Protease Inhibitors

HOME Genotype-Rx Genotype-Pheno Genotype-Clinical hivdb program

Protease Inhibitors

Subtype	A
Gene	PR
Mutation	L63S
Rx	PI-naive
IncludeMixtures	No

References	61
Patients	176
Isolates	178

Sequences matching input query are shown below. Original reference, patient identifier, isolate name, partial treatment histories and accession number are indicated. Complete treatment histories, when available, can be accessed by clicking the isolate name. Sequences may additionally be downloaded in the fasta format, or viewed as individual or composite alignments using the options above. If the user wishes to view individual alignments of isolates for which there are multiple clones, the user can choose to view either an alignment of consensus sequences derived from the clones or an alignment of each clone as well as a consensus sequence.

Author (yr)	Patient	Isolate	Acc#	PIs	PIMinorDRMs	OtherMut	Subtype
Carr (1999)	SE8891	SE8891	AF069673	None		I13V, I15V, E35D, M36I, R41K, K43R, R57K, L63S, H69K, L89M	A
	SE8538	SE8538	AF069669	None		I13V, I15V, E35D, M36I, R41K, K43R, R57K, L63S, H69K, L89M	A
Ellenberger (1999)	El-IC3642	IC3642	AF000489	None	I47M	I13V, K14R, K20I, A22P, E35K, M36I, R41K, L63S, I64L, H69K, L89M	A
Nkengasong (2000)	JN_IC105	JN_IC105	AF216980	None		I13V, K14R, K20I, E35D, M36I, R41K, L63S, H69K, I72V, L89M	A
Eshleman (2001)	SE653	SE653	AF388109	None		T12I, I13V, K14KR, I15V, G17E, K20I, E35D, M36I, R41K, R57K, L63S, I64L, H69K, L89M	A
	SE649	SE649	AF388107	None		I13IV, L19LI, E35D, M36I, R41K, K45R, R57K, L63S, H69K, L89M	A
Dowling (2002)	KNH1135	KNH1135	AF457065	None		L10I, I13V, G16E, K20R, E35D, M36I, P39S, R41K, K45R, R57K, D60E, L63S, H69K, L89M	A
	KER2008	KER2008	AF457052	None		L10V, I13V, I15V, Q18E, L19M, K20R, E35D, M36I, R41K, R57K, I62V, L63S, H69K, L89M	A
Eshleman (2002)	125636u	125636u	AF410213	None		I13V, E35D, M36I, R41K, R57RK, L63S, H69K, V77I, L89M	A
	132318b	132318b	AF410221	None		I13V, K20R, E35D, M36I, R41K, K45R, R57K, L63S, H69K, L89M	A
	137499q	137499q	AF410228	None		L10LI, I13IV, K14R, I15IV, E35D, M36I, R41K, K45R, R57K, L63S, H69K, L89M	A
Fonjungo (2002)	CM215	CM215	AF406719	None		I13V, K20R, E35D, M36I, N37D, R41K, L63S, H69K, L89M, I93L	A
Arroyo (2004)	01TZA195	01TZA195	AY253306	None		I13V, K14R, Q18L, E35D, M36I, R41K, K45R, R57K, L63S, H69K, L89M	A
	01TZA359	01TZA359	AY253319	None		T12S, L19V, K20R, E35D, M36I, R41K, R57K, L63S, H69K, L89M	A
Eshleman (2004)	ESH_Pat69	ESH560	AY435303	None		I13V, E35D, M36I, R41K, L63S, H69K, L89M	A
Fang (2004)	ML752_3_1997	752_3_1997	AY322193	None		I13V, E35D, M36I, R41K, R57K, L63S, H69K, L89M	A
Konings (2004)	KF_Pat100	01CM5184	AY359782	None		I13V, E35N, M36I, N37D, R41K, R57K, L63S, H69K, L89M	A
Servais (2004)	SJ_Pat10	SJKLM017	AJ412944	None		L10I, T12TP, K14R, E35D, M36I, R41K, R57K, L63S, H69K, L89M	A
	SJ_Pat17	SJKLM036	AJ412959	None		I13V, E35D, M36I, R41K, K45R, R57K, L63S, H69K, L89M	A
Snoeck (2004)	BE48	BE48	AY900749	None		I13V, E35D, M36I, R41K, K45R, R57K, L63S, H69K, L89M	A
Carr (2005)	01NGPL490	01NGPL490	DQ013273	None		L10I, I13V, K14R, K20I, E35Q, M36I, R41K, R57K, L63S, C67E, H69K, V82I, L89M	A
Ciccozzi (2005)	MC_AY611658	A55	AY611658	None		I13V, E35D, M36I, R41K, K45R, R57K, L63S, H69K, L89M	A
	MC_AY611696	A61	AY611696	None		L10V, I13V, E35D, M36I, R41K, K45R, R57K, L63S, C67Y, H69K, L89M	A
	MC_AY611712	A32	AY611712	None		I13V, E35D, M36I, R41K, K45R, R57K, L63S, H69K, L89M	A
	MC_AY611714	A40	AY611714	None		L10V, I13V, E35D, M36I, R41K, K45R, R57K, L63S, C67Y, H69K, L89M	A
K'Aluoch (2005)	OK_TC021704	TC021704	DQ079834	None		T12TA, I13V, K14KR, G16GE, E35D, M36I, R41K, R57K, L63S, H69K, L89M	A
Non-B Workgroup (2005)	PL45175	80399		None		L10I, I13V, K14KR, G16E, K20R, E35D, M36I, R41K, R57K, L63S, H69K, K70R, L89M	A
	PL50270	93684		None		L10I, I13V, G16GE, E35D, M36I, N37D, K45R, R57K, L63S, H69K, L89M	A
Marechal (2006)	JF_076	JF_076	DQ443677	None		L10I, I13IV, E35D, M36I, R41K, K45R, R57K, L63S, I66M, H69K, L89M	A
Ndongmo (2006)	CM224	CBN_CM224	DQ394170	None		I13V, E35D, M36I, R41K, R57K, L63S, H69K, L89M, I93L	A
Vidal (2006)	NV_KTB002	02.KTB002	AM041033	None	V11I	L10I, I13V, K14R, L19P, K20I, M36I, R41K, L63S, H69K, I72V, L89M	A
	NV_LBS024	02.LBS024	AM040996	None		I13V, K14R, G16E, E35D, M36I, R41K, K45R, R57K, L63S, H69K, L89M	A
Zarandia (2006)	MZ_03GEMZ032	03GEMZ032	DQ205287	None		I13V, K14R, E35D, M36I, R41K, Q61E, L63S, H69K, L89M, I93L	A
Baker (2007)	A1025	MBA1025-180805	EF186206	None		L10I, I13V, K14R, I15V, K20I, E35D, M36I, R41K, R57K, L63S, H69K, L89M	A
Church (2007)	560-129773M	560	EF612065	None		I13V, E35D, M36I, R41K, L63S, H69K, L89M	A
	649-134513d	649	EF612094	None		I13V, E35D, M36I, R41K, K45R, R57K, L63S, H69K, L89M	A
Galluzzo (2007)	23290	RW_23290	JQ220045	None		I13V, E35D, M36I, R41K, I62V, L63S, H69K, L89M	A
	M22300	UG_M22300	JQ220143	None		I13V, K14R, I15V, E35D, M36I, R41K, K45R, R57K, L63S, H69K, L89M	A
Holguin (2007)	LP582659	LP582659	DQ009048	None		L10IV, I13V, G16E, E35D, M36I, R41K, K45R, L63S, H69K, K70R, L89M	A
	627083	627083	EF583294	None		I13V, G16E, E35D, M36I, P39T, R41K, K45R, D60E, L63S, I64IV, H69K, L89M, T91V, I93L	A
Li (2007)	PS1044	1044_d177	DQ676873	None		L10I, I13V, K14R, G16E, K20R, E35D, M36I, N37D, P39PS, R41K, K45R, R57K, L63S, H69K, K70R, L89M	A
Sanchez Onoro (2007)	582659	582659		None		L10IV, I13V, G16E, E35D, M36I, R41K, K45R, L63S, H69K, K70R, L89M	A
Church (2008)	415189-B	415189-B	EU380759	None		L10I, I13V, K14R, E35D, M36I, R41K, R57K, L63S, H69K, L89M	A
Gody (2008)	Pt041	Pt041		None		T12P, I13V, L19I, E35D, M36I, R41K, L63S, H69K, L89M	A
Land (2008)	ML752	ML752	EU110085	None		I13V, E35D, M36I, R41K, K43R, R57K, L63S, H69K, L89M	A
	ML2014	ML2014	EU110094	None		L10I, I13V, K14R, G16E, E35D, M36I, P39S, R41K, R57K, L63S, H69K, L89M	A
Ndembi (2008)	CMYD-21	04CMYD-21	DQ990394	None		E35D, M36I, R41K, I62V, L63S, H69K, L89M	A
	CMYD-30	04CMYD-30	DQ990401	None		G16A, E35D, M36I, R41K, K45R, R57K, L63S, H69K, L89M	A
Nyombi (2008)	TBK017	TBK017	EU251724	None		I13V, K14R, E35D, M36I, R41K, R57K, L63S, H69K, L89M	A
	TMS018	TMS018	EU251797	None		I13V, K14R, E35D, M36I, R41K, K45R, R57K, Q61N, L63S, H69K, L89M	A
	TMS103	TMS103	EU251808	None		I13V, E35D, M36I, R41K, K45R, R57K, L63S, H69K, L89M	A
	TMS121	TMS121	EU251821	None		G16E, E35D, M36I, R41K, K45R, L63S, H69K, L89I	A
	TMS131	TMS131	EU251829	None		L10LI, I13V, E35D, M36I, R41K, K45R, R57K, L63S, H69K, L89M	A
	TMS141	TMS141	EU251834	None		I13V, K14R, G16E, E35D, M36I, R41K, K45R, R57K, L63S, H69K, I72V, L89M	A
	TMS301	TMS301	EU251856	None		I13V, K14R, G16E, E35D, M36I, R41K, R57K, L63S, I64L, H69K, I72T, L89M	A
	TMS319	TMS319	EU251865	None		L10I, I13V, K14R, E35D, M36I, R41K, R57K, L63S, H69K, L89M	A
Somi (2008)	BG-05-704	BG-05-704	JQ616951	None		I13V, K14R, E35D, M36I, R41K, R57K, L63S, H69Q, L89M	A
	KG-05-551	KG-05-551	JQ616956	None		I13V, K14R, E35D, M36I, R41K, K45R, R57K, L63S, H69K, L89M	A
	OY-05-344	OY-05-344	JQ616970	None		K14T, I15V, L19I, M36I, N37S, R41K, L63S, H69K, L89M, I93L	A
	KG-05-113	KG-05-113	JQ616975	None		I13V, E35D, M36I, R57K, L63S, H69K, L89M	A
Eshleman (2009)	J30993R9	07-156967	FJ389080	None		I13V, G16E, K20R, E35D, M36I, P39S, R41K, K43R, K45R, R57K, L63S, H69K, L89M	A
	G50484R9	08-102902	FJ389153	None		I13V, E35D, M36I, R41K, K45R, R57K, L63S, H69K, L89M	A
Hawkins (2009)	P649	ZZP649	FJ931153	None		I13V, K20KR, E35D, M36I, R41K, K45KR, R57K, L63S, H69K, L89M	A
Koyalta (2009)	40	TCHAD-40	FJ688187	None		L10I, I13V, K14R, I15V, G16E, L19T, K20I, M36I, R41K, L63S, H69N, L89M	A
	59	TCHAD-59	FJ688193	None		L10V, I13V, L19P, K20I, E35D, M36I, R41K, L63S, H69K, L89M	A
Vercauteren (2009)	pt1931	1684477930	GQ399093	None		T12A, I13V, K14R, E35D, M36I, R41K, K45KR, R57K, L63S, H69K, L89M	A
	pt1896	1939079404	GQ399128	None		I13V, K14R, E35D, M36I, R41K, K45R, R57K, L63S, H69K, L89M	A
	pt1690	3200422520	GQ399334	None		I13V, K14R, E35D, M36I, R41K, K45R, R57K, L63S, I64L, H69K, L89M	A
	pt1658	3398167388	GQ399366	None		I15V, L19P, E35D, M36I, R41K, K45R, R57K, L63S, H69K, L89M	A
	pt1367	5024434105	GQ399657	None		L10M, I13V, G16E, E35D, M36I, N37D, L63S, E65D, H69K, K70KR, L89M	A
	pt1302	5399654061	GQ399722	None		I13V, E35D, M36I, R57K, I62IV, L63S, H69K, L89M	A
	pt1274	5534057418	GQ399750	None		K14R, I15V, G16E, E35D, M36I, R41K, R57K, L63S, H69K	A
	pt1154	6251960207	GQ399870	None		I13V, I15V, E35D, M36I, R41K, K45R, R57K, L63S, H69K, L89M, N98NI	A
	pt946	7577549413	GQ400078	None		I13V, K14R, E35D, M36I, R57K, L63S, H69K, L89M	A
	pt903	7841782356	GQ400121	None		I13V, E35D, M36I, R57K, L63S, H69K, L89M	A
	pt883	7919903120	GQ400141	None		I13V, K14R, E35D, M36I, R57K, L63S, H69K, L89M	A
	pt699	8891941325	GQ400325	None		I13IV, E35D, M36MI, R57RK, L63S, H69K, L89M, T91P	A
	pt621	9279413745	GQ400403	None		I13V, K14KR, I15V, K20I, M36I, R41K, L63S, I64L, H69K, K70KR, I72M, L89M	A
	pt476	a74K8Cmi1w	GQ400548	None		G17E, K20R, E35D, M36I, P39PS, R41K, K45R, R57K, L63S, H69K, L89M	A
Yaotse (2009)	HT055	06TG.HT055	FM955692	None		I13V, K14R, E35D, M36I, R41K, L63S, I64M, H69K, I72V, V77I, L89M	A
Balode (2010)	S2316	S2316	GU945179	None		E35D, M36I, R41K, L63S, I64M, H69K, L89M, I93L	A
Djoko (2010)	628	CD0062	FR666628	None		T4TS, L10I, I13V, K14R, M36I, R41K, L63S, I64L, H69K, L89M	A
Mosha (2010)	S21Pol	S21Pol	JQ071467	None		L10IV, I13V, K14KN, G16GE, E35D, M36I, K45R, R57K, L63S, H69K, L89M	A
	S24Pol	S24Pol	JQ071470	None		I13V, E35D, M36I, R41K, K45R, R57K, L63S, I64M, H69K, L89M	A
	S65Pol	S65Pol	JQ071484	None		I13IV, K14R, G16E, K20R, E35D, M36I, P39S, R41K, R57K, I62V, L63S, H69K, L89M	A
Ndembi (2010)	13305D_P1	13305	GQ409552	None		I13V, E35D, M36I, R41K, R57K, L63S, H69K, L89M	A
	14188D_P1	14188	GQ409564	None		L10I, I13V, K14R, K20KR, E35D, M36I, R41K, R57K, I62V, L63S, H69K, L89M	A
	15712D_P1	15712	GQ409577	None		L10I, I13V, E35D, M36I, R41K, I62V, L63S, H69Q, L89M	A
Selimova (2010)	12MOS	12MOS	HM345546	None		I13V, E35E_D, M36I, R41K, L63S, H69K, V77I, I93L	A
Soares (2010)	CM04_093	CM04_093	GU366142	None		L10I, I13V, K20R, E35D, M36I, N37D, R41K, L63S, C67S, H69K, L89M	A
Tovanabutra (2010)	KECst_007	KECst_007	FJ623476	None		L10I, I13V, K14R, G16E, E35D, M36I, P39S, R41K, R57K, L63S, H69K, L89M	A
Towler (2010)	10	350052-R	HM037822	None		L10I, I13V, G16E, E35D, M36I, R41K, R57K, L63S, H69K, L89M	A
		431730-B	HM037889	None		L10I, I13V, G16E, E35D, M36I, R41K, R57K, L63S, H69K, L89M	A
		516673-E	HM037901	None		L10I, I13V, G16E, E35D, M36I, R41K, R57K, L63S, H69K, L89M	A
	328958-W	328958-W	HM037847	None		L10V, I13V, K14R, T31TA, E35D, M36I, R41K, K45R, R57K, L63S, H69K, L89M	A
Vinogradova (2010)	Dag11	Dag11	GQ867632	None		I13V, E35D, M36I, R41K, L63S, I64M, H69K, V77I, L89M, I93L	A
Yebra (2010)	311022	06SP0311022	FJ481651	None		I13V, K14R, E35D, M36I, N37D, R41K, R57RK, L63S, I64IM, H69K, L89M, I93L	A
Hamers (2011)	CP076301609	CP076301609	HQ993646	None		I13V, G16E, K20R, E35D, M36I, R41K, Q61N, L63S, G68E, H69K, K70R, L89IM, T91V, I93L	A
	CP076301622	CP076301622	HQ993658	None		L10I, I13V, G16E, E35D, M36I, P39ST, R41K, K45R, R57K, L63S, H69K, L89M	A
	CP076301701	CP076301701	HQ993696	None		I13V, E35D, M36I, R41K, K45R, R57K, L63S, H69K, L89M	A
	CP076301747	CP076301747	HQ993737	None		G16E, M36X, R41K, K45R, R57K, L63S, H69K, L89M	A
	CP076301756	CP076301756	HQ993745	None		L10V, I13V, I15V, E35D, M36I, R41K, R57K, L63S, H69K, L89M	A
	CP076301773	CP076301773	HQ993759	None		P9PFLS, E35D, M36I, N37D, R57K, L63S, H69K, L89M	A
	CP076302217	CP076302217	HQ993764	None		L10I, I13V, E35D, M36I, R41K, R57K, L63S, H69K, K70R, L89M	A
	CP076301653	CP076301653	HQ993796	None		K14R, E35D, M36I, N37D, R41K, R57K, I62V, L63S, H69K, K70R, V82VI, L89M	A
	CP076302220	CP076302220	HQ993812	None		K14R, E35D, M36I, N37DE, R41K, R57K, I62IV, L63S, H69K, K70R, L89M	A
	CP076302300	CP076302300	HQ993847	None		I13V, K14R, E35D, M36I, N37ND, R41K, R57K, L63S, H69K, L89M	A
	CP076302333	CP076302333	HQ993873	None		I13V, G16E, K20R, E35D, M36I, R41K, L63S, H69K, L89M, T91V, I93L	A
	CP076304166	CP076304166	HQ993885	None		T4P, W6M, P9C, I13V, Q18H, E35D, M36I, R41K, R57K, I62V, L63S, I64IM, H69K, I72IM, L89M	A
	CP076304197	CP076304197	HQ993901	None		I13IV, K14KR, G16GE, L19LIV, E35D, M36I, N37D, R41K, R57K, L63S, E65D, H69K, L89M	A
	CP076304204	CP076304204	HQ993906	None		L10V, I13V, K20R, E35D, M36I, R41K, K45R, R57K, L63S, H69K, L89M	A
	CP076304239	CP076304239	HQ993932	None	L33I	I13V, K20R, E35D, M36I, R41K, R57K, D60E, Q61E, I62V, L63S, H69K, L89M	A
	CP076304266	CP076304266	HQ993954	None		L19I, E35D, M36I, R41K, R57K, L63S, H69K, L89M	A
	CP076304479	CP076304479	HQ993973	None		L10V, I13IV, G16E, E35D, M36I, R41K, K45R, R57K, L63S, H69K, L89M	A
	CP076300724	CP076300724	HQ994927	None		L10I, I13V, G16E, E35D, M36I, P39S, R41K, K45R, R57K, L63S, H69K, K70R, L89M	A
	CP076300767	CP076300767	HQ994938	None		I13V, I15V, G16E, K20R, M36I, R41K, R57K, L63S, E65ED, H69K, L89I	A
	CP076300811	CP076300811	HQ994945	None		L10I, I13V, G16E, E35D, M36I, R41K, K45R, L63S, H69K, L89M	A
	CP076300818	CP076300818	HQ994948	None		L10V, I13V, G16E, E35D, M36I, R41K, K45R, R57K, L63S, H69K, K70R, L89M	A
	CP076300833	CP076300833	HQ994953	None		T12P, I13V, G16E, E35D, M36I, R41K, I62V, L63S, H69K, L89M	A
	CP076301854	CP076301854	HQ994995	None		I13V, E35D, M36I, R41K, R57K, L63S, H69K, L89M	A
	CP076301874	CP076301874	HQ995006	None		I13V, I15V, E35D, M36I, R41K, K45R, R57K, L63S, H69K, L89M	A
	CP076302061	CP076302061	HQ995024	None		I13V, E35D, M36I, R41K, R57K, L63S, I64M, H69K, L89IM	A
	CP076302072	CP076302072	HQ995032	None		I13V, G16E, E35D, M36I, K45R, R57K, L63S, H69K, V77I, L89M	A
	CP076302948	CP076302948	HQ995044	None		L10I, T12K, I13V, G16E, E35D, M36I, R41K, R57K, L63S, H69Q, L89M	A
	CP076303002	CP076303002	HQ995070	None		I13V, E35D, M36I, R41K, R57K, L63S, H69K, L89M	A
	CP076303017	CP076303017	HQ995081	None		L10V, I13V, G16E, E35D, M36I, R41K, K45R, R57K, L63S, H69K, L89M	A
	CP076300809	CP076300809	HQ995103	None		I13V, K14R, E35D, M36I, R41K, R57K, L63S, H69K, V77I, L89M	A
	CP076300810	CP076300810	HQ995104	None	L10LF	L19I, K20R, E35D, M36I, R41K, R57K, L63S, H69K, L89M	A
	CP076300878	CP076300878	HQ995133	None		I13V, G16E, K20IM, E35N, M36I, R41K, L63S, H69K, V77VI, L89M	A
	CP076300895	CP076300895	HQ995141	None		I13V, E35D, M36I, R41K, R57K, L63S, H69K, L89M	A
	CP076301789	CP076301789	HQ995145	None		L10V, I13V, G16E, K20R, E35D, M36I, R41K, K45R, R57K, L63S, H69K, L89M	A
	CP076301790	CP076301790	HQ995146	None		L10I, T12K, I13V, G16E, E35D, M36I, R41K, R57K, L63S, H69Q, L89M	A
	CP076303038	CP076303038	HQ995223	None		I13V, E35D, M36I, R41K, K45R, R57K, L63S, H69K, L89M	A
	CP076303100	CP076303100	HQ995276	None		L10V, I13V, K14R, G16A, E35D, M36I, R41K, R57K, L63S, H69K, L89M	A
	CP076303104	CP076303104	HQ995280	None	L33F	I13V, M36I, R41K, R57K, I62V, L63S, H69K, L89M	A
	CP076300756	CP076300756	HQ995332	None		I13V, K14R, E35D, M36I, R41K, L63S, H69K, L89M	A
	CP076300757	CP076300757	HQ995333	None		I13V, G16E, E35D, M36I, R41K, K45R, R57K, L63S, I64M, H69K, K70R, L89M	A
	CP076300785	CP076300785	HQ995349	None		I13V, K14R, E35D, M36I, N37NK, R41K, R57K, L63S, H69K, L89M	A
	CP076301906	CP076301906	HQ995381	None		T12A, I13V, I15V, E35D, M36I, N37D, R41K, K45R, L63S, H69K, L89M	A
	CP076302036	CP076302036	HQ995460	None		I13V, K20KR, E35D, M36I, R41K, R57RK, I62V, L63S, H69K, L89M	A
	CP076302925	CP076302925	HQ995483	None		L10I, I13V, G16E, E35D, M36I, P39S, R41K, K45R, L63S, H69K, L89M	A
Kasang (2011)	32657	32657	HM572367	None		T12P, I13V, K14R, G16E, E35D, M36I, R41K, W42W*, L63S, H69K, G86GE, L89I	A
	17180	17180	HM572372	None		I13V, E35D, M36I, R41K, K45R, R57K, L63S, H69K, L89M	A
	22112	22112	HM572373	None		I13V, E35D, M36I, R41K, R57K, L63S, H69K, K70R, I72T, L89M	A
	17177	17177	HM572376	None		I13V, E35D, M36I, R41K, K45R, R57K, L63S, H69K, L89M	A
	6021	6021	HM572390	None		I13V, E35D, M36I, R41K, R57K, L63S, H69K, L89M	A
	32660	32660	HM572416	None		T12TA, I13V, E35D, M36I, R41K, K45KR, R57K, L63S, H69K, L89M	A
Ndembi (2011)	NTCPS719	NTCPS719	HQ702627	None		L10I, I13V, K14R, I15V, E35D, M36I, R41K, R57K, L63S, H69K, L89M	A
	NTCPS701	NTCPS701	HQ702669	None		I13V, K14R, E35D, M36I, R41K, R57K, I62V, L63S, H69K, T74S, L89M	A
Caron (2012)	Gab051112	Gab051112	JN704994	None		I13V, E35D, M36I, R41K, K45R, L63S, H69K, L89M	A
De Gascun (2012)	IRL05105	IRL05105	JN622278	None		L10I, T12X, I13IV, G16GE, Q18QH, E35D, M36I, R57K, L63S, H69K, L89M	A
Hassan (2012)	RS09000860	RS09000860	HQ441605	None		I13V, K14R, I15IV, E35D, M36I, R41K, R57K, L63S, H69K, L89M	A
	RS09000873	RS09000873	HQ441618	None		I13V, K14R, E35D, M36I, R41K, R57K, L63S, H69K, L89M	A
	RS09000902	RS09000902	HQ441647	None		I13V, E35D, M36I, R41K, R57K, I62V, L63S, I64L, H69K, L89M	A
	RS09000929	RS09000929	HQ441671	None		T12P, I13V, G16E, K20R, E35D, M36I, N37NS, R41K, Q61N, L63S, G68E, H69K, K70R, L89M, T91V, I93L	A
	RS09000938	RS09000938	HQ441680	None		I13V, E35D, M36I, R41K, K45KR, R57K, L63S, H69K, L89M	A
	RS09000942	RS09000942	HQ441684	None		I13V, K14R, K20KR, E35D, M36I, R41K, R57K, Q61HN, L63S, H69K, L89M	A
	RS09000965	RS09000965	HQ441703	None	L33I	I13V, E35D, M36I, R41K, K45R, R57K, L63S, G68DE, H69R, L89M	A
	RS09000977	RS09000977	HQ441713	None		L10V, I13V, G16E, E35D, M36I, N37D, R41K, R57K, D60E, L63S, H69K, K70R, V77VI, L89M	A
	RS11000256	RS11000256	JQ698355	None	V11I	L10I, I13V, E35D, M36I, R41K, R57K, I62V, L63S, I64L, H69K, L89M	A
	RS11000356	RS11000356	JQ698425	None		I13V, L19I, E35D, M36I, R41K, R57K, L63S, H69K, L89M	A
Karlsson (2012)	SE_15	SE_15	JQ698676	None		L10I, I13V, I15V, G16E, E35D, M36I, R41K, K45R, R57K, L63S, H69K, K70R, L89M	A
	SE_240	SE_240	JQ698834	None		L10V, I13V, I15V, G16E, E35D, M36I, R41K, K45R, R57K, L63S, H69K, K70KR, L89M	A
Nazziwa (2012)	1044801	1044801	JX498973	None		I13V, E35D, M36I, R41K, K45R, R57K, L63S, H69K, L89M	A
	3058001	3058001	JX498994	None		L10I, I13V, E35D, M36I, R41K, K43R, L63S, C67F, H69K, L89M	A
Sigaloff (2012)	KELKN251	KELKN251	JN628514	None		I13V, L19P, K20I, E35D, M36I, R41K, K45R, R57K, L63S, E65D, H69K, V77I, L89M	A
	KELKN252	KELKN252	JN628515	None		I13V, L19P, K20I, E35D, M36I, R41K, K45R, R57K, L63S, E65D, H69K, L89M	A
	KELKN264	KELKN264	JN628522	None		E35D, M36I, N37E, R41K, K45R, R57K, I62V, L63S, H69K, A71T, I72T	A
Ssemwanga (2012)	RCC_TDR_480117	RCC_TDR_480117	JQ266056	None		I13V, K14R, E35D, M36I, N37E, R41K, R57K, L63S, H69K, L89M	A
	RCC_TDR_482400	RCC_TDR_482400	JQ266059	None		I13V, K14R, E35D, M36I, N37E, R41K, R57K, L63S, H69K, L89M	A
	RCC_TDR_482363	RCC_TDR_482363	JQ266065	None		I13V, K14R, E35D, M36I, N37E, R41K, R57K, L63S, H69K, L89M	A
	RCC_TDR_358497	RCC_TDR_358497	JQ266090	None		I13V, E35D, M36I, R41K, K45R, R57K, L63S, H69K, L89M	A
Ssemwanga (2012)	3132HR	3132HR	JF800196	None		L10V, T12V, I13V, G16E, E35D, M36I, R41K, R57K, L63S, H69K, L89M	A
Yang (2012)	KN-91	KN-91	JQ616937	None		T12S, I13V, K14N, E35D, M36I, R41K, K45R, R57K, L63S, H69K, L89M	A
Frentz (2013)	EHR-01921	EHR-01921	JX299577	None		L10I, I13V, K14R, I15V, G16E, L19P, K20I, E35N, M36I, R41K, K45R, R57K, L63S, H69K, K70R, L89M	A
	EHR-13208	EHR-13208	JX299753	None		I13V, E35D, M36I, R41K, K43R, R57K, L63S, H69K, I72M, L89M	A
	EHR-14940	EHR-14940	JX299787	None		L10V, I13V, K14R, E35D, M36I, R41K, K45R, R57K, L63S, H69K, K70R, L89M	A
	EHR-41871	EHR-41871	JX300248	None		E35D, M36I, N37D, R41K, L63S, H69K, L89M	A

Protease Inhibitors

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