<!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

Protease Inhibitors

Subtype A
Gene PR
Mutation L63S
Rx PI-naive
IncludeMixtures No
References 74
Patients 212
Isolates 215
 
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Sequences matching input query are shown below. Original reference, patient identifier, isolate name, partial treatment histories and accession number are indicated. Complete treatment histories, when available, can be accessed by clicking the isolate name. Sequences may additionally be downloaded in the fasta format, or viewed as individual or composite alignments using the options above. If the user wishes to view individual alignments of isolates for which there are multiple clones, the user can choose to view either an alignment of consensus sequences derived from the clones or an alignment of each clone as well as a consensus sequence.

Author (yr) Patient Isolate Acc# PIs WksPIMajorDRMs PIMinorDRMs OtherMutSubtype
Carr (1999)SE8891SE8891AF069673None   I13V, I15V, E35D, M36I, R41K, K43R, R57K, L63S, H69K, L89MA
 SE8538SE8538AF069669None   I13V, I15V, E35D, M36I, R41K, K43R, R57K, L63S, H69K, L89MA
Ellenberger (1999)El-IC3642IC3642AF000489None  I47MI13V, K14R, K20I, A22P, E35K, M36I, R41K, L63S, I64L, H69K, L89MA
Nkengasong (2000)JN_IC105JN_IC105AF216980None   I13V, K14R, K20I, E35D, M36I, R41K, L63S, H69K, I72V, L89MA
Eshleman (2001)SE653SE653AF388109None   T12I, I13V, K14KR, I15V, G17E, K20I, E35D, M36I, R41K, R57K, L63S, I64L, H69K, L89MA
 SE649SE649AF388107None   I13IV, L19LI, E35D, M36I, R41K, K45R, R57K, L63S, H69K, L89MA
Dowling (2002)KNH1135KNH1135AF457065None   L10I, I13V, G16E, K20R, E35D, M36I, P39S, R41K, K45R, R57K, D60E, L63S, H69K, L89MA
 KER2008KER2008AF457052None   L10V, I13V, I15V, Q18E, L19M, K20R, E35D, M36I, R41K, R57K, I62V, L63S, H69K, L89MA
Eshleman (2002)125636u125636uAF410213None   I13V, E35D, M36I, R41K, R57RK, L63S, H69K, V77I, L89MA
 132318b132318bAF410221None   I13V, K20R, E35D, M36I, R41K, K45R, R57K, L63S, H69K, L89MA
 137499q137499qAF410228None   L10LI, I13IV, K14R, I15IV, E35D, M36I, R41K, K45R, R57K, L63S, H69K, L89MA
Fonjungo (2002)CM215CM215AF406719None   I13V, K20R, E35D, M36I, N37D, R41K, L63S, H69K, L89M, I93LA
Arroyo (2004)01TZA19501TZA195AY253306None   I13V, K14R, Q18L, E35D, M36I, R41K, K45R, R57K, L63S, H69K, L89MA
 01TZA35901TZA359AY253319None   T12S, L19V, K20R, E35D, M36I, R41K, R57K, L63S, H69K, L89MA
Eshleman (2004)ESH_Pat69ESH560AY435303None   I13V, E35D, M36I, R41K, L63S, H69K, L89MA
Fang (2004)ML752_3_1997752_3_1997AY322193None   I13V, E35D, M36I, R41K, R57K, L63S, H69K, L89MA
Konings (2004)KF_Pat10001CM5184AY359782None   I13V, E35N, M36I, N37D, R41K, R57K, L63S, H69K, L89MA
Servais (2004)SJ_Pat10SJKLM017AJ412944None   L10I, T12TP, K14R, E35D, M36I, R41K, R57K, L63S, H69K, L89MA
 SJ_Pat17SJKLM036AJ412959None   I13V, E35D, M36I, R41K, K45R, R57K, L63S, H69K, L89MA
Snoeck (2004)BE48BE48AY900749None   I13V, E35D, M36I, R41K, K45R, R57K, L63S, H69K, L89MA
Carr (2005)01NGPL49001NGPL490DQ013273None   L10I, I13V, K14R, K20I, E35Q, M36I, R41K, R57K, L63S, C67E, H69K, V82I, L89MA
Ciccozzi (2005)MC_AY611658A55AY611658None   I13V, E35D, M36I, R41K, K45R, R57K, L63S, H69K, L89MA
 MC_AY611696A61AY611696None   L10V, I13V, E35D, M36I, R41K, K45R, R57K, L63S, C67Y, H69K, L89MA
 MC_AY611712A32AY611712None   I13V, E35D, M36I, R41K, K45R, R57K, L63S, H69K, L89MA
 MC_AY611714A40AY611714None   L10V, I13V, E35D, M36I, R41K, K45R, R57K, L63S, C67Y, H69K, L89MA
K'Aluoch (2005)OK_TC021704TC021704DQ079834None   T12TA, I13V, K14KR, G16GE, E35D, M36I, R41K, R57K, L63S, H69K, L89MA
Non-B Workgroup (2005)PL4517580399 None   L10I, I13V, K14KR, G16E, K20R, E35D, M36I, R41K, R57K, L63S, H69K, K70R, L89MA
 PL5027093684 None   L10I, I13V, G16GE, E35D, M36I, N37D, K45R, R57K, L63S, H69K, L89MA
Marechal (2006)JF_076JF_076DQ443677None   L10I, I13IV, E35D, M36I, R41K, K45R, R57K, L63S, I66M, H69K, L89MA
Ndongmo (2006)CM224CBN_CM224DQ394170None   I13V, E35D, M36I, R41K, R57K, L63S, H69K, L89M, I93LA
Vidal (2006)NV_KTB00202.KTB002AM041033None  V11IL10I, I13V, K14R, L19P, K20I, M36I, R41K, L63S, H69K, I72V, L89MA
 NV_LBS02402.LBS024AM040996None   I13V, K14R, G16E, E35D, M36I, R41K, K45R, R57K, L63S, H69K, L89MA
Zarandia (2006)MZ_03GEMZ03203GEMZ032DQ205287None   I13V, K14R, E35D, M36I, R41K, Q61E, L63S, H69K, L89M, I93LA
Baker (2007)A1025MBA1025-180805EF186206None   L10I, I13V, K14R, I15V, K20I, E35D, M36I, R41K, R57K, L63S, H69K, L89MA
Church (2007)560-129773M560EF612065None   I13V, E35D, M36I, R41K, L63S, H69K, L89MA
 649-134513d649EF612094None   I13V, E35D, M36I, R41K, K45R, R57K, L63S, H69K, L89MA
Galluzzo (2007)23290RW_23290JQ220045None   I13V, E35D, M36I, R41K, I62V, L63S, H69K, L89MA
 M22300UG_M22300JQ220143None   I13V, K14R, I15V, E35D, M36I, R41K, K45R, R57K, L63S, H69K, L89MA
Holguin (2007)LP582659LP582659DQ009048None   L10IV, I13V, G16E, E35D, M36I, R41K, K45R, L63S, H69K, K70R, L89MA
 627083627083EF583294None   I13V, G16E, E35D, M36I, P39T, R41K, K45R, D60E, L63S, I64IV, H69K, L89M, T91V, I93LA
Li (2007)PS10441044_d177DQ676873None   L10I, I13V, K14R, G16E, K20R, E35D, M36I, N37D, P39PS, R41K, K45R, R57K, L63S, H69K, K70R, L89MA
Sanchez Onoro (2007)582659582659 None   L10IV, I13V, G16E, E35D, M36I, R41K, K45R, L63S, H69K, K70R, L89MA
Church (2008)415189-B415189-BEU380759None   L10I, I13V, K14R, E35D, M36I, R41K, R57K, L63S, H69K, L89MA
Gody (2008)Pt041Pt041 None   T12P, I13V, L19I, E35D, M36I, R41K, L63S, H69K, L89MA
Land (2008)ML752ML752EU110085None   I13V, E35D, M36I, R41K, K43R, R57K, L63S, H69K, L89MA
 ML2014ML2014EU110094None   L10I, I13V, K14R, G16E, E35D, M36I, P39S, R41K, R57K, L63S, H69K, L89MA
Ndembi (2008)CMYD-2104CMYD-21DQ990394None   E35D, M36I, R41K, I62V, L63S, H69K, L89MA
 CMYD-3004CMYD-30DQ990401None   G16A, E35D, M36I, R41K, K45R, R57K, L63S, H69K, L89MA
Nyombi (2008)TBK017TBK017EU251724None   I13V, K14R, E35D, M36I, R41K, R57K, L63S, H69K, L89MA
 TMS018TMS018EU251797None   I13V, K14R, E35D, M36I, R41K, K45R, R57K, Q61N, L63S, H69K, L89MA
 TMS103TMS103EU251808None   I13V, E35D, M36I, R41K, K45R, R57K, L63S, H69K, L89MA
 TMS121TMS121EU251821None   G16E, E35D, M36I, R41K, K45R, L63S, H69K, L89IA
 TMS131TMS131EU251829None   L10LI, I13V, E35D, M36I, R41K, K45R, R57K, L63S, H69K, L89MA
 TMS141TMS141EU251834None   I13V, K14R, G16E, E35D, M36I, R41K, K45R, R57K, L63S, H69K, I72V, L89MA
 TMS301TMS301EU251856None   I13V, K14R, G16E, E35D, M36I, R41K, R57K, L63S, I64L, H69K, I72T, L89MA
 TMS319TMS319EU251865None   L10I, I13V, K14R, E35D, M36I, R41K, R57K, L63S, H69K, L89MA
Somi (2008)BG-05-704BG-05-704JQ616951None   I13V, K14R, E35D, M36I, R41K, R57K, L63S, H69Q, L89MA
 KG-05-551KG-05-551JQ616956None   I13V, K14R, E35D, M36I, R41K, K45R, R57K, L63S, H69K, L89MA
 OY-05-344OY-05-344JQ616970None   K14T, I15V, L19I, M36I, N37S, R41K, L63S, H69K, L89M, I93LA
 KG-05-113KG-05-113JQ616975None   I13V, E35D, M36I, R57K, L63S, H69K, L89MA
Eshleman (2009)J30993R907-156967FJ389080None   I13V, G16E, K20R, E35D, M36I, P39S, R41K, K43R, K45R, R57K, L63S, H69K, L89MA
 G50484R908-102902FJ389153None   I13V, E35D, M36I, R41K, K45R, R57K, L63S, H69K, L89MA
Hawkins (2009)P649ZZP649FJ931153None   I13V, K20KR, E35D, M36I, R41K, K45KR, R57K, L63S, H69K, L89MA
Koyalta (2009)40TCHAD-40FJ688187None   L10I, I13V, K14R, I15V, G16E, L19T, K20I, M36I, R41K, L63S, H69N, L89MA
 59TCHAD-59FJ688193None   L10V, I13V, L19P, K20I, E35D, M36I, R41K, L63S, H69K, L89MA
Vercauteren (2009)pt19311684477930GQ399093None   T12A, I13V, K14R, E35D, M36I, R41K, K45KR, R57K, L63S, H69K, L89MA
 pt18961939079404GQ399128None   I13V, K14R, E35D, M36I, R41K, K45R, R57K, L63S, H69K, L89MA
 pt16903200422520GQ399334None   I13V, K14R, E35D, M36I, R41K, K45R, R57K, L63S, I64L, H69K, L89MA
 pt16583398167388GQ399366None   I15V, L19P, E35D, M36I, R41K, K45R, R57K, L63S, H69K, L89MA
 pt13675024434105GQ399657None   L10M, I13V, G16E, E35D, M36I, N37D, L63S, E65D, H69K, K70KR, L89MA
 pt13025399654061GQ399722None   I13V, E35D, M36I, R57K, I62IV, L63S, H69K, L89MA
 pt12745534057418GQ399750None   K14R, I15V, G16E, E35D, M36I, R41K, R57K, L63S, H69KA
 pt11546251960207GQ399870None   I13V, I15V, E35D, M36I, R41K, K45R, R57K, L63S, H69K, L89M, N98NIA
 pt9467577549413GQ400078None   I13V, K14R, E35D, M36I, R57K, L63S, H69K, L89MA
 pt9037841782356GQ400121None   I13V, E35D, M36I, R57K, L63S, H69K, L89MA
 pt8837919903120GQ400141None   I13V, K14R, E35D, M36I, R57K, L63S, H69K, L89MA
 pt6998891941325GQ400325None   I13IV, E35D, M36MI, R57RK, L63S, H69K, L89M, T91PA
 pt6219279413745GQ400403None   I13V, K14KR, I15V, K20I, M36I, R41K, L63S, I64L, H69K, K70KR, I72M, L89MA
 pt476a74K8Cmi1wGQ400548None   G17E, K20R, E35D, M36I, P39PS, R41K, K45R, R57K, L63S, H69K, L89MA
Yaotse (2009)HT05506TG.HT055FM955692None   I13V, K14R, E35D, M36I, R41K, L63S, I64M, H69K, I72V, V77I, L89MA
Balode (2010)S2316S2316GU945179None   E35D, M36I, R41K, L63S, I64M, H69K, L89M, I93LA
Djoko (2010)628CD0062FR666628None   T4TS, L10I, I13V, K14R, M36I, R41K, L63S, I64L, H69K, L89MA
Mosha (2010)S21PolS21PolJQ071467None   L10IV, I13V, K14KN, G16GE, E35D, M36I, K45R, R57K, L63S, H69K, L89MA
 S24PolS24PolJQ071470None   I13V, E35D, M36I, R41K, K45R, R57K, L63S, I64M, H69K, L89MA
 S65PolS65PolJQ071484None   I13IV, K14R, G16E, K20R, E35D, M36I, P39S, R41K, R57K, I62V, L63S, H69K, L89MA
Ndembi (2010)13305D_P113305GQ409552None   I13V, E35D, M36I, R41K, R57K, L63S, H69K, L89MA
 14188D_P114188GQ409564None   L10I, I13V, K14R, K20KR, E35D, M36I, R41K, R57K, I62V, L63S, H69K, L89MA
 15712D_P115712GQ409577None   L10I, I13V, E35D, M36I, R41K, I62V, L63S, H69Q, L89MA
Selimova (2010)12MOS12MOSHM345546None   I13V, E35E_D, M36I, R41K, L63S, H69K, V77I, I93LA
Soares (2010)CM04_093CM04_093GU366142None   L10I, I13V, K20R, E35D, M36I, N37D, R41K, L63S, C67S, H69K, L89MA
Tovanabutra (2010)KECst_007KECst_007FJ623476None   L10I, I13V, K14R, G16E, E35D, M36I, P39S, R41K, R57K, L63S, H69K, L89MA
Towler (2010)10350052-RHM037822None   L10I, I13V, G16E, E35D, M36I, R41K, R57K, L63S, H69K, L89MA
  431730-BHM037889None   L10I, I13V, G16E, E35D, M36I, R41K, R57K, L63S, H69K, L89MA
  516673-EHM037901None   L10I, I13V, G16E, E35D, M36I, R41K, R57K, L63S, H69K, L89MA
 328958-W328958-WHM037847None   L10V, I13V, K14R, T31TA, E35D, M36I, R41K, K45R, R57K, L63S, H69K, L89MA
Vinogradova (2010)Dag11Dag11GQ867632None   I13V, E35D, M36I, R41K, L63S, I64M, H69K, V77I, L89M, I93LA
Yebra (2010)31102206SP0311022FJ481651None   I13V, K14R, E35D, M36I, N37D, R41K, R57RK, L63S, I64IM, H69K, L89M, I93LA
Hamers (2011)CP076301609CP076301609HQ993646None   I13V, G16E, K20R, E35D, M36I, R41K, Q61N, L63S, G68E, H69K, K70R, L89IM, T91V, I93LA
 CP076301622CP076301622HQ993658None   L10I, I13V, G16E, E35D, M36I, P39ST, R41K, K45R, R57K, L63S, H69K, L89MA
 CP076301701CP076301701HQ993696None   I13V, E35D, M36I, R41K, K45R, R57K, L63S, H69K, L89MA
 CP076301747CP076301747HQ993737None   G16E, M36X, R41K, K45R, R57K, L63S, H69K, L89MA
 CP076301756CP076301756HQ993745None   L10V, I13V, I15V, E35D, M36I, R41K, R57K, L63S, H69K, L89MA
 CP076301773CP076301773HQ993759None   P9PFLS, E35D, M36I, N37D, R57K, L63S, H69K, L89MA
 CP076302217CP076302217HQ993764None   L10I, I13V, E35D, M36I, R41K, R57K, L63S, H69K, K70R, L89MA
 CP076301653CP076301653HQ993796None   K14R, E35D, M36I, N37D, R41K, R57K, I62V, L63S, H69K, K70R, V82VI, L89MA
 CP076302220CP076302220HQ993812None   K14R, E35D, M36I, N37DE, R41K, R57K, I62IV, L63S, H69K, K70R, L89MA
 CP076302300CP076302300HQ993847None   I13V, K14R, E35D, M36I, N37ND, R41K, R57K, L63S, H69K, L89MA
 CP076302333CP076302333HQ993873None   I13V, G16E, K20R, E35D, M36I, R41K, L63S, H69K, L89M, T91V, I93LA
 CP076304166CP076304166HQ993885None   T4P, W6M, P9C, I13V, Q18H, E35D, M36I, R41K, R57K, I62V, L63S, I64IM, H69K, I72IM, L89MA
 CP076304197CP076304197HQ993901None   I13IV, K14KR, G16GE, L19LIV, E35D, M36I, N37D, R41K, R57K, L63S, E65D, H69K, L89MA
 CP076304204CP076304204HQ993906None   L10V, I13V, K20R, E35D, M36I, R41K, K45R, R57K, L63S, H69K, L89MA
 CP076304239CP076304239HQ993932None  L33II13V, K20R, E35D, M36I, R41K, R57K, D60E, Q61E, I62V, L63S, H69K, L89MA
 CP076304266CP076304266HQ993954None   L19I, E35D, M36I, R41K, R57K, L63S, H69K, L89MA
 CP076304479CP076304479HQ993973None   L10V, I13IV, G16E, E35D, M36I, R41K, K45R, R57K, L63S, H69K, L89MA
 CP076300724CP076300724HQ994927None   L10I, I13V, G16E, E35D, M36I, P39S, R41K, K45R, R57K, L63S, H69K, K70R, L89MA
 CP076300767CP076300767HQ994938None   I13V, I15V, G16E, K20R, M36I, R41K, R57K, L63S, E65ED, H69K, L89IA
 CP076300811CP076300811HQ994945None   L10I, I13V, G16E, E35D, M36I, R41K, K45R, L63S, H69K, L89MA
 CP076300818CP076300818HQ994948None   L10V, I13V, G16E, E35D, M36I, R41K, K45R, R57K, L63S, H69K, K70R, L89MA
 CP076300833CP076300833HQ994953None   T12P, I13V, G16E, E35D, M36I, R41K, I62V, L63S, H69K, L89MA
 CP076301854CP076301854HQ994995None   I13V, E35D, M36I, R41K, R57K, L63S, H69K, L89MA
 CP076301874CP076301874HQ995006None   I13V, I15V, E35D, M36I, R41K, K45R, R57K, L63S, H69K, L89MA
 CP076302061CP076302061HQ995024None   I13V, E35D, M36I, R41K, R57K, L63S, I64M, H69K, L89IMA
 CP076302072CP076302072HQ995032None   I13V, G16E, E35D, M36I, K45R, R57K, L63S, H69K, V77I, L89MA
 CP076302948CP076302948HQ995044None   L10I, T12K, I13V, G16E, E35D, M36I, R41K, R57K, L63S, H69Q, L89MA
 CP076303002CP076303002HQ995070None   I13V, E35D, M36I, R41K, R57K, L63S, H69K, L89MA
 CP076303017CP076303017HQ995081None   L10V, I13V, G16E, E35D, M36I, R41K, K45R, R57K, L63S, H69K, L89MA
 CP076300809CP076300809HQ995103None   I13V, K14R, E35D, M36I, R41K, R57K, L63S, H69K, V77I, L89MA
 CP076300810CP076300810HQ995104None  L10LFL19I, K20R, E35D, M36I, R41K, R57K, L63S, H69K, L89MA
 CP076300878CP076300878HQ995133None   I13V, G16E, K20IM, E35N, M36I, R41K, L63S, H69K, V77VI, L89MA
 CP076300895CP076300895HQ995141None   I13V, E35D, M36I, R41K, R57K, L63S, H69K, L89MA
 CP076301789CP076301789HQ995145None   L10V, I13V, G16E, K20R, E35D, M36I, R41K, K45R, R57K, L63S, H69K, L89MA
 CP076301790CP076301790HQ995146None   L10I, T12K, I13V, G16E, E35D, M36I, R41K, R57K, L63S, H69Q, L89MA
 CP076303038CP076303038HQ995223None   I13V, E35D, M36I, R41K, K45R, R57K, L63S, H69K, L89MA
 CP076303100CP076303100HQ995276None   L10V, I13V, K14R, G16A, E35D, M36I, R41K, R57K, L63S, H69K, L89MA
 CP076303104CP076303104HQ995280None  L33FI13V, M36I, R41K, R57K, I62V, L63S, H69K, L89MA
 CP076300756CP076300756HQ995332None   I13V, K14R, E35D, M36I, R41K, L63S, H69K, L89MA
 CP076300757CP076300757HQ995333None   I13V, G16E, E35D, M36I, R41K, K45R, R57K, L63S, I64M, H69K, K70R, L89MA
 CP076300785CP076300785HQ995349None   I13V, K14R, E35D, M36I, N37NK, R41K, R57K, L63S, H69K, L89MA
 CP076301906CP076301906HQ995381None   T12A, I13V, I15V, E35D, M36I, N37D, R41K, K45R, L63S, H69K, L89MA
 CP076302036CP076302036HQ995460None   I13V, K20KR, E35D, M36I, R41K, R57RK, I62V, L63S, H69K, L89MA
 CP076302925CP076302925HQ995483None   L10I, I13V, G16E, E35D, M36I, P39S, R41K, K45R, L63S, H69K, L89MA
Kasang (2011)3265732657HM572367None   T12P, I13V, K14R, G16E, E35D, M36I, R41K, W42W*, L63S, H69K, G86GE, L89IA
 1718017180HM572372None   I13V, E35D, M36I, R41K, K45R, R57K, L63S, H69K, L89MA
 2211222112HM572373None   I13V, E35D, M36I, R41K, R57K, L63S, H69K, K70R, I72T, L89MA
 1717717177HM572376None   I13V, E35D, M36I, R41K, K45R, R57K, L63S, H69K, L89MA
 60216021HM572390None   I13V, E35D, M36I, R41K, R57K, L63S, H69K, L89MA
 3266032660HM572416None   T12TA, I13V, E35D, M36I, R41K, K45KR, R57K, L63S, H69K, L89MA
Ndembi (2011)NTCPS719NTCPS719HQ702627None   L10I, I13V, K14R, I15V, E35D, M36I, R41K, R57K, L63S, H69K, L89MA
 NTCPS701NTCPS701HQ702669None   I13V, K14R, E35D, M36I, R41K, R57K, I62V, L63S, H69K, T74S, L89MA
Caron (2012)Gab051112Gab051112JN704994None   I13V, E35D, M36I, R41K, K45R, L63S, H69K, L89MA
De Gascun (2012)IRL05105IRL05105JN622278None   L10I, T12X, I13IV, G16GE, Q18QH, E35D, M36I, R57K, L63S, H69K, L89MA
Dvali (2012)R027R027GQ268437None   I13V, K14KR, G16E, E35D, M36MI, R41K, Q61N, L63S, I64M, H69K, V77I, L89M, I93LA
 R122R122GQ268511None   I13V, I15V, E35D, M36I, R41K, G51GE, L63S, G68GE, H69K, L89M, I93LA
Karlsson (2012)SE_15SE_15JQ698676None   L10I, I13V, I15V, G16E, E35D, M36I, R41K, K45R, R57K, L63S, H69K, K70R, L89MA
 SE_240SE_240JQ698834None   L10V, I13V, I15V, G16E, E35D, M36I, R41K, K45R, R57K, L63S, H69K, K70KR, L89MA
Nazziwa (2012)10448011044801JX498973None   I13V, E35D, M36I, R41K, K45R, R57K, L63S, H69K, L89MA
 30580013058001JX498994None   L10I, I13V, E35D, M36I, R41K, K43R, L63S, C67F, H69K, L89MA
Sigaloff (2012)KELKN251KELKN251JN628514None   I13V, L19P, K20I, E35D, M36I, R41K, K45R, R57K, L63S, E65D, H69K, V77I, L89MA
 KELKN252KELKN252JN628515None   I13V, L19P, K20I, E35D, M36I, R41K, K45R, R57K, L63S, E65D, H69K, L89MA
 KELKN264KELKN264JN628522None   E35D, M36I, N37E, R41K, K45R, R57K, I62V, L63S, H69K, A71T, I72TA
Ssemwanga (2012)RCC_TDR_480117RCC_TDR_480117JQ266056None   I13V, K14R, E35D, M36I, N37E, R41K, R57K, L63S, H69K, L89MA
 RCC_TDR_482400RCC_TDR_482400JQ266059None   I13V, K14R, E35D, M36I, N37E, R41K, R57K, L63S, H69K, L89MA
 RCC_TDR_482363RCC_TDR_482363JQ266065None   I13V, K14R, E35D, M36I, N37E, R41K, R57K, L63S, H69K, L89MA
 RCC_TDR_358497RCC_TDR_358497JQ266090None   I13V, E35D, M36I, R41K, K45R, R57K, L63S, H69K, L89MA
Ssemwanga (2012)3132HR3132HRJF800196None   L10V, T12V, I13V, G16E, E35D, M36I, R41K, R57K, L63S, H69K, L89MA
Yang (2012)KN-91KN-91JQ616937None   T12S, I13V, K14N, E35D, M36I, R41K, K45R, R57K, L63S, H69K, L89MA
Antoniadou (2013)GR111GR111KF671820None   L10I, I13V, K14R, G16E, E35D, M36I, R57K, L63S, H69K, L89MA
 GR075GR075KF671793None   I13V, K14N, K20R, E35D, M36I, K45R, R57K, L63S, H69K, L89MA
 GR146GR146KF671855None   T12A, I13V, G16E, E35D, M36I, K45R, R57K, L63S, I64IM, H69K, L89MA
 GR015GR015KF671759None   L10LI, I13V, K14R, G16GE, E35D, M36I, K45R, R57K, L63S, H69K, L89MA
 GR117GR117KF671826None   L10I, I13V, G16E, E35D, M36I, K45R, R57K, D60E, I62V, L63S, H69K, L89MA
 GR029GR029KF671764None  L33FI13V, E35D, M36I, R41K, K45R, R57K, L63S, E65D, H69K, K70R, L89M, I93LA
 GR115GR115KF671824None   L10V, I13V, K14R, G16E, K20R, E35D, M36I, N37D, R41K, K45R, R57K, L63S, H69K, K70R, L89MA
 GR142GR142KF671851None   L10I, I13V, K14R, G16E, E35D, M36I, R57K, L63S, H69K, L89MA
 GR013GR013KF671758None   I13V, G16E, E35D, M36I, K45R, R57K, L63S, H69K, L89MA
 GR061GR061KF671783None   L10I, I13V, G16E, E35D, M36I, K45R, R57K, L63S, H69K, L89MA
 GR144GR144KF671853None   T12A, I13V, G16E, E35D, M36I, K45R, R57K, L63S, H69K, L89MA
 GR129GR129KF671838None   I13V, K14R, E35D, M36I, R41K, K45R, L63S, H69K, L89MA
Avidor (2013)19701970KC184303None   I13V, E35D, M36I, R57K, I62V, L63S, H69K, I72V, T74S, L89MA
 16071607KC184209None   I13V, G16E, E35D, M36I, R41K, I62IV, L63S, I64IM, H69K, L89IM, I93LA
Bila (2013)MzNat011HIV-1KF927361None   I13V, K14R, L19I, E35D, M36I, R41K, K45R, R57K, L63S, H69K, L89MA
Frentz (2013)EHR-01921EHR-01921JX299577None   L10I, I13V, K14R, I15V, G16E, L19P, K20I, E35N, M36I, R41K, K45R, R57K, L63S, H69K, K70R, L89MA
 EHR-13208EHR-13208JX299753None   I13V, E35D, M36I, R41K, K43R, R57K, L63S, H69K, I72M, L89MA
 EHR-14940EHR-14940JX299787None   L10V, I13V, K14R, E35D, M36I, R41K, K45R, R57K, L63S, H69K, K70R, L89MA
 EHR-41871EHR-41871JX300248None   E35D, M36I, N37D, R41K, L63S, H69K, L89MA
Hassan (2013)RS09000860RS09000860HQ441605None   I13V, K14R, I15IV, E35D, M36I, R41K, R57K, L63S, H69K, L89MA
 RS09000873RS09000873HQ441618None   I13V, K14R, E35D, M36I, R41K, R57K, L63S, H69K, L89MA
 RS09000902RS09000902HQ441647None   I13V, E35D, M36I, R41K, R57K, I62V, L63S, I64L, H69K, L89MA
 RS09000929RS09000929HQ441671None   T12P, I13V, G16E, K20R, E35D, M36I, N37NS, R41K, Q61N, L63S, G68E, H69K, K70R, L89M, T91V, I93LA
 RS09000938RS09000938HQ441680None   I13V, E35D, M36I, R41K, K45KR, R57K, L63S, H69K, L89MA
 RS09000942RS09000942HQ441684None   I13V, K14R, K20KR, E35D, M36I, R41K, R57K, Q61HN, L63S, H69K, L89MA
 RS09000965RS09000965HQ441703None  L33II13V, E35D, M36I, R41K, K45R, R57K, L63S, G68DE, H69R, L89MA
 RS09000977RS09000977HQ441713None   L10V, I13V, G16E, E35D, M36I, N37D, R41K, R57K, D60E, L63S, H69K, K70R, V77VI, L89MA
 RS11000256RS11000256JQ698355None  V11IL10I, I13V, E35D, M36I, R41K, R57K, I62V, L63S, I64L, H69K, L89MA
 RS11000356RS11000356JQ698425None   I13V, L19I, E35D, M36I, R41K, R57K, L63S, H69K, L89MA
Inzaule (2013)119119JQ914080None   I13V, M36I, R41K, L63S, H69K, L89MA
  119JQ914081None   I13V, M36I, R41K, L63S, H69K, L89MA
 7373JQ914097None   I13V, G16E, L19I, E35D, M36I, R41K, K43KR, L63S, H69K, K70R, L89M, T91V, I93LA
Kiptoo (2013)KTL112KTL112KC517025None   I13V, K14KR, G27GR, E35D, M36I, N37NS, R41K, R57K, L63S, H69K, V77I, L89MA
 SNH098SNH098KC516959None   E35D, M36I, R41K, R57K, I62V, L63S, H69K, L89MA
 KAP068KAP068KC516915None   L10LV, T12A, I13V, G16AE, K20R, E35D, M36I, R41K, R57K, L63S, H69K, L89MA
Pircher (2013)B1116B1116JX110303None   L5LF, L10V, T12I, I13V, I15V, G16GE, E21EK, M36I, R41K, L63S, H69K, L89MA
Rusine (2013)408H408HKC841668None   T12A, I13V, K20I, M36I, R41K, K45R, Q61E, L63S, H69K, L89MA
 409H409HKC841669None   L10I, I13V, K14R, G16E, E35D, M36I, R41K, K45R, R57K, L63S, H69N, L89MA
Sigaloff (2013)JCR109_0JCR109_0JX182002None   I13V, E35E_D, M36I, R41K, R57K, L63S, I64M, H69K, L89MA
Van Zyl (2013)7211235KC422985None   T12P, I13V, I15V, G16E, E35D, M36I, R41K, L63S, H69K, K70R, L89M, T91V, I93LA
Chung (2014)KVO_35_KA476eKVO_35_KA476eKF544263None   E35D, M36I, N37E, R41K, R57K, I62V, L63S, H69K, K70R, L89MA
Lee (2014)MBA1281MBA1281KJ906972None   L10V, I13V, K14R, G16E, K20R, E35D, M36I, R41K, R57K, L63S, H69K, K70R, L89MA
 MBA1104MBA1104KJ906804None   G16E, R57K, L63S, H69K, V77I, L89LFA
 MBA1052MBA1052KJ906753None   L10IV, T12V, I13V, G16E, E35D, M36I, R41K, R57K, L63S, H69K, K70R, L89MA
 MBA1078MBA1078KJ906778None   K14KR, I15V, G16E, K20M, M36V, P39Q, R41K, L63S, I64IV, H69K, I72VA
Meixenberger (2014)09-0273509-02735KJ771066None   T12TA, I13V, E35D, M36I, R41K, K45KR, R57K, L63S, I64M, H69K, L89M, I93LA
 07-0008507-00085KJ770364None   I13V, E35D, M36I, R41K, K45R, R57K, L63S, I64M, H69K, L89M, I93IL, F99FLA
 06-0000906-00009KJ770166None   I13V, E35D, M36I, R41K, K45R, R57K, L63S, I64M, H69K, L89MA
 08-0122808-01228KJ770732None   I13V, E35D, M36I, R41K, K45R, R57K, L63S, I64M, H69K, L89M, I93LA