Protease Inhibitors

HOME Genotype-Rx Genotype-Pheno Genotype-Clinical hivdb program

Protease Inhibitors

Subtype	B
Gene	PR
Mutation	M36V
Rx	>= 1 PI
IncludeMixtures	No

References	37
Patients	140
Isolates	172

Sequences matching input query are shown below. Original reference, patient identifier, isolate name, partial treatment histories and accession number are indicated. Complete treatment histories, when available, can be accessed by clicking the isolate name. Sequences may additionally be downloaded in the fasta format, or viewed as individual or composite alignments using the options above. If the user wishes to view individual alignments of isolates for which there are multiple clones, the user can choose to view either an alignment of consensus sequences derived from the clones or an alignment of each clone as well as a consensus sequence.

Author (yr)	Patient	Isolate	Acc#	PIs	Wks	PIMajorDRMs	PIMinorDRMs	OtherMut	Subtype
Condra (1996)	pt-U	ptUW52		IDV	52	I54V, V82F, L90M		L10I, K14R, E35D, M36V, N37D, L63P, I64V, A71T, I93L	B
Schapiro (1996)	EV25	EV25_W24	AF013842	SQV	24			M36V	B
Patick (1998)	503-223	503-223W20		NFV	20	N88S		L10I, T12X, I13V, E35D, M36V, N37D, P39X, I62V, L63P, A71V, V77I, V82I	B
	503-233	503-233W34		NFV	34	D30N	N88D	I15V, G16Q, E35D, M36V, N37D, G40T, R57K, L63P, H69Y	B
	503-353	503-353W31		NFV	31	D30N	N88D	E35D, M36V, N37T, L63P, V77I	B
Palmer (1999)	CA794	CA5076	AY798334	IDV, SQV, RTV	127	M46L, I54V, V82A, I84V, L90M	K43T	L10I, E35D, M36V, D60E, I62V, L63P, A71V	B
Zolopa (1999)		CA24578	AY798345	IDV, SQV, RTV, LPV, APV	234	M46L, I54V, V82A, I84V, L90M	L10F, L33F, K43T	K20R, E35D, M36V, N37D, D60E, I62V, L63P, A71V, I93L	B
Balotta (2000)	CB-285	CB-285	AF252009	IDV, SQV, NFV, RTV		I84V, L90M	G73S	L10I, I15V, E35D, M36V, N37E, D60E, I62V, L63P, A71V, I72M, V77I, I85V	B
Shulman (2000)	CA794	CA9584	AY798373	IDV, SQV, RTV	148	M46L, I54V, V82A, I84V, L90M	K43T	L10I, E35D, M36V, D60E, I62V, L63P, A71V	B
	CA1158	CA10673	AY798379	IDV, SQV, NFV, RTV	90	I54V, V82A, L90M	F53L	L10LI, E35D, M36V, R57K, D60E, I62V, L63P, A71V, I93L	B
		CA11021	AY798381	IDV, SQV, NFV, RTV	127	I54V, V82A, L90M	L23I, F53L	L10I, E35D, M36V, R57K, D60E, I62V, L63P, A71V, I93L	B
	CA1449	CA9793	AY798398	Unknown, NFV, IDV	>25	D30N	N88D	I15V, E35D, M36V, N37E, I62V, L63P	B
Delgado (2001)	ED_V54	ED_V54	AY016865	RTV		I54V, V82A, L90M		L10I, M36V, N37D, K55R, R57K, D60E, I62V, L63P, I64V, A71V	B
Fitzgibbon (2001)	JF-9	JF9-M6	AF442175	NFV		D30N		L10I, E35D, M36V, N37S, R41K, K45Q, I62V, A71T	B
Gonzales (2001)	CA1158	CA2634	AY030467	IDV, SQV, NFV	78	I54V, V82A, L90M	F53FL	L10I, E35D, M36V, R57K, D60E, I62V, L63P, A71V, I93L	B
	CA1175	CA2669	AY030480	NFV	30	D30N		E35D, M36V, N37X, R57RK, L63P, A71T	B
	CA1327	CA3334	AY030526	NFV	50	D30N		E35D, M36V, N37T, K45Q, L63P, H69K, K70R	B
	CA1389	CA3639	AY030543	NFV	30			L19I, E35D, M36V, N37E, I62V, L63P, T74TA, Q92K	B
	CA1431	CA3829	AY030570	SQV, NFV	91	M46L, L90M	L10F, I84L	E35D, M36V, N37E, I62V, L63P, I64L	B
	CA1615	CA4918	AY030705	NFV	71	D30N	L10LF, N88D	E35D, M36V, I62IV, L63P, A71AV, I72V, V77I, I93L	B
	CA1805	CA4847	AY030722	NFV	47	D30N		E35D, M36V, L63P, I64V	B
	CA2198	CA7973	AY030821	NFV	106	D30N		I13V, E35D, M36V, N37D, L63P	B
	CA2248	CA8152	AY030835	IDV, NFV	97	V32I, M46I, I47V, L90M		L10I, K20M, M36V, D60E, Q61E, L63P, I64V, C67S, V82VI, I93L	B
	CA2258	CA8183	AY030844	IDV	127	M46L, V82A	V11I, L24I	L10I, M36V, N37S, I62V, L63P, A71V, V77I, I93L	B
	CA3871	CA9643	AY030878	SQV, IDV	158	I54A, V82F		L10I, I13V, K14R, I15V, K20M, M36V, N37T, I62V, I64V, A71V, L89I	B
	CA4035	CA9748	AY031030	RTV, NFV, Unknown	>77	D30N	N88D	L10I, E35D, M36V, N37Y, R41K, I62V, L63T, A71V, I72V, I93L	B
	CA4097	CA9767	AY031089	NFV	85	D30N		L33V, E34D, M36V, K45Q, I64V, I72IM	B
	CA4111	CA9824	AY031101	IDV, NFV	165	D30N		I15V, E35D, M36V, P39Q, L63P	B
	CA4333	CA10734	AY031197	IDV, NFV	148	M46I, V82T	L24I, Q58E	L10I, K20I, M36V, L63P, I64V, A71V, I93L	B
	CA4822	CA11881	AY031481	NFV	108	D30N	M46V	I15V, E35D, M36V, N37T, K45Q, I64V	B
	CA5463	CA13536	AY032002	IDV, SQV, RTV	151	I54V, V82A, L90M		L10I, E35D, M36V, N37S, R57K, I62V, L63P, A71V, I93L, C95F	B
	CA5608	CA13916	AY032075	PI	NA	I84V, L90M	L10F	E35D, M36V, N37S, I62V, L63A, I64V, T74S, I93L	B
Kempf (2001)	DK-5973	DK-5973		IDV	83	I54V, V82A	L10F	E35D, M36V, R41K, D60E, Q61E, I62V, L63P, I64V	B
		8315_d431		IDV, LPV	144	M46I, I54V, V82A	L10F, L24I	E35D, M36V, R41K, D60E, Q61E, I62V, L63P, I64V	B
		8315_d867		IDV, LPV	206	M46I, I54V, V82A	L10F, L24I, F53FL	E35D, M36V, N37S, R41K, R57RK, D60E, Q61E, I62V, L63P, I64IV	B
		8315_d985		IDV, LPV	223	M46I, I54V, V82A	L10F, L24I, F53FL	E35D, M36V, N37S, R41K, R57RK, D60E, Q61E, I62V, L63P, I64IV, I72IV	B
	DK-7974	DK-7974		RTV, SQV, NFV, IDV	129	I54V, I84V, L90M	G73T	L10I, L19T, K20R, E35D, M36V, N37S, L63P, C67CF, A71V, V77I, I93L	B
Servais (2001)	JS2	JS97435	AJ401906	SQV, RTV	96	G48V, I54V, V82A, I84V		L10I, E35D, M36V, N37D, D60E, Q61E, I62V, L63P, A71V, V77I, I93L	B
		JS97470	AJ401913	SQV, RTV	108	G48V, I54V, V82A, I84V		L10I, L19I, E35D, M36V, N37D, D60E, Q61E, I62V, L63P, A71V, V77I, I93L	B
Clevenbergh (2002)	CP0720	CP0720	AF519421	NFV	52	M46I, I54V, V82A, L90M		W6L, L10LV, K20M, M36V, K55R, R57K, I62V, L63P, H69K, A71I, I93M, C95F	B
	CP1902	CP1902	AF519423	APV	104	I54V, V82A, I84V		L10I, K20R, E35D, M36V, N37D, D60E, Q61E, I62V, L63P, A71V, V77I, I93L	B
Kantor (2002)	CA1511	CA20572	AY047435	SQV, APV, NFV, Unknown, RTV, IDV	>152	M46I, I54IV, V82T, I84IV, L90M	L10LF, K43KT	K20M, M36V, L63P, A71V, I93IL, C95CF	B
Margot (2002)	MM-220236677	2202366771		PI	NA	D30N, L90M	N88D	I13IV, E35D, M36V, I62V, L63P, A71V, I72V, V77I	B
	MM-253636572	2536365721		PI	NA	M46L, I54V, V82A	L10F, L24I, Q58E	I15V, K20M, E35D, M36V, R57K, I62V, L63P, I64V, T74K	B
Romano (2002)	MZ-pt22	pt22-t0	AF493357	SQV, RTV, NFV, IDV		I54V, V82A, L90M	F53L	L10I, K20R, E35D, M36V, N37E, I62V, L63P, A71V, T74S, V77VI	B
		pt22-t1	AF493396	SQV, RTV, NFV, IDV, LPV		I54V, V82A, L90M	F53L, Q58QE	L10I, L19LI, M36V, N37E, K55KR, R57RK, I62V, L63P, A71V, T74TS, V77I	B
Tural (2002)	880307	880307		NFV	54	D30N	N88D	L10V, I15V, K20T, E35D, M36V, N37S, R41K, L63P, I85V	B
	880724	880724		SQV, RTV	56	I84V	V11I, L24I	L10I, T12P, K14R, E35D, M36V, N37S, R41K, Q61E, L63P, A71T, I72V, I93L	B
Monno (2003)	ML_Pat23	ML_Pat23		PI	NA			L19LI, E35D, M36V, L63P, H69K	B
	ML_Pat46	ML_Pat46		PI	NA	D30N	N88D	E35D, M36V, N37E, I62IV, L63P, H69N, A71V, I72V, V77I	B
	ML_Pat48	ML_Pat48		PI	NA	D30N	N88D	E35D, M36V, N37T, R41RK, I62V, L63LP, A71V, I72T, T74TA, I93L	B
Saah (2003)	AS-31	AS-31		NFV	44	D30N	N88D	E35D, M36V, N37D, L63P, I93L	B
	AS-37	AS-37		NFV	1	L90M		T12P, L19I, K20I, M36V, N37D, L63P, A71V, I93L	B
Shafer (2003)	A384_0136	0136c	EF549245	NFV	24	N88S		E35D, M36V, P39Q, R41K, L63P, A71V, I93L	B
Wu (2003)	CA1615	CA12094	AF544505	NFV	124	D30N	L10F, N88D	E35D, M36V, I62V, L63P, I72V, V77I, I93L	B
	CA3871	CA11039	AF544533	SQV, IDV	177	I54A, V82F		L10I, I13V, K14R, I15V, K20M, M36V, N37T, I62V, I64V, A71V, L89I	B
	CA4750	CA16174	AF544567	IDV, SQV	196	M46L, I54V, V82A	L24I	L10I, M36V, R41K, L63P, A71V	B
	CA7088	CA17556	AF544603	SQV, IDV, NFV	188	D30N		I15V, K20R, E35D, M36V, N37S, D60E, I62V, L63C	B
Colonno (2004)	RC-009-012-015	012-01521		NFV, SQV, ATV	30	D30N, I84V	L10F, N88D	K20R, E35D, M36V, N37D, L63P, H69Y, K70E, A71V, V77I	B
Gomez-Carrillo (2004)	96187	96187	AY365518	PI	NA	M46ML		L19I, T31TP, E35D, M36V, N37T, I62V, I93L	B
	97832	97832	AY365559	PI	NA	G48S, I54V, V82F, L90M		L10I, L19I, M36V, P39T, R57K, I62V, L63P, A71T, I93L	B
	98722	98722	AY365579	PI	NA	D30N	N88D	I15V, K20T, E35D, M36V, I62V, L63A, A71V, I72A, V77I, I93L	B
	99376	99376	AY365598	PI	NA	V32I, I54V, L90M	L33F, N83D	L10I, I13V, K14R, M36V, N37S, R41K, L63Q, I64V, A71V	B
	99634	99634	AY365601	PI	NA	D30N	N88D	L10V, K14R, E35D, M36V, L63P, A71V	B
	107699	107699	AY365773	PI	NA	M46I, I54V, V82A	L24I, F53L	L10V, I15V, E35D, M36V, N37S, R41K, L63P, A71T	B
	108153	108153	AY365781	PI	NA	I54V, V82F, L90M		E35D, M36V, N37D, I62V, L63P, A71V, V77I, I93L	B
Machado (2004)	cs120	cs120	AY313335	RTV	160	M46I		R8Q, L10I, K20R, E35D, M36V, N37D, L63P, H69Q, V77I, V82I, C95S	B
Montes (2004)	MB_patTUR	02_VIG701	AJ578171	SQV, RTV	197	M46L, I54V, V82A, I84V	L24I	L10I, I15V, M36V, P39Q, I62V, L63P, A71V	B
	MB_patDAV C	01_DAVC719	AJ577875	IDV, NFV	115			T12S, L33V, M36V, N37C, Q61H, I64V	B
Rhee (2005)	CA1158	CA33933	AY796531	IDV, SQV, NFV, RTV, APV, LPV	214	I54V, V82A, L90M	L23I, L33F, F53L	L10I, E35D, M36V, R57K, D60E, I62V, L63P, A71V, I93L	B
	CA1431	CA24759	AY796676	SQV, NFV	156	M46L, L90M	L10F, I84L	E35D, M36V, N37E, I62V, L63P, I64L	B
	CA1449	CA16101	AY796689	Unknown, NFV, IDV, SQV	>74	D30N, L90LM	N88D	I15V, E35D, M36V, N37E, I62V, L63P	B
		CA20648	AY796691	Unknown, NFV, IDV, SQV	>120	D30N, I54V, L90M	N88D	I15V, E35D, M36V, N37E, R41RS, W42WC, I62V, L63P, A71X	B
	CA1451	CA11803	AY796699	Unknown, IDV, NFV	>79	D30N	L10F, N88D	I15V, K20KT, E35D, M36V, R57K, L63P, I93L	B
		CA13931	AY796700	Unknown, IDV, NFV	>102	D30N	L10F, N88D	I15V, K20KT, E35D, M36V, R57K, L63P, I85IV, Q92QR, I93L	B
	CA1511	CA10770	AY796748	SQV, APV, NFV, Unknown	>75	L90M		K20M, M36V, L63P, A71V	B
	CA1625	CA13280	AY796812	IDV, NFV	166	N88S	L10LF	L5LF, E34D, M36V, L63P, I93IL	B
		CA16541	AF544507	IDV, NFV	194	N88S		E34D, M36V, I62V, L63P, I93L	B
	CA2198	CA21299	AY796888	NFV	116	D30DN		I13V, E35D, M36V, N37D, L63P	B
	CA4035	CA16100	AY797001	RTV, NFV, Unknown	>77	L90M		L10I, E35D, M36V, N37Y, R41K, I62V, L63P, V77I, I93L	B
	CA4097	CA33349	AY797016	NFV	233	D30N		I13V, L33V, E35D, M36V, K45Q, I64V	B
	CA4111	CA39061	AY797018	IDV, NFV, Unknown	>165	D30N	N88D	I15V, K20T, E35D, M36V, P39Q, L63P	B
	CA5391	CA33286	AY797315	IDV, NFV, LPV	271	M46I, V82F, L90M		I13IV, I15V, K20M, E35D, M36V, R41K, I62V, L63P, T74S, I93L	B
	CA5532	CA34022	AY797342	Unknown, NFV	>246	D30N	N88D	L10I, I13V, I15V, M36V, N37S, P39PS, K45R, R57K, L63P, I64V, A71V, I93L	B
	CA5996	CA24827	AY797377	IDV, RTV, NFV, SQV	173	G48GV, I84V, L90M	G73GS	L10I, I13V, E34D, E35ED, M36V, N37S, L63P, A71V, T74TS, I93IL	B
	CA7916	CA20371	AY797586	IDV, NFV	236	D30N	N88D	L10V, E35D, M36V, L63P, A71V, I93L	B
		CA33877	AY797587	IDV, NFV	239	D30N	N88D	L10V, E35D, M36V, L63P, A71V, I93L	B
	CA8028	CA20541	AY797657	NFV	245	D30N	N88D	I13V, E34D, M36V, L63P, A71V	B
		CA33829	AY797658	NFV	326	D30N	N88D	I13V, E34D, M36V, L63P, A71V	B
	CA8050	CA20576	AY797674	IDV, NFV	195	M46I, L90M		K20I, M36V, I62V, L63LP, I64V, I93L	B
		CA33850	AY797675	IDV, NFV, SQV, RTV	277	M46I, I84V, L90M		L10I, K20I, M36V, I62V, L63P, I64V, I93L	B
	CA8356	CA21282	AY797718	NFV	183	D30N	N88D	I15V, K20T, E35D, M36V, L63P, I85V, Q92QR	B
		CA24249	AY797719	NFV	210	D30N	N88D	I15V, K20T, E35D, M36V, L63P, I85V	B
	CA8440	CA33942	AY797761	IDV, NFV	226	D30N	N88D	I15V, E35D, M36V, R41K, D60E, L63P	B
	SWC-7353	7353-2381		NFV	95	D30N		E35D, M36V, N37H, R41K, L63P, I64V, K70R, V77I	B
	CA16193	CA38526	AY798190	SQV, NFV	274			M36V, N37S, I64V	B
	CA16262	CA38674	AY798207	NFV	302	D30N		I13V, K14KR, E35D, M36V, N37S, K45Q, L63P, I64V, V77I	B
	CA16265	CA38680	AY798209	NFV	230	D30N	N88D	E35D, M36V, N37T, L63P, A71V, I72V, V77I, I93L	B
	CA21074	CA48461	AY798313	NFV	95	D30N		T12P, K14R, E35D, M36V, D60E, L63P, H69Q, A71V, V77I	B
Baxter (2006)	12-2254	2254-30710	DQ876009	PI	NA	V32I, M46I, I47V, I54L, L90M	L10F, G73T	K20I, M36V, I62V, L63P, I66L, A71V, I72T	B
	12-3080	3080-30424	DQ876091	PI	NA			T12N, K14R, E35D, M36V, I62V, L63P, C67S	B
	12-3037	3037-30311	DQ876105	PI	NA	M46L, I54V, V82A, I84V, L90M	L10F, K43T, I50IM	E35D, M36V, N37ND, I62V, L63P, A71V, I72IV, T74S, I93L	B
	12-4089	4089-30409	DQ876181	PI	NA	I54V, I84V, L90M		L10I, L19I, E35D, M36V, L63P, A71V, I72V, T74S, I93L	B
	12-1059	1059-30423	DQ876368	PI	NA	L90M		K20M, M36V, R57RK, I62V, L63PS, I64IV, V82VI, I93L	B
	12-1973	1973-30619	DQ876407	PI	NA	V32I, I54V, V82T, I84V	V11VI, L33F, K43T, M46V, F53L	L10I, I13IV, I15V, K20R, E35D, M36V, N37NS, R41RK, L63P, I66F, A71V, T80TS	B
	12-2110	2110-30709	DQ876637	PI	NA	M46L, I54V, I84V	V11VI, L24I, L33F	L10V, I13V, K14R, I15V, L19LP, K20T, E35D, M36V, R41K, L63P, I64V, A71V, V77I, I93L	B
	12-2017	2017-30701	DQ876696	PI	NA	M46L, I54V, V82F	G48E, F53L	L10I, E35D, M36V, N37H, R41N, L63C, I64V, V77I, I93L	B
	12-1194	1194-30303	DQ876954	PI	NA	M46L, I54V, V82A	L24I, K43T	L10V, T12TK, I15V, L19LP, K20M, E35ED, M36V, R41RK, K55KR, Q61QH, I62V, L63P, I64V, I72IV, T74S, I85V, T91S	B
	12-2123	2123-30725	DQ876979	PI	NA	I54V, V82A, L90LM	F53L	L10V, K20R, E35D, M36V, N37E, R41RK, D60E, L63P, A71V, V77I, I93L	B
	12-1787	1787-30507	DQ877096	PI	NA	G48V, I54M, V82S, L90M	L33F	L10I, I13V, K20T, E34EQ, E35D, M36V, N37DE, I62V, L63P, I64M, H69Q, A71I, I72V, V77I, I93L	B
	12-2378	2378-30811	DQ877126	PI	NA	M46I, I50V, I54V, V82A	L33F, G73C	L10I, I13V, K20R, E35D, M36V, N37D, I62V, L63P, I93L	B
	48-1821	1821-30924	DQ877430	PI	NA	L90M	G73S	L10I, I13V, K14R, I15V, K20M, E35D, M36V, N37NS, I62V, L63P, A71V, I93L	B
	48-1825	1825-30924	DQ877431	PI	NA	L90M		K20M, E35D, M36V, R57K, I62IV, L63A, A71V, I93L	B
	48-1255	1255-30623	DQ877781	PI	NA	M46ML, I54V, I84V, L90M	L33F	E35D, M36V, N37ND, R57K, I62V, L63P, A71V, I93L	B
	48-1436	1436-30319	DQ877825	PI	NA	M46I, I84V, L90M		L10Y, K20I, M36V, L63P, I64V, I93L	B
	48-2012	2012-30930	DQ877844	PI	NA	M46I, I54V, V82T, I84V	K43T	L10I, K20R, E35D, M36V, N37T, R57K, L63P, I64V, H69Y, A71V, V77I, I85V, I93L	B
	48-2245	2245-30722	DQ877884	PI	NA	M46I, I50V, I54V, V82A, L90M	L33F	L10I, I13V, K20V, E35D, M36V, N37C, L63P, I64V, A71V, V77I, I93L, C95CF	B
	48-3100	3100-30320	DQ878007	PI	NA	V32I, I47V, G48V, I54M, V82A, I84V	K43T	L10I, K14R, E34Q, E35D, M36V, N37D, L63P, H69R, A71V	B
	48-3116	3116-30321	DQ878024	PI	NA	M46I, I50V, I54V, V82A, L90M	L23I	L10I, E35ED, M36V, N37D, R41K, L63P, A71V, I93L	B
	48-3128	3128-30415	DQ878036	PI	NA	M46MI, I54V, V82F, L90M	F53FL	L10V, K20R, E35D, M36V, N37E, R57K, I62V, L63P, A71I, V77I, I93L	B
		3128-31125	DQ878038	PI, RTV, TPV	>32	M46MIL, I47IV, I54V, V82L, L90M	L23I, F53L	L10V, I13V, K20R, E35D, M36V, N37E, R57K, D60DE, I62V, L63P, A71IV, V77I, I93L	B
		3128-40708	DQ878037	PI, RTV, TPV	>64	M46IL, I47IV, I54V, V82L, L90M	L23I, F53FL, Q58QE	L10V, I13V, K20R, E35D, M36V, N37E, R57K, D60DE, I62V, L63P, A71IV, V77I, L89LM, I93L	B
	48-3191	3191-30520	DQ878101	PI	NA	V32I, M46I, I47V		L10H, T12P, K14R, E35D, M36V, N37D, I62V, L63P, G68E, A71V, V77I, I93L	B
	48-3211	3211-30731	DQ878121	PI	NA	M46L, G48V, I54V, V82S	L24I	L10I, E34Q, M36V, I62V, L63P, A71V, I72V, I93L	B
	48-3332	3332-30929	DQ878226	PI	NA	M46L, I54V, V82A, I84V	L24I, K43T	L10I, T12P, K20R, E35D, M36V, N37D, D60E, L63P, A71V, V77VI, I93L	B
	48-4007	4007-30327	DQ878241	PI	NA	V32I, M46I, I47V, I50V, I54V, V82A, L90M	F53L	L10V, I15V, K20R, E34Q, E35D, M36V, N37E, I62V, L63P, A71L, V77L, I93L	B
	48-4063	4063-30402	DQ878294	PI	NA	V32I, M46I, I47V, I84V, L90M	L10F, L33F, G73S	T12Q, I13V, K20R, E35D, M36V, N37D, K43Q, I62V, L63P, K70E, A71T, I72T, V77I	B
	48-4095	4095-30417	DQ878325	PI	NA	I54V, I84V, L90M		L10I, T12P, K14R, K20R, E35D, M36V, N37S, R41K, L63P, I66V, A71T, I93L, C95F	B
	48-4246	4246-31119	DQ878479	PI, RTV, TPV	>19	I54V, V82S	L10F	E35D, M36V, N37E, R41K, R57K, L63P, A71V, I93L	B
		4246-40630	DQ878478	PI, RTV, TPV	>51	I54V, V82ST, I84IV	L10F	E35D, M36V, N37E, R41K, R57K, L63P, A71V, I93L	B
	48-4302	4302-30806	DQ878520	PI	NA	G48M, I54V, L76V, V82A, I84V	L33F, F53L	L10I, I13V, G16E, K20M, M36V, I62V, L63T, H69R, A71V, T74A, I93L	B
	48-5013	5013-30513	DQ878548	PI	NA	M46I, I54V, V82A, L90M	Q58E, G73S	L10I, I15V, G16A, L19P, K20M, L24F, M36V, K55KR, R57K, D60E, I62V, L63P, A71V, I72L	B
	48-5080	5080-30903	DQ878590	PI	NA	G48V, I54V, V82S	L24I, Q58E	L10I, K20M, E35N, M36V, N37D, D60E, Q61QE, I62V, L63P, I64V, I85V	B
	48-6163	6163-30729	DQ878739	PI	NA	M46I, I47V, I54V, V82A, L90M	K43T, F53L	L10V, I15IV, L19I, K20R, E35D, M36V, N37E, R57K, I62V, L63P, A71V, V77I, I93L	B
	48-6249	6249-30929	DQ878808	PI	NA	V32I, M46I, I47V, I54M, V82A	L10FV, L33LF, K43T	I15V, G16E, K20M, E34EQ, M36V, I62IMV, L63T, I72T, T74A, L89M	B
	48-7003	7003-30707	DQ878891	PI	NA	V32VI, M46MI, I47IV, I54IL, L90M	L33LF	L10LI, T12P, K14R, K20T, E35D, M36V, N37S, R41K, I62V, L63P, I72V, T74S, V77VI, I93L	B
	48-7015	7015-30715	DQ878897	PI	NA	M46L, I54V, V82F		L10V, K14R, I15V, E35D, M36V, N37T, R57K, D60E, Q61E, I62V, L63P, I93L	B
	48-7023	7023-30915	DQ878908	PI	NA	I54V, V82F, L90M	F53L, Q58E	L10I, K20R, E35D, M36V, N37E, I62V, L63P, I64V, A71V, T74S, V77I, I85V, I93L	B
		7023-40109	DQ878907	PI, RTV, TPV	>17	I54V, V82F, L90M	F53L, Q58E	L10I, K20R, E35D, M36V, N37E, I62V, L63P, I64V, A71V, T74S, V77I, I85V, I93L	B
	48-7051	7051-30505	DQ878922	PI	NA	D30N	N88D	E35D, M36V, N37D, I62V, L63P, I64L, I72V, I93L	B
	48-9507	9507-30930	DQ877365	PI	NA	I54IV, L90M	L10F, G73S	K20I, E35D, M36V, R57RK, I62V, L63P, A71T, I72IMR	B
	48-9191	9191-30915	DQ877539	PI	NA	M46I, I54V, L76V, I84V	L10F, L24I	E34Q, M36V, R41K, K55R, I62V, L63P, I64V	B
	48-9180	9180-30916	DQ877564	PI	NA	L90M		K14KR, K20I, E35D, M36V, N37E, I62V, L63P, A71V, T74S, V77I, I93L	B
	48-9259	9259-30918	DQ877610	PI	NA	M46L, I54V, V82A, I84V	L24I, L33F, K43T, G73S	L10I, I13IV, K20R, E35D, M36V, N37D, K55R, L63P, A71V, T91S	B
	48-9234	9234-30916	DQ877642	PI	NA	D30N	L33F, F53FL, N88D	I15V, K20KR, E35D, M36V, N37D, R57K, D60E, I62V, L63P, A71T	B
	48-9098	9098-30930	DQ877664	PI	NA	I54V, V82A, L90M	L10F, F53FL	K20R, E35D, M36V, N37E, K55KR, R57K, D60E, I62V, L63P, A71V, V77I, I93L	B
Eyer-Silva (2007)	BRSQ14	05BRSQ14	DQ899722	NFV	209	D30N	L33F, N88D	I15V, G17D, E35D, M36V, D60E, I62V, L63P, A71T, I72T	B
von Wyl (2007)	97	5247096	EF449924	PI	NA	M46L, N88S, L90M		K14R, E35D, M36V, R41K, I62V, L63P, G68E, A71V, I93L, L97F, N98K	B
Riddler (2008)	RG73185	RG73185w71		LPV	67			M36V, N37C, R41K, I62V, L63P, I93L	B
Cardoso (2009)	3060	BRGO3060	FJ638431	PI	NA	M46I, I54V, V82A	L24I, G73C	L10I, I15V, G16A, K20R, M36V, N37E, K55R, R57K, I62V, L63P, H69Y, A71T, I72T	B
De Meyer (2009)	LPV32	LPV32BL		PI	NA			M36V, L63P, I93L	B
		LPV32-48w		PI, LPV	>48			M36V, L63P, I93L	B
Rhee (2009)	CA5753	CA50760	FJ983190	NFV	367	L90M	G73S	L10I, K20I, M36V, I62V, L63P, A71I	B
	CA7883	CA20320	FJ983237	NFV	155	D30N	N88D	T12TS, I13V, K14KR, I15V, E35D, M36V, N37D, R57K, L63P, A71IT, I93IL	B
Dau (2010)	06460B	06460B	GU581748	PI	NA	M46MI, I54V, V82A, I84V	L24LI	L10I, E35D, M36V, N37ND, R57K, D60E, Q61E, I62V, L63P, A71V	B
	07733A	07733A	GU581865	PI	NA	L90M		L10V, E35D, M36V, N37H, P39S, R41K, I62V, L63P, A71V, T74S, V77I, I93L	B
	08636A	08636A	GU581930	PI	NA	M46I, V82T, I84V	L24I	L10I, T12S, I13V, K20M, M36V, L63P, A71V, I72V	B
	08757A	08757A	GU581943	PI	NA	M46L, I54V, I84V, L90M	K43T, T74P	L10I, G16GA, K20R, E35D, M36V, N37E, I62V, L63P, A71V, Q92QK, I93L	B
	10334A	10334A	GU581999	PI	NA	D30N	N88D	L10I, K20R, E35D, M36V, Q61E, I62V, L63P, T74S, V77I, I93L	B
	11486A	11486A	GU582045	PI	NA	M46I, I54M, L76V, V82F	L33F, K43T	L10I, I13V, E35D, M36V, D60E, L63P, E65D, H69HY, A71V, I72V, L89LM, I93L	B
	12047A	12047A	GU582058	PI	NA	M46MIL, G48GV, I54V, V82A	L10FV, L24LI, K43KT, Q58QE	I15V, L19LI, K20KM, E35D, M36V, R41K, D60E, I62V, L63PT, A71V, I72V, V75I, I93L	B
Hamkar (2010)	5	Ir-HIV-DR-05	GU724808	PI	NA	L90M		L10V, I13V, I15V, G16E, K20I, M36V, I62V, L63N, I64M, A71V, V77I, I93L	B
	26	Ir-HIV-DR-26	GU724829	PI	NA	L90M		L10V, I13V, I15V, G16E, K20I, M36V, I62V, L63N, I64M, A71V, V77I, I93L	B
	29	Ir-HIV-DR-29	GU724832	PI	NA	L90M		L10V, I13V, I15V, G16E, K20I, M36V, I62V, L63N, I64M, A71V, V77I, I93L	B
Rhee (2010)	CA7916	CA55061	GQ210297	IDV, NFV	239	D30N	N88D	L10V, E35D, M36V, L63P, A71V, I93L	B
Jones (2012)	130018	130018	JN669479	PI	NA	D30DN	N88D	K20R, E35D, M36V, N37D, R41K, D60E, I62V, L63P, A71T, V77I	B
	135586	135586	JN669546	PI	NA	I54M, L90M	L33F	L10I, T12N, L19I, K20T, E34Q, E35D, M36V, N37T, I62V, L63P, I64V, T74S, V77I, I93L	B
	141703	141703	JN669604	PI	NA	M46I, I54V, V82A	L24I, F53FL	L10V, I15V, E35D, M36V, N37NS, R41K, I62V, L63P, A71T	B
	177780	177780	JN670458	PI	NA	M46I, I54V, I84V	L24I	L10I, T12P, A22V, E35D, M36V, R41K, K55R, L63P, H69R, A71V, I93L	B
	195155	195155	JN670966	PI	NA	D30N		E35D, M36V, K45R, I62V, L63A, A71T, V77I, L89I	B
	203270	203270	JN671305	PI	NA	M46I, I54V, I84V		I3V, R8Q, I13V, K20T, E35D, M36V, R41K, I62V, L63P, A71T, I72R, P79S	B
	207115	207115	JN671422	PI	NA	V32I, L90M	L33F, M46MV, F53L, N83D, L89V	L10I, I13V, M36V, N37S, R41K, I62IV, L63Q, A71V	B

Protease Inhibitors

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