15V, G16AE, E35D, R41RK, L63A, V82I, I93L | B |
| Luo (2009) | xf.779 | 05HBxf.779 | FJ375040 | None | | M46I | | D29G, E35D, L63P, A71V, I72E, V77I, V82I, I93L | B |
| | sz.862 | 05HBsz.862 | FJ375066 | None | | | | T12A, K45T, L63P, I72V, V77I, P79S, V82I, I93L, C95R | B |
| | xs.1941 | 06HBxs.1941 | FJ375100 | None | | | | V11A, E35D, L63P, I64V, I72V, V77T, V82I | B |
| | wh.2238 | 06HBwh.2238 | FJ375105 | None | | | | L63P, A71T, I72E, V77I, V82I, I93L | B |
| | xs.2857 | 06HBxs.2857 | FJ375117 | None | | | | E35D, L63P, I72V, V77I, V82I, I93L | B |
| Machado (2009) | P020 | BRAP020 | GQ200797 | None | | | | I15V, D60E, L63P, E65D, K70T, V82I | B |
| | P049 | BRAP049 | GQ200812 | None | | | | E35D, I62V, I72T, V82I | B |
| | P050 | BRAP050 | GQ200813 | None | | | | N37D, I62V, L63P, I72T, V77I, V82I | B |
| | P051 | BRAP051 | GQ200814 | None | | | | N37D, R41K, L63P, K70R, V77I, V82I | B |
| Rhee (2009) | CA7062 | CA42581 | FJ983220 | None | | | | L19I, K20R, M36I, R57K, I62V, L63P, C67Y, V82I | B |
| | CA23854 | CA55335 | FJ983514 | None | | | | I15V, V82I, I93L | B |
| Smith (2009) | PI187 | US2000PI187 | | None | | | | E35D, R41K, L63P, A71T, I72T, V82I, I93L | B |
| | PI273 | US1997PI273 | | None | | | | I15V, R41K, W42WG, I62V, L63A, V82I, I93L | B |
| | CR60 | US2006CR60 | | None | | | | T12TS, L19LV, E35D, N37NS, R41K, L63P, A71T, I72T, V82I, I93L | B |
| | CR111 | US2006CR111 | | None | | | | L63S, K70KR, V82I | B |
| | CR219 | US2007CR219 | | None | | | | T12TI, K43KR, Q61QE, I62V, L63LP, I72IT, V77I, V82I, I93L | B |
| Vercauteren (2009) | pt2148 | 317342903 | GQ398876 | None | | | | I13V, E35ED, M36I, N37NS, L63P, V82I, R87RT | B |
| | pt2108 | 656197433 | GQ398916 | None | | | | T12P, I15V, L19I, E35D, M36I, R41K, L63S, I72T, V82I, I93L | B |
| | pt2045 | 0Wkdhfq6EA | GQ398979 | None | | | | I15V, M36I, L63T, V82I, I93L | B |
| | pt1990 | 1386941364 | GQ399034 | None | | | | I15V, E35D, N37H, R41K, Q61E, I62V, L63P, V82I, I93L | B |
| | pt1962 | 1518073200 | GQ399062 | None | | | | T12S, K14R, I15IV, E35D, N37D, R57K, I62V, L63P, I64L, V77I, V82I, I93L | B |
| | pt1921 | 1767591407 | GQ399103 | None | | | | T12S, R41K, L63P, V82I, I93L | B |
| | pt1836 | 2279348359 | GQ399188 | None | | | | I13V, K14R, M36L, N37D, R41K, I62IV, L63P, I72IT, V82I | B |
| | pt1712 | 3101065746 | GQ399312 | None | | | | L33V, M36I, W42Y, K45R, L63P, A71T, V82I, I93L | B |
| | pt1703 | 3146492576 | GQ399321 | None | | | | T12TAS, I13V, I15V, L63X, I64V, V77VI, V82I | B |
| | pt1589 | 3827011788 | GQ399435 | None | | | | I13V, M36MI, I64IV, V82I | B |
| | pt1078 | 6729571016 | GQ399946 | None | | | | I13V, I15IV, L19LI, M36MIT, L63P, V82I | B |
| | pt992 | 7320382864 | GQ400032 | None | | | | T12P, I13V, K14R, I15V, R41K, D60E, I62V, L63T, A71T, I72E, V82I, I93L | B |
| | pt987 | 7341011079 | GQ400037 | None | | | | L19I, L33V, E35D, N37Y, I62V, L63P, I64IFL, H69K, V82I | B |
| | pt974 | 7394505219 | GQ400050 | None | | | | I13V, K14R, I15V, G16E, R41K, I62V, L63A, H69R, I72V, V82I | B |
| | pt926 | 7700605803 | GQ400098 | None | | | | E35D, N37H, R41K, Q61E, I62V, L63P, V82I, I93L, N98I | B |
| | pt893 | 7897532868 | GQ400131 | None | | | | L19I, L33V, E35D, N37CY, I62V, L63P, I64L, H69K, V82I | B |
| | pt892 | 7897989264 | GQ400132 | None | | | | M36I, R41K, I62M, L63P, V82I, I93L | B |
| | pt855 | 8039756639 | GQ400169 | None | | | | K14R, E35D, N37D, K43R, I62V, L63P, V82I, I93L | B |
| | pt702 | 8878650349 | GQ400322 | None | | | | T12P, L19Q, E35D, M36I, R41K, L63S, A71T, I72V, V82I, I93L | B |
| | pt678 | 8H8RXcnLAU | GQ400346 | None | | | | I13V, L33V, N37S, P39S, R41K, I64V, V82I | B |
| | pt592 | 9436999133 | GQ400432 | None | | | | K14M, I15V, L19R, N37E, L63T, V77I, V82I | B |
| | pt317 | kdnOnSsSkb | GQ400707 | None | | | | I15V, L19IT, E35D, N37S, R41K, Q61E, I62V, V82I, L89M, I93L | B |
| | pt284 | LrB6cigVjz | GQ400740 | None | | | | L10I, T12N, I15V, L19I, E35D, M36I, R41K, D60E, L63P, C67CS, K70T, V82I, I93L | B |
| | pt244 | Np5Xm2ES3q | GQ400780 | None | | | | I15V, R41K, I62V, L63H, V82I, I93L | B |
| | pt210 | PCxKDW1igy | GQ400814 | None | | | | K14E, I15IV, N37NS, R41K, R57RK, I62IV, L63P, E65K, V82I, I93L | B |
| | pt144 | Sdqt5dNaK8 | GQ400880 | None | | | | L10V, E35D, N37S, L63P, V82I | B |
| | pt85 | Vf2Ws3avyK | GQ400939 | None | | | | K14R, I15V, L19E, L63P, V82I, I93L | B |
| | pt28 | YhXkhdHjtE | GQ400996 | None | | | | L19I, M36I, I62V, L63A, V82I, I93L | B |
| Wallis (2009) | GT00349623 | GT00349623 | | None | | | | K14R, I15V, L19V, M36I, R41K, L63V, H69K, V82I, L89M, I93L | B |
| Arruda (2010) | 1027 | 16CE081027 | JQ230606 | None | | | K43T | E35D, R57K, L63A, A71T, V77I, V82I | B |
| Balode (2010) | S2119 | S2119 | GU945131 | None | | | | R57K, L63A, V82I | B |
| Brennan (2010) | Pat165 | ARC-A61 | JN697214 | None | | | | L63A, H69Q, V82I | B |
| | Pat030 | ARC-A210 | JN697349 | None | | | | L63P, I64L, V82I | B |
| | ARC-A199 | ARC-A199 | GU565673 | None | | | | I15V, P39PS, R41K, H69HR, V77I, V82I, I93L | B |
| Ferreira (2010) | p007 | Dip007 | GQ862319 | None | | | | T12M, K14R, I15V, G16E, L19I, E35K, N37T, P39S, R41K, V82I | B |
| | p041 | Dip041 | GQ862335 | None | | | | I15V, L19I, E35D, L63R, K70E, V82I | B |
| Ragonnet-Cronin (2010) | PHAC_060 | PHAC_060 | HM468558 | None | | | | N37S, R41K, I62V, V82I, I93L | B |
| | PHAC_083 | PHAC_083 | HM468581 | None | | | | I15IV, L19LQ, E35D, N37NS, R41K, L63P, V82I, I93L | B |
| | PHAC_098 | PHAC_098 | HM468596 | None | | | | M36IT, N37E, P39PS, I62V, L63P, V82I, I93L | B |
| | PHAC_101 | PHAC_101 | HM468599 | None | | | L33I | L63P, V82I, I93L | B |
| | PHAC_111 | PHAC_111 | HM468609 | None | | | | L10LP, V11VL, T12TK, I13EV, E34EK, R41K, L63P, C67CW, K70R, I72V, V82I, Q92K | B |
| | PHAC_192 | PHAC_192 | HM468690 | None | | | | N37H, R57K, V82I, I85V | B |
| | PHAC_206 | PHAC_206 | HM468704 | None | | | | N37H, R57K, I72IV, V82I, I85IMV | B |
| | PHAC_215 | PHAC_215 | HM468713 | None | | | | K14R, E35D, N37D, R57K, I62V, L63S, V82I, L89LM, I93L | B |
| | PHAC_219 | PHAC_219 | HM468717 | None | | L90M | | I13V, I15V, K20T, E35G, M36I, N37S, R57K, Q61N, L63P, I64V, T74S, V82I, I93L | B |
| | PHAC_486 | PHAC_486 | HM468984 | None | | | | T12A, L19Q, E35D, N37NS, R41K, L63P, V77I, V82I, I93L | B |
| | PHAC_537 | PHAC_537 | HM469035 | None | | | | K14R, E35D, N37S, R41K, L63P, V82I | B |
| | PHAC_558 | PHAC_558 | HM469056 | None | | | | T12S, L19Q, E35D, N37S, R41K, L63P, V82I, I93L | B |
| | PHAC_623 | PHAC_623 | HM469121 | None | | | | N37S, R41K, I62IV, V82I, I93L | B |
| | PHAC_731 | PHAC_731 | HM469229 | None | | | | E35D, N37D, D60E, I62V, L63P, I64L, V77I, V82I, I93L | B |
| Tovanabutra (2010) | KECst_014 | 14-strain2 | FJ623495 | None | | | | I13V, K14R, L19I, K20I, E35Q, M36I, R41K, R57K, C67E, H69K, V82I, L89M | B |
| Carvalho (2011) | O09-83 | O09-83 | GU214090 | None | | | | E35D, P39S, I62V, L63P, I72V, V82I | B |
| | O11-83 | O11-83 | GU214092 | None | | | | M36I, R41K, V82I | B |
| | O12-83 | O12-83 | GU214093 | None | | | | N37S, R41K, L63T, E65D, I72T, V82I | B |
| | O13-83 | O13-83 | GU214094 | None | | | | I13V, I15V, E35D, I62V, L63H, K70T, V82I | B |
| Chibo (2011) | S114 | S114 | JF895301 | None | | | | T12P, L19I, M36I, I62V, L63S, V82I, I93L | B |
| | S125 | S125 | JF895312 | None | | | | E35D, N37S, R41K, I62V, L63H, I64V, I72V, V82I, I93L | B |
| | S143 | S143 | JF895330 | None | | | | I13AV, K14R, E35D, R41K, L63A, A71V, I72V, V77I, V82I, I93L | B |
| | S144 | S144 | JF895331 | None | | | | E35D, N37S, R41K, I62V, L63H, I64V, I72V, V82I, I93L | B |
| | S202 | S202 | JF895389 | None | | | | E35D, R57K, L63P, V77I, V82I, I93L | B |
| de Medeiros (2011) | Pat091 | RS126 | JF487920 | None | | | | T12K, I15V, M36I, N37E, R57K, L63Q, I72V, V82I | B |
| Ferreira (2011) | BRMT2540 | BRMT2540 | HQ638707 | None | | | | E35D, I62IV, L63P, I72T, V82I | B |
| | BRMT2861 | BRMT2861 | HQ638738 | None | | | | T12P, K14R, I15V, E35D, L63A, H69Q, V82I | B |
| | BRMT3111 | BRMT3111 | HQ638747 | None | | | | I15V, G16E, E35D, N37S, L63A, H69K, V82I | B |
| | BRMT508 | BRMT508 | HQ638760 | None | | | | K14R, N37S, R41K, L63P, H69Q, I72V, V82I | B |
| | BRMT741 | BRMT741 | HQ638766 | None | | | | L19Q, M36MI, N37S, L63A, H69K, V82I, I93L | B |
| | BRMT824 | BRMT824 | HQ638769 | None | | | | N37S, H69Q, V82I, R87K | B |
| Hamers (2011) | CP076300736 | CP076300736 | HQ995325 | None | | | | L10V, T12S, L19K, R41K, H69Y, I72T, V82I, L89M | B |
| Mezei (2011) | 3078 | HU3078 | JF419417 | None | | | | I13V, N37S, L63T, I64V, V82I | B |
| Ng (2011) | HM011 | HM011 | HQ539046 | None | | | | T4S, L19V, E35D, M36I, L63P, V82I, I93L | B |
| Rolland (2011) | 0524 | consensus_0524 | JF320008 | None | | | | L10V, T12P, K14R, I15V, R41K, K43R, L63T, A71T, I72T, V82I, I93L | B |
| | 0525 | consensus_0525 | JF320191 | None | | | | Q61E, I62V, L63S, I64L, I72T, V82I, I93L | B |
| Sanabani (2011) | BR2042 | BR2042 | JN692444 | None | | | | E35D, L63P, V77I, V82I, I93L | B |
| | BR1094 | BR1094 | JN692470 | None | | | | I15V, E35D, L63P, V77I, V82I, I93L | B |
| Santos (2011) | J134 | J134_PR | JN010510 | None | | | | N37A, L63P, I72L, V77I, V82I, C95Y | B |
| Truong (2011) | 06001419 | 06001419 | | None | | | | T12A, I15IV, K20R, E35D, N37S, R41K, I62V, L63P, V77I, V82I, I93L | B |
| | 06002507 | 06002507 | | None | | | | I62V, L63A, I72T, V77I, V82I, I93IL, F99FL | B |
| | 05001153 | 05001153 | | None | | | | K14KR, I15V, K20R, E35D, N37S, R41K, I62V, L63P, V77I, V82I, I93L | B |
| Avila-Rios (2012) | M000MC0SSR | M000MC0SSR | KC169209 | None | | | | I13V, K20M, E35D, M36MI, R41K, Q61N, I64V, V82I | B |
| | N000M91LT2 | N000M91LT2 | KC169328 | None | | | | I15V, E35D, R57RK, I62IV, L63P, I64V, V77VI, V82I, I93L | B |
| | N000MBDKT8 | N000MBDKT8 | KC169334 | None | | | | I3V, T12L, R41K, I62V, L63P, V82I, I93L | B |
| | O000F61OSI | O000F61OSI | KC169380 | None | | | | K14R, R41K, R57RK, L63P, V77I, V82I, I93L | B |
| | O000FA8GTU | O000FA8GTU | KC169392 | None | | | | T12S, L19V, E35D, N37NHRS, R41K, R57K, V82I, I93L | B |
| | D000F_LJYL | D000F_LJYL | KC168235 | None | | | | M36I, R57K, L63T, E65D, I72V, V82I | B |
| | O000M86JTE | O000M86JTE | KC169412 | None | | | | T12S, L19V, R57K, V82I, I93L | B |
| | O000MC6MSW | O000MC6MSW | KC169430 | None | | | | I3V, K14R, R41K, L63P, I72IT, V77I, V82I, I93L | B |
| | O000ME7EKZ | O000ME7EKZ | KC169433 | None | | | | P39S, R41K, Q61E, I62V, L63P, V77I, V82I, I93L | B |
| | V000FCLCDM | V000FCLCDM | KC169634 | None | | | | I15V, E35D, R57K, I62IV, L63P, I64V, V77I, V82I, I93L | B |
| | V000M79HS1 | V000M79HS1 | KC169649 | None | | | | E35ED, N37NS, I64V, K70R, V82I | B |
| | V000M7CCM2 | V000M7CCM2 | KC169650 | None | | | | T12S, E35D, I64V, V82I, I93L | B |
| | V000M84MS4 | V000M84MS4 | KC169651 | None | | | | T12PS, I13IV, L19LEQV, E35D, R57RK, L63LP, V82I | B |
| | V000M89CV7 | V000M89CV7 | KC169654 | None | | | | T12S, E35D, R57K, D60E, L63P, I64V, V77I, V82I, I93L | B |
| | V000M9APSF | V000M9APSF | KC169662 | None | | | | T12S, K20M, E35D, M36I, I64V, K70R, V82I | B |
| | V000MA0SSJ | V000MA0SSJ | KC169666 | None | | | | T12S, K20M, E35D, M36I, L63Q, I64V, K70R, V82I | B |
| | V1B0MA3LUI | V1B0MA3LUI | KC169701 | None | | | | T12TP, M36I, R57K, L63P, A71AT, V82I, I93L | B |
| | VC00M79IK6 | VC00M79IK6 | KC169725 | None | | | | T12S, R41K, I64V, K70R, V82I | B |
| | VE00M55RVD | VE00M55RVD | KC169732 | None | | | | L10I, E35D, I62V, L63P, I64V, V82I, I93L | B |
| | VE00M57EXE | VE00M57EXE | KC169733 | None | | | | L10I, E35D, I62V, L63LPS, I64IV, V82I, I93L | B |
| | D000M82RZI | D000M82RZI | KC168268 | None | | | | I15V, L19I, M36I, R41K, L63D, I64IL, E65ED, I72T, V82I, I93L | B |
| | D000MD4JT2 | D000MD4JT2 | KC168323 | None | | | | I62IV, L63PS, K70KR, I72IATV, V77I, V82I, I93L | B |
| | D000MEBITF | D000MEBITF | KC168336 | None | | | | I15V, L19Q, K20R, M36I, V82I, I93L | B |
| | D000MG2JSO | D000MG2JSO | KC168345 | None | | | | R57K, I62IV, L63P, I64ILM, V82I, I93IL | B |
| | D1H0MG8MJR | D1H0MG8MJR | KC168384 | None | | | L33LF | E35D, M36I, I62V, L63A, A71T, V82I, I93L | B |
| | E000MC2MSQ | E000MC2MSQ | KC168598 | None | | | | N37A, I62V, L63LP, I72IEKV, V77I, V82I, I93L | B |
| | E000MD3NF5 | E000MD3NF5 | KC168612 | None | | | | I15V, N37T, R41K, L63AITV, I72V, V77I, V82I, I93L | B |
| | EC00MG0PSR | EC00MG0PSR | KC168777 | None | | | | T12S, K14R, N37ND, R41RK, R57K, L63P, I72V, V82I | B |
| | EW00M70OWE | EW00M70OWE | KC168836 | None | | | | I15V, L19I, M36I, R41K, L63D, I72T, V82I, I93L | B |
| | J000F89AS9 | J000F89AS9 | KC168903 | None | | | | T12A, M36I, I62V, L63N, I72T, V82I | B |
| | J000M96LTA | J000M96LTA | KC168940 | None | | | | T4P, T12K, Q18H, L19I, E35D, M36I, N37D, D60E, L63P, V82I | B |
| | J000MEMATE | J000MEMATE | KC168980 | None | | | | I62V, L63A, I72M, V77I, V82I | B |
| | J000MF0QRG | J000MF0QRG | KC168982 | None | | | | N37S, R41K, L63S, I72V, V82I | B |
| | J000MG1PUK | J000MG1PUK | KC168986 | None | | | | E35D, L63P, I64L, V82I | B |
| | J180ML7JSQ | J180ML7JSQ | KC169028 | None | | | | E35D, M36I, R57K, I62V, L63P, I64L, A71T, I72M, V82I, I93L | B |
| | J1C0M6DMUU | J1C0M6DMUU | KC169032 | None | | | | I13V, E35D, R41K, I62V, L63P, A71T, V77I, V82I | B |
| Chen (2012) | YN09DH0059 | YN09DH0059 | JQ658528 | None | | | | T12A, L19V, E21Q, E35D, L63P, V82I, I93L | B |
| | YN10DH0007 | YN10DH0007 | JQ658633 | None | | | | T12A, L19V, E21Q, E35D, L63P, V82I, I93L | B |
| da Silveira (2012) | BRMS60 | BRMS60 | JF342310 | None | | | | T12N, L19I, N37T, R41K, I62V, L63S, V82I, I93L | B |
| Delwart (2012) | 476-5760-8 | 476-5760-8 | JN214890 | None | | | | T12P, I15V, L19I, M36I, I62V, L63S, V82I, I93L | B |
| | 479-7416-9 | 479-7416-9 | JN215064 | None | | | | K20R, E35D, R41K, I62V, L63P, K70R, A71AT, V77I, V82I, I93L | B |
| | 479-6279-2 | 479-6279-2 | JN215195 | None | | | | T12A, I15V, E35D, R41K, R57K, L63P, V82I, I93L | B |
| Escobar (2012) | ES18 | ES18 | JX466949 | None | | | | K14R, E35D, N37D, R41K, A71T, V82I | B |
| Gaspareto (2012) | MMFS27 | MMFS27PT | HM752161 | None | | | | I15V, L19I, E35D, R57K, I72V, V82I, I93L | B |
| Karlsson (2012) | SE_205 | SE_205 | JQ698810 | None | | | | I15V, L19IT, E35D, N37S, R41K, Q61E, I62V, V82I, L89M, I93L | B |
| Kijak (2012) | 04TH803686 | 04TH803686 | JN248333 | None | | | | L19Q, N37C, L63C, V77I, V82I | B |
| | 05TH356764 | 05TH356764 | JN248344 | None | | | | L10I, L19I, Q61E, L63P, V77I, V82I, G94Q | B |
| | 05TH356883 | 05TH356883 | JN248345 | None | | | | L10I, L19I, Q61E, L63P, I64V, V77I, V82I, G94Q | B |
| Machado (2012) | CUPL1003 | CUPL1003 | HQ655380 | None | | | | L33V, R41K, L63Q, I64V, V82I | B |
| | CUPL1038 | CUPL1038 | JN000010 | None | | | | R41K, R57K, L63P, V82I, I93L | B |
| | CUPL1106 | CUPL1106 | JX194185 | None | | | | L19Q, E35D, R41K, R57K, L63P, C67Y, V82I, I93L | B |
| | CUPL1157 | CUPL1157 | JX194236 | None | | | | E35D, R41K, R57K, I62V, L63H, V82I, I93L | B |
| Murillo (2012) | 12065 | 12065 | KC412794 | None | | | | T12K, L19Q, P39S, I62V, L63P, K70KR, I72V, V82I, I93L | B |
| | 31024 | 31024 | KC412811 | None | | | | L63P, V77I, V82I, L89M, I93L | B |
| | 31662 | 31662 | KC412842 | None | | | | K14R, I15V, R41K, I62V, L63S, H69Y, I72V, V82I, I93L | B |
| Ragonnet-Cronin (2012) | A05_028 | A05_028 | JX014648 | None | | | | T4P, L63C, V82I | B |
| | B07_085 | B07_085 | JX014887 | None | | | | T12K, L19I, E35D, R41K, L63P, V82I, I93L | B |
| | B07_195 | B07_195 | JX014927 | None | | | | T12S, L19Q, E35ED, N37S, R41K, L63P, V82I, I93L | B |
| | C06_017 | C06_017 | JX014996 | None | | | | I15V, E35D, L63P, V82I | B |
| | F06_035 | F06_035 | JX015077 | None | | | | W6X, L19Q, E35D, N37S, R41K, L63P, V82I, I93L | B |
| Ragonnet-Cronin (2012) | PHAC07_335 | PHAC07_335 | JQ674789 | None | | | | L19Q, E35D, R41K, L63P, V82I, I93L | B |
| | PHAC08_035 | PHAC08_035 | JQ674806 | None | | | | K14R, E35D, M36I, N37D, R57K, I62V, L63S, V82I, I93L | B |
| | PHAC09_112 | PHAC09_112 | JQ674921 | None | | | | E35D, N37D, R57K, L63A, C67S, A71V, V82I, I93L | B |
| | PHAC08_029 | PHAC08_029 | JQ675039 | None | | | | E35D, N37D, D60E, I62V, L63P, I64L, V77I, V82I, I93L | B |
| | PHAC08_168 | PHAC08_168 | JQ675114 | None | | | | T12P, L19Q, E35D, R41K, L63P, V82I, I93L | B |
| | PHAC08_216 | PHAC08_216 | JQ675135 | None | | | | E35D, N37S, I62V, L63P, V77I, V82I, I93L | B |
| | PHAC08_301 | PHAC08_301 | JQ675188 | None | | | | I15V, M36I, I62V, L63C, V82I, I93L | B |
| Yang (2012) | GZ207 | GZ207 | JN848933 | None | | | | E35D, R41K, R57K, D60E, L63P, V77I, V82I, I93L | B |
| | GZ168 | GZ168 | JN848944 | None | | | | R41K, K43R, L63P, V82I, I93L | B |
| Alencar (2013) | PE2-0013 | PE2-0013 | JQ238000 | None | | | | Q2S, I13V, K14E, G16E, L19Q, L63S, I64V, E65D, V77I, V82I | B |
| | RJ2-0068 | RJ2-0068 | JQ238119 | None | | | | R41K, V82I, I93L | B |
| | RJ2-0086 | RJ2-0086 | JQ238195 | None | | | | N37S, Q61D, V82I | B |
| Ferreira (2013) | BR09SP67 | BR09SP67 | HM534050 | None | | | | T12K, I15V, L19I, N37E, R41K, R57K, V82I, I93L | B |
| | BR09SP187 | BR09SP187 | HM534106 | None | | | | T12TA, G16E, E35D, P39S, D60DE, Q61D, L63LI, I72R, V77I, V82I, L89M | B |
| | BR09SP264 | BR09SP264 | HM534128 | None | | | | L19I, K20KR, E35D, N37D, L63A, A71T, V82I, I93L | B |
| | BR09SP300 | BR09SP300 | HM534159 | None | | | | G16E, L19I, E35D, R57K, V77I, V82I, I93L | B |
| | BR09SP253 | BR09SP253 | HM534201 | None | | | | I13V, I15V, N37E, L63I, V82I | B |
| Frentz (2013) | EHR-00112 | EHR-00112 | JX299535 | None | | | | L19I, E35D, V82I, L89M | B |
| | EHR-08053 | EHR-08053 | JX299672 | None | | | | R57K, Q61QLP, L63T, I64L, V82I | B |
| | EHR-09894 | EHR-09894 | JX299693 | None | | | | T12PS, I15V, R41K, R57K, I62V, L63S, I72V, V77I, V82I, I93L | B |
| | EHR-32946 | EHR-32946 | JX300099 | None | | | | L10I, E35D, M36I, R41K, K45R, R57RK, L63S, I64L, V82I, I93L | B |
| | EHR-40262 | EHR-40262 | JX300220 | None | | | | L19Q, L63A, V82I | B |
| | EHR-50538 | EHR-50538 | JX300380 | None | | | | T12A, L19V, E35D, L63P, A71T, V82I, I93L | B |
| | EHR-51743 | EHR-51743 | JX300400 | None | | | | I15V, Q18I, R41K, W42W*, I62V, T74A, V82I, I93L | B |
| | EHR-61472 | EHR-61472 | JX300567 | None | | | | E35D, N37S, R57K, I62V, L63P, V77I, V82I, I93L | B |
| | EHR-66764 | EHR-66764 | JX300663 | None | | | | E35D, I62V, L63PS, H69Q, V82I | B |
| | EHR-74167 | EHR-74167 | JX300804 | None | | | | E34G, R41K, K43R, I62V, L63P, C67H, V77I, V82I, I93L | B |
| | EHR-75155 | EHR-75155 | JX300818 | None | | | | K14R, I15V, L19E, P39S, K45R, L63P, V82I, I93L | B |
| | EHR-78553 | EHR-78553 | JX300892 | None | | | | T12A, L19V, E35D, L63P, A71T, V82I, I93L | B |
| Hawke (2013) | 14043643 | 14043643 | KC237935 | None | | | | E35D, R57K, I62V, L63S, A71V, I72T, V77I, V82I, I93L | B |
| | 1985141 H | 1985141 H | KC238025 | None | | | | E35ED, L63LP, V82I | B |
| | 4533722 H | 4533722 H | KC238160 | None | | | | E35D, N37S, R41K, L63Q, I64V, V82I | B |
| Li (2013) | 2803 | 2803 | JQ901024 | None | | | | T12P, E35D, R41K, D60E, L63P, V82I, I93L | B |