Protease Inhibitors

HOME Genotype-Rx Genotype-Pheno Genotype-Clinical hivdb program

Protease Inhibitors

Subtype	B
Gene	PR
Mutation	I54T
Rx	>= 1 PI
IncludeMixtures	No

References	21
Patients	99
Isolates	130

Sequences matching input query are shown below. Original reference, patient identifier, isolate name, partial treatment histories and accession number are indicated. Complete treatment histories, when available, can be accessed by clicking the isolate name. Sequences may additionally be downloaded in the fasta format, or viewed as individual or composite alignments using the options above. If the user wishes to view individual alignments of isolates for which there are multiple clones, the user can choose to view either an alignment of consensus sequences derived from the clones or an alignment of each clone as well as a consensus sequence.

Author (yr)	Patient	Isolate	Acc#	PIs	Wks	PIMajorDRMs	PIMinorDRMs	OtherMut	Subtype
Shafer (1998)	HMDR-1	1-896-6B	AF047303	SQV, IDV	60	G48V, I54T, V82A		L10I, L63H, A71V, V77I	B
		1-1096	AF047300	SQV, IDV, RTV	68	G48V, I54T, V82A		L10I, L63H, A71V, V77I	B
		1-197	AF047301	SQV, IDV, RTV	86	G48V, I54T, V82A		L10I, L63H, A71V, V77I	B
	HMDR-2	2-1196-6D	AF047308	SQV, RTV, IDV	145	G48V, I54T, V82A		L10I, N37T, R41K, I62V, L63P, H69Y, A71AV, T74TS, V77I	B
		2-197	AF047311	SQV, RTV, IDV	154	G48V, I54T, V82A		L10I, N37T, R41K, I62V, L63P, H69Y, A71V, T74S, V77I	B
	HMDR-3	3-1196	AF047313	SQV, IDV, RTV	67	G48V, I54T, V82A		L10I, R41K, Q61H, L63Q, A71V, T74A, V77I, I93L	B
		3-197C	AF047320	SQV, IDV, RTV	76	G48V, I54T, V82A		L10I, G16A, R41K, Q61H, I62V, L63Q, A71V, T74A, V77I, I93L	B
	HMDR-4	4	AF047321	SQV, RTV	69	M46I, G48V, I54T, V82A, L90M	I84IM	L10LI, N37D, L63P, A71L, V77I, I93L	B
Cabana (1999)	Cab-k	K21	AF102325	IDV, SQV, RTV	84	G48V, I54T, V82A		L10I, T12E, I15V, L19I, K20R, M36I, I62V, L63S, I64V, A71V, I93F	B
		K24	AF102326	IDV, SQV, RTV	96	G48V, I54T, V82A		L10I, T12E, I15V, L19I, K20R, M36I, I62V, L63S, I64V, A71V	B
		K35	AF102327	IDV, SQV, RTV	140	G48V, I54T, V82A		L10I, T12E, I15V, L19I, K20R, M36I, F53Y, I62V, L63S, A71V	B
Zolopa (1999)	CA634	CA3139	AF085108	SQV, IDV	69	G48V, I54T, V82A		L10I, K20R, E35D, M36I, N37D, I62V, L63P, A71V, V77I, I93L	B
	CA1127	CA3165	AF085122	SQV, IDV	47	G48V, I54T, V82A, L90LM		L10I, M36I, N37D, R41K, L63P, I64L, A71V, I93L	B
	CA1268	CA3045	AF085099	Unknown, SQV, IDV	>50	G48V, I54T, V82A, L90M	M46MV	L10I, I15V, E35D, M36I, I62V, L63P, A71V	B
Balotta (2000)	CB-184	CB-184	AF251986	IDV, SQV, NFV, RTV		G48V, I54T, V82A, L90M		L10I, K20KR, E34EQ, E35D, M36I, N37ND, G51G*, L63P, I64V, A71V, I93L	B
Baxter (2000)	GART-NG141	GART-141		PI, NFV	NA	G48V, I54T, V82A		L10I, G16E, K20KM, L63T, A71V, V77I, I93L	B
Rousseau (2000)	MNR2	MNR2	AJ405948	SQV, IDV, NFV	141	G48V, I54T, V82A		L10I, K20R, E35D, M36I, R41K, L63P, A71V	B
	MNR8	MNR4336	AJ405953	IDV, RTV, NFV, SQV	58	M46I, G48V, I54T, V82A		L10I, L63P, I64L, A71V, T74S, V77I, I93L	B
Shulman (2000)	CA634	CA10670	AY798357	SQV, IDV, RTV	106	M46I, G48V, I54T, V82A		L10I, K20R, L23F, E35D, M36I, N37D, I62V, L63P, A71V, I72X, V77I, I93L	B
		CA10672	AY798358	SQV, IDV, RTV, Unknown	>113	M46I, G48V, I54T, V82A		L10I, K20R, E35D, M36I, N37D, I62V, L63P, A71V, V77I, I93L	B
		CA9579	AY798359	SQV, IDV, RTV, Unknown	>155	M46MI, G48V, I54T, V82A		L10I, I15IV, K20R, E35D, M36I, N37D, I62V, L63P, A71V, V77I, I93L	B
	CA1600	CA4555	AY798400	SQV, IDV, RTV	77	G48V, I54T, V82A		L10I, R57K, L63P, I64L, A71V, I72V, V77VI	B
		CA10020	AY798401	SQV, IDV, RTV	77	G48V, I54T, V82A		L10I, R57K, L63P, I64L, A71V, I72V, V77VI	B
		CA10013	AY798402	SQV, IDV, RTV	92	G48V, I54T, V82A		L10I, R57K, L63P, I64L, A71V, I72V, I93M	B
Gonzales (2001)	CA598	CA1124	AY030412	SQV, RTV, IDV, NFV	68	M46MI, G48V, I54T, V82A	K43T	L10I, K20KR, E35D, M36I, L63P, I64V	B
	CA639	CA1218	AY798438	SQV, IDV	86	G48V, I54T, V82A		L10I, E35D, M36I, L63P, A71V	B
	CA1440	CA3850	AY030578	SQV, NFV, RTV, IDV, APV, Unknown	NA	G48V, I54T, V82A, L90M	L33F, F53FL	L10I, I13V, E35D, M36I, N37Q, R41K, I62V, L63C, I64V, A71T, T74TS, V77I, I93L	B
	CA3885	CA9661	AY030890	IDV, NFV	100	G48V, I54T, V82A		L10I, L19I, E35D, N37D, R41RK, L63P, A71I, I72IV, V77I	B
	CA4345	CA10753	AY031208	IDV, NFV, SQV, RTV	148	M46I, G48Q, I54T, V82F, L90M	K43T	L10I, E35D, M36I, N37D, I62V, L63T, I72V, V77I, L89M, I93L	B
	CA5481	CA13556	AY032020	SQV, NFV, RTV, IDV	187	G48V, I54T, V82A		L10I, I64V, A71V, T74S, V77I	B
Kempf (2001)	DK-8805	DK-8805		IDV, SQV, RTV	169	M46L, G48V, I54T, V82A		L10I, R41K, L63P, A71L, I72IT, V77I, I93L	B
		6359_d93		IDV, SQV, RTV, LPV	182	M46L, G48V, I54T, V82A		L10I, R41K, L63P, H69HY, A71L, V77I, I93L	B
Servais (2001)	JS15	JS98275	AJ401939	RTV, IDV, SQV	132	G48V, I54T, V82A		L10I, E35D, N37S, A71V, I93L	B
	JS22	JS99024	AJ401965	RTV, IDV, SQV	132	I54T, V82A		L10I, E35D, M36I, N37D, L63A, A71V, I93L	B
Romano (2002)	MZ-pt7	pt7-t0	AF493342	RTV, SQV, IDV, NFV		G48V, I54T, V82A		L10I, D60E, I62V, L63P, A71V, V77I	B
		pt7-t1	AF493383	RTV, SQV, IDV, NFV, LPV		M46ML, G48V, I54T, V82A	L33F	L10I, D60E, I62V, L63P, A71V, V77I	B
Monno (2003)	ML_Pat55	ML_Pat55		PI	NA	G48V, I54T, V82A		L10I, L19I, I62V, L63A, C67E, H69R, A71V, I72IV	B
	ML_Pat78	ML_Pat78		PI	NA	I54T, V82A	G48I, F53L	L10I, T12S, L19I, L63P, I64V, A71V, I72V, T74S, V77I	B
	ML_Pat95	ML_Pat95		PI	NA	G48V, I54T, V82A, L90M		L10I, I13V, K20R, E34K, M36I, R41K, K55KR, I62V, L63P, I64M, H69R, A71V, T74S, I93M, C95F	B
Wu (2003)	CA1127	CA16213	AF544427	SQV, IDV, RTV	211	G48V, I54T, V82A		L10I, K20R, E35ED, M36I, N37D, R41K, I62IV, L63PS, I64L, A71V, I93L	B
	CA1268	CA9659	AF544449	Unknown, SQV, IDV, RTV, NFV	>128	G48V, I54T, V82A, L90M	M46V	L10I, I15V, K20R, E35D, M36I, I62V, L63P, A71V, I93M	B
Grossman (2004)	IL756	IL756	AY529611	IDV	50	G48V, I54T, V82A		L10I, K20R, E35D, M36I, N37D, R57K, L63P, H69R, A71V, V77VI	B
Montes (2004)	MB_patCOR	01_CORN708	AJ577869	SQV, RTV, LPV, APV	111	M46I, G48V, I50V, I54T, V82A	L33F	L10I, E34Q, E35D, M36I, N37D, L63P, A71V, I93L	B
Rhee (2005)	CA371	CA13190	AY796426	SQV, Unknown	>24	G48V, I54T, V82A	M46V	L10I, K14KR, N37H, L63P, A71V, T74S, V77I, I93L	B
	CA634	CA13259	AY796447	SQV, IDV, RTV, Unknown	>194	M46I, G48V, I54T, V82A	K43T	L10I, I15V, K20R, E35D, M36I, N37D, I62IV, L63P, A71V, V77I, I93L	B
		CA20600	AY796448	SQV, IDV, RTV, Unknown, APV, LPV	>239	G48V, I54T, V82A	L33F	L10I, K20R, E35D, M36I, N37D, I62V, L63P, A71V, I72V, V77I, I85V, I93L	B
	CA639	CA24751	AY796456	SQV, IDV, Unknown	>86	M46MI, G48V, I54T, V82A	K43T	L10I, G16A, K20R, E35D, M36I, L63P, A71V, I93L	B
	CA1127	CA2537	AY796502	SQV, IDV, RTV	80	G48V, I54T, V82A		L10I, M36I, N37D, R41X, L63P, I64L, A71V, I93L	B
	CA1268	CA3745	AY796577	Unknown, SQV, IDV, RTV	>71	G48V, I54T, V82A, L90M	M46MV	L10I, I15V, E35D, M36I, K43N, I62V, L63P, A71V	B
		CA3362	AY796578	Unknown, SQV, IDV, RTV	>73	G48V, I54T, V82A, L90M	M46MV	L10I, I15V, K20R, E35D, M36I, I62V, L63P, H69HR, A71V, I93IL	B
	CA1600	CA23979	AY796801	SQV, IDV, RTV	146	M46ML, G48V, I54T, V82A	L33LF	L10I, L63P, I64L, A71V, I72V, I93IL	B
	CA4345	CA17500	AY797059	IDV, NFV, SQV, RTV	212	M46I, G48Q, I54T, V82F, L90M	K43T	R8RQ, L10I, K20R, E35D, M36I, N37D, R41RK, I62V, L63T, I64M, I72V, V77I, L89M, I93L	B
		CA23508	AY797060	IDV, NFV, SQV, RTV, LPV	277	M46I, G48Q, I54T, V82F, L90M	L33F, K43T	L10I, K20R, E35D, M36I, N37D, R41K, Q61QE, I62V, L63T, I72V, V77I, L89I, I93L	B
	ASRU018	ASRU018		SQV, RTV, IDV, NFV, APV	130	G48V, I54T, V82A		L10I, L63P, A71V, V77I	B
	CA5111	CA37930	AY797234	IDV, SQV, RTV, APV, LPV	317	G48L, I54T, V82A, I84V, L90M	L33F, K43T, T74P	L10I, I13V, K20R, E34Q, E35D, M36I, N37S, R41K, I62V, L63P, I64V, A71T, I93L	B
	CA8346	CA21268	AY797711	SQV, IDV, RTV	264	G48V, I54T, V82A		L10I, L63P, A71V, V77I	B
		CA38088	AY797712	SQV, IDV, RTV, Unknown	>360	G48V, I54T, V82A		L10I, D60DE, L63P, H69HY, A71V, V77I	B
Baxter (2006)	12-1001	1001-30227	DQ875949	PI	NA	G48GASW, I54T, V82A	L33F	L10I, V11L, G16A, L19V, K20R, E34Q, E35D, M36I, N37E, D60E, L63P, I64IL, A71V, V77I, L89I, I93L	B
	12-1159	1159-30501	DQ876054	PI	NA	M46I, G48V, I54T, V82A, I84V		L10I, T12I, L19V, D60E, Q61G, L63P, A71V, V77I, I93L	B
		1159-31223	DQ879102	PI, RTV, TPV	>34	M46I, G48V, I54T, V82T, I84V	L33LF	L10I, T12I, L19V, D60E, Q61G, L63P, A71V, V77I, I93L	B
	12-1986	1986-30724	DQ876067	PI	NA	M46I, G48V, I50V, I54T, V82A		L10I, I15V, L19I, K20R, E34K, E35D, M36I, R41K, I64V, T74S	B
	12-3050	3050-30508	DQ876114	PI	NA	G48V, I50V, I54T, V82A	L33F	L10I, K20R, E34K, E35D, M36I, R41K, L63P, A71V, I93L	B
		3050-31120	DQ876737	PI, RTV, TPV	>28	G48V, I50V, I54T, V82A	L33F	L10I, K20R, E34R, E35D, M36I, R41K, L63P, A71V, I72IM, I93L	B
	12-4022	4022-30527	DQ876137	PI	NA	M46I, G48V, I54T, V82T	L24I	L10I, T12P, K14R, I15V, K20M, E35D, M36I, R41K, L63P, A71I, I72V	B
	12-4059	4059-30716	DQ876141	PI	NA	M46MI, G48V, I50V, I54T, V82A	L33I, Q58E	L10I, I13V, K20R, E34Q, E35D, M36I, L63P, A71I, I72V, I93L	B
	12-1308	1308-30408	DQ876223	PI	NA	M46L, G48V, I54T, V82A	L24LI, L33F, K43T	L10I, I13V, K20R, E35D, M36I, N37D, I62V, L63Q, I72V, T74S, I85V, L89M	B
	12-2271	2271-30822	DQ876323	Unknown, PI	NA	G48V, I50IV, I54T, V82A, I84IV	K43T, G73GA, L89V	L10I, I13V, L19P, K20IM, E35G, M36I, I62V, L63P, C67CY, A71V	B
	12-2165	2165-30821	DQ876354	PI	NA	G48V, I54T, V82A	K43KT	L10I, L19LI, K20R, E35D, M36I, N37D, L63P, A71I, I72V, I93M	B
	12-2104	2104-30619	DQ876432	PI	NA	G48V, I54T, V82T	L33F	L10I, I13V, M36L, N37D, D60E, I62V, L63Q, I66F, H69Y, A71V, I72T	B
	12-2196	2196-30630	DQ876436	PI	NA	M46I, G48V, I54T, V82S		L10V, I15V, G16GE, K20R, E35D, M36I, N37S, P39PS, R41K, R57K, I62V, L63C, A71V, I72V, T74S, V77I, I93L	B
	12-1344	1344-30430	DQ876465	PI	NA	G48L, I54T, V82A, I84V, L90M	L33F, K43T, T74P	L10I, I13V, K20R, E34Q, E35D, M36I, N37S, R41K, I62V, L63P, I64V, A71T, I93L	B
	12-1691	1691-30421	DQ876524	PI	NA	G48V, I54T, V82A, L90M		L10I, K20R, M36I, N37D, I62V, L63P, I64L, A71L, I93L	B
	12-1381	1381-30423	DQ876552	PI	NA	G48V, I54T, V82A		L10I, T12E, I13V, K14R, G16A, N37D, Q61D, L63P, I64V, T74A, V77I	B
	12-1891	1891-30619	DQ876579	PI	NA	M46I, G48V, I54T, V82S		L10I, I15V, K20M, E35D, M36I, R41K, I62V, L63P, A71L, I93L	B
	12-1836	1836-30710	DQ876587	PI	NA	M46I, G48V, I54T, V82S	K43KT	L10I, K20R, E35D, M36I, N37E, I62V, L63A, A71V, T74S, V77I, I93L	B
	12-2325	2325-30804	DQ876633	PI	NA	M46L, G48V, I54T, V82A, L90M		L10I, I15V, K20R, E35D, M36I, R41K, I62V, L63P, A71V, I93L	B
	12-1199	1199-30225	DQ876648	PI	NA	G48L, I50V, I54T, V82A		L10I, I15V, G16A, N37S, L63P, A71T, V77I, I85V, Q92K	B
	12-2225	2225-30820	DQ876706	PI	NA	M46L, G48V, I54T, V82A	L24I, L33F	L10I, F53Y, K55KR, L63P, A71V, V77I	B
	12-2063	2063-30625	DQ876712	PI	NA	M46L, G48V, I54T, V82A	L33F, Q58E	L10IV, I13IV, L19T, K20R, M36I, R41K, L63P, A71V, I72V, I93L	B
	12-1444	1444-30603	DQ876846	PI	NA	M46L, G48V, I54T, V82A	L33F	L10V, I13V, K14KR, K20R, N37D, L63P, A71V, I72IM, I93L	B
	12-1508	1508-30515	DQ876903	PI	NA	M46L, G48V, I54T, V82A		L10I, K20KR, M36MI, L63P, A71V, I72V, I93M	B
	12-2043	2043-30609	DQ876919	PI	NA	G48V, I54T, V82S	L33F, T74P	L10I, I13V, E34Q, N37S, I62V, L63P, A71V, V77I	B
	12-1591	1591-30618	DQ877106	PI	NA	M46I, I54T, V82A, L90M	K43KT, G73GS	L10I, I15V, G16A, K20L, N37D, L63P, A71L, T74S, V77I, I85V, I93L	B
	12-3089	3089-30430	DQ877190	PI	NA	G48MV, I54T, V82A, I84V	L33LF, K43T	L10I, K20R, E34R, E35D, M36I, I62IV, L63P, A71V, I72V, V77I, I93L	B
	12-3186	3186-30613	DQ877204	PI	NA	G48V, I54T, V82A		L10I, K14KR, L19LI, N37ND, L63P, I64IM, A71V, V77I	B
	48-1051	1051-30630	DQ877271	PI	NA	M46L, G48V, I54T, V82A	L33F	L10I, L19I, N37CS, L63P, A71V, V77I, L89LIM, I93IL	B
	48-1005	1005-30609	DQ877309	PI	NA	M46L, G48V, I54T, V82A	L33F, Q58QE	L10I, D60E, Q61E, L63P, A71V, V77I, I93L	B
		1005-30909	DQ877744	PI, RTV, TPV	>13	M46L, G48V, I54T, V82T	L33F, Q58QE	L10I, I13IV, D60E, Q61E, L63P, A71V, V77I, I93L	B
		1005-40615	DQ877743	PI, RTV, TPV	>53	M46L, G48V, I54T, V82T	L33F	L10IV, I13V, M36MI, D60E, Q61E, L63P, A71V, T74TA, V77I, L89LM, I93L	B
	48-1097	1097-30730	DQ877348	PI	NA	G48MV, I54T, V82S	L33F	L10I, I15V, G16A, K20M, M36I, I62IV, L63P, A71V, L89LI	B
	48-1035	1035-30618	DQ877390	PI	NA	M46I, G48V, I54T, V82A		L10I, L19I, E35D, N37S, L63P, H69R, A71V	B
	48-1139	1139-30814	DQ877399	PI	NA	M46L, G48V, I54T, V82A	L24I	L10I, K20R, E35D, M36I, N37DE, R41K, K43R, R57K, Q61N, L63C, T74S, L89M	B
	48-2004	2004-30424	DQ877839	PI	NA	M46I, I54T, V82A	L10F, L33I, K43T	I13V, K20T, M36I, K55R, R57K, D60E, Q61DE, L63P, I64V, A71V	B
	48-2018	2018-30514	DQ877848	PI	NA	G48V, I54T, V82A	K43KT	L10I, N37ND, D60E, Q61DE, L63P, H69HQ, A71I, V77I, I93M	B
	48-2020	2020-30915	DQ877850	PI	NA	G48V, I54T, V82A, I84V	L33F, M46V, Q58E	L10I, I13IV, K20R, E34HKNQ, E35D, M36I, P39PS, R41K, I62V, L63P, A71V, V77T, I93L	B
	48-2605	2605-30317	DQ877897	PI	NA	M46L, G48V, I50V, I54T, V82A	L33I	L10IV, K20R, M36I, N37S, I62V, L63P, I64V, H69R, A71V, I85V	B
	48-3040	3040-30304	DQ877951	PI	NA	M46I, I54T, V82A	L24I, L33F, K43T, T74P	L10I, I13V, E34Q, N37S, R41K, I62V, L63P, A71V, V77I	B
	48-3103	3103-30317	DQ878010	PI	NA	M46L, G48V, I54T, V82A, L90M		L10I, T12P, L19I, K20R, M36I, I62V, L63P, A71V, I93L	B
	48-3147	3147-30409	DQ878058	PI	NA	M46L, G48M, I54T, V82A, L90M	L33F	L10I, E34Q, R41K, K55R, R57K, I62V, L63P, A71L, I93L	B
	48-3234	3234-30528	DQ878141	PI	NA	M46L, G48V, I54T, V82A, L90M	L33F, K43T	L10I, T12P, K14R, K20M, E34Q, E35D, M36I, N37D, I62V, L63P, I64V, A71T, I72IV, I93L	B
	48-3313	3313-30929	DQ878215	PI	NA	G48V, I54T, V82A, L90M	V11I, L33F, K43T	L10I, I13V, L19T, K20KR, Q61E, I62V, L63P, A71L, I72IT, V77I, I93L	B
	48-4223	4223-30522	DQ878458	PI	NA	M46I, G48V, I54T, V82A	L24LI	L10I, G16A, K20R, E35D, M36I, N37E, R57RK, I64V	B
	48-4267	4267-40518	DQ878500	PI, RTV, TPV	>47	M46I, I54T, V82VL, I84V, L90M	L33I	L10I, I13V, K20I, E34Q, E35G, M36I, L63P, I64V, T74S	B
	48-4292	4292-30825	DQ878514	PI	NA	M46I, G48V, I54T, V82A, I84V		L10I, K14R, I15V, K20I, E21Q, Q61G, L63P, A71I, V77I, I85V, I93L	B
	48-5007	5007-30626	DQ878540	PI	NA	M46I, G48V, I54T, V82A	L33I	L10I, I13V, L19I, K20M, E35DN, M36I, N37D, I62V, L63P, I64V, T74S, N83S, T91TS	B
	48-6034	6034-30423	DQ878633	PI	NA	G48V, I54T, V82A		L10I, K20R, E34Q, E35D, M36I, N37D, R57K, D60DE, Q61QHKN, L63AP, A71I, I72V, I93L	B
	48-6105	6105-30613	DQ878697	PI	NA	M46L, G48V, I54T, V82A, L90LM	L24LI, L33F, K43T	L10IV, E35D, M36L, N37D, Q61N, L63P, A71V, T74S, V77I, L89I, T91S, I93L	B
	48-6186	6186-30723	DQ878758	PI	NA	M46I, G48V, I50V, I54T, V82A		L10I, T12P, K14R, G16E, K20R, E34N, E35D, M36I, N37S, R41K, L63T, I64V, I85V	B
	48-6287	6287-30828	DQ878835	PI	NA	G48V, I54T, V82A	Q58E	L10I, G17D, L19I, K20R, E34Q, E35D, M36I, N37D, I62V, L63P, A71T, V77L	B
	48-6299	6299-30912	DQ878841	PI	NA	M46I, I47V, G48L, I54T, V82A, L90M	V11I	L10V, T12P, I13V, K14R, I15V, G16E, K20I, M36I, F53Y, L63T, I64V, H69K, A71I, T74S, I93L	B
	48-6314	6314-30917	DQ878851	PI	NA	M46MI, G48V, I50V, I54T, V82A	Q58E	L10V, I15V, G16A, K20R, E34A, E35D, M36I, L63P, A71V, I93L	B
	48-7018	7018-30724	DQ878901	PI	NA	M46I, G48V, I50V, I54T, V82A	L33F	L10I, M36I, N37D, L63P, I64V, A71V, I72IV, T74S, I93L	B
	48-7020	7020-31216	DQ878903	PI, RTV, TPV	>16	M46L, G48M, I54T, V82A	L24IM, Q58E	L10I, I15V, Q18I, K20R, E35D, M36I, R41K, D60E, Q61D, L63P, I64V, A71V, T91TA, Q92QK	B
	48-7057	7057-30728	DQ878928	PI	NA	G48V, I54T, V82A, L90M		L10I, K20R, E35D, M36I, N37D, I62V, L63P, I64L, A71V, V77I, I93L	B
	48-7085	7085-30612	DQ878939	PI	NA	G48V, I54T, V82A	L24I, L33F	L10I, N37D, F53FY, L63P, A71V	B
	48-7092	7092-30930	DQ878946	PI	NA	M46I, I47V, I54T, V82F, L90M	L33LF, K43T	L10I, R41K, I62V, L63P, I64IL, A71L, V77I, I85V, L89F, I93L	B
	48-7146	7146-30610	DQ878984	PI	NA	G48L, I54T, V82S		L10I, T12K, I13V, I15V, K20I, L63P, A71I, I72V, V77I, P79D, Q92R	B
	48-7171	7171-30701	DQ879008	PI	NA	M46L, G48V, I54T, V82A, L90M	L33F, L89V	L10V, I13IV, K14R, L19I, E34Q, R41K, I62IV, L63P, A71I, I72T, V77I, I93L	B
	48-7204	7204-30829	DQ879029	PI	NA	G48V, I54T, V82A, L90M	L33F	L10I, G16GE, K20R, E34Q, E35D, M36I, N37E, R41K, I62V, L63C, A71V, I93L	B
	48-9213	9213-30908	DQ877287	PI	NA	I54T, V82A, L90M	L33F, G48I, F53L	L10V, T12TI, I15V, G16A, K20R, E34EQ, E35D, M36I, N37D, R41K, R57K, I62V, L63P, A71I, I72V, L89I, I93L	B
	48-9273	9273-30918	DQ877521	PI	NA	M46I, G48V, I50V, I54T, V82A, L90M	L33F, K43T	L10IV, K20R, E34N, E35D, M36I, N37NS, R41K, Q61EG, I62V, L63ADHP, I64IL, A71V, I72IT, T74S, L89M, I93L	B
	48-9097	9097-30930	DQ877662	PI	NA	G48V, I50V, I54T, V82A	G73GA, L89V	L10I, I15V, K20R, E35D, M36I, R41K, I62V, L63P, G68GE, A71V, I72V, I85V	B
	48-8003	8003-30501	DQ879048	PI	NA	G48V, I54T, V82A, L90M	L33F, Q58E	L10I, I13V, K20R, E34N, E35D, M36I, N37D, I62V, L63P, A71T, I93M	B
Rhee (2006)	CA5481	CA63835		SQV, NFV, RTV, IDV, ATV	297	G48V, I54T, V82A	K43T	L10I, I62IV, I64V, A71V, T74S, V77I	B
Rosen-Zvi (2008)	10	01p10-3		IDV, SQV, NFV, RTV, LPV	162	G48V, I54T, V82A, L90M		L10V, L19I, E34EQ, N37S, R41RK, I62V, L63P, I64V, H69R, A71V, T74S, V77I	B
	65	02p65-4		RTV, SQV, NFV, IDV, LPV, APV	285	M46I, I54T, V82A, L90M	L10F, L33F, G73T, L89V	G16A, N37D, R41K, I62V, L63P, A71V, V77I	B
		02p65-5		RTV, SQV, NFV, IDV, LPV, APV	302	M46I, I54T, V82A, L90M	L10F, L33F, G73T, L89V	G16A, N37D, R41K, I62V, L63P, C67Y, A71V, I72IT, V77I	B
Rhee (2009)	CA9956	CA55121	FJ983335	NFV, SQV, LPV	377	G48V, I54T, V82A, L90M		L10V, L19I, K20R, E35D, M36I, N37D, R41K, L63P, I64V, A71V, I93L	B
Dau (2010)	06749A	06749A	GU581776	PI	NA	M46I, G48V, I54T, V82S	L24I, L33F, Q58E	L10I, I13V, Q61N, L63T, I64V, I72V, T74A, V77I	B
	08882A	08882A	GU581953	PI	NA	G48V, I50IV, I54T, V82A	K43T, G73A, L89V	P9PR, L10I, I13V, L19P, K20M, E35G, M36I, I62V, L63P, C67CY, A71V	B

Protease Inhibitors

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