Protease Inhibitors

HOME Genotype-Rx Genotype-Pheno Genotype-Clinical hivdb program

Protease Inhibitors

Subtype	B
Gene	PR
Mutation	K43R
Rx	PI-naive
IncludeMixtures	No

References	107
Patients	562
Isolates	570

Sequences matching input query are shown below. Original reference, patient identifier, isolate name, partial treatment histories and accession number are indicated. Complete treatment histories, when available, can be accessed by clicking the isolate name. Sequences may additionally be downloaded in the fasta format, or viewed as individual or composite alignments using the options above. If the user wishes to view individual alignments of isolates for which there are multiple clones, the user can choose to view either an alignment of consensus sequences derived from the clones or an alignment of each clone as well as a consensus sequence.

Author (yr)	Patient	Isolate	Acc#	PIs	PIMinorDRMs	OtherMut	Subtype
Hammer (1997)	ACTG320_1113	1113		None		I13V, I15V, L19I, K43R, I62V, L63Q, I64M	B
	ACTG320_288	288		None		N37E, K43R, V77I	B
	ACTG320_3223	3223		None		E35D, N37S, R41K, K43R, R57K, I62V, L63P, A71T, V77I, V82I, I93L	B
	ACTG320_462	462		None		L19LI, R41K, K43R, I62V, L63P, A71V, V77I, I93L	B
	ACTG320_467	467		None		K43R, I64IV	B
	ACTG320_92	92		None	L33I	K43R, L63P, I93L	B
	ACTG320_928	928		None	Q58E	K14KR, G17E, K43R, L63P	B
Ruiz (1998)	LR-DD	DDW0		None		K43R, L63P, H69K, I93L	B
Cabana (1999)	Cab-e	E0	AF102293	None		R41K, K43R, I62V, L63P, V77I, I93L	B
Bacheler (2000)	LB3-P2	P2-0		None		N37D, K43R, L63P, V77I, I93L	B
	LB3-P41	P41-0		None		L10I, I13V, K43R, L63P, I93L	B
	LB3-P73	P73-0		None		K43R, Q58R, I62V, L63P, V77I, I93L	B
Balotta (2000)	CB-253	CB-253	AF252056	None		L19I, K43R, L63P, K70R	B
Belec (2000)	nr51	nr51_m0	AF204365	None		L10I, K43R, L63P, V77I, I93L	B
	r56	r56_m0	AF204371	None		N37D, K43R, L63P, A71T, V77I	B
Si-Mohamed (2000)	AS_FIA	AS_FIA	AF199272	None		L10I, I13V, N37S, K43R, L63P, H69Q, V77I	B
Albrecht (2001)	ACTG364_2253	2253		None		K14R, E35D, M36I, R41K, K43R, I62V, L63P, I72V, V77I	B
Bacheler (2001)	DMP004-141	04-141116B	AF349396	None		T12S, I15V, K43R, L63P	B
Gonzales (2001)	CA1500	CA4285	AY030626	None		K43R, L63P, V77I, I93L	B
	CA2257	CA8181	AY030843	None		K43R, I62V, L63P, I93L	B
	CA4170	CA10010	AY031147	None		K43R, I62V, L63P, V77I, I93L	B
	CA6393	CA16152	AY032348	None		E35D, N37S, K43R, L63P, H69K, I72V, I93L	B
	CA6417	CA16186	AY032371	None		T12N, K43R, L63P, V77I, I93L	B
	CA6824	CA16992	AY032556	None		R8RQ, K14R, R41K, K43R, L63P	B
Kijak (2001)	ARG-64	ARG-64	AF329606	None	L33I	E35D, N37H, R41K, K43R, L63P, I64V, I93L	B
Perez (2001)	EP-1875	EP-1875	AF320541	None		N37D, K43R, K55R, L63P, V77I	B
	EP-2154	EP-2154	AF320549	None		L10I, R41K, K43R, I62V, L63T, A71T, V77I, I93L	B
Perno (2001)	PCF_Pat113	PCF3081	AF376665	None		T12TS, I15V, E35D, N37E, K43R, L63P, I93L	B
Servais (2001)	JS92275	JS92275	AJ279638	None		I13V, G16E, K43R, L63S, H69K, V77I, Q92K	B
Gibb (2002)	DMG82	82_w-30		None		E35D, M36MI, K43R, R57K, L63P, G68DE, H69K, A71V, I93L	B
	DMG97	97_w0		None		L33LV, E35D, N37D, K43R, Q61QE, L63P, I64V, H69HY, I93L	B
Hierholzer (2002)	EC102	EC102	AY173960	None		T12Q, L19V, N37D, K43R, A71T	B
Machado (2002)	346	cdpol346	AF373737	None		T12S, R41K, K43R, L63P, V77I, I93L	B
Podzamczer (2002)	16	BAA139814		None		L10I, R41K, K43R, D60E, I62V, L63PS, V77VI, I93L	B
Brindeiro (2003)	BRP2101	BRP2101	AY213368	None		L10I, K14R, L19I, E35N, N37D, K43R, L63P, I72T, V77I	B
	BRP2148	BRP2148	AY213453	None		L10I, L19I, E35D, K43R, I62V, L63S, I72V, V77I, L89M, I93L	B
Jorgensen (2003)	JLB_Pat8	HIM419434	AJ419434	None		T12A, L19I, K43R, I62V, L63C, I72V, V77I, I93L	B
	JLB_Pat71	HIM419497	AJ419497	None		I13V, K14R, I15V, K43R, D60E, Q61E, I62V, L63P, I93L	B
	JLB_Pat86	HIM419512	AJ419512	None		K14R, E35ED, N37NS, K43R, D60E, Q61E, I62V, L63P, V77I, I93L	B
Maljkovic (2003)	MI_Pat36	01SE21259	AY165256	None		T12S, L19V, E35D, P39T, K43R, R57K, L63P, V82I, I93L	B
Shafer (2003)	A384_3174	3174a	EF548351	None		I13V, I15V, E35D, R41K, K43R, L63P, I72IV, Q92K	B
	A384_4000	4000a	EF548416	None		G16E, R41K, K43R, I62IV, L63T, I64L, I72IT, V77I	B
	A384_3638	3638a	EF548794	None		K43R, I62V, L63P, I72E, V77I, I93L	B
	A384_1484	1484a	EF548884	None		N37S, R41K, K43R, I62V, L63P, I64L, V77I, I93L	B
	A384_7263	7263a	EF548894	None		I13V, G16E, N37S, K43R, L63N, V77I	B
	A384_0484	0484a	EF548927	None		K43R, L63P, E65D	B
	A384_3452	3452a	EF549038	None		R41K, K43R, I62V, L63P, V77I, I93L	B
	A384_0074	0074b	EF549094	None		M36I, R41K, K43R	B
	A384_2586	2586a	EF549158	None		I13V, K14R, N37D, K43R, L63P, I72IV	B
	A384_1744	1744a	EF548750	None		T12A, E35D, K43R, I62V, L63P, I93L	B
	A384_0208	0208b	EF549323	None		I13V, R41K, K43R, L63P, F99X	B
Soares (2003)	BRP2018	BRP2018	AF527201	None		L19V, N37E, K43R, R57K, I62V, L63P, I72M, C95S	B
	BRP2397	BRP2397	AF527315	None		I13V, I15V, L19S, K43R, L63P, C95S	B
Weber (2003)	1C	IRIS1C-0	AY140807	None		K43R, I62IV, L63P, A71T, V77I, I93L	B
Gulick (2004)	RG192	RG192w0		None		L10I, R41K, K43R, L63PQ, I64V, I93L	B
		RG192w24		None		L10I, R41K, K43R, L63Q, I64V, I93L	B
	RG210	RG210w0		None		T12N, E21EG, E35ED, N37D, K43R, D60E, L63P	B
	RG290	RG290w0		None		T12TA, P39Q, K43R, I62V, L63Q, A71T, I72V, V77I, F99X	B
	RG300	RG300w34		None		K43R, L63P, A71T, V77I, I93L	B
	RG465	RG465w0		None		T12A, K14R, R41K, K43R, D60E, L63P, I64V	B
Machado (2004)	cs152	cs152	AY313354	None		I15V, K43R, L63P	B
Montes (2004)	MB_patDAV D	01_DAVD712	AJ577876	None		E35D, P39S, K43R, R57K, L63P, I64L, A71V, I72V, V77I, I93L	B
Pariente (2004)	pt17	17	AY315970	None		L19I, N37D, K43R, L63P, H69N	B
	pt54	54	AY316058	None		K43R, R57RK, A71T, V77I, I93L	B
Rhee (2005)	JIDP35	JIDP35W56		None		L10I, N37S, R41K, K43R, I62V, L63P, V77I, I93L	B
	JIDP29	JIDP29W0	AF078595	None		K43R, I62V, L63P, I93L	B
		JIDP29W104		None		K43R, I62V, L63P, V77I, I93L	B
	CA1500	CA12908	AY796736	None		K43R, L63P, V77I, I93L	B
	CA2257	CA20372	AY796914	None		R41RK, K43R, I62V, L63P, I93L	B
	CA4344	CA10752	AY797058	None		K43R, L63PS, A71V, V77I, I93L	B
	CA6417	CA17031	AY797399	None		R8RQ, T12N, K43R, L63P, V77I, I93L	B
	CA8011	CA20510	AY797645	None		R41K, K43R, I62V, L63S, A71V, I72T, V77I, I93L	B
	CA8030	CA20546	AY797659	None		I13IV, K43R, I62V, L63P, V77I, I93L	B
	CA9772	CA23995	AY797847	None		I15V, K43R, I62V, L63P, A71V, I72T, I93L	B
	CA14191	CA33300	AY797999	None		N37D, K43R, D60E, Q61E, L63P, I72V, V77I, I93L	B
	CA16384	CA38926	AY798242	None		K43R, R57K, I62V, L63P, A71T, I72V, V77I, I93L	B
	CA17616	CA41472	AY798271	None		K43R, L63P, I72E, V77I	B
	CA21033	CA48379	AY798311	None		T12S, R41K, K43R, K45KR, L63P, I64V, V77I, I93L	B
Tee (2005)	MYIDUA10	04MYIDUA10	DQ018349	None		L19V, E35D, K43R, L63P, I93L	B
	MYIDUA11	04MYIDUA11	DQ018350	None		L19V, E35D, K43R, L63P, I93L	B
	MYIDUA12	04MYIDUA12	DQ018351	None		I15IV, E35D, K43R, L63P, I93L	B
	MYIDUC1	04MYIDUC1	DQ018355	None		K14R, K20R, K43R, Q61E, L63P, V77I, I93L	B
Babic (2006)	DB_SI7097-04	SI7097-04	AJ971281	None		I13V, I15IV, K43R, R57K, I62V, L63P, V77I, I93L	B
	DB_SI7123-04	SI7123-04	AJ971284	None		I13V, I15V, K43R, I62V, L63P, I64IV, V77I, I93L	B
Jayaraman (2006)	2-00-0492	2-00-0492		None		M36I, N37D, R41K, K43R, L63P, H69Y, I72V, Q92K	B
	2-00-0670a	2-00-0670a		None		E35D, N37E, R41K, K43R, L63P, R87G, Q92K	B
	2-01-0117	2-01-0117		None		T12K, K14R, E35D, N37S, R41K, K43R, I62V, L63P, A71V, V77I, I93L	B
	2-01-0118	2-01-0118		None		T12S, E35D, N37D, K43R, R57K, D60E, L63P, A71T	B
Lama (2006)	Pt1457	1457		None		T12S, L19Q, E35D, R41K, K43R, L63P	B
	Pt3015	3015		None		L19Q, K43R, Q61E, L63P, E65D, V77I, I93L	B
	Pt3183	3183		None		T4D, E35ED, K43R, L63AT, V82VI	B
	Pt3263	3263		None		T4S, G16E, N37D, K43R, L63T, H69HR, I72T, Q92K	B
	Pt4543	4543		None		K14KR, R41K, K43R, I62IV, L63P, A71AT, I72V, I93L	B
	Pt5034	5034		None		T12S, L19Q, R41K, K43R, L63P, I93L	B
	Pt5207	5207		None		L10I, V11T, L19I, K43R, Q61E, I62V, L63P, I64L, A71V, I72M, V77I, P79H, I93L	B
	Pt6030	6030		None		L10V, K14KR, L19LI, K43R, T74A, L89M	B
	Pt6162	6162		None		L10V, K43R, V77I, L89M	B
	Pt6171	6171		None		L10V, K43R, Q61E, L63P, V77I, L89M	B
Lindstrom (2006)	SIIDC0261	SIIDC0261		None		T12S, L19V, E35D, P39T, K43R, R57K, L63P, V82I, I93L	B
	SIIDC0156	SIIDC0156		None		R41K, K43R, R57K, I62V, L63S, A71T, I93L	B
Pando (2006)	05AR163052	05AR163052	DQ383755	None		I15V, E35D, M36I, R41K, K43R, R57K, Q61N	B
Rhee (2006)	CA8092	CA20637		None		I15V, L19T, K43R, H69Y	B
Valle-Bahena (2006)	RT-40	PROT-RT-40	DQ150711	None		Q18L, K43R, R57K, I64V	B
	RT-57	PROT-RT-57	DQ150723	None		T12P, K14R, P39Q, R41K, K43R, L63P, A71T, V77I, I93L	B
Andresen (2007)	CTL 023	CTL 023	EF514707	None		T12S, E35D, K43R, Q61E, I62V, L63P, I93L	B
Brumme (2007)	1170	PR_1170	EF368480	None		K43R, L63S, V77I	B
	1181	PR_1181	EF368491	None		R41K, K43R, L63P, V77I, I93L	B
	1191	PR_1191	EF368501	None		N37E, K43R, R57K, L63P, A71AT, I93L	B
	1223	PR_1223	EF368533	None		E35D, R41K, K43R, L63P, A71V, V77VI, I93L	B
	1386	PRRT_1386	EF368696	None		I15V, N37S, R41K, K43R, L63Q, I93L	B
	1399	PRRT_1399	EF368709	None		T12E, K43R, L63P, I93L	B
	1597	PRRT_1597	EF368907	None	L10F	T12P, K14R, P39S, R41K, W42W*, K43R, L63P, V77I, I93L	B
	1804	PRRT_1804	EF369114	None		K14KR, K43R, I62V, L63P, V77I, I93L	B
	1827	PRRT_1827	EF369137	None		R41K, K43R, I62IV, L63P, A71T, I72V, V77I, I93L	B
	1852	PRRT_1852	EF369162	None		K43R, I62V, L63P, V77I, I93L	B
Dilernia (2007)	F162	F162	EF120150	None		T12P, K14R, N37D, K43R, L63P, C67E, A71V, I72T, V77I, I93L	B
	F280	F280	EF120209	None		T12V, K14R, N37D, K43R, R57K, Q61N, L63T, G68E, A71V, I72T, V77I, I93L	B
	F361	F361	EF120248	None		T12TA, I15V, L19I, M36I, N37D, R41K, K43R, L63S, I93L	B
	N69	N69	EF120322	None		T12P, I15V, L19I, K43R, L63P, K70E, A71T, I72Q, I93L	B
Eyer-Silva (2007)	BRSQ87	06BRSQ87	EF042683	None		I15V, M36I, K43R, I62V, L63S	B
	BRSQ94	06BRSQ94	EF042690	None		K43R, L63P, V77I, I93L	B
Gatanaga (2007)	C03-51110036-1	C03-51110036-1	AB640136	None		T12P, I15V, L19I, N37D, K43R, L63H, A71T, V77I, I93L	B
	C04-51110148-1	C04-51110148-1	AB640248	None		T12P, I15V, L19I, N37D, K43R, L63H, A71T, I72V, V77I, I93L	B
	C04-51110186-1	C04-51110186-1	AB640286	None		T12I, N37E, K43R, L63P, H69K, V77I	B
Gonsalez (2007)	03	HIV_03	GU288813	None		T12AE, L19EV, K43R, L63P	B
	26	HIV_26	GU288810	None		I15V, E35ED, M36I, N37ND, R41K, K43R, D60E, Q61E, L63P	B
Holguin (2007)	609085	609085	EF583250	None		I3V, L10I, K43R, I62V, L63A, A71V, V77I, I93L	B
Lin (2007)	4V33	4V33	EF078137	None		K14R, I15V, R41K, K43R, L63T, I64L, I72V	B
	4V75	4V75	EF078153	None	V32L	K14R, I15V, A22V, R41K, K43R, Q58R, L63T, I64L, I72V	B
	4V85	4V85	EF078157	None		I13V, K14R, I15V, R41K, K43R, K55I, L63T, I64L, Q92H	B
	4V197	4V197	EF078203	None		K14R, I15V, L24*, R41K, K43R, L63P	B
	4V115	4V115	EF078249	None		I13V, K14R, I15V, R41K, K43R, L63P	B
	4v341	4v341	EF078260	None		I13V, K14R, I15V, R41K, K43R, L63P, I64L	B
Liu (2007)	AH051	AH051	EU079093	None		T12TA, K43R, I62V, L63P, I72V, V77I, I93L	B
	63513	63513	EU079115	None		E35ED, R41RK, K43R, I62V, L63P, A71T, V77VI, I93L	B
Parker (2007)	RV0047	RV0047	AY701362	None		Q18L, N37S, K43R, L63P	B
Sanchez Onoro (2007)	609085	609085		None		I3V, L10I, K43R, I62V, L63A, A71V, V77I, I93L	B
Varella (2007)	23ini	23ini		None		M36I, N37D, K43R, R57K, L63P, V82I, I93L	B
von Wyl (2007)	45	5933490	EF449804	None		I15V, M36I, K43R, I62V, L63P	B
	98	5257845	EF449938	None		I15V, K43R, I62V, L63P, H69N	B
	54	7206799	EF450001	None		I13V, E35D, N37H, R41K, K43R, R57K, I62V, L63P, A71T, I93L	B
		661753	EF449812	None		I13V, E35D, N37H, R41K, K43R, R57K, I62V, L63P, A71T, I93L	B
Chang (2008)	TW4379	TW4379	EU164903	None		K43R, I62V, L63P, A71V, I72A, I93L	B
	TW0090a	TW0090a		None		L19I, E35D, K43R, L63P, A71V, V77I, I93L	B
	TW0299a	TW0299a		None		I13V, K14R, I15V, R41K, K43R, L63P, I64L	B
	TW0300a	TW0300a		None		R41K, K43R, L63P, I64L	B
	TW0420a	TW0420a		None		E35D, P39Q, K43R, L63PS, A71V, I93L	B
	TW8378a	TW8378a		None		K14R, I15V, R41K, K43R, L63P, I64L	B
	TW8390a	TW8390a		None		I13V, K14R, I15V, R41K, K43R, L63P, I64L	B
	TW10143a	TW10143a		None		E35D, R41K, K43R, L63P, K70I, A71V, I72T, I93L	B
	TW9738a	TW9738a		None		I13V, K14R, I15V, R41K, K43R, L63P	B
	TW9778a	TW9778a		None		L19I, E35D, K43R, L63P, A71V, V77I, I93L	B
	TW9962a	TW9962a		None		I13V, K14R, I15V, R41K, K43R, L63P	B
	TW7783a	TW7783a		None		L5F, K14R, I15V, R41K, K43R, L63T, I64L, I72V	B
	TW4437a	TW4437a		None		E35D, K43R, L63P, A71V, V77I, I93L	B
	TW7632b	TW7632b		None		T12P, I15V, R41K, K43R, L63P	B
	TW7982a	TW7982a		None		I13V, I15V, R41K, K43R, L63P	B
	TW8470a	TW8470a		None		I13V, E35E_D, M36I, R41K, K43R, R57K, I62V, L63P, E65D, I72V	B
	TW8555a	TW8555a		None		I13V, I15V, R41K, K43R, L63P	B
	TW0601a	TW0601a		None		K14R, I15V, R41K, K43R, L63A	B
	TW0933a	TW0933a		None		K14R, R41K, K43R, R57K, L63P, I64L, V77I	B
	TW1191a	TW1191a		None		E35ED, M36MI, R41K, K43R, L63P, I93L	B
	TW11928a	TW11928a		None		K14R, I15V, R41K, K43R, L63P, I64L	B
	TW5393a	TW5393a		None		I3N, T12S, E35D, R41K, K43R, L63P, H69Q, K70T, A71V, I72T, P79L, I93L	B
	TW1891a	TW1891a		None		K14R, I15V, R41K, K43R, L63P, H69Q	B
Ferreira (2008)	46	BR06PR46	EU340734	None		E35D, N37D, K43R, R57K, L63P, K70R, A71T, V77I	B
Holguin (2008)	SP15-248266	SP15-248266	EU255318	None		L19T, R41K, K43R, L63P, I72IT, V77I, I93L	B
	SP16-249115	SP16-249115	EU255319	None		K43R, R57K, L63P, V77I, I93L	B
	SP40-276556	SP40-276556	EU255343	None		K43R, L63P, H69Q, V77VI	B
	SP108-321619	SP108-321619	EU255454	None		T12P, I13V, K14R, K20R, N37T, K43R, I62V, L63P, I64V, C67W	B
	SP6-344898	SP6-344898	EU255491	None		I13V, K14R, R41K, K43R, L63P	B
Ibe (2008)	212	212	AB356243	None		T12A, K14R, E35D, K43R, L63P, A71V, V77I, I93L	B
	318	318	AB356319	None		L10IV, I13V, E35D, M36I, K43R, L63P, I72IT, L89M	B
	366	366	AB356357	None		K14KR, I15V, N37D, K43R, I62IV, L63P, A71T, V77I, I93L	B
	570	570	AB356494	None		N37S, R41K, K43R, Q61H, V77I	B
Lloyd (2008)	CR102	03HN_CR102	EU312700	None		R41K, K43R, L63P, A71V, I72M, V77I, I93L	B
	CR026	03HN_CR026	EU312732	None		N37Q, R41K, K43R, L63Q, I64V, I72M	B
	CR128	03HN_CR128	EU312748	None		T12S, L19T, K43R, L63P, I64V, I93L	B
	TX023	03HN_TX023	EU312792	None		I15V, K43R, Q61H, L63T, G68E, H69K, A71V, I72T, I93L	B
	TX074	03HN_TX074	EU312816	None		T12N, L19I, K43R, I62V, L63P, I72IV, V77I, I93L	B
	TX079	03HN_TX079	EU312820	None		R41K, K43R, L63P, I64L, V77I, I93L	B
	TX086	03HN_TX086	EU312865	None		L10LI, I13IV, N37D, R41RK, K43R, L63P, I64V, A71AT, I72IV, Q92R	B
	TX161	03HN_TX161	EU312899	None		I15V, L19I, E35D, N37S, R41K, K43R, L63P, A71AT, I72E, I93L	B
	TX226	03HN_TX226	EU312949	None		I15V, K43R, L63T, G68E, H69K, A71V, I72T, I93L	B
McConnell (2008)	NV07	NV07	EU288092	None		I15L, E35D, N37D, K43R, L63P, H69P, A71V, V77I, P79T	B
	NV51	NV51	EU288136	None		W6WL, I13V, K14R, R41K, K43R, L63P	B
Miura (2008)	BEC13	BEC13	EU517901	None		K14R, M36I, N37D, K43R	B
	BEC24	BEC24	EU517903	None		G16A, R41K, K43R, H69Q	B
	BEC71	BEC71	EU517925	None	G48R	K20R, M36I, N37D, K43R, R57K, L63P, H69Q	B
Palacios (2008)	12445	12445		None		T12A, I13V, K14R, I15V, E35ED, N37D, K43R, Q61E, L63P	B
	12601	12601		None		M36MI, K43R, I62V, L63P, I93L	B
	12793	12793		None		G16R, E35D, M36I, N37D, K43R, I62V, L63P, I64L, I72V, Q92K	B
	12824	12824		None		W6WG, E35D, M36I, N37D, K43R, I62V, L63P, I64L, I72V, Q92K	B
	12908	12908		None		L10I, I13V, G16E, M36I, K43R, D60E, Q61G, L63T, C67E, H69K	B
	41076	41076		None		E35D, M36I, N37S, K43R, I62V, L63P, I64L, I72V, Q92K	B
	41182	41182		None		E35D, M36I, N37D, K43R, I62V, L63P, I64L, I72V, Q92K	B
Riddler (2008)	RG42767	RG42767w0		None	D30DV	K14R, L19I, A22AV, D29DEV, E35D, N37D, K43R, R57K, Q61E, L63P, A71T, I72T, V77I, I93L	B
Rosen-Zvi (2008)	52	00p52-1		None		L10I, E35D, K43R, R57RK, L63PT, I64V, E65D	B
Sirivichayakul (2008)	BED-20	BED-20Pr	JQ364276	None		T4N, E35D, N37D, K43R, R57K, D60E, L63P	B
Wang (2008)	CYM019	CYM019	EU921967	None		N37S, K43R, L63P	B
Ayouba (2009)	2893	2893HALDPR	GQ351961	None		I13V, K14R, G16E, K20I, M36I, P39PL, R41K, K43R, L63H, H69K, L89I	B
Brennan (2009)	A5	ARC-A5	EU711451	None		K43R, V77I, I93L	B
Brown (2009)	CAS_184_11_150004	CAS_184_11_150004	FJ030721	None		M36I, N37D, K43R, I62V, L63P, V77I, I93L	B
	CAS_392_3_1753	CAS_392_3_1753	FJ030757	None		L10I, T12P, I13V, M36I, N37D, K43R, I62V, L63P, H69N, A71T, I93L	B
	CAS_807_16_36367	CAS_807_16_36367	FJ030798	None		T4TP, V11D, I15V, E35D, N37D, K43R, R57K, D60E, L63P, I93L	B
	CAS_796_16_36464	CAS_796_16_36464	FJ030796	None		L10I, K43R, R57K, L63P, C67S, I93L	B
	CAS_690_16_13011	CAS_690_16_13011	FJ030778	None		K43R, Q61G, L63S, V77I, I93L	B
	CAS_830_16_32013	CAS_830_16_32013	FJ030801	None		K43R, R57RK, I62IV, L63P, V77VI, I93L	B
	CAS_1087_16_20034	CAS_1087_16_20034	FJ030652	None		L33V, E35D, K43R, L63P	B
	CAS_115_1_7573	CAS_115_1_7573	FJ030657	None		K14M, L19Q, E35D, N37D, K43R, L63P, A71T, V77I	B
	CAS_365_3_1615	CAS_365_3_1615	FJ030751	None		R41K, K43R, L63P, I93L	B
	CAS_1052_16_13012	CAS_1052_16_13012	FJ030646	None		K43R, Q61E, L63P, I64L, V77I, I93L	B
Brumme (2009)	A3533	A3533	GQ371773	None		K43R, L63P, V77I, Q92QE, I93IL	B
	A3546	A3546	GQ371774	None		K14R, L19I, E35D, N37D, K43R, R57K, Q61E, L63P, A71T, I72T, V77I, I93L	B
	D7515	D7515	GQ371829	None		K43R, I62V, L63P, I72IM, V77I, I93L	B
	M1546	M1546	GQ372004	None		N37D, R41K, K43R, L63P, H69Q, A71T, I72V, V77I, I93L	B
	W0546	W0546	GQ372221	None		K43R, I62V, L63P, V77I, I93L	B
	X2519	X2519	GQ372251	None		K43R, I62V, L63P, I93L	B
	Y7519	Y7519	GQ372288	None		I15V, E35D, R41K, K43R, L63P, I72V, I93L	B
	PRRT_4058	PRRT_4058	GQ303747	None		T12P, K14R, E35D, N37ST, R41K, K43R, L63P, C67S, A71V, I72IV, V77I, I93L	B
Cardoso (2009)	BRGO3012	BRGO3012	FJ548796	None		I15V, N37S, R41K, K43R, L63LP	B
	BRGO3037	BRGO3037	FJ548814	None		T12P, N37D, K43R, L63P, C67S	B
	BRGO3040	BRGO3040	FJ548816	None		L19T, E35D, N37D, R41K, K43R, I62V, L63A, A71T, I93L	B
	BRGO3052	BRGO3052	FJ594129	None		I13V, E35ED, K43R, I62V, L63P, A71V, V77I, I93L	B
	BRGO3057	BRGO3057	FJ594133	None		E35D, N37S, K43R, I62V, L63H, I72V	B
	BRGO3155	BRGO3155	FJ594184	None		K43R, L63P, I64V, I72L, V77I	B
Castillo (2009)	49	49PROT	GQ202925	None		K43R, R57K, L63T, K70R, A71V, I72E, I93L	B
	15	15PROT	GQ202963	None	Q58E	L10V, I15V, E35D, M36I, K43R, Q61E, I62V, L63P, I72T	B
	58	58PROT	GQ202973	None		I13V, K43R, D60E, L63P, V77I	B
Cuevas (2009)	P1073	P1073.1	EU822551	None		M36T, R41K, K43R, I62V, L63P, I72V	B
	P1485	P1485.1	EU822673	None		M36I, N37E, K43R, I62V, L63H, C67S, I72V	B
	P1536	P1536.1	EU822694	None		T12TS, R41K, K43R, I62V, L63P, I93L	B
	P1595	P1595.1	EU822708	None		K14R, K43R, L63P, V77I, I93L	B
	P1628	P1628.1	EU822722	None		K14R, K43R, L63P, V77I, I93L	B
	P1629	P1629.1	EU822723	None		K14R, K43R, L63P, V77I, I93L	B
	P1694	P1694.1	EU822747	None		K14R, K43R, L63P, V77I, I93L	B
Fujisaki (2009)	602	602	AB442268	None		T12A, K14R, I15V, N37S, R41K, K43R, I64V	B
	619	619	AB442283	None		T12TA, I15V, M36I, N37S, K43R, R57K, Q61K, I64V	B
Lee (2009)	S07010	S07010	EU715216	None		T4S, E35D, K43R, L63P, I93L	B
	S07044	S07044	EU715217	None		T4S, E35D, K43R, L63P, I93L	B
	S07051	S07051	EU715224	None		T4S, I15IV, E35D, K43R, L63P, I93L	B
	S07021	S07021	EU715227	None		T4TS, E35D, K43R, L63P, I93L	B
Luo (2009)	sz.794	05HBsz.794	FJ375045	None		R41K, K43R, I62V, L63S, A71V, I72V, V77I, I93L	B
	xf.815	05HBxf.815	FJ375046	None		E35D, K43R, R57K, L63P, A71V, I72V, V77I, I93L	B
	wh.837	05HBwh.837	FJ375055	None		E35D, K43R, R57K, L63P, A71V, I72V, V77I, I93L	B
	xs.1386	05HBxs.1386	FJ375088	None		R41K, K43R, L63P, A71V, I72E, V77I, I93L	B
	xs.1755	06HBxs.1755	FJ375093	None		R41K, K43R, L63P, A71V, I72E, V77I, I93L	B
Rhee (2009)	CA16533	CA39253	FJ983431	None		K43R, L63P, V77I, I93L	B
	CA22088	CA51084	FJ983492	None		E35D, N37D, K43R, R57K, L63P, A71T, I93L	B
Smith (2009)	PI68	US2002PI68		None		L10I, R41K, K43R, I62V, L63HP, I93L	B
	PI91	US2001PI91		None		T12AE, K14KR, R41K, K43R, D60E, L63P, I64V	B
	PI168	US2004PI168		None		I13V, K14R, N37D, K43R, D60E, Q61E, L63P, V77I, I93L	B
	CR29	US2006CR29		None		I13IV, E34EG, M36I, N37D, R41RK, K43R, L63P, I93L	B
	CR36	US2007CR36		None		L10I, T12TA, L19I, N37D, K43R, D60E, L63HPQ, I64V, E65ED, V77VI, I93L	B
	CR121	US2006CR121		None		L10I, I13V, R41K, K43R, I62IV, I64V, A71T	B
Tu (2009)	19	PBMC19	EU518266	None		L10I, G16E, P39S, R41K, K43R, D60E, L63P, I93L	B
		plasma19	EU518315	None		L10I, G16E, P39S, R41K, K43R, D60E, L63P, I93L	B
Vercauteren (2009)	pt2135	435864864	GQ398889	None		N37D, K43R, L63T, E65D, V77I	B
	pt2112	623702112	GQ398912	None		R41K, K43R, L63P, I93L	B
	pt2052	968207955	GQ398972	None		T12P, R41K, K43R, L63P, C67HY, V77I, I93L	B
	pt2011	1269482828	GQ399013	None		R41K, K43R, I64V, H69Y, V77VI, I93IL	B
	pt1865	2070384117	GQ399159	None		T12P, K14R, E35D, N37D, K43R, D60DE, Q61QH, I62V, L63LP, K70E, A71T, I72R, V77I, V82VI, I93IL	B
	pt1815	2424120652	GQ399209	None		I15V, G16A, N37D, K43R, L63S, I72IT, V77VI	B
	pt1792	2539542397	GQ399232	None		N37NST, R41K, K43R, I93L	B
	pt1736	2996496661	GQ399288	None	I84IM	M36I, P39PS, R41K, K43R, I62V, L63P, V77I, I93L	B
	pt1670	3326011375	GQ399354	None		M36I, K43R, H69K, I93L	B
	pt1655	3414523311	GQ399369	None		E35D, K43R, Q61E, L63P, C67Y, H69R, V77I, I93L	B
	pt1635	3570823591	GQ399389	None		L10LI, G16E, P39S, K43R, R57K, L63P, A71AITV, I93L	B
	pt1608	3689178756	GQ399416	None		T12A, L19I, E35D, N37D, K43R, I62V, L63P, A71T, V77I, I93L	B
	pt1605	3702260511	GQ399419	None		Q2QR, N37NS, R41K, K43R, R57K, L63P, V77VI, I93L	B
	pt1492	4320550560	GQ399532	None		T12A, I13V, N37T, K43R, L63P	B
	pt1389	4915993745	GQ399635	None		N37S, R41K, K43R, R57K, V77I, I93L	B
	pt1318	5284185534	GQ399706	None		E35D, K43R, L63P, A71V, V77I, I93L	B
	pt1299	5421979772	GQ399725	None		L19I, E35D, N37NS, R41K, K43R, I62V, L63H, H69N, A71V, I93L	B
	pt1105	6567446849	GQ399919	None		I15V, E35D, K43R, I62V, L63P, H69N, V77I	B
	pt1083	6703446591	GQ399941	None		K43R, L63P, E65D, V77I	B
	pt1067	6853865496	GQ399957	None	D30DY	L10I, I13V, K14KN, E35D, N37D, K43R, D60E, L63T, I72V	B
	pt1025	7040066937	GQ399999	None		N37A, K43R, K45KE, L63P, H69Q, I72V, L90LV	B
	pt995	7247638506	GQ400029	None		I13V, I15IV, K43R, R57K, I62V, L63P, V77I, I93L	B
	pt989	7330926564	GQ400035	None		T12P, E35D, N37D, K43R, L63S, I64L, V77I, I93L	B
	pt859	8000241555	GQ400165	None		T12A, K14KR, N37T, R41K, K43R, I62V, L63P, V77I, I93L	B
	pt855	8039756639	GQ400169	None		K14R, E35D, N37D, K43R, I62V, L63P, V82I, I93L	B
	pt779	8499411599	GQ400245	None		R41K, K43R, R57K, L63P, I93L	B
	pt604	9371149357	GQ400420	None		I13V, I15V, K43R, R57K, L63S, I64V, V77I	B
	pt515	9808209086	GQ400509	None		I13V, N37A, K43R, L63P	B
	pt489	9fBPfEqQR3	GQ400535	None		R41K, K43R, A71T, V77I	B
	pt475	aadaqilVTT	GQ400549	None		T12P, R41K, K43R, I62V, L63P, C67D	B
	pt447	CiiWOPNoos	GQ400577	None		T12A, E35D, N37D, R41K, K43R, I62V, L63P, I93L	B
	pt404	fIDWdDhLUf	GQ400620	None		L10N, M36MI, K43R, I62V, L63P, A71V, V77I, I93L	B
	pt396	FvjpxR7HLS	GQ400628	None		N37D, K43R, L63T, A71V, I93L	B
	pt376	GSMcCTeEnp	GQ400648	None		I13V, I15V, E35Q, N37D, K43R, L63A	B
	pt367	HCDgdo0dEC	GQ400657	None		I13V, M36MV, N37NS, P39Q, K43R, R57K, L63T, I64L, A71V, I93L	B
	pt294	ldkHVpDutq	GQ400730	None		L10V, T12S, L19I, E35ED, K43R, L63P	B
	pt259	MwPhZVtqhb	GQ400765	None		E35ED, N37NS, K43R, R57RK, Q61E, I62IV, L63P, I64M, I72V, I93L	B
	pt189	Q1hPK6fWjc	GQ400835	None		T12A, L33V, R41K, K43R, R57K, L63S, A71V, I93L	B
	pt181	qEmiBj4n59	GQ400843	None		K43R, R57K, I62V, L63P, I93L	B
	pt143	sdrDh2aZTg	GQ400881	None		R41K, K43R, I62V, L63P, C67W, K70Q, V77I, I93L	B
	pt105	UKQmYyTrsh	GQ400919	None		L10I, K43R, I62V, L63P, A71T, V77I, I93L	B
	pt69	wChY8zk6C1	GQ400955	None		L19LI, E35D, N37E, R41K, K43R, I62V, L63P, I93L	B
	pt11	ZMjhp4I88p	GQ401013	None		E35EAKT, N37E, R41KN, K43R, L63P, I93L	B
	pt10	zmm78wIVKt	GQ401014	None		T12TA, L33V, R41K, K43R, R57K, L63S, A71V, I93L	B
Arruda (2010)	1021	16CE081021	JQ230594	None		I13V, K14KR, M36I, K43R, R57K, I62V, L63P	B
	1023	16CE081023	JQ230598	None		I15V, L19T, M36I, K43R, I62V, L63H, H69Q, I72V	B
	1067	16CE091067	JQ230660	None		L19V, M36L, N37S, K43R, R57K, I62V, L63P, I72L	B
	1108	16CE091108R	JQ230686	None		L19V, M36L, N37S, K43R, R57K, I62V, L63P, I72L	B
Brennan (2010)	Pat143	ARC-A87	JN697236	None		I15V, K43R, I62V, L63AP, I64IL, A71T, V77I, I93L	B
	Pat110	ARC-A121	JN697269	None		K43R, L63T, V77I, I93L	B
	Pat073	ARC-A165	JN697306	None		L10LI, Q18H, R41K, K43R, L63S, I72V, I93L	B
	Pat053	ARC-A184	JN697326	None		E35D, N37D, K43R, L63Q, I64V, V77I, I93L	B
	Pat050	ARC-A187	JN697329	None		N37D, K43R, R57K, D60E, I62V, L63P, V77I, I93L	B
	ARC-A230	ARC-A230	GU565679	None		E35D, N37D, K43R, I62IV, L63P, I93L	B
Chin (2010)	C007	C007	GQ290699	None		R41K, K43R, L63P, I72V, V77I, I93L	B
Ragonnet-Cronin (2010)	PHAC_014	PHAC_014	HM468512	None		L10I, R41K, K43R, I62V, L63T, I93L	B
	PHAC_064	PHAC_064	HM468562	None		I15V, N37I, K43R, R57K, L63P, I93L	B
	PHAC_164	PHAC_164	HM468662	None		T12E, L19IV, K20KR, P39PQ, K43R, L63P, V77I, I93L	B
	PHAC_212	PHAC_212	HM468710	None		K43R, R57K, Q61D, I62V, L63P, V77I, I93L	B
	PHAC_234	PHAC_234	HM468732	None		K14KR, N37E, K43R, R57K, L63P, A71AT, I93L	B
	PHAC_284	PHAC_284	HM468782	None		T4TP, L5LF, T12S, E35D, N37D, K43R, R57K, D60E, L63P, A71T, I93L	B
	PHAC_285	PHAC_285	HM468783	None		N37E, K43R, R57K, L63P, I93L	B
	PHAC_304	PHAC_304	HM468802	None		K14KR, I15V, K43R, R57K, I62IV, L63P, G68DE, A71V, I72IV, V77VI, I93L	B
	PHAC_333	PHAC_333	HM468831	None		N37T, K43R, R57K, L63P, V77VI	B
	PHAC_389	PHAC_389	HM468887	None		E35D, N37D, K43R, I62V, L63P, I93L	B
	PHAC_394	PHAC_394	HM468892	None		T4S, K14KR, I15V, L19V, M36MI, R41RK, K43R, I62V, L63P, I93L	B
	PHAC_430	PHAC_430	HM468928	None		N37E, K43R, R57K, L63P, I93L	B
	PHAC_441	PHAC_441	HM468939	None		T12AS, E35D, N37D, K43R, D60E, L63P	B
	PHAC_445	PHAC_445	HM468943	None		K20N, K43R, I62V, L63P, V77I, I93L	B
	PHAC_489	PHAC_489	HM468987	None		L10LI, I13V, N37NY, K43R, L63P, I64V, V77VI, T91TA, I93IL	B
	PHAC_587	PHAC_587	HM469085	None		E35Q, N37E, R41K, K43R, R57K, L63P, A71T, I93L	B
	PHAC_590	PHAC_590	HM469088	None		I13V, I15V, K43R, L63P, I64V, V77I, Q92K	B
	PHAC_606	PHAC_606	HM469104	None		K43R, I62V, L63P, A71T, V77I, I93L	B
	PHAC_652	PHAC_652	HM469150	None		E35D, N37E, K43R, R57K, L63P, I93L	B
	PHAC_673	PHAC_673	HM469171	None		L10LI, I15V, N37S, K43R, R57K, L63P, I93L	B
	PHAC_695	PHAC_695	HM469193	None		N37ST, K43R, R57K, I62V, L63P, V77I, I93L	B
	PHAC_727	PHAC_727	HM469225	None		L5LV, L19T, M36MI, K43R, L63P, H69Q, I72M, V77I, G86GE, I93L	B
	PHAC_743	PHAC_743	HM469241	None		I15V, Q18QDEH, L19X, N37I, K43R, R57K, I62IV, L63P, V77VI, I93L	B
	PHAC_764	PHAC_764	HM469262	None		N37E, K43R, R57K, L63P, I93L	B
	PHAC_775	PHAC_775	HM469273	None		K43R, I62V, L63P, A71T, V77I, I93L	B
	PHAC_801	PHAC_801	HM469299	None		I13V, N37S, K43R, Q61E, L63P, V77I, I93L	B
	PHAC_835	PHAC_835	HM469333	None		N37E, K43R, R57K, L63P, V82VI, I93L	B
	PHAC_854	PHAC_854	HM469352	None		K43R, L63P, V77I, I93L	B
von Wyl (2010)	1506769	1506769	GQ848110	None		I3IN, L5LF, A22AV, K43R, L63LP, H69K, A71T, V77I, I93LV	B
Yebra (2010)	256085	05SP0256085	FJ481777	None		E35D, K43R, R57K, D60E, L63P, A71V, V77I, L89M, I93L	B
	207841	04SP0207841	FJ481807	None		I15V, K43R, I62V, L63P, A71T, I72E, V77I, I93L	B
	321472	06SP0321472	FJ481851	None		E35D, K43R, R57K, L63P, V77I, I93L	B
Carvalho (2011)	O40-43	O40-43	GU214081	None		I13V, K14KR, K43R	B
Chibo (2011)	S10	S10	JF895197	None		K43R, L63S	B
	S30	S30	JF895217	None		K14R, R41K, K43R, I62V, L63P, V77I, I93L	B
	S31	S31	JF895218	None		E35D, N37E, K43R, I62V, L63Q, H69F, A71V, I72T, T74A, V77I, R87RK, I93L	B
	S128	S128	JF895315	None		L19Q, E35D, N37V, K43R, R57K, L63P, K70R, I93L	B
Ferreira (2011)	BRMT512	BRMT512	HQ638761	None		T12K, I13V, I15V, L19Q, M36I, R41K, K43R, R57K, Q61N, L63PS	B
	BRMT2171	BRMT2171	HQ638788	None		I15V, L19T, E35ED, K43R, L63P, H69K, I93L	B
Kao (2011)	Pat374	21676	HQ657666	None		R41K, K43R, L63P, V77I, I93L	B
	Pat363	26290	HQ657677	None		K14R, I15V, R41K, K43R, L63P, H69Q	B
	Pat317	26927	HQ657723	None		I13IV, I15V, R41K, K43R, I62V, L63PST, I64ILV, V77VI	B
	Pat314	26934	HQ657726	None		L10LI, L24LM, N37D, K43R, L63P, K70KR, I72IM	B
	Pat271	27068	HQ657769	None		E35D, P39Q, K43R, L63P, I64M, A71V, I72V, V77I, I93L	B
	Pat230	27945	HQ657810	None		L10I, I13V, K14R, K43R, L63P, H69Y, K70T	B
	Pat196	28776	HQ657844	None		L19LV, E35D, P39Q, K43R, L63P, I64M, A71V, I72V, V77I, I93L	B
	Pat126	36320	HQ657914	None		K14R, I15V, R41K, K43R, L63P	B
	Pat097	36509	HQ657943	None		I13V, N37D, K43R, L63P	B
	Pat078	36537	HQ657962	None		I13V, K14KR, I15V, L19LV, R41K, K43R, L63P, I64IL	B
	Pat070	36548	HQ657970	None		N37D, K43R, L63P	B
	Pat067	36551	HQ657973	None		K14R, I15V, R41K, K43R, L63S, I93L	B
	Pat028	38629	HQ658012	None		K14KR, I15V, R41K, K43R, L63P, I64L, K70KR	B
	Pat021	39570	HQ658019	None		K14R, I15V, R41K, K43R, L63A	B
Ng (2011)	FREE011	FREE011	HQ539012	None		T4S, E35D, K43R, L63P, I93L	B
	HM056	HM056	HQ539089	None		T4S, E35D, K43R, L63P, I93L	B
	HM088	HM088	HQ539116	None		T4S, E35D, K43R, L63P, I93L	B
	HM147	HM147	HQ539172	None		K43R, R57K, L63P, A71V, I93L	B
Rolland (2011)	0524	consensus_0524	JF320008	None		L10V, T12P, K14R, I15V, R41K, K43R, L63T, A71T, I72T, V82I, I93L	B
	0053	consensus_0053	JF320615	None		R41K, K43R, L63P, V77I	B
Su (2011)	LZ2114	LZ2114	HQ588286	None		E35D, R41K, K43R, D60E, L63P	B
Truong (2011)	06000039	06000039		None		K43R, R57K, L63P, L89LM, I93IL	B
	06003490	06003490		None		L10IV, M36I, K43R, Q61E, I62V, L63P, I85IV, I93L	B
	05000485	05000485		None		K43R, I62V, L63P, V77I, I93L	B
	06001989	06001989		None		E35D, N37D, R41K, K43R, L63P	B
	06002333	06002333		None		T12S, K20R, K43R, R57RK, L63P, A71V, V77I, I93L	B
	06002581	06002581		None		K14R, E35D, M36I, K43R, R57K, Q61E, I62V, L63P, I93L	B
	06003012	06003012		None		E35D, N37D, R41K, K43R, L63P	B
	06003014	06003014		None		K14R, I15V, K43R, I62V, L63S, I72V, I93L	B
	05001095	05001095		None		T12S, L19I, E35ED, R41RK, K43R, I64V, V77I	B
	05002254	05002254		None		K43R, I62V, L63P, I72T, V77I, I93L	B
	05002530	05002530		None		K43R, I62V, L63P, V77I, I93L	B
Ye (2011)	BJ07271	BJ07271	JF906601	None		T12P, L19V, R41K, K43R, L63P, A71T, I72V, V77I, I93L	B
	BJ07566	BJ07566	JF906677	None		E35D, R41RK, K43R, D60DE, L63P, I72V, V77VI, I93L	B
Avila-Rios (2012)	JY00M68ES7	JY00M68ES7	KC169153	None		N37ND, K43R, L63P, I72V	B
	M000F95KVF	M000F95KVF	KC169161	None		T12S, I15IV, N37ND, K43R, D60E, L63P, I93L	B
	M000FC4NSJ	M000FC4NSJ	KC169165	None		R41K, K43R, I62V, L63P, V77I, I93L	B
	M000FE2QSN	M000FE2QSN	KC169169	None		T12I, R41K, K43R, I62IV, L63P, I93L	B
	M000MB8IFQ	M000MB8IFQ	KC169208	None		N37NS, R41K, K43R, L63P, V77I, I93L	B
	C280F9DKR2	C280F9DKR2	KC168216	None		K14R, R41K, K43R, K55R, L63T, G68E, A71V, I72T, V77I	B
	MX00MM6MUQ	MX00MM6MUQ	KC169316	None		L19Q, K43R, L63P, I64IM	B
	O000M69GU4	O000M69GU4	KC169402	None		I13V, R41K, K43R, L63P, I64V, K70R, V77I, Q92K	B
	O000M87IWI	O000M87IWI	KC169416	None		K43R, I62IV, L63P, V77I, I93L	B
	O200MI2_LT	O200MI2_LT	KC169463	None		L38I, K43R, R57K, I62V, L63A, I64M, A71V, I72E, V77I, I93L	B
	P000MA1JVG	P000MA1JVG	KC169521	None		L19Q, K43R, R57K, L63P, I72V, V77I, I93L	B
	P100MD2OX1	P100MD2OX1	KC169542	None		I13V, K43R, R57K, I62V, L63T, A71T, I72X, I93L	B
	P1C0ME3MJ5	P1C0ME3MJ5	KC169546	None		N37D, K43R, D60E, Q61E, I62V, L63P, C67CY, A71T, I72T, V77I, I93L	B
	P200M47FVF	P200M47FVF	KC169556	None		Q2X, I3V, Q7R, T12P, L19I, R41I, K43R, I62V, L63T, A71V, T74I, I93L	B
	SCEUMG4BTC	SCEUMG4BTC	KC169624	None		L10I, I15V, R41K, K43R, L63P, C67S	B
	U200M87KSG	U200M87KSG	KC169628	None		E35D, N37S, R41K, K43R, K45K*, I62V, L63APS, A71V, I93L	B
	V000MD4QTT	V000MD4QTT	KC169676	None		K20KR, M36I, N37D, K43R, R57K, Q61H, L63LP, I64M, I72V, L89LM	B
	V000ML1TT5	V000ML1TT5	KC169688	None		L19I, N37NDGS, R41RK, K43R, R57K, Q61E, L63P, I72IM, I93L	B
	V0B0MD1QVA	V0B0MD1QVA	KC169693	None		I13V, N37D, K43R, R57K, L63A, I64V, H69Y, V77I	B
	V180MD1MSG	V180MD1MSG	KC169699	None		T12P, K14R, E35D, N37E, K43R, R57K, Q61D, L63P, I64L, A71T, I93L	B
	V1E0MDFJSL	V1E0MDFJSL	KC169704	None		L10I, M36I, R41K, K43R, I62V, L63Q, A71T, I72E, V77I, I93L	B
	D000MB6GUH	D000MB6GUH	KC168302	None		K43R, L63P, I93L	B
	D000MBIUXM	D000MBIUXM	KC168307	None		N37S, R41K, K43R, L63T, I64M, I72T, V77I	B
	D000MF7TXK	D000MF7TXK	KC168341	None		I3V, N37D, K43R, I62IV, L63P, I93L	B
	D180M97LSG	D180M97LSG	KC168373	None		R41K, K43R, I62V, L63A, A71T, V77I, I93L	B
	D200M94MIY	D200M94MIY	KC168391	None		T12N, L19I, E35D, N37D, R41K, K43R, R57K, L63P, C67S, A71V, V77I, I93L	B
	D200MB5NY4	D200MB5NY4	KC168397	None		T12P, K14N, I15V, R41K, K43R, D60E, L63P, A71V, I93L	B
	D270ME0PSE	D270ME0PSE	KC168407	None		T4TP, L19LI, K43R, L63P, A71V, V77I, I93L	B
	D280MA3SSH	D280MA3SSH	KC168410	None		T12N, L19I, E35D, N37D, K43R, R57K, L63P, C67S, A71V, V77I, I93L	B
	DM00M98DL5	DM00M98DL5	KC168470	None	Q58E	L19Q, R41K, K43R, I62V, L63P, V77I, I93L	B
	DV00MHFCRG	DV00MHFCRG	KC168480	None		I13V, L19I, K20M, E35D, K43R, R57K, Q61N, L63Q	B
	E000F92KTS	E000F92KTS	KC168492	None		I3IV, T12P, K14R, G16E, E35D, K43R, R57K, L63P, I72V, I93L	B
	E000FO3IKE	E000FO3IKE	KC168514	None		M36I, K43R, I62V, I64V, I72V	B
	E000M8AMVJ	E000M8AMVJ	KC168555	None		T12A, L19LV, N37S, R41K, K43R, I62V, L63H, V77VI, I93L	B
	B8T0F74DT9	B8T0F74DT9	KC168151	None		K43R, L63P, I72V, V77I	B
	BH00MA6JSH	BH00MA6JSH	KC168159	None	L33F	I13V, P39T, R41K, K43R, D60E, L63P, I64V, Q92K	B
	E1AWMGACKT	E1AWMGACKT	KC168671	None		E34EG, N37T, K43R, L63P, A71T, I72E, V77I, I93L	B
	E200F74NU7	E200F74NU7	KC168685	None		I3V, E35D, K43R, R57K, L63A, I64L, A71V, I72IT, V77VI, I93L	B
	E200MB0OTQ	E200MB0OTQ	KC168704	None		I3V, E35D, K43R, R57K, L63AP, A71V, V77VI, I93L	B
	E800MB4QW4	E800MB4QW4	KC168754	None		P39S, K43R, I62V, L63P, I64V	B
	C000F92ORV	C000F92ORV	KC168173	None		I13V, L19I, K20M, E35D, K43R, R57K, Q61N, L63Q	B
	G000MB3TSV	G000MB3TSV	KC168853	None		T12TK, I13IV, K14R, K43R, D60E, L63E, I64IV, I72T, V77VI	B
	G200MD2QSG	G200MD2QSG	KC168874	None		N37NT, R41K, K43R, R57RK, L63S, K70T, A71V, I72T, V77I, I93L	B
	C000MB0SS7	C000MB0SS7	KC168185	None		R41K, K43R, L63P	B
	C000MB7MO8	C000MB7MO8	KC168186	None		Q7R, R41K, K43R, Q61E, I62V, L63H, I64IM, K70KAET, I93L	B
	J000FS5PVN	J000FS5PVN	KC168917	None		T12K, I15V, L19I, R41K, K43R, L63T, E65D, H69Q, K70R, I72V, L90LW, I93F	B
	J000M98LTC	J000M98LTC	KC168942	None		T12TAS, K14KR, L19I, E35ED, R41K, K43R, L63P, I72IV, L89LF, I93L	B
	J000MC0MQU	J000MC0MQU	KC168960	None		T12K, K43R, R57K, L63P, V77I, I93L	B
	C000ML_POG	C000ML_POG	KC168194	None		L19V, R41K, K43R, L63H, I64IV	B
	J000MH7P7V	J000MH7P7V	KC168997	None		T12R, L19V, N37D, R41K, K43R, L63A, I93IL	B
	J180MA4TQN	J180MA4TQN	KC169025	None		R41K, K43R, I62V, L63T, A71T, V77I, I93L	B
	J280FE0OQD	J280FE0OQD	KC169051	None		I13V, E35D, N37D, K43R, L63P, A71V, I72V, I93L	B
	C100ME1SQO	C100ME1SQO	KC168202	None		R41K, K43R, Q61E, I62V, L63H, A71T	B
da Silveira (2012)	BRMS45	BRMS45	JF342296	None		I15V, E35D, M36I, R41K, K43R, L63C, V77VI	B
	BRMS01_10	BRMS01_10	JF342312	None		I13V, E35ED, K43R, I62V, L63H	B
De Gascun (2012)	IRL01149	IRL01149	JN622369	None		W6WC, R8RL, I15V, E35D, N37D, K43R, L63P, H69N, A71T	B
	IRL03454	IRL03454	JN622375	None		L10I, I15V, K43R, R57K, D60E, Q61E, L63P, I93L	B
	IRL11496	IRL11496	JN622392	None		I15V, E35D, N37D, K43R, L63P, C67S	B
	IRL14498	IRL14498	JN622405	None		I15V, E35D, N37D, K43R, L63P, H69N, A71T	B
	IRL10350	IRL10350	JN622437	None		I13V, E35D, N37E, K43R, D60E, Q61QE, L63P, I72IV	B
	IRL24895	IRL24895	JN622466	None		E35D, N37D, R41K, K43R, L63P, C67S	B
	IRL25551	IRL25551	JN622471	None		K43R, I62V, L63P, V77I, I93L, N98NI	B
	IRL28637	IRL28637	JN622477	None		E35D, N37D, K43R, P44PA, G51GR, D60DN, L63P, H69N	B
	IRL40106	IRL40106	JN622498	None		I15V, E35D, N37D, K43R, L63P, C67S	B
	06IRL07631	06IRL07631	JN622526	None		I15V, E35D, N37D, K43R, L63P, H69N, A71T	B
	IRL35057	IRL35057	JN622574	None		W6WL, I15V, E35D, N37D, K43R, I62IV, L63P, H69N, A71T	B
	IRL41191	IRL41191	JN622590	None		I15V, E35D, N37D, K43R, R57RG, D60E, L63P, C67S, I72IL	B
	IRL51603	IRL51603	JN622609	None		L10V, T12A, I15EV, E35D, K43R, L63P, C67S	B
	IRL12103	IRL12103	JN622628	None		N37E, K43R, I62V, L63P, H69N, V77I	B
	IRL16685	IRL16685	JN622637	None		I15V, E35D, M36I, N37D, K43R, I62V, L63S	B
	IRL31721	IRL31721	JN622657	None		T12P, E35D, M36MI, N37D, K43R, I62V, L63P, C67S	B
	IRL49431	IRL49431	JN622695	None		L10IS, I13V, N37D, K43R, R57RS, L63P, C67S, I93L	B
	IRL55119	IRL55119	JN622701	None		E35D, N37E, K43R, L63P, H69N, I93IL	B
	IRL00933	IRL00933	JN622709	None		Q7QK, E35D, M36I, R41K, K43R, F53FI, L63Q, I64V, K70R	B
	IRL02192	IRL02192	JN622711	None		L10LI, I13IV, E35ED, N37E, K43R, L63P, C67S	B
	IRL02466	IRL02466	JN622712	None		E35D, M36I, R41K, K43R, L63Q, I64V, K70KR	B
	IRL09528	IRL09528	JN622722	None		E35D, N37D, R41K, K43R, I62IV, L63APT, I64IM, C67S, A71V, V77VI, I93L	B
	IRL14380	IRL14380	JN622730	None		E35D, K43R, L63P, E65D	B
	IRL26927	IRL26927	JN622751	None		T12TS, L19T, K43R, R57K, I62M, L63PT, C67CY, A71I, V77I, Q92R, I93L	B
	IRL45569	IRL45569	JN622779	None		E35D, N37D, R41K, K43R, D60E, L63P, C67S	B
	IRL69921	IRL69921	JN622813	None		I15V, E35D, N37D, K43R, L63P	B
Delwart (2012)	478-7774-3	478-7774-3	JN214929	None		T12A, N37E, K43R, I62V, L63H, A71T, V77I	B
	479-3600-2	479-3600-2	JN214938	None		T12A, K43R, L63P, V77I, I93L	B
	476-7173-1	476-7173-1	JN214956	None		K14R, R41K, K43R, I64V	B
	477-2393-8	477-2393-8	JN214982	None		T4TS, K43R, R57K, L63P, H69Y	B
	477-4457-0	477-4457-0	JN214992	None		K14R, N37D, K43R, L63P, K70R	B
	477-1661-0	477-1661-0	JN215129	None		T12P, K14R, Q18E, K43R, L63T, A71V, V77I, I93L, L97I	B
	478-6592-0	478-6592-0	JN215168	None		L10I, E35D, N37D, K43R, I62V, L63T, E65D, I93L	B
Gaspareto (2012)	IMPB69	IMPB69PT	HM752188	None		I13V, I15V, N37S, R41K, K43R, R57K, L63P, I64L	B
	MB70	MB70PT	HM752189	None		I13V, I15V, L19I, N37S, R41K, K43R, R57K, L63P, I64L	B
Karlsson (2012)	SE_98	SE_98	JQ698733	None		N37NS, R41K, K43R, L63P, V77I, I93L	B
	SE_126	SE_126	JQ698755	None		I13V, M36I, K43R, R57K, I62V, L63P, I64M, A71V, I93L	B
	SE_261	SE_261	JQ698848	None		T12A, E35D, N37E, R41K, K43R, I62IV, L63P, I72IM, V77I, I93IL	B
	SE_295	SE_295	JQ698869	None		R41RK, K43R, I62V, L63P, V77VI, I93L	B
Machado (2012)	CUPL0903	CUPL0903	HQ655336	None		I13V, K20R, N37I, R41K, K43R, L63P, H69Q	B
Murillo (2012)	23116	23116	KC412809	None		N37ND, R41RK, K43R, K45KR, R57K, I62V, L63A, E65D, A71V, V77I, I93L	B
	31226	31226	KC412826	None		N37ND, R41RK, K43R, R57K, I62V, L63A, E65D, A71V, V77I, I93L	B
Ragonnet-Cronin (2012)	A05_062	A05_062	JX014666	None		I15V, E34EK, N37A, K43R, G51GE, R57K, L63P, V77I, I93L	B
	A10_128	A10_128	JX014728	None		I15V, E35D, N37T, R41K, K43R, L63P	B
	A10_265	A10_265	JX014786	None		I15V, R41N, K43R, D60E, L63P, V77VI	B
	A10_290	A10_290	JX014794	None		E35D, N37D, K43R, L63P, I93L	B
	A10_411	A10_411	JX014836	None		L10I, T12S, K14R, L19I, N37S, R41K, K43R, L63T, I64V, I93L	B
	B05_147	B05_147	JX014860	None		K43R, I62V, L63P, A71T, V77I, I93L	B
	B05_302	B05_302	JX014867	None		I15V, Q18QDEH, N37I, K43R, R57K, I62IV, L63P, V77VI, I93L	B
	B07_418	B07_418	JX014955	None		I15V, N37D, K43R, I62V, L63T, A71T, I72E, V77I, I93L	B
	B07_459	B07_459	JX014970	None		I13V, E35D, N37ND, K43R, L63P, I64V, T91A	B
	C05_030	C05_030	JX014983	None		T12S, R41K, K43R, R57RK, Q61E, L63P, I72V, V77I, I93L	B
	C06_010	C06_010	JX014994	None		P9S, I15V, N37T, K43R, R57K, L63P, V77L, I93L	B
	C07_081	C07_081	JX015014	None		L10V, T12IKN, I15V, L19V, E35D, K43R, R57K, L63P, I93L	B
	E07_025	E07_025	JX015045	None		E35ED, K43R, I62V, L63P, V77I, I93L	B
Ragonnet-Cronin (2012)	PHAC07_259	PHAC07_259	JQ674767	None		K43R, I62V, L63P, I72V, V77I, I93L	B
	PHAC07_276	PHAC07_276	JQ674773	None		I15V, N37D, K43R, I62V, L63T, A71T, I72E, V77I, I93L	B
	PHAC08_058	PHAC08_058	JQ674812	None		E35D, N37D, K43R, L63P, A71T, I93L	B
	PHAC08_081	PHAC08_081	JQ674817	None		I15V, N37D, K43R, I62V, L63T, A71T, I72E, V77I, I93L	B
	PHAC08_300	PHAC08_300	JQ674878	None		T4P, T12S, L19I, E35D, N37A, R41K, K43R, L63Q, A71T, I72V, V77I	B
	PHAC09_113	PHAC09_113	JQ674922	None		I15V, N37D, K43R, I62V, L63T, A71T, I72E, V77I, I93L	B
	PHAC09_138	PHAC09_138	JQ674927	None		K43R, L63S, I64L, G68K, H69K, A71V, I72T, I93L	B
	PHAC07_272	PHAC07_272	JQ674970	None		I15V, N37D, K43R, I62IV, L63T, A71T, I72E, V77I, I93L	B
	PHAC07_283	PHAC07_283	JQ674975	None		K43R, L63S, H69Q, V77I	B
	PHAC07_310	PHAC07_310	JQ674989	None		I15V, N37D, K43R, I62V, L63T, A71T, I72E, V77I, I93L	B
	PHAC07_332	PHAC07_332	JQ675001	None		T12P, K14R, E35D, N37S, R41K, K43R, L63P, C67S, A71V, V77I, I93L	B
	PHAC08_055	PHAC08_055	JQ675054	None		E35D, N37E, K43R, R57K, D60E, I62IV, L63P, I93L	B
	PHAC08_127	PHAC08_127	JQ675091	None		K43R, I62V, L63P, A71T, V77I, I93L	B
	PHAC08_274	PHAC08_274	JQ675172	None		I15V, N37D, K43R, I62V, L63T, A71T, I72E, V77I, I93L	B
Telan (2012)	11053021	11053021	AB747475	None		L19T, R41K, K43R, L63P, Q92E	B
Yang (2012)	GZ168	GZ168	JN848944	None		R41K, K43R, L63P, V82I, I93L	B
Alencar (2013)	PE2-0019	PE2-0019	JQ238004	None		K14R, R41K, K43R, I62V, L63P, K70KT, I72IT, I93L	B
	MG2-0020	MG2-0020	JQ238022	None		I15V, E35D, M36I, K43R, I62V, L63A, K70R	B
	SP2-0045	SP2-0045	JQ238091	None		I13V, K14R, N37E, K43R, I64V, V77I	B
	SP2-0052	SP2-0052	JQ238111	None		E35D, R41RK, K43R, R57K, I62V, L63Q, A71V, I72M, I93L	B
	PE2-0069	PE2-0069	JQ238136	None		L19IV, R41K, K43R, I62V, L63A, I72V, I93L	B
	PE2-0031	PE2-0031	JQ238223	None		T4H, E35D, M36I, R41K, K43R, R57RK, I62IV, L63P, V77I, I93L	B
Ferreira (2013)	BR08SP440	BR08SP440	HM533985	None		V11G, L19I, R41K, K43R, I62V, L63A, I64M, A71V, I93L	B
	BR09SP85	BR09SP85	HM534068	None		I13V, G16E, N37CS, P39S, K43R, Q61E, I62K, V77I, L89M	B
	BR09SP91	BR09SP91	HM534074	None		M36I, N37D, R41K, K43R, L63P, I93L	B
	BR09SP179	BR09SP179	HM534098	None		L10I, I13V, L19S, K43R, L63P, I93L	B
	BR09SP210	BR09SP210	HM534125	None		R41K, K43R, L63P, I72V, V77I, I93L	B
	BR09SP331	BR09SP331	HM534160	None		L33V, N37E, K43R, L63S, I64V, I93L	B
Frentz (2013)	EHR-02641	EHR-02641	JX299591	None		E35ED, K43R, I62V, L63P, V77VI, I93L	B
	EHR-06767	EHR-06767	JX299655	None		N37D, K43R, R57K, D60E, I62V, L63P, A71T, V77I, I93L	B
	EHR-10048	EHR-10048	JX299697	None		T12X, K14KR, N37E, K43R, L63P, A71T, V77I, I93L	B
	EHR-11548	EHR-11548	JX299724	None		R41K, K43R, R57K, L63P, I93L	B
	EHR-11789	EHR-11789	JX299730	None		N37E, K43R, I62V, L63P, H69N, V77I	B
	EHR-14042	EHR-14042	JX299770	None		T12P, L33V, N37T, R41K, K43R, I62V, L63HPSY, A71T, I93L	B
	EHR-16836	EHR-16836	JX299819	None		E35D, N37D, K43R, L63P, V77I, I93L	B
	EHR-16881	EHR-16881	JX299821	None		T12A, L19I, E35D, N37S, K43R, L63P	B
	EHR-191213	EHR-191213	JX299856	None		L10I, E35D, N37D, K43R, Q61E, L63P, A71T, I85V	B
	EHR-21997	EHR-21997	JX299909	None		T12S, M36V, N37S, R41K, K43R, R57K, L63P, I93IL	B
	EHR-24322	EHR-24322	JX299964	None		T12P, K14R, L19LI, N37S, R41K, K43R, L63P, I64L, V77I, I93L	B
	EHR-25107	EHR-25107	JX299974	None		L10I, N37D, R41K, K43R, I62IV, L63T, H69HY, A71T, I72T, V77I, I93L	B
	EHR-25236	EHR-25236	JX299979	None		E35D, N37D, K43R, D60E, L63P, I93L	B
	EHR-30974	EHR-30974	JX300072	None		Q18L, E35D, R41K, K43R, L63P, A71T, I93L	B
	EHR-38682	EHR-38682	JX300190	None		E35D, N37E, R41K, K43R, I62IV, L63P, V77VI, I93L	B
	EHR-41221	EHR-41221	JX300238	None		N37D, R41K, K43R, I62V, L63P, V77L, T80TA, I93L	B
	EHR-43578	EHR-43578	JX300274	None		T12TP, R41K, K43R, R57K, L63P, I64L, V75I, I93L	B
	EHR-483771	EHR-483771	JX300347	None		T12TA, I13IV, K14R, M36I, N37D, K43R, R57K, L63P, H69K, A71T, I93IL	B
	EHR-51897	EHR-51897	JX300403	None		T12S, K43R, Q61E, I62V, L63P, I93L	B
	EHR-53944	EHR-53944	JX300436	None		K43R, Q61E, L63PST, I64L, A71AV, I72IT, V77I, I93L	B
	EHR-56990	EHR-56990	JX300490	None		E35D, M36I, N37D, K43R, R57K, I62V, L63S, A71V, I93L	B
	EHR-60046	EHR-60046	JX300537	None		R41K, K43R, I62V, L63H, H69S, A71V, I93L	B
	EHR-63219	EHR-63219	JX300597	None		L10IS, I13V, N37D, K43R, R57RS, L63P, C67S, I93L	B
	EHR-64577	EHR-64577	JX300622	None		N37D, K43R, R57K, D60E, I62IV, L63P, V77I, I93L	B
	EHR-65025	EHR-65025	JX300635	None		K43R, Q61E, I62IV, L63P, I72V, V77I, P81PL, I93L	B
	EHR-74167	EHR-74167	JX300804	None		E34G, R41K, K43R, I62V, L63P, C67H, V77I, V82I, I93L	B
	EHR-75911	EHR-75911	JX300833	None		T12A, E35D, N37D, K43R, I62V, L63P, A71T, V77I, I93L	B
	EHR-77418	EHR-77418	JX300871	None		L10V, T12S, L19I, K43R, L63P	B
	EHR-77738	EHR-77738	JX300878	None		R41K, K43R, I93L	B
	EHR-78440	EHR-78440	JX300890	None		T12P, K14R, L19I, N37S, R41K, K43R, L63P, I64L, V77I, I93L	B
	EHR-81034	EHR-81034	JX300920	None		T12A, E35D, N37D, K43R, L63P, A71T, V77I, I93L	B
	EHR-85307	EHR-85307	JX300991	None		T12P, L19I, N37S, L38LM, R41K, K43R, I62V, L63S, V77I, I93L	B
	EHR-86462	EHR-86462	JX301005	None		N37NS, R41K, K43R, L63P, V77I, I93L	B
	EHR-86495	EHR-86495	JX301006	None		E35D, N37D, K43R, D60E, L63P, I93L	B
	EHR-92143	EHR-92143	JX301079	None		L33LV, N37S, R41K, K43R, I62V, L63Q, H69S, A71V, I72T, I93L	B
	EHR-93415	EHR-93415	JX301092	None		K14R, K43R, I62V, L63H	B
	EHR-93666	EHR-93666	JX301095	None		N37S, P39Q, R41K, K43R, R57K, L63P, V77VI	B
	EHR-96899	EHR-96899	JX301136	None		E35D, M36I, N37D, K43R, I62V, L63P, I64L, I72V, Q92K	B
	EHR-99471	EHR-99471	JX301159	None		I15V, E35D, N37E, K43R, A71V, I72T, I93L	B
Hawke (2013)	16102278	16102278	KC237969	None		L10I, T12K, I15V, G16E, M36I, R41K, K43R, L63T, H69K, I93L	B
	16102733	16102733	KC237970	None		L10I, T12K, K14KR, I15V, G16E, M36I, R41K, K43R, L63T, H69K, I93L	B
	20008913	20008913	KC238029	None		P39S, K43R, R57K, L63P, I64L, C67G, A71V, I93L	B
	20823461	20823461	KC238047	None		I15V, K43R, R57K, L63P, V77I, I93L	B
	2134805 H	2134805 H	KC238061	None		K43R, L63AS, A71T, V77I, I93L	B
	2477066 H	2477066 H	KC238081	None		L10I, T12TK, I15IV, M36I, R41K, K43R, L63T, H69K, I93L	B
	5256171 H	5256171 H	KC238173	None		L19Q, E35D, N37V, K43R, R57K, L63P	B
	5320834 H	5320834 H	KC238174	None		L10I, T12I, E35D, M36I, N37D, R41K, K43R, R57K, L63C, A71V, I93L	B

Protease Inhibitors

Database

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