Protease Inhibitors

HOME Genotype-Rx Genotype-Pheno Genotype-Clinical hivdb program

Protease Inhibitors

Subtype	B
Gene	PR
Mutation	V82F
Rx	>= 1 PI
IncludeMixtures	No

References	31
Patients	182
Isolates	221

Sequences matching input query are shown below. Original reference, patient identifier, isolate name, partial treatment histories and accession number are indicated. Complete treatment histories, when available, can be accessed by clicking the isolate name. Sequences may additionally be downloaded in the fasta format, or viewed as individual or composite alignments using the options above. If the user wishes to view individual alignments of isolates for which there are multiple clones, the user can choose to view either an alignment of consensus sequences derived from the clones or an alignment of each clone as well as a consensus sequence.

Author (yr)	Patient	Isolate	Acc#	PIs	Wks	PIMajorDRMs	PIMinorDRMs	OtherMut	Subtype
Condra (1996)	pt-U	ptUW52		IDV	52	I54V, V82F, L90M		L10I, K14R, E35D, M36V, N37D, L63P, I64V, A71T, I93L	B
	pt-P	ptPW12		IDV	12	V82F		L10I, T12S, I13V, I64V	B
		ptPW48		IDV	48	M46I, V82F, I84V	L33I	L10I, T12S, I13V, M36I, I64V, L89M	B
	pt-K	ptKW18		IDV	18	M46I, V82F	L24I	N37S, I64V, E65I, I93L	B
		ptKW60		IDV	60	M46I, I54V, V82F, L90M	Q58E	L10I, L63P, I64V, V77I, I93L	B
	pt-J	ptJW24		IDV	24	I54V, V82F	L33I	L10I, Q18E, K20R, E35D, M36I, N37S, L63P, L89M, I93L	B
		ptJW32		IDV	32	I54V, V82F	L33I	L10I, Q18E, K20R, E35D, M36I, N37S, D60E, L63P, L89M, I93L	B
		ptJW36		IDV	36	I54V, V82F, L90M	L33I	L10I, Q18E, K20R, E35D, M36I, N37S, L63P, L89M, I93L	B
Molla (1996)	RTV-114	RTV114W30		RTV	30	V82F	L33F	I13V, K14R, E35D, M36L, N37D, D60E	B
	RTV-201	RTV201W32		RTV	32	I54V, V82F		L63P, A71V, V77I	B
	RTV-223	RTV223W32		RTV	32	M46I, V82F, L90M		L63P, V77I, I93L	B
	RTV-231	RTV231W32		RTV	32	V82F		I64V	B
	RTV-313	RTV313W56		RTV	56	V82F		L10V, G16E, L63A, V77I	B
Deeks (1999)	SD-16	SD-16	AF124552	RTV	52	V82F	V11I	L10I, I13V, G16E, E35D, N37S, L63T, I64V, C67Y, V77I	B
Zolopa (1999)	CA605	CA3174	AF085127	IDV	61	M46I, I54IV, V82F, L90M		L10I, L63P, I93L	B
Bacheler (2000)	LB4-P101	P101-72		IDV	52	M46I, V82F	L24I	L10I, M36I, I62V, L63T, I93L	B
	LB4-P140	P140-64		IDV	16	V82F		I13V, I15V, R41K, I64V, K70R	B
Balotta (2000)	CB-266	CB-266	AF252033	IDV, SQV, RTV		I54V, V82F, L90M		L10I, K14LS, E35D, M36I, I62V, L63P, I64V, H69K, A71V	B
Baxter (2000)	GART-G29	GART-29		PI, IDV	NA	I54V, V82F		L10I, E35D, M36MI, N37D, D60E, Q61E, L63P, I93L	B
	GART-NG71	GART-71		PI, IDV	NA	M46I, V82F		L10I, I13V, I15V, M36I, N37S, R41K, L63T, I72T, I93L	B
Belec (2000)	par10	par10_m12	AF204312	IDV	52	M46I, L76V, V82F, L90M		L10I, N37D, L63P, I64V, I93L	B
Parkin (2000)	SD-16	SD-16_4	AF294559	RTV, SQV, NFV	56	V82F	V11I	L10I, I13V, G16E, E35D, N37S, L63T, I64V, C67Y, V77I	B
Gonzales (2001)	CA798	CA1440	AY030428	SQV, IDV	96	I54V, V82F, L90M	G73C	L10I, I15V, K20I, E35D, M36I, R57K, Q61N, I62V, L63C, T74S	B
	CA1147	CA2607	AY030458	SQV, IDV	78	M46I, V82F, L90M	G73S	L19I, I62V, L63P, V77I, I93L	B
	CA3871	CA9643	AY030878	SQV, IDV	158	I54A, V82F		L10I, I13V, K14R, I15V, K20M, M36V, N37T, I62V, I64V, A71V, L89I	B
	CA3935	CA9708	AY030934	SQV, RTV, IDV	157	I54V, V82F, L90M	G73S	L10I, A22AV, L63P, A71V, V77I, I93L	B
	CA4104	CA9815	AY031095	IDV	165	I54V, V82F, L90M		L10I, R41K, M46X, Q61H, L63P, I64V, K70R, V77I, I93L	B
	CA4345	CA10753	AY031208	IDV, NFV, SQV, RTV	148	M46I, G48Q, I54T, V82F, L90M	K43T	L10I, E35D, M36I, N37D, I62V, L63T, I72V, V77I, L89M, I93L	B
	CA4375	CA10788	AY031233	IDV, SQV, NFV	175	M46I, I54V, V82F, I84V, L90M	K43T	L10I, E35DN, M36I, F53Y, I62V, L63Q, I64V, A71V, I93L	B
	CA4749	CA11781	AY031410	IDV	144	M46I, I54V, V82F, L90M		L10I, L19I, L63P, I64V, I93L	B
	CA4797	CA11845	AY031456	IDV	173	M46I, I54V, V82F		L5LF, L10I, L19Q, K20T, D25DV, K43KN, I64V, A71V, V77I, I85V, I93L	B
	CA5195	CA13203	AY031758	SQV, RTV, NFV	196	I54V, V82F	K43T	L10I, I13V, I15IV, E35D, M36I, N37S, D60E, I62V, L63T, I64V, I72V, V77I	B
	CA5197	CA12776	AY031760	PI	NA	M46I, I54V, V82F, L90M		L10I, I13V, N37D, L38LF, Q61E, I62V, L63P, I64V, T74S, V77I, I93L	B
	CA5391	CA13282	AY031946	IDV, NFV	174	M46I, V82F, L90M	Q58QE	I13V, I15V, K20MR, E35D, M36I, R41K, I62V, L63P, K70KR, T74T*KS, I93L	B
	CA5423	CA13319	AY031975	SQV, RTV	188	M46I, V82F, L90LM	F53FL	T4TN, K14KR, I15IV, R41K, D60E, L63P, V75VI	B
Kempf (2001)	DK-125	DK-125		IDV, NFV	172	M46I, I54V, V82F, L90M	Q58E	L10I, D60DE, I62IV, L63LP, I64V, I72IM, V77I, I93L	B
	DK-1704	DK-1704		IDV	67	M46MI, V82F		E35D, M36I, N37D, R41K, R57K, L63P, V77I, I93L	B
Parkin (2001)	NP-D16	NP-D16		Unknown, IDV, SQV, NFV	NA	V82F		L10I, L63T, V77I	B
Servais (2001)	JS10	JS98318	AJ401947	RTV, IDV	96	M46L, I54V, V82F		L10I, K14R, I62V, L63S, C67D, H69K, A71V, V77I, I93L	B
	JS11	JS98491	AJ401963	IDV	108	I54V, V82F		L10I, K14R, I62V, L63S, C67D, H69K, A71V, V77I, I93L	B
		JS99289	AJ401975	IDV	144	M46I, I54V, V82F	Q58E	L10I, I13V, K20R, E35D, M36I, G49V, R57K, Y59E, L63P, H69K, L89M	B
Kantor (2002)	CA1138	CA3736	AY047404	SQV, IDV, RTV	101	V82F		K14R, L19Q, E35D, N37T, L63P, A71T	B
	CA5195	CA17528	AY047475	SQV, RTV, NFV	238	M46ML, G48EV, I54V, V82F, L90LM	K43T	W6W*, L10I, I13V, I15V, E35D, M36I, N37S, I62V, L63T, I64V, I72V, V77VI	B
Margot (2002)	MM-242436677	2424366771		PI	NA	M46I, I54A, V82F		L10I, E35D, N37T, I62V, L63P, A71V, V77I	B
	MM-287736669	2877366691		PI	NA	I54L, V82F	Q58E	L10I, R41K, L63T, E65D, I72V, V77I	B
Masquelier (2002)	apv11	apv11M4	AY133509	RTV	16	V82F		N37E, R57K, L63P, I93L	B
Tural (2002)	140180	140180		IDV, RTV	206	I54A, V82F, L90M	L33F	L10I, I13V, I15V, M36L, L63A, A71V, I93L	B
	880423	880423		IDV, NFV, SQV	120	M46I, I54V, V82F, L90M	L23I	L10I, E35D, N37D, R41K, F53Y, L63P, A71T, I72V, V77I, Q92R, I93L	B
Monno (2003)	ML_Pat87	ML_Pat87		PI	NA	M46I, I54A, V82F, L90M	Q58E	L10I, I13V, N37NTD, D60DE, Q61N, L63P, A71V, V77I, I93L	B
Wu (2003)	CA798	CA35544	AY798445	SQV, IDV	123	I54V, V82F, L90M	G73C	L10I, I15V, K20I, E35D, M36I, R57K, Q61N, I62IV, L63C, T74S	B
		CA13183	AF544420	SQV, IDV, RTV	146	I54V, V82F, L90M	G73C	L10I, I13IV, I15V, K20I, E35D, M36I, R57K, Q61N, I62V, L63C, T74S	B
	CA3871	CA11039	AF544533	SQV, IDV	177	I54A, V82F		L10I, I13V, K14R, I15V, K20M, M36V, N37T, I62V, I64V, A71V, L89I	B
	CA3935	CA12610	AF544539	SQV, RTV, IDV	184	I54V, V82F, L90M	G73S	L10I, L63P, A71V, V77I, I93L	B
	CA5195	CA21312	AF544582	SQV, RTV, NFV	265	M46L, G48EV, V82F, L90LM	K43T	L10I, I13V, I15V, E34EK, E35D, M36I, N37S, I54X, D60DE, I62V, L63T, I64V, I72V, V77VI	B
Gomez-Carrillo (2004)	90246	90246	AY365470	PI	NA	M46L, V82F, L90M	L33LF	L10I, N37S, R41K, L63P, I72V, V77I, I93L	B
	95823	95823	AY365513	PI	NA	I54V, V82F	K43T	Q7QH, L10I, T12TP, I15V, L19I, N37NH, H69Y, L90LV, I93L	B
	96533	96533	AY365533	PI	NA	M46L, I54V, V82F	K43T, G48E, F53L, L89V	Q7QH, L10I, I13V, I15V, K20T, M36I, L63P, H69Q, T74S, I93L	B
	97746	97746	AY365556	PI	NA	M46L, V82F, I84V		L10I, N37A, R41K, L63P, I72T, I93L	B
	97832	97832	AY365559	PI	NA	G48S, I54V, V82F, L90M		L10I, L19I, M36V, P39T, R57K, I62V, L63P, A71T, I93L	B
	98421	98421	AY365577	PI	NA	V82F		I13V, L63P, I64V, A71AV, V77I, P79A, I93L	B
	100501	100501	AY365612	PI	NA	M46I, V82F, L90M		L10I, I13V, N37D, K45Q, I62V, L63P, A71T, I72E, V77I, I93L	B
	101041	101041	AY365624	PI	NA	V82F, L90M	G73S	K20I, L63P, H69R, A71V, I72V	B
	105783	105783	AY365736	PI	NA	M46ML, I54V, V82F, L90M		L10I, K20I, E35N, M36I, N37D, R41K, D60E, L63P, A71V, I85V, I93L	B
	107857	107857	AY365776	PI	NA	I54V, V82F, L90M		L10I, T12N, G16E, L19I, K20I, M36I, P39S, D60E, I62V, I64V, A71V, I72R	B
	108153	108153	AY365781	PI	NA	I54V, V82F, L90M		E35D, M36V, N37D, I62V, L63P, A71V, V77I, I93L	B
	108821	108821	AY365797	PI	NA	V82F		I15IV, G16A, I62V, L63P, I72IK, V77I, I93L	B
Mo (2005)	DK-125	6376_d427		IDV, NFV, LPV	233	M46I, I54V, V82F, L90M	Q58E, G73C	L10I, G52GS, D60DE, L63P, I64IV, V77I, I93L	B
		6376_d508		IDV, NFV, LPV	244	M46I, I54V, V82F, L90M	Q58E, G73C	L10I, D60DE, L63P, I64IV, H69HR, V77I, I93L	B
Rhee (2005)	CA620	CA20444	AY796440	SQV, IDV, Unknown	>96	M46I, I54V, V82F, L90M	Q58E	L10I, N37S, R41RK, L63P, I64V, I72V, V77I, I93L	B
		CA23825	AY796441	SQV, IDV, Unknown	>96	M46I, I54V, V82F, L90M	Q58E	L10I, E35D, N37ST, R41RK, I62IV, L63P, I64V, I72V, V77I, I93L	B
	CA798	CA9536	AY796479	SQV, IDV	131	V82F, L90M	G73C	L10I, I15V, G16E, K20I, E35D, M36I, R57K, Q61N, I62V, L63C, C67Y, T74S	B
	CA1147	CA20331	AY796520	SQV, IDV, RTV	234	M46I, V82F, L90M	G73S	L10I, L19I, I62V, L63P, A71AV, I72M, V77I, I93L	B
		CA41272	AY796521	SQV, IDV, RTV, LPV	327	M46I, V82F, L90M	G73S	L10I, L19I, I62V, L63P, I72M, V77I, I93L	B
	CA2098	CA24458	AY798420	IDV	301	M46I, I54V, V82F, L90M		I13V, E35ED, L63P, A71V, I72V, I93L	B
	CA3935	CA38110	AY796953	SQV, RTV, IDV, NFV, APV, LPV	358	I54V, V82F, L90M	G73S	L10I, L63P, A71V, V77I, I93L	B
		CA38112	AY796954	SQV, RTV, IDV, NFV, APV, LPV	385	M46I, I54V, V82F, L90M		L10I, P39T, L63P, H69Y, A71V, V77I, I93L	B
	CA4078	CA33285	AY797011	NFV, SQV, RTV, IDV, LPV	247	M46I, I54V, L76V, V82F	F53L	L10I, K20R, E35D, M36I, N37D, D60E, I62V, L63P, H69QR, A71V, I93L	B
	CA4345	CA17500	AY797059	IDV, NFV, SQV, RTV	212	M46I, G48Q, I54T, V82F, L90M	K43T	R8RQ, L10I, K20R, E35D, M36I, N37D, R41RK, I62V, L63T, I64M, I72V, V77I, L89M, I93L	B
		CA23508	AY797060	IDV, NFV, SQV, RTV, LPV	277	M46I, G48Q, I54T, V82F, L90M	L33F, K43T	L10I, K20R, E35D, M36I, N37D, R41K, Q61QE, I62V, L63T, I72V, V77I, L89I, I93L	B
	CA4375	CA20523	AY797068	IDV, SQV, NFV	175	M46I, I54V, V82F, I84IV, L90M	K43T	L10I, E35D, M36I, R41RK, F53SY, I62V, L63Q, I64V, G68GA, A71AV, I93IL, C95CS	B
	SWC-3395	P3395-1201		IDV, SQV, RTV, NFV	92	M46I, I54V, V82F, L90M		L10I, L19I, E35D, N37D, L63P, V77I	B
		P3395-1753		IDV, SQV, RTV, NFV	125	M46I, I54V, V82F, L90M		L5X, L10I, L19I, E35D, N37D, L63P, I64V, V77I, I93L	B
		3395-2365		IDV, SQV, RTV, NFV	160	M46I, I54IV, V82F, L90M		L10LI, L19I, E35D, N37D, L63P, I64IV, A71AT, V77I, I93L	B
		3395-3931		IDV, SQV, RTV, NFV	246	M46I, I54V, V82F, L90M		L10I, L19I, E35D, M36MI, N37D, L63P, I64V, V77I, I93L	B
	CA4797	CA24149	AY797162	IDV	266	M46I, I54V, V82F, L90M		L19Q, K20I, I64V, A71V, V77I, I85V, I93L	B
		CA24151	AY797163	IDV	277	M46I, I54V, V82F, L90M		L10I, L19Q, K20I, L63LP, I64V, A71V, V77I, I85V, I93L	B
		CA34242	AY797164	IDV, SQV, RTV	350	M46L, I54V, V82F, L90M	G48GE, I84IL	L10I, L19Q, K20I, F53FY, K55KT, L63P, I64V, H69HR, A71V, I72T, V77I, I85V, I93L	B
		CA41318	AY797165	IDV, SQV, RTV, LPV	397	M46I, I54V, V82F, L90M		L10I, L19Q, K20I, M36MI, I64V, A71V, V77I, I85V, I93L	B
		CA42691	AY797166	IDV, SQV, RTV, LPV	413	M46I, I54V, V82F, L90M		L10I, L19Q, K20I, M36MI, I64V, A71V, V77I, I85V, I93L	B
	CA5391	CA33286	AY797315	IDV, NFV, LPV	271	M46I, V82F, L90M		I13IV, I15V, K20M, E35D, M36V, R41K, I62V, L63P, T74S, I93L	B
	CA5975	CA14891	AY032222	NFV, IDV, APV	151	I54V, V82F		L10I, N37T, R41K, D60E, I62V, L63P, I64V, I93L	B
	CA6602	CA38092	AY797436	Unknown, APV, LPV	>86	M46I, I54V, V82F, L90M	L33F, K43T, G73A	L10I, K20R, E35D, M36I, R57K, Q61E, I62V, L63P, I64V, I93L	B
		CA42705	AY797437	Unknown, APV, LPV	>141	M46I, I54V, V82F, L90M	L33F, K43T, G73A	L10I, K20R, E35D, M36I, R57K, Q61E, I62V, L63P, I64V, I72IT, I93L	B
	CA7963	CA20433	AY797614	RTV, IDV, SQV, NFV	242	M46I, V82F, L90M	K43T	R8R*, L63A, A71T, V77I	B
	CA8037	CA20556	AY797665	IDV, NFV	258	I54V, V82F, L90M		L5LV, L10I, N37NS, D60DE, Q61QH, L63Q, I64IV, H69HY, A71V, I72V, V77I, I93L	B
		CA48179	AY797666	IDV, NFV	437	I54V, V82F, L90M		L10I, N37NS, D60E, I62V, L63Q, I64V, H69Y, A71V, I72V, V77I, I93L	B
	CA9792	CA34173	AY797858	LPV	79	M46I, V82F, I84C		L10V, I13V, K20T, R41K, L63P, I64V	B
Baxter (2006)	12-1024	1024-30513	DQ876266	PI, RTV, TPV	>8	M46I, L76LV, V82F, L90LM	L33F, Q58E	L10V, I13V, E35D, M36I, R57K, I62V, L63S, L89M	B
	12-1417	1417-30729	DQ876013	PI	NA	M46I, I54V, V82F, L90M	Q58E	L10I, R57K, L63P, I64V, V77I, I93L	B
	12-1474	1474-30512	DQ876037	PI	NA	M46I, I54V, V82F, L90M	L33F, G73A	L10I, N37S, R41K, K55R, D60E, Q61QH, L63P, I64V, I72L, V77I, I93L	B
	12-1767	1767-30522	DQ876073	PI	NA	M46I, V82F, I84V, L90M	V11I, Q58E, G73C	L10I, I15V, K20I, E35D, M36I, F53Y, I62V, L63P, H69Q, A71I, I72L, Q92QK, I93M	B
	12-3065	3065-30331	DQ876110	PI	NA	M46I, G48S, I54V, V82F, L90M		L10I, I13V, K20I, E35D, M36I, N37D, R41K, K45V, F53Y, D60E, I62V, I64V	B
	12-4032	4032-30225	DQ876145	PI	NA	M46I, I47V, I54V, V82F, L90M	F53L	L10I, N37S, A71V, V77I, I93L	B
	12-1003	1003-30303	DQ876195	PI	NA	M46I, V82F, I84V, L90M	Q58E	L10I, I13V, I15V, K20I, D25DH, E35D, M36I, N37D, L63P, L89I	B
	12-2009	2009-30606	DQ876241	PI	NA	V32I, I47V, I54L, V82F, L90M	L33F, K43T	L10I, V11F, I13V, K20R, E35D, M36I, N37D, D60E, I62V, L63PT, A71I, V77I, I93L	B
	12-2237	2237-30715	DQ876249	PI	NA	M46I, I54V, L76V, V82F, L90M	L23I, L33F, K43T	L10I, I13V, E35D, M36I, N37NS, I62V, L63P, I64V, A71AV, I93L	B
	12-1019	1019-30317	DQ876260	PI	NA	M46I, V82F, L90LM	L33F, Q58E	L10V, I13V, E35D, M36I, R57K, I62V, L63PS, L89M	B
	12-1808	1808-30730	DQ876298	PI	NA	M46L, G48Q, I54A, V82F, L90M	F53L	L10I, R41K, D60E, I62V, L63P, I64V, A71V, T74TS, V77I, I93L	B
	12-2153	2153-30707	DQ876319	PI	NA	M46I, I54V, V82F, I84V	L33LF	L10I, R41K, L63P, A71AV, V77I, I93L	B
	12-1655	1655-30528	DQ876384	PI	NA	M46L, I54V, V82F, L90M	G48E, F53FL	L10I, G17E, K20T, M36MI, I62V, L63P, A71V, V77I, I85V, I93L	B
	12-2081	2081-30617	DQ876585	PI	NA	M46I, I54M, L76V, V82F		W6E, L10I, R41K, D60E, I62V, L63P, A71V, V77I, I93L	B
	12-2324	2324-30724	DQ876632	PI	NA	M46I, I54V, V82F, I84V, L90M	Q58E	L10I, L19IT, K20R, E35D, M36I, K55R, D60E, I62IV, L63P	B
	12-2017	2017-30701	DQ876696	PI	NA	M46L, I54V, V82F	G48E, F53L	L10I, E35D, M36V, N37H, R41N, L63C, I64V, V77I, I93L	B
	12-1117	1117-30310	DQ876773	PI	NA	G48M, I54S, V82F	L33F, Q58E	L10V, I13V, K20Q, M36I, I62V, L63P, A71V, V77I, I93L	B
	12-1890	1890-30603	DQ876792	PI	NA	M46I, I54IV, L76V, V82F		L10I, R41K, L63P	B
	12-1497	1497-30620	DQ876892	PI	NA	I54V, V82F, L90M	F53L	L10I, V11L, I13V, I15V, K20V, E35D, M36I, N37ND, R41K, D60E, I62V, L63P, I64V, A71V	B
	12-1907	1907-30630	DQ876939	PI	NA	M46MI, I54V, V82F, L90M	L23LI, L33LF, F53FL, G73GC	L10I, I13V, D60E, Q61G, I62IV, L63P, K70R, A71AV, V77I, I85IL, I93L	B
	12-1188	1188-30421	DQ876974	PI	NA	M46I, I54V, V82F		L10I, I13V, I15V, R41K, Y59S, L63T, I72V, V77I, I93L	B
	12-1958	1958-30606	DQ876990	PI	NA	I54V, L76V, V82F	L23I, L33I, Q58E	L10I, Q18E, K20KR, E34D, E35D, M36I, N37C, I62V, L63P, H69R, L89M	B
	12-1240	1240-30519	DQ877023	PI	NA	M46L, I54L, V82F, L90M	L33F, Q58E	L10I, K20R, E34EA, E35D, M36I, N37D, D60E, Q61D, L63P, C67E, A71V, I85IV, I93L	B
	12-2462	2462-30819	DQ877042	PI	NA	M46I, I54L, V82F	Q58E	L10I, I13V, N37C, K43R, I62V, L63P, I64V, I93L	B
	12-1553	1553-30625	DQ877057	PI	NA	M46I, I54V, V82F, L90M	L23LI, L33F, G73S	L10I, T12P, I15V, L19S, E35D, M36L, R41K, I62V, L63P, I93L	B
	12-1568	1568-30306	DQ877068	PI	NA	M46I, I47V, I54V, V82F		L10I, P39S, R57K, I62V, L63P, I64V, I72V, V77I, I85V	B
	12-2012	2012-30612	DQ877077	PI	NA	M46I, I54V, V82F, I84V, L90M	V11I, G73S, L89V	L10I, I15V, Q18H, K20I, E35D, M36I, N37D, I62V, L63P, A71V, I72M, P79A, I85V	B
	12-2045	2045-30702	DQ877124	PI	NA	M46I, I54V, V82F, I84V		L10I, T12S, I13V, K20M, M36I, L63P, I64V	B
		2045-40505	DQ879120	PI, RTV, TPV	>44	M46I, I54V, V82F, I84V		L10I, T12S, I13V, K20M, M36I, L63P, I64V	B
	12-3147	3147-30506	DQ877157	PI	NA	M46I, I54A, V82F, L90M		L10I, N37K, R41N, I62V, L63P, I64V, A71V, V77I, I93L	B
	12-3067	3067-30402	DQ877206	PI	NA	M46I, L76V, V82F, L90M	L23I, L33F, Q58E	I13V, E35D, M36I, N37D, I62V, L63Q, I64V	B
	48-1817	1817-30924	DQ877438	PI	NA	I54V, V82F, I84V, L90M	Q58E, G73S, L89V	L10I, I13IV, I15V, L19V, K20M, M36L, L38W, I62V, L63P, A71V, I72IM	B
	48-1205	1205-30506	DQ877749	PI	NA	M46I, I54IV, V82F, L90M	F53FL, G73T	L10I, Q18H, L19I, K20R, E35D, M36I, N37E, D60E, Q61E, I62V, L63P, A71T, I72T	B
	48-2001	2001-30416	DQ877836	PI	NA	I54V, V82F, L90M	Q58E	L10I, I13IV, K20R, E35D, M36I, I62V, L63P, I64V, A71V, V77VI, I93L, C95L	B
	48-2611	2611-30513	DQ877902	PI	NA	M46I, I54A, V82F, L90M	L33I	L10I, K14R, E35D, M36I, N37D, R41K, L63P, H69HY, A71V, I93L	B
	48-3015	3015-30401	DQ877925	PI	NA	M46I, I54V, V82F, L90M	L33LF, Q58E, G73T	L10I, I62V, L63P, A71T, I72T, V77I, I93L	B
	48-3022	3022-30313	DQ877932	PI	NA	I54A, V82F, L90M	L33LF	L10I, L19I, E34Q, N37D, D60E, I62IV, L63P, I64LV, A71V, V77I, Q92K, I93M	B
	48-3037	3037-30307	DQ877948	PI	NA	M46I, I47V, I54V, L76V, V82F	L23LIM, K43KT, G48GE, F53L	L10I, I15V, G16E, L19LQ, K20M, N37D, D60E, A71V, I72R, I93L	B
	48-3121	3121-30514	DQ878029	PI	NA	I54L, V82F, L90M	L33F, K43T, F53L, T74P	L10I, I13V, I15IV, K20R, E35D, M36I, N37E, D60E, I62IV, L63PT, I64V, C67Y	B
	48-3128	3128-30415	DQ878036	PI	NA	M46MI, I54V, V82F, L90M	F53FL	L10V, K20R, E35D, M36V, N37E, R57K, I62V, L63P, A71I, V77I, I93L	B
	48-3172	3172-30416	DQ878081	PI	NA	M46MI, I54V, L76V, V82F, I84V	L33F	L10I, I13V, R57RK, I62IV, L63P, I64V, A71V, V77I	B
	48-3175	3175-30422	DQ878084	PI	NA	M46L, I54V, V82F, L90M	V11I, L23I, L33F, F53L	L10I, I13V, K43S, I62V, L63P, A71V, I72V, T74A, V77I, I93L	B
	48-3203	3203-30528	DQ878113	PI	NA	M46I, I47V, I54V, V82F, L90M	V11I, L33F, G73T, L89V	L10I, T12P, K14R, N37D, R57K, I62V, L63P, A71V, V77I, I85V, I93L	B
	48-3213	3213-30526	DQ878123	PI	NA	M46I, V82F, I84V		L10I, E35D, L63P, V77I	B
	48-3236	3236-30526	DQ878143	PI	NA	I54LV, V82F, L90M	L33F, Q58E	L10V, I13V, I15V, G16E, K20R, E35D, M36I, R41RK, K55Q, I62V, L63C, I64V, V77VI, I93L	B
	48-3251	3251-30630	DQ878155	PI	NA	V82F, I84V	F53L	L10I, T12P, I13IV, K20KM, N37NHRS, K45I, I62V, L63P, I64V, A71V, I72V, V77I, P79A, Q92K	B
	48-3261	3261-30728	DQ878165	PI	NA	I54V, V82F	K43T, T74P	L10I, I13V, I15V, L19I, K20T, E35N, M36I, N37S, I62V, L63V, I64V	B
	48-3274	3274-30729	DQ878179	PI	NA	M46I, I47V, I54V, V82F, L90M	F53L	L10I, I13V, K20I, E35N, M36I, N37S, R41E, D60E, L63P, I64V, A71V, V77I, I93L	B
	48-3279	3279-30911	DQ878186	PI	NA	M46L, I54V, V82F	L33LF, Q58E	L10I, E35D, N37S, R57K, D60T, L63P, A71V, V77I, I93L	B
	48-3286	3286-30707	DQ878192	PI	NA	M46I, I54V, L76V, V82F, L90M	L23I, F53L, Q58E	L10I, K14R, I15V, I62V, L63P, A71V, I93L	B
	48-3294	3294-30729	DQ878199	PI	NA	M46L, I54V, L76V, V82F, L90M	L23I, L33F, Q58E	L10I, I13V, K14KR, D60DN, Q61QH, L63P, C67DE, A71AV, V77I, L89M, I93L	B
	48-4035	4035-30218	DQ878269	PI	NA	M46I, I54V, L76V, V82F	L33F, Q58E	L10I, E35D, M36L, I62V, L63P, I64V, A71V, V77I, I93L	B
	48-4072	4072-30218	DQ878301	PI	NA	D30N, M46I, I54L, V82F, L90M	L33I, Q58E, N88D	L10IV, I13A, K20R, A22V, E35D, M36I, N37E, R57K, D60N, Q61E, L63P, I64V, A71V, I72M, V75I, I93L	B
	48-4078	4078-30225	DQ878307	PI	NA	M46L, I54L, V82F, I84V, L90M	L23I, L33F	L10V, I13V, L19V, E35D, M36L, N37D, F53FY, Q61QE, I62V, T74E, L89M	B
	48-4088	4088-30306	DQ878318	PI	NA	M46I, I54V, V82F, L90M	L33F, G73C, L89V	L10I, L19LI, D60E, I62V, L63P, A71T, I72T, I93L	B
	48-4103	4103-30224	DQ878333	PI	NA	M46I, I47IV, I54V, V82F, L90M	Q58E, G73C	L10I, T12Q, I13M, K14R, K20I, E35ED, M36I, R41K, D60E, Q61N, I62V, L63P, I64V, I66IV, K70R, I72V, V77I	B
	48-4169	4169-30409	DQ878403	PI	NA	I54V, L76V, V82F, L90M	L33F	L10I, I13V, K14R, M36I, I62V, L63P, I64V, A71V, I93L	B
	48-4256	4256-30715	DQ878488	PI	NA	M46I, I54V, V82F, L90M	L23I, F53FL, Q58E	L10I, K20R, E35D, M36I, K55R, R57RK, I62V, L63P, I64IL, I66V, H69HR, A71T, I72V, V77I, I93L, C95F	B
	48-4263	4263-30605	DQ878495	PI	NA	M46I, I54V, V82F, I84V, L90M	L33F, F53L	L10I, V11VL, I13IV, D60E, L63P, A71V, I72T, V77VI, I93L	B
	48-5076	5076-30807	DQ878586	PI	NA	M46I, I54V, V82F, L90M	G73C	L10I, I13M, K20I, E35G, M36I, D60E, I62V, L63P, I64V, I72L, V77VI, I93L	B
	48-6026	6026-30409	DQ878625	PI	NA	M46L, G48GMRV, I54V, V82F, L90M	L23LI, Q58E	L10I, I62V, L63P, I64L, A71T, I72V, V77I, I93L	B
	48-6028	6028-30409	DQ878627	PI	NA	I54V, V82F, L90M	V11VI, L33LF, F53L	L10V, I13IV, R41K, K45V, I62V, L63P, H69K, A71V, I72V, T74A, V77I	B
	48-6031	6031-30414	DQ878630	PI	NA	M46L, V82F, I84V, L90M	K43T	L10I, K20KR, E35D, M36I, R57K, I62V, L63LP, I64V, A71V, I85V, I93L	B
	48-6047	6047-30515	DQ878646	PI	NA	M46L, I54V, V82F, L90M	L33I, Q58E, G73S, L89V	L10I, I13V, E35D, M36I, Q61QE, I62V, L63PT, C67Y, A71AT, I72IT	B
	48-6071	6071-30604	DQ878669	PI	NA	M46I, L76V, V82F, L90M	L23I, L33F	L10I, T12K, I13V, K14KR, I62V, L63P, T74A, V77I, L89M	B
	48-6086	6086-30528	DQ878681	PI	NA	I54V, L76V, V82F, L90M	G73GS, L89V	L10I, I13V, L19V, K20I, M36I, D60E, Q61N, I62V, L63Q, I64M, A71V	B
	48-6088	6088-30603	DQ878683	PI	NA	M46I, I54V, L76V, V82F, I84V, L90M	L23I, L33F, G48E, Q58E	L10I, I13V, E34K, N37T, I62V, L63P, V77I, L89M	B
	48-6132	6132-30624	DQ878714	PI	NA	I54V, V82F	L33F, F53L	L10V, T12I, I13V, I15V, Q18E, M36L, K45V, I62V, L63P, I72V	B
	48-6226	6226-30730	DQ878793	PI	NA	M46L, I54V, L76V, V82F, L90M	L23I	L10I, I15V, D60E, I62V, L63P, A71V, I93L	B
	48-6252	6252-30730	DQ878812	PI	NA	M46I, I47V, I54A, V82F, L90M		L10I, K20R, E35D, M36I, N37D, L63P, I64V, A71V, I72V, I93L	B
	48-6265	6265-30806	DQ878822	PI	NA	I54V, V82F	L33F, Q58E	L10IV, E35D, M36I, N37S, R41K, R57K, Q61E, I62V, L63P, L89M	B
	48-6345	6345-30918	DQ878868	PI	NA	M46I, L76LV, V82F, I84V, L90LM	Q58E	L10V, G16A, F53Y, Q61D, L63S, H69K, V77I	B
	48-7005	7005-30925	DQ878893	PI	NA	M46I, V82F, L90M	Q58E	L19Q, L63P, I64V, V77I	B
	48-7015	7015-30715	DQ878897	PI	NA	M46L, I54V, V82F		L10V, K14R, I15V, E35D, M36V, N37T, R57K, D60E, Q61E, I62V, L63P, I93L	B
	48-7023	7023-30915	DQ878908	PI	NA	I54V, V82F, L90M	F53L, Q58E	L10I, K20R, E35D, M36V, N37E, I62V, L63P, I64V, A71V, T74S, V77I, I85V, I93L	B
		7023-40109	DQ878907	PI, RTV, TPV	>17	I54V, V82F, L90M	F53L, Q58E	L10I, K20R, E35D, M36V, N37E, I62V, L63P, I64V, A71V, T74S, V77I, I85V, I93L	B
	48-7087	7087-30612	DQ878941	PI	NA	M46I, I54V, V82F, I84V, L90M	Q58E	L10I, K20R, E35D, M36I, R41RK, K55R, L63P, A71V, I93L	B
	48-7092	7092-30930	DQ878946	PI	NA	M46I, I47V, I54T, V82F, L90M	L33LF, K43T	L10I, R41K, I62V, L63P, I64IL, A71L, V77I, I85V, L89F, I93L	B
	48-7099	7099-30714	DQ878952	PI	NA	M46L, I50V, I54V, V82F, L90M	L10F, V11I, L33F, G73S, I84L, L89V	T4P, I13V, K14R, E35D, M36L, N37S, I62V, L63P, H69Q, K70T, A71V, I93L	B
	48-7121	7121-30610	DQ878964	PI	NA	M46I, I54V, V82F, L90M	L33LF, G73C	L10I, E35D, N37D, I62V, L63P, A71T, I72E, I93L	B
	48-9212	9212-30929	DQ877492	PI	NA	M46I, I54V, L76V, V82F, L90M	L33I, Q58E	L10I, E35D, M36I, N37D, I62V, L63V, I64V, A71V, I93L	B
	48-9028	9028-30825	DQ877497	PI	NA	M46I, I47V, I54V, V82F	Q58E	L10I, K20I, E35N, M36I, N37D, I62V, L63T, I72T, V77I, I85V, L89M	B
	48-9275	9275-30923	DQ877526	PI	NA	I54V, V82F, I84V, L90M	Q58E	L10I, K20R, E35D, M36I, I62V, L63P, A71V, I72V, I85V, I93L	B
	48-9239	9239-30915	DQ877542	PI	NA	M46I, V82F, I84V, L90M	L23LI, L33F, F53L, Q58E, G73GCS	L10I, T12N, E21EV, E34Q, N37S, R41K, D60DE, I62V, L63P, A71AV, V77I	B
	48-9242	9242-30922	DQ877546	PI	NA	M46I, I50V, I54V, V82F, L90M	L89V	L10I, T12K, I15V, L19I, K20I, M36I, R41K, L63LP, A71I, I85V, I93L	B
	48-9172	9172-30904	DQ877557	PI	NA	M46I, G48Q, I54S, V82F, L90M	K43T, F53L	L10I, K20R, E35D, M36IV, N37S, R41RK, D60E, Q61E, I62V, L63P, H69HY, A71V, I72V, V77I, I93L	B
	48-9175	9175-30909	DQ877560	PI	NA	M46L, I54V, V82F, I84V, L90M	Q58E	L10I, I15V, K20R, E35D, M36I, L63P, A71V, I72V, V77I, I93L	B
	48-9318	9318-30923	DQ877647	PI	NA	M46I, I54V, L76V, V82F, L90M	L23I, Q58E	L10I, K14R, K20R, E35D, M36I, N37D, I62V, L63P, I64V, A71V, I93L	B
	48-9089	9089-30827	DQ877654	PI	NA	M46I, V82F, I84V, L90M	L33F, K43T, T74P	L10I, I13V, L19I, M36L, N37ND, I62V, I64V, I72V, I93L	B
	48-9044	9044-30925	DQ877737	PI	NA	M46I, I54IV, V82F, I84V	L33F, T74P	L10I, I15V, G16E, Q18R, L19P, K20L, N37S, I62IV, V77VI, I85V, L89M	B
	48-9047	9047-30929	DQ877740	PI	NA	M46I, I54L, L76V, V82F, L90M	L33F, F53L	L10I, I13V, L19I, R41K, L63V, I64V, H69Y, A71T, V77I, I93L	B
	48-8051	8051-30924	DQ879077	PI	NA	M46I, L76V, V82F, L90M	L33F, Q58E, G73S, L89V	L10I, I13V, R57K, Q61H, I62V, L63P, A71T, T74K, V77I, I93L	B
Rhee (2006)	CA5617	CA63829		IDV, APV, LPV	500	M46I, I54V, L76V, V82F, L90M		L10I, T12TP, I13V, I15IV, L19Q, K20I, E35D, M36I, R57RK, I62V, L63P, I64V, A71V, I72V	B
	CA7877	CA20311		IDV, NFV	230	I54V, V82F, L90M		L10I, I15V, L19I, R57K, L63A, I66L, A71V, I93L	B
Sanabani (2006)	02BR006	02BR006	DQ358807	PI	NA	I54V, V82F, L90M		L10I, L19V, E35D, M36I, L63P, L89M, I93L	B
Santos (2006)	043	043PR	AY275774	IDV	100	V82F		E35D, L63P, I93L	B
Rhee (2009)	CA16315	CA38782	FJ983411	IDV	104	M46ML, I54V, V82F		L10I, I64V, A71V, V77I, I85V, I93L	B
	CA23838	CA55303	FJ983512	IDV	260	I54V, V82F, L90M		L10I, K20I, E35D, M36I, N37DE, I62V, L63P, I64V, A71T, I85V, I93L	B
Dau (2010)	06350A	06350A	GU581738	PI	NA	M46I, I54V, V82F, L90M	F53FL	L10I, I13IV, K20I, E35D, M36I, N37D, R41K, I62IV, L63P, I64V, A71V, I72T, T74S, I93L	B
	06566A	06566A	GU581761	PI	NA	M46I, I54V, V82F, I84V, L90M	F53L	L10I, I13V, K20I, E35N, M36I, N37S, D60E, L63P, A71V, I93M	B
	06883A	06883A	GU581794	PI	NA	M46L, I54V, L76V, V82F	L23I, L33F	L10I, I13V, E35D, N37S, I62V, L63P, I64V, A71T, T74S, V77I, I93L	B
	06983A	06983A	GU581809	PI	NA	M46I, I47IV, I54A, V82F	L33F, L89V	L10I, I13V, Q18QH, N37H, P39E, D60E, Q61DEKN, I62IV, L63P, I66F, A71T, I72V, V77I, I93IV	B
	07032A	07032A	GU581810	PI	NA	M46I, I54V, V82F, L90M	G73C	L10I, K20I, I62V, L63P, A71V, I72L, V77I, I93L	B
	09217A	09217A	GU581961	PI	NA	M46I, V82F, L90M	G73S	L10V, T12TA, I15IV, L19I, K20KT, R57K, Y59YF, I62V, L63P, A71V, I72IV, V77I, I93L	B
	10207A	10207A	GU581995	PI	NA	M46I, V82F, I84V	Q58E	L10I, T12E, K55R, I64V, H69Y, V77I, I93L	B
	11486A	11486A	GU582045	PI	NA	M46I, I54M, L76V, V82F	L33F, K43T	L10I, I13V, E35D, M36V, D60E, L63P, E65D, H69HY, A71V, I72V, L89LM, I93L	B
Knops (2010)	ID0237	ID0237-GT2	GU271155	Unknown, LPV	>72	M46L, L76V, V82F, L90M	L23I, L33F, Q58E	L10I, I13V, M36L, K55KR, I62V, I64V	B
Rhee (2010)	CA798	CA84123	GQ213030	SQV, IDV, RTV, LPV	501	M46I, I54V, V82F, L90M	Q58E, G73C	T4A, L10I, I13V, I15V, K20I, E35DN, M36I, R57K, D60E, Q61N, I62V, L63P, I72T, T74S, Q92K	B
	CA5617	5617_0409		IDV, APV, LPV	536	M46I, I54V, L76V, V82F, L90M		L10I, I13V, I15IV, L19Q, K20I, E35D, M36I, R57RK, I62V, I64V, A71V, I72V, I93F	B
	CA6602	CA84187	GQ213088	Unknown, APV, LPV, FPV	>302	M46I, I54V, V82F, L90M	L33F, K43T, G73AT	L10I, I13V, K20R, E35D, M36I, N37E, R57K, D60E, Q61E, I62V, L63P, I64IV, G68E, A71T, I72T, I93L	B
	CA8437	CA63793		RTV, LPV	385	M46MI, I47V, I54V, V82F	L33F, F53FL	L10IV, M36L, P39Q, R41K, I62V, L63P, A71V, I93L	B
Jones (2012)	139955	139955	JN669582	PI	NA	M46LV, L76V, V82F, L90LM		L10I, K14KR, I62IV, L63P, A71V, I72V, V77I, I93L	B
	151877	151877	JN669769	PI	NA	I54A, V82F, L90M	L33I	L10I, T12THNP, I13IV, G16E, L19IV, K20R, E34EK, E35D, M36I, D60E, I62V, L63T, A71V, I72T, I93L	B
	154262	154262	JN669815	PI	NA	I54V, V82F, L90M	V11I, L33LF, F53L	L10I, I13V, K20IM, E35D, M36AV, N37HQ, R41K, R57RK, D60DE, I62V, L63P, C67L, A71IV, I72V, C95L	B
	155358	155358	JN669840	PI	NA	I54V, V82F, L90M		E35D, M36I, N37D, I62V, L63P, I64IV, A71V, V77I, I93L	B
	158309	158309	JN669909	PI	NA	M46I, I54M, L76V, V82F		T4TS, L10IV, I62V, L63P, I64V, A71V, V77VI, I93L	B
	175394	175394	JN670356	PI	NA	M46I, I54V, V82F, L90M	Q58E	L10I, D60DE, I62V, L63P, I64IV, V77VI, I93L	B
	178734	178734	JN670491	PI	NA	M46L, I54V, V82F	L33LI, Q58E	L10I, K20R, E35D, M36I, R41K, D60E, Q61D, I64V, I72T, V77VI	B
	181228	181228	JN670569	PI	NA	I54V, V82F	L33LI, K43T	L10I, I13V, E35D, M36I, D60E, L63Q, I64V	B
	190870	190870	JN670806	PI	NA	M46I, I54V, V82F, I84V, L90M		L10I, I13V, I15V, K20I, E35D, M36I, N37D, I62V, L63P, A71V, P79A, L89LI, I93M	B
	195200	195200	JN670969	PI	NA	M46I, I54A, V82F, L90M		L10V, T12P, I13V, I15V, Q18H, K20T, E35N, M36I, N37S, L63P, I64V, A71V, T74S, V77I, L89I, I93L	B
	197645	197645	JN671075	PI	NA	M46I, I54V, V82F	L24I, K43T	L10I, D60E, Q61E, I62V, L63PT, I64V, E65D, I72V, V77I	B
	199884	199884	JN671187	PI	NA	I54V, V82F, L90M	F53L, Q58E	L10I, K20I, E35D, M36I, N37ND, R41K, R57K, D60E, Q61N, L63P, I64V, E65D, A71T, I93L	B
	202016	202016	JN671249	PI	NA	I54V, V82F	Q58E	L10I, I13V, K20V, E35D, M36I, N37DE, I62V, L63T, I64V, T74S, V77I	B

Protease Inhibitors

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