<!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

Protease Inhibitors

Subtype A
Gene PR
Mutation L63P
Rx PI-naive
IncludeMixtures No
References 120
Patients 462
Isolates 474
 
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Sequences matching input query are shown below. Original reference, patient identifier, isolate name, partial treatment histories and accession number are indicated. Complete treatment histories, when available, can be accessed by clicking the isolate name. Sequences may additionally be downloaded in the fasta format, or viewed as individual or composite alignments using the options above. If the user wishes to view individual alignments of isolates for which there are multiple clones, the user can choose to view either an alignment of consensus sequences derived from the clones or an alignment of each clone as well as a consensus sequence.

Author (yr) Patient Isolate Acc# PIs WksPIMajorDRMs PIMinorDRMs OtherMutSubtype
Ellenberger (1999)El-IC3639IC3639AF000488None   I13V, L19P, K20M, E21K, M36I, R41K, L63P, H69K, L89MA
 El-IC3532IC3532AF000481None   I13V, K14R, L19P, K20I, A22P, M36I, N37D, R41K, L63P, H69K, K70R, L89MA
Nkengasong (2000)JN_IC28JN_IC28AF216987None   I13V, L19I, K20I, M36L, L38F, R41K, L63P, H69K, L89MA
Vergne (2000)LV15HALDLV15HALDAJ286980None   L10I, V11A, I13V, K14R, E35D, M36I, N37D, R41K, K45R, R57K, L63P, H69K, L89MA
Carr (2001)CM53122CM53122AY037284None   I13V, E35N, M36I, N37D, R41K, L63P, H69K, V77I, L89MA
Eshleman (2001)SE699SE699AF388155None   T12R, I13V, L19I, E35D, M36I, R41K, R57K, L63P, H69K, L89MA
 SE522SE522AF388144None   I13V, E35D, M36I, R41K, R57K, L63P, H69K, K70KR, L89MA
 SE444SE444AF388142None   I13V, K14KR, E35D, M36I, R41K, K45R, R57K, L63P, H69K, L89MA
 SE652SE652AF388108None   I13V, E35D, M36I, R41K, K45R, R57K, L63P, H69K, K70KR, L89MA
 SE646SE646AF388106None   I13V, E35D, M36I, R41K, R57K, L63P, H69K, L89MA
 SE180SE180AF388071None   I13V, K14R, E35D, M36I, R41K, R57K, L63P, H69K, L89MA
Yahi (2001)NY_M23M23AY010386None   L10I, I15V, E35D, M36I, N37ND, R41K, L63P, I64M, H69K, L89M, I93LA
 NY_M49M49AY010413None   L10I, I13V, E35D, M36I, R41K, L63P, H69Q, V77VI, L89MA
Dowling (2002)KNH1097KNH1097AF457064None   I13V, E35D, M36I, P39A, R41K, K45R, R57K, L63P, H69K, L89MA
Eshleman (2002)113913u113913uAF410204None   I13V, K14R, E35D, M36I, R41K, R57K, L63P, H69K, L89MA
 138430v138430vAF410231None   E35D, M36I, R41K, R57RK, L63P, H69K, K70R, L89MA
Pandrea (2002)IP_97CIRMF2497CIRMF24AY140644None   I13V, E35D, M36I, R41K, L63P, H69KA
Snoeck (2002)BE11BE11AF338999None   L10I, I13V, E35D, M36I, R41K, K45R, R57K, L63P, H69K, L89MA
Yang (2002)DH006DH006AB078706None   I13V, L63P, A71V, I93LA
Hanna (2003)HG014HG014AY049679None   I13V, E35D, M36I, R41K, K45R, R57K, L63P, H69K, L89MA
Maljkovic (2003)MI_Pat7499SE16763AY165206None   I13V, E35D, M36I, R41K, K45R, R57K, L63P, H69K, L89MA
Njouom (2003)37pol37polAY204313None   I3G, I13V, E35D, M36I, R41K, R57K, L63P, H69K, V77I, L89MA
Vergne (2003)VL99SN61HPD99SN61AJ583720None   I13V, K14R, E35D, M36I, N37D, R41K, K45R, R57K, L63P, H69K, L89MA
 VL98SN5hald98SN5AJ583737None   I13V, K14R, L33V, E35D, M36I, R41K, R57K, L63P, H69K, L89MA
Arroyo (2004)01TZA17301TZA173AY253305None   I13V, K14R, E35D, M36I, R41K, R57K, L63P, H69K, K70R, L89MA
Eshleman (2004)SE816SE816_7dAY428724None   L10V, I13V, K20R, M36I, R41K, L63PA
 SE545SE545_7dAY428691None   I13V, L33V, R41K, K45R, K55KR, L63P, H69K, L89MA
 SE879SE879_7dAY428730None   I13V, E35D, M36I, R41K, R57K, L63P, H69K, L89MA
 SE652SE652_7dAY428706None   I13V, E35D, M36I, R41K, K45R, R57K, L63P, H69K, K70KR, L89MA
 SE180SE180_7dAY428682None   I13V, K14R, E35D, M36I, R41K, R57K, L63P, H69K, L89MA
Eshleman (2004)ESH_Pat1ESH460AY435271None   I13V, K14R, E35D, M36I, R41K, R57K, L63P, H69K, L89MA
 ESH_Pat5ESH821AY435368None   I13V, E35D, M36I, P39PS, R41K, K45R, R57K, I62V, L63P, H69K, L89MA
 ESH_Pat13ESH684AY435335None  V11VII13V, E35D, M36I, R41K, R57K, L63P, H69K, L89MA
 ESH_Pat22ESH45AY435228None   I13V, K14R, E35D, M36L, R41K, R57K, L63P, H69K, L89MA
Eshleman (2004) SE45_7dAY428672None   I13V, K14R, E35D, M36L, R41K, R57K, L63P, H69K, L89MA
Eshleman (2004)ESH_Pat45ESH51AY435234None   I13V, K14KR, E35D, M36I, R41K, R57K, L63P, H69K, L89MA
Eshleman (2004) SE51_7dAY428675None   I13V, K14KR, E35D, M36I, R41K, R57K, L63P, H69K, L89MA
Eshleman (2004)ESH_Pat57ESH771AY435361None   I13IV, K14KR, E35D, M36I, R41K, R57K, L63P, H69K, L89MA
 ESH_Pat94ESH573AY435315None   I13V, K14R, E35D, M36I, R41K, R57K, L63P, H69K, L89MA
 ESH_Pat147ESH662AY435329None   I13V, E35D, M36IV, R41K, K45R, L63P, H69K, L89IMA
 ESH_Pat163ESH811AY435374None   I13V, K14R, E35D, M36I, R41K, R57K, L63P, H69K, K70T, L89MA
 ESH_Pat169ESH672AY435337None   I13V, E35D, M36I, R41K, R57K, L63P, H69K, K70R, L89MA
Eshleman (2004)ABB27ABB27AY444194None   I13V, K20R, E35D, M36I, N37D, R41K, K45R, L63P, I64M, H69K, I72V, V77I, L89MA
 264_643264_643AY444186None   I13V, E35D, M36I, R41K, R57K, D60E, L63P, H69K, L89MA
Kijak (2004)4008HAN01CM.4008AY371168None   E35D, M36I, R41K, D60E, L63P, K70TA
Konings (2004)KF_Pat2900CM340AY359711None   I13V, E35N, M36I, N37D, R41K, L63P, I64M, H69K, V77I, L89MA
 KF_Pat3000CM3073AY359712None   I13V, E35N, M36I, N37D, R41K, K43R, L63P, H69K, L89MA
 KF_Pat3700CM1374AY359719None   I13V, E35D, M36I, R41K, I62V, L63P, H69K, L89MA
Roudinskii (2004)97KZ82797KZ827AY618612None   I13V, E35D, M36I, R41K, L63P, H69K, L89MA
Servais (2004)SJ_Pat34SJKLM027AJ412953None   E35D, M36I, R41K, K45R, R57K, L63P, H69K, K70R, L89MA
 SJ_Pat35SJKLM043AJ412963None   L19V, E35D, M36I, R41K, R57K, L63P, C67Y, H69K, L89MA
 SJ_Pat42SJKLM048AJ412968None   I13V, K14KR, E35D, M36I, R41K, R57K, L63P, H69K, V77I, L89MA
Snoeck (2004)BE22BE22AY900731None   I13V, E35D, M36I, R41K, K45R, R57K, I62IV, L63P, H69K, L89MA
Arroyo (2005)CO6968CO6968AY734555None   T12S, I15V, L19I, M36I, R41K, R57K, I62V, L63P, H69K, I72M, L89MA
Carr (2005)02UZ76202UZ762AY845842None   E35D, M36I, R41K, L63P, H69K, V77I, L89M, I93LA
 02UZ81602UZ816AY845717None   I13V, K14R, E35D, M36I, R41K, L63P, H69K, V77I, L89M, I93LA
Ciccozzi (2005)MC_AY611652A57AY611652None   I13V, E35D, M36I, R41K, K45R, R57K, L63P, H69K, L89MA
 MC_AY611653A58AY611653None   I13V, E35D, M36I, R41K, K45R, R57K, L63P, H69K, L89MA
 MC_AY611654A41AY611654None   T12S, I13V, E35D, M36I, P39S, R41K, K45R, R57K, L63P, H69K, L89MA
 MC_AY611656A46AY611656None   I13V, E35D, M36I, R41K, K45R, R57K, L63P, H69K, L89MA
 MC_AY611657A51AY611657None   I13V, E35D, M36I, R41K, K45R, R57K, L63P, H69K, L89MA
 MC_AY611659A56AY611659None   I13V, E35D, M36I, R41K, K45R, R57K, L63P, H69K, L89MA
 MC_AY611660A63AY611660None   I13V, E35D, M36I, R41K, K45R, R57K, L63P, H69K, L89MA
 MC_AY611662A69AY611662None   I13V, I15V, E35D, M36I, R41K, K45R, R57K, L63P, H69K, L89MA
 MC_AY611663A71AY611663None   L10V, I13V, E35D, M36I, R41K, K45R, R57K, L63P, H69K, L89MA
 MC_AY611689A52AY611689None   I13V, E35D, M36I, R41K, K45R, R57K, L63P, H69K, L89MA
 MC_AY611690A54AY611690None   I13V, E35D, M36I, R41K, K45R, R57K, L63P, H69K, L89MA
 MC_AY611691A42AY611691None   I13V, E35D, M36I, R41K, K45R, R57K, L63P, H69K, L89MA
 MC_AY611692A43AY611692None   I13V, E35D, M36I, R41K, K45R, R57K, L63P, H69K, L89MA
 MC_AY611693A62AY611693None   I13V, R41K, L63P, L89MA
 MC_AY611698A21AY611698None   T12A, I13V, E35D, M36I, R41K, K45R, R57K, L63P, H69K, L89MA
 MC_AY611700A31AY611700None   I13V, E35D, M36I, R41K, K45R, R57K, L63P, H69K, L89MA
 MC_AY611702A19AY611702None   T12A, I13V, E35D, M36I, R41K, K45R, R57K, L63P, H69K, L89MA
 MC_AY611703A25AY611703None   T12P, I13V, E35D, M36I, R41K, K45R, R57K, L63P, H69K, L89MA
 MC_AY611704A28AY611704None   I13V, K14R, E35D, M36I, R41K, K45R, R57K, L63P, H69K, L89MA
 MC_AY611705A29AY611705None   I13V, E35D, M36I, R41K, K45R, R57K, L63P, H69K, L89MA
 MC_AY611706A70AY611706None   I13V, E35D, M36I, R41K, K45R, R57K, L63P, H69K, L89MA
 MC_AY611709A33AY611709None   I13V, E35D, M36I, R41K, K45R, R57K, L63P, H69K, L89MA
 MC_AY611710A22AY611710None   I13V, E35D, M36I, R41K, K45R, R57K, L63P, H69K, L89MA
 MC_AY611713A39AY611713None   I13V, E35D, M36I, R41K, K45R, R57K, L63P, H69K, L89MA
Grossman (2005)1712517125PR95 None   I13V, E35D, M36I, R41K, L63P, H69K, L89M, I93LA
 2479924799PR377 None  L10FI13V, K14R, I15IT, E35D, M36I, R41K, L63P, H69K, L89M, I93LA
 2721027210PR441 None   I13V, K14R, E35D, M36I, R41K, L63P, H69K, L89M, I93LA
 2737027370PR457 None   I13V, K14R, E35D, M36I, R41K, L63P, H69K, L89M, I93LA
Holguin (2005)1068-0000_1068-00AY248326None   I13V, E35N, M36I, N37D, P39S, R41K, L63P, H69K, L89MA
K'Aluoch (2005)OK_TC007803TC007803DQ079853None   I13V, K20KQ, L33LS, E35D, M36I, R57K, D60E, I62V, L63P, H69K, K70R, L89MA
Non-B Workgroup (2005)UK1353UK1353AY900798None   I13V, K14R, I15V, P39Q, R41K, L63P, L89MA
 IL353IL353AY900817None   I13V, E35D, M36I, R57K, D60AE, I62V, L63P, H69K, T74S, L89MA
 UK4956UK4956AY901211None   I13V, K14R, G17E, E35D, M36I, R41K, K45R, R57K, I62V, L63P, H69K, K70R, T74S, L89MA
Saad (2005)SM_02YE51202YE512AY790008None   I13V, K20R, E35D, M36I, N37K, R41I, G49R, R57K, L63P, H69K, K70R, I72V, L89MA
Tee (2005)MYIDUA604MYIDUA6DQ018346None   E34EK, E35D, M36I, K55KR, L63P, H69K, L89MA
Weber (2005)M92872M92872AY677420None   I13V, K20R, E35D, M36I, R41K, K43R, R57K, L63P, H69K, L89MA
 F43642F43642AY714437None   I13V, E35D, M36I, R41K, L63P, H69K, L89MA
 F99921F99921AY714451None   L10I, I13V, K20KR, E35N, M36I, N37D, R41K, L63P, H69K, K70R, L89MA
Jayaraman (2006)5-00-0091a5-00-0091a None   I13V, L19Q, E35D, M36I, R41K, R57K, L63P, H69K, K70R, L89MA
Koizumi (2006)YK_04CM007YK_04CM007DQ461826None   I13V, E35N, M36I, N37D, R41K, L63P, H69K, L89MA
Lindstrom (2006)SIIDC0204SIIDC0204 None   T12P, I13V, K14R, E35D, M36I, R41K, K45R, R57K, L63P, H69K, L89MA
Marechal (2006)JF_034JF_034DQ443649None   E35N, M36I, N37D, R41K, L63P, H69K, L89MA
 JF_049JF_049DQ443658None   T12P, I13V, K20R, E35D, M36I, R41K, K45R, L63P, C67Y, H69K, L89MA
 JF_063JF_063DQ443668None   L10I, I13V, I15IV, E35D, M36I, N37D, R57K, L63P, H69EK, L89M, I93MA
Niama (2006)ARV64ARV64FM164892None   L10V, T12V, I13V, M36L, N37D, I62V, L63P, H69K, L89MA
Razafindratsimandresy (2006)RR_MAD-TI058MAD-TI058DQ345017None  L33FI13V, K14R, K20I, E35D, M36I, R41K, K45R, R57K, L63P, C67Y, H69K, K70R, L89MA
Saad (2006)MDS_01UADN22001UADN220DQ055192None   I13V, K14R, G16E, E35D, M36I, R41K, L63P, H69K, L89M, I93LA
 MDS_02UACR00402UACR004DQ055267None   E35D, M36I, R41K, L63P, H69K, L89M, I93LA
 MDS_02UACR00602UACR006DQ055269None   I13V, K14R, E35D, M36I, R41K, L63P, H69K, L89M, I93LA
 MDS_02UAKV12102UAKV121DQ055291None   K14R, E35D, M36I, N37D, R41K, L63P, H69K, L89M, I93LA
 MDS_02UAKV13102UAKV131DQ055295None   I13V, K14R, G16A, E35D, M36I, R41K, L63P, H69K, L89M, I93LA
Vessiere (2006)AV_M4160NAV_M4160NDQ297194None   I13V, E35D, M36I, R41K, K45R, L63P, H69K, L89MA
 AV_M9119NAV_M9119NDQ297213None   I13A, K14R, K20I, E35D, M36I, R41K, L63P, H69K, L89M, N98NSA
 AV_M9312NAV_M9312NDQ297219None   I13V, K14R, L19Q, E35D, M36I, R41K, R57K, D60E, L63P, H69K, L89MA
 AV_M9443NAV_M9443NDQ297221None   I13V, K14KR, K20KI, E35DN, M36I, N37D, R41K, I62V, L63P, H69K, L89MA
Baker (2007)9167NS03-9167NSAY803463None   I13V, E35D, M36I, R41K, R57K, D60E, L63P, H69K, L89MA
 9412NS03-9412NSAY803472None   T12A, I13V, E35D, M36I, R41K, K45R, R57K, L63P, H69K, L89MA
 9538NG03-9538NGAY803473None   I13V, K14R, E35D, M36I, R41K, R57K, L63P, H69K, I72V, L89MA
 P0054P0054-020305EF186137None   L10I, I13V, K14R, E35D, M36I, R41K, R57K, L63P, H69Q, L89MA
 P0185P0185-130605EF186145None   L10M, I13V, E35D, M36I, R41K, R57K, L63P, H69Q, L89MA
 A1053MBA1053-201005EF186218None   I13V, K14R, L19I, E35D, M36I, R41K, I62V, L63P, I64M, H69K, L89MA
 AR007MBAR007-120405EF186223None   I13V, K14R, I15V, K20I, E35ED, M36I, R41K, L63P, H69K, L89MA
 AR017MBAR017-030505EF186226None   L10I, I13V, K14R, E35D, M36I, R41K, R57K, L63P, H69K, L89MA
Church (2007)045-109688N045EF612002None   I13V, K14R, E35D, M36L, R41K, R57K, L63P, H69K, L89MA
 051-110961Y051EF612004None   I13V, K14KR, E35D, M36I, R41K, R57K, L63P, H69K, L89MA
 180-118080i180EF612014None   I13V, K14R, E35D, M36I, R41K, R57K, L63P, H69K, L89MA
 522-128205c522EF612056None   I13V, E35D, M36I, R41K, R57K, L63P, I64L, H69K, K70KR, L89MA
 646-133038m646EF612092None   I13V, E35D, M36I, R41K, R57K, L63P, H69K, L89MA
 652-133291l652EF612096None   I13V, E35D, M36I, R41K, K45R, R57K, L63P, H69K, L89MA
 662-135975N662EF612099None   I13V, E35D, M36IV, R41K, K45R, L63P, H69K, L89IMA
 672-135604H672EF612101None   I13V, E35D, M36I, R41K, R57K, L63P, H69K, K70R, L89MA
 684-134386Y684EF612107None   I13V, E35D, M36I, R41K, R57K, L63P, H69K, L89MA
 699-136283t699EF612113None   T12R, I13V, L19I, E35D, M36I, R41K, R57K, L63P, H69K, L89MA
 771-140407R771EF612140None   I13V, K14R, E35D, M36I, R41K, R57K, L63P, H69K, L89MA
 811-145165P811EF612156None   I13V, K14R, E35D, M36I, R41K, R57K, L63P, H69K, K70T, L89MA
 821-144894D821EF612160None   I13V, E35D, M36IL, R41K, K45R, R57K, I62V, L63P, H69K, L89MA
 871-146977m871EF612176None   L10V, E35D, M36I, R41K, L63P, H69K, K70R, L89MA
Eyzaguirre (2007)KZKAR30044902K300449EF576738None   I13V, E35D, M36I, R41K, L63P, H69K, K70R, L89M, I93LA
Galluzzo (2007)24320RW_24320JQ220019None   I13V, K14R, E35D, M36I, R41K, K43KR, R57K, L63P, H69K, L89MA
 22080RW_22080JQ220035None   I13V, E35D, M36I, R41K, K45KR, L63P, H69K, V77I, L89MA
 24130RW_24130JQ220055None   I13V, K14R, I15V, E35D, M36I, N37ND, R41K, R57K, L63P, H69K, L89IMA
 M21200UG_M21200JQ220135None   I13V, M36I, R41RK, K45KR, L63P, H69K, L89IMA
Gatanaga (2007)F04-5103-156-1F04-5103-156-1AB640535None   I13V, E35D, M36I, R41K, R57K, L63P, H69K, L89MA
Han (2007)LN6904CNLN69EF122560None   I13V, K14R, E35D, M36I, N37D, R41K, L63P, H69K, I72T, V77I, L89M, I93LA
McNulty (2007)Cam20Cam20PLDQ869197None   E35N, M36I, N37D, R41K, L63P, H69K, L89MA
  Cam20DBSDQ869196None   E35N, M36I, N37D, R41K, L63P, H69X, L89MA
Razafindratsimandresy (2007)88HIV-SEYEF143500None   I13V, Q18QE, L19LI, E35D, M36I, R41K, R57K, L63P, H69K, V77I, L89MA
 1818HIV-SEYEF143510None   I13V, K14R, E35D, M36I, N37D, R41K, R57K, L63P, H69K, L89MA
 4040HIV-SEYEF143531None   I13V, K14R, E35D, M36I, N37D, R57K, L63P, H69K, L89MA
Vicenti (2007)397154749REF376626None   L10V, I13V, K14R, E35D, M36I, R41K, K45R, R57K, L63P, H69K, L89MA
Vidal (2007)U292902BU.U2929AM260253None   I13V, K14R, G17E, K20I, E35N, M36I, R41K, L63P, H69K, K70R, V77VI, L89MA
 U161702BU.U1617AM260315None   L10I, I13V, E35D, M36I, R41K, K45R, R57K, L63P, H69Q, V77I, L89MA
Chang (2008)TW3632aTW3632a None   L10LI, I13V, K14KR, K20KR, E35D, M36I, R41K, K43KR, K45KR, R57K, L63P, H69K, K70R, L89MA
Church (2008)363290D363290DEU380731None   L10I, I13V, K14R, G16E, E35D, M36I, P39S, R41K, K45R, R57K, I62V, L63P, H69K, K70R, L89MA
 367927-J367927-JEU380735None   I13V, I15V, G17E, E35D, M36I, R41K, K45R, I62V, L63P, I64V, H69CA
 409924L409924LEU380755None   I13V, K20R, E35D, M36I, R41K, K45R, R57K, L63P, H69K, K70R, L89MA
 460471T460471TEU380764None   K20T, E35D, M36I, R41K, L63P, H69K, L89MA
Derache (2008)BKO-1023BKO-1023EU330715None   I13V, G17E, K20I, M36I, P39S, L63P, H69K, L89MA
 SGO-49SGO-49EU330793None   T12K, I13A, I15V, K20I, E35D, M36I, N37D, R41K, L63P, H69K, K70R, L89MA
Gody (2008)Pt004Pt004 None   I13V, E35D, M36I, R41K, K45R, I62V, L63P, G68E, H69R, L89MA
Ibe (2008)156156AB356204None   I13V, E35D, M36I, R41K, K45R, R57K, L63P, H69K, L89MA
 552552AB356480None   I13V, E35D, M36I, R41K, R57K, L63P, H69K, L89MA
Land (2008)ML1974ML1974EU110090None   I13V, R41K, L63P, V77IA
Ndembi (2008)CMYD-904CMYD-9DQ990384None   I13V, E35D, M36I, R41K, R57K, D60E, L63P, H69K, K70R, V77I, L89MA
 CMYD-4204CMYD-42DQ990411None   I13V, K14R, K20I, E35D, M36I, R41K, L63P, I64L, H69K, L89MA
Ndembi (2008)IAEAM003IAEAM003EU306745None   I13V, K14KR, M36I, R41K, K45R, R57K, L63P, H69K, L89MA
 IAEAM004IAEAM004EU306746None   I13V, L19F, E35D, M36I, R41K, R57K, L63P, H69K, L89MA
 IAEAM007IAEAM007EU306747None   I13V, K14R, E35D, M36I, R41K, L63P, H69K, L89MA
 IAEM031IAEM031EU306763None   I13V, K14R, K20I, M36I, R41K, L63P, H69K, L89MA
 IAEM033IAEM033EU306764None   I13V, E35D, M36I, R41K, R57K, L63P, H69K, L89MA
 IAEM039IAEM039EU306769None   I13V, E35D, M36I, R41K, R57K, L63P, H69K, L89MA
 IAEM050IAEM050EU306777None   I13V, K14R, E35D, M36I, R41K, R57K, L63P, H69K, L89MA
 IAEM054IAEM054EU306778None   I13V, K20R, E35D, M36I, R41K, R57K, L63P, H69K, L89MA
 IAEM056IAEM056EU306779None   I13V, E35D, M36I, R41K, R57K, L63P, H69K, L89MA
Nyombi (2008)TBK011TBK011EU251722None   I13V, K14R, I15V, K20R, E35D, M36I, N37D, R41K, K43R, R57K, L63P, H69K, L89MA
 TBK018TBK018EU251725None   I13V, K20I, E35D, M36I, R41K, R57K, L63P, H69K, I72L, V82I, L89MA
 TBK023TBK023EU251729None   I13V, G16A, E35D, M36I, R41K, K45R, R57K, L63P, H69K, L89MA
 TBK024TBK024EU251730None   I13V, K14R, E35D, M36I, R41K, R57K, L63P, H69K, L89MA
 TBK045TBK045EU251741None   K14R, E35D, M36I, N37E, K45R, R57K, L63P, H69K, L89MA
 TBK056TBK056EU251750None   I13V, K14R, E35D, M36I, R41K, R57K, L63P, H69K, L89MA
 TBK099TBK099EU251780None   I13V, L19I, E35D, M36I, N37D, R41K, R57K, D60E, I62V, L63P, H69K, L89MA
 TMS001TMS001EU251782None   I13V, K14R, E35D, M36I, R41K, K45R, R57K, L63P, H69K, L89M, N98DA
 TMS007TMS007EU251788None   I13V, E35D, M36I, R41K, R57K, L63P, H69K, L89MA
 TMS119TMS119EU251819None   I13V, E35D, M36I, R41K, K45R, R57K, L63P, H69K, L89MA
 TMS129TMS129EU251827None   K20R, E35D, M36I, R41K, K45R, R57K, L63P, H69Q, V77I, L89M, I93LA
 TMS314TMS314EU251862None   T4TA, I13V, K20R, E35D, M36I, P39PQ, R41K, K45R, R57K, L63P, H69K, L89MA
 TMS341TMS341EU251876None   I13V, M36I, R41K, R57K, L63P, H69K, L89MA
Palacios (2008)1287212872 None   I13V, K20R, E35D, M36I, N37D, R41K, L63P, H69IK, L89MA
 4102341023 None   I13V, I15V, E35D, M36I, R41K, R57RK, D60E, L63P, H69K, L89LMA
Somi (2008)BG-05-746BG-05-746JQ616952None   I13V, K14KR, E35D, M36I, R41K, K45R, R57K, L63P, H69K, V75VI, L89MA
 KW-05-266KW-05-266JQ616961None   I13V, K14R, L19I, E35D, M36I, R41K, R57K, L63P, H69K, K70R, L89MA
 OY-05-271OY-05-271JQ616976None   I13V, K14R, E35D, M36I, N37D, R41K, R57K, L63P, H69K, K70R, L89MA
Aghokeng (2009)CYR028CYR028GU191583None  L33II13V, Q18L, K20Q, E34G, E35D, M36I, R41K, R57K, D60E, L63P, H69K, L89MA
Ayouba (2009)0.2400.240-HPRGQ351816None   I13V, Q18E, L19I, E35D, M36I, I62V, L63P, H69K, L89MA
Bartolo (2009)CSE12001AOCSE120EU068202None   I13V, K14R, I15V, K20I, E35A, M36I, R41K, L63P, H69K, L89MA
 HSL3801AOHSL38EU068261None   L10V, I13V, I15V, E35D, M36I, N37D, R41K, R57K, D60E, Q61E, L63P, H69K, L89MA
 SNS5301AOSNS53EU068307None   I13V, L19I, E35D, M36I, R41K, K45R, R57K, I62V, L63P, C67Y, H69K, L89MA
Eshleman (2009)D10510W307-156925FJ389065None   L10LI, I13V, E35D, M36I, R41K, R57K, L63P, H69K, L89MA
 K35135R908-101587FJ389132None   I13V, K14R, K20I, E35D, M36I, R41K, L63P, H69K, L89MA
 E06550W208-102868FJ389147None   I13V, E35D, M36I, N37D, R57K, L63P, H69K, L89MA
Kousiappa (2009)CY153CY153EU673397None   I13V, K14E, I15V, K20R, E35D, M36I, K45R, R57K, L63P, H69K, L89M, C95CWA
Steegen (2009)BV106BV106-1EU872121None   I13V, E35D, M36I, R41K, K43R, R57K, L63P, H69K, K70R, L89MA
 BV209BV209-1EU872129None   I13V, E35D, M36I, R41K, R57K, L63P, H69K, L89MA
Thomson (2009)915_1035RU_915_1035FJ009731None   L10LI, K14R, E35D, M36I, R41K, L63P, H69K, L89M, I93LA
 915_1067RU_915_1067FJ009761None   I13V, I15V, E35D, M36I, R41K, L63P, H69K, I72V, V77I, L89M, I93LA
 915_1070RU_915_1070FJ009764None   I13V, K14R, I15IV, M36I, R41K, L63P, H69K, L89MA
 SP_B_058RU_SP_B_058FJ009813None   I13IV, K14R, E35ED, M36I, R41K, L63P, H69K, L89M, I93LA
Vercauteren (2009)pt2078839276430GQ398946None   I13V, E35D, M36I, R57K, I62V, L63P, C67CY, H69K, L89MA
 pt19441594662750GQ399080None   I13V, K14KQ, K20KR, E35D, M36I, R41K, L63P, H69K, L89M, I93LA
 pt19271724347298GQ399097None   L10I, I13V, K14R, E35D, M36I, R41K, R57K, L63P, H69K, K70R, L89M, I93LA
 pt19191815734192GQ399105None   L10I, I13V, K14R, I15V, E35D, M36I, R41K, K45R, R57K, L63P, H69K, L89MA
 pt18582114503234GQ399166None   I13V, K14R, E35D, M36I, R41K, K45R, R57K, L63P, H69K, L89MA
 pt18552128381186GQ399169None   I13V, E35D, M36I, N37NT, R41K, K45R, R57K, L63P, C67CY, H69K, V77I, L89MA
 pt16543415131536GQ399370None   I13V, E35D, M36I, R57K, I62V, L63P, H69K, L89MA
 pt15014262857598GQ399523None   I13V, I15IM, E35D, M36I, R57K, L63P, H69K, L89MA
 pt14324663774098GQ399592None   I13V, K14R, E35D, M36I, R41K, K45R, R57K, L63P, H69K, L89MA
 pt13984877237992GQ399626None   T12P, I13V, K14R, K20R, E35D, M36I, R41K, K45R, R57K, L63P, C67Y, H69K, L89MA
 pt12985426230494GQ399726None   I13IV, E35D, M36I, R57K, I62V, L63P, H69K, L89MA
 pt11556251462986GQ399869None   T12A, I13V, K14R, E35D, M36I, R41K, K45R, R57K, L63P, H69K, L89MA
 pt10956629065893GQ399929None   I13IV, E35N, M36I, N37D, R41RK, R57K, Q61QE, L63P, H69K, L89MA
 pt9817370878818GQ400043None   T12P, I13V, K14R, K20R, E35D, M36I, R41K, K45R, R57K, L63P, C67Y, H69K, L89MA
 pt9577499630794GQ400067None   L10V, I13V, E35D, M36I, R41K, R57K, L63P, H69K, L89MA
 pt8647odC6dxTFEGQ400160None   L10V, I13V, E35D, M36L, R41K, L63P, H69K, I72M, L89MA
 pt7988388132399GQ400226None   T12A, I13V, K14R, E35D, M36I, R41K, K45R, R57K, L63P, H69K, L89MA
 pt7038877010072GQ400321None   I13V, K14R, E35D, M36I, R41K, K45R, R57K, L63P, H69K, L89MA
 pt5979414101177GQ400427None   I13V, K14KR, E35D, M36I, R41K, R57K, L63P, H69K, L89MA
 pt5419675259769GQ400483None   Q7K, I13V, K14R, E35D, M36I, R41K, R57K, L63P, H69K, L89MA
 pt4889GTa28iwkJGQ400536None   K20R, E35D, M36I, R41K, K45R, R57K, L63P, H69K, L89MA
 pt73w0gqcP8LBGGQ400951None   L10LI, E35D, M36I, R41K, R57K, L63P, H69K, L89MA
Balode (2010)S2041S2041GU945092None   I13V, K14R, E35D, M36I, R41K, L63P, H69K, V77I, L89M, I93LA
 S2099S2099GU945120None   I13V, K14R, E35D, M36I, R41K, L63P, H69K, V77I, L89M, I93LA
 S2133S2133GU945140None   I13V, K14R, I15V, E35D, M36I, R41K, L63P, I64M, H69K, V77I, L89M, I93LA
 S2146S2146GU945146None   I13V, E35D, M36I, R41K, L63P, H69K, V77I, L89M, I93LA
 S2324S2324GU945180None   I13V, K14R, E35D, M36I, R41K, L63P, H69K, A71AT, V77I, L89M, I93LA
 S2331S2331GU945185None   I13IV, K14R, E35D, M36I, N37D, R41K, L63P, H69K, L89M, I93LA
 S2419S2419GU945190None   I15K, G16W, G17R, E21K, E35D, M36I, R41K, L63P, H69K, V77I, L89M, I93LA
Brennan (2010)ARC-A216ARC-A216GU565661None   I13V, E35D, M36I, P39Q, R41K, K45R, R57RK, L63P, H69K, L89MA
Diop-Ndiaye (2010)61HPD61HPDFN599722None   I13V, K14R, E35D, M36I, N37D, R41K, K45R, R57K, L63P, H69K, L89MA
El-Khatib (2010)Pat12011ZA_SAVE2391JF960570None   I13V, G16E, K20R, M36I, R41K, D60E, L63P, I64V, H69K, I93LA
Mosha (2010)S8PolS8PolJQ071456None   I13V, E35D, M36I, R41K, K45R, R57K, L63P, H69K, L89MA
 S28PolS28PolJQ071473None   L10I, I13V, E35D, M36I, R57K, L63P, H69Q, L89MA
 S36PolS36PolJQ071477None   L5I, R8G, E35ED, M36I, R41K, K45R, R57K, L63P, H69K, K70R, I72M, L89MA
 S77PolS77PolJQ071494None   G17R, E35D, M36I, R41K, R57RK, L63P, H69K, L89MA
Ndembi (2010)14006D_P114006GQ409562None   I13V, K20R, M36I, R41K, R57K, L63P, H69R, L89MA
 14411D_P114411GQ409568None   I13V, E35D, M36I, R41K, K45R, R57K, L63P, H69K, L89MA
 14888D_P114888GQ409570None   I13V, G16R, E35D, M36I, P39S, R41K, K45R, G52R, R57K, L63P, H69K, L89MA
 15460D_P115460GQ409574None   I13V, K14R, E35D, M36I, R41K, R57K, L63P, H69K, L89M, N98DA
 DT0010_05_P110GQ409593None   I13V, I15V, K20I, E35D, M36I, R41K, I62V, L63P, I64M, G68E, H69R, L89MA
 DT1745_05_P11745GQ409602None   I13V, G17D, E35D, M36I, R41K, R57K, L63P, H69K, L89MA
 DT2295_05_P12295GQ409604None   T12A, I13V, I15V, K20R, M36I, R41K, I62V, L63P, H69K, L89M, I93LA
 DT2986_05_P12986GQ409611None   L10I, I13V, E35D, M36I, P39Q, R41K, K45R, I62V, L63P, H69Q, L89MA
 DT3282_05_P13282GQ409614None   L10I, I13V, G16E, E35D, M36I, R41K, K45R, R57K, L63P, H69K, K70R, L89MA
 DT3793_05_P13793GQ409625None   I13V, E35D, M36I, R41K, R57K, D60E, L63P, H69K, L89MA
Selimova (2010)03MOSR03MOSRHM345538None   I13V, K14R, E35D, M36I, R41K, L63P, H69K, V77I, L89M, I93LA
 04MOS04MOSHM345539None   L10I, E35D, M36I, R41K, L63P, H69K, I72L, L89M, I93LA
 17MOS17MOSHM345549None   E35D, M36I, R41K, K43KR, L63P, H69K, V77I, L89M, I93LA
 20MOS20MOSHM345552None   L10I, E35D, M36I, R41K, L63P, H69Q, I72IV, V77I, L89M, I93ILA
Soares (2010)CM04_089CM04_089GU366141None   L10V, I13V, K20I, L33V, E35N, M36I, N37D, R41K, L63P, G68E, H69R, V77I, L89MA
Tovanabutra (2010)KECst_013KECst_013FJ623485None   I13V, K14R, E35D, M36I, N37D, R41K, R57K, L63P, H69K, L89MA
 KECst_010KECst_010FJ623491None   I13V, I15V, E35D, M36I, R41K, I62V, L63P, C67S, H69K, V77I, L89MA
Towler (2010)322176-A322176-AHM037813None   I13V, E35D, M36I, R41K, R57K, L63P, H69K, K70R, I72IV, L89MA
 11337194-AHM037814None   I13V, K14R, I15V, E35D, M36I, N37D, R41K, R57K, D60E, L63P, H69KA
  416275-MHM037886None   I13V, K14R, I15V, E35D, M36I, N37D, R41K, R57K, D60E, L63P, H69KA
  503727-GHM037897None   I13V, K14R, I15V, E35D, M36I, N37D, R41K, R57K, D60E, L63P, H69KA
 2436546-PHM037826None   I13V, K14R, K20I, M36I, P39Q, R41K, L63P, H69K, L89MA
  519810-RHM037891None   I13V, K14R, K20I, M36I, P39Q, R41K, L63P, H69K, L89MA
 321288-A321288-AHM037842None   I13V, E35D, M36I, R41K, K45R, R57K, L63P, H69K, L89MA
 335391-Z335391-ZHM037850None   I13V, K20R, M36I, R41K, R57K, L63P, H69K, K70R, L89MA
 385463-H385463-HHM037865None   I13V, K20KI, E35D, M36I, R41K, R57K, L63P, H69K, K70KR, T74TS, V75VI, L89MA
 427986-C427986-CHM037874None   I13V, E35D, M36I, K45R, R57K, L63P, H69K, L89MA
 430253-Z430253-ZHM037876None   I13V, K20R, M36I, R41K, R57K, L63P, H69K, K70R, V82VI, L89MA
 436063-G436063-GHM037879None   I13V, K14R, E35D, M36I, N37D, R41K, R57K, D60E, L63P, H69K, L89MA
Vinogradova (2010)Dag35Dag35GQ867626None   I13V, K14R, E35D, M36I, R41K, L63P, H69K, V77I, L89M, I93LA
 Dag24Dag24GQ867631None   I13V, K14KR, E35D, M36I, R41K, L63P, C67Y, H69K, V77I, L89M, I93LA
Yang (2010)20106934492010693449JQ616888None   I13V, G16A, M36I, R41K, K45R, L63P, H69K, L89M, I93MA
 20106934682010693468JQ616912None   L10I, I13V, E35D, M36I, R41K, K45R, R57K, L63P, H69Q, L89MA
Aghokeng (2011)HJ1950HJ1950JN639453None   I13V, E35D, M36I, R41K, I62V, L63P, H69K, I72E, L89MA
 SK9037-PISK9037-PIHQ864330None   L10LI, T12PS, I13V, L19V, E35D, M36I, R41K, R57K, D60E, L63P, H69K, I72IM, V77I, L89MA
 SK8011-PISK8011-PIHQ864341None   I13V, E35D, M36I, N37D, R41K, L63P, H69K, K70R, L89MA
 SK8034-PISK8034-PIHQ864342None   L10IV, I13V, K20KT, E35DN, M36L, N37D, R41K, R57K, L63P, H69K, L89MA
 SK9027-PISK9027-PIHQ864373None   I13V, G17E, K20I, E35D, M36I, R57K, D60E, L63P, H69K, L89MA
 SK2003-PISK2003-PIHQ864376None   L10I, I13V, L19LV, K20IM, E35D, M36I, R41K, L63P, H69Q, I72Q, L89MA
Avi (2011)200u200uGQ926735None   I13V, I15V, L19I, E35D, M36I, R41K, L63P, H69K, L89MA
Charpentier (2011)11CP 001 554 None   I13V, L19LI, E35D, M36I, R41K, L63P, H69K, I72IV, L89MA
 219CP 001 004 None   I13V, E35D, M36I, R41K, K45R, I62V, L63P, G68E, H69R, L89MA
Charpentier (2011)CR-26CR-26FJ688232None   L10I, I13V, K20IV, E35DN, M36I, R41K, K43KR, L63P, H69Q, I72V, V77VI, L89MA
 CR-27CR-27FJ688233None   L10I, I13V, E35D, M36I, R41K, L63P, I66IN, C67CG, H69Q, I72IATV, L89MA
El Annaz (2011)1208712087HQ393311None   I13V, K20R, E35D, M36I, N37D, P39Q, R41K, L63P, H69K, I72V, L89M, T91NA
Fokam (2011)CIRCB-7842CIRCB-7842JQ796155None   I13V, I15V, E35D, M36I, R41K, R57K, D60E, L63P, H69K, V77I, L89MA
Hamers (2011)CP076301542CP076301542HQ993585None  I50KE35D, M36T, R41K, D60E, L63P, H69K, V77I, L89MA
 CP076301570CP076301570HQ993610None   I13V, E35D, M36I, R41K, K45R, R57K, D60DE, L63P, H69K, I72M, L89MA
 CP076301577CP076301577HQ993616None   T12R, I13L, E21X, E35D, M36I, R41K, K45R, R57K, L63P, H69K, L89MA
 CP076301590CP076301590HQ993628None   L10I, I13V, E35D, M36I, N37D, R41K, R57K, L63P, H69Q, L89MA
 CP076301596CP076301596HQ993634None   E35D, M36I, R41K, K45R, R57K, L63P, H69K, L89MA
 CP076301599CP076301599HQ993637None   K14R, E35D, M36I, N37E, P39PS, R41K, R57K, I62IV, L63P, H69K, V77VI, L89MA
 CP076301602CP076301602HQ993640None   I13V, I15V, E35D, M36I, N37D, R41RK, R57K, L63P, H69K, V77VI, L89MA
 CP076301608CP076301608HQ993645None   I13V, I15V, G16A, E35D, M36I, R41K, I62V, L63P, I64M, H69K, L89MA
 CP076301683CP076301683HQ993679None   I13V, K14KR, E35D, M36I, N37D, R41K, R57K, L63P, H69K, L89MA
 CP076301684CP076301684HQ993680None   I13V, E35D, M36I, R41K, K45R, R57K, L63P, H69K, I72V, L89MA
 CP076301687CP076301687HQ993683None   I13V, K14R, K20KR, E35D, M36I, R41K, K45R, R57K, L63P, H69K, L89MA
 CP076301718CP076301718HQ993711None   L5X, L10V, I13V, E35D, M36I, R41K, D60E, Q61E, I62V, L63P, H69K, L89MA
 CP076301733CP076301733HQ993723None   K20R, E35D, M36I, N37D, R41K, R57K, D60E, I62V, L63P, I64L, H69K, L89MA
 CP076302243CP076302243HQ993816None   L19Q, E35D, M36I, R41K, R57K, L63P, H69K, K70R, L89MA
 CP076302254CP076302254HQ993823None   I13V, E35D, M36I, R41K, K45R, R57K, L63P, H69K, L89MA
 CP076302286CP076302286HQ993836None   L10I, I13V, E35D, M36I, R41K, K43R, R57K, L63P, H69K, K70R, L89MA
 CP076304141CP076304141HQ993877None   I13V, E35D, M36I, R41K, K45R, R57K, L63P, H69K, L89MA
 CP076304164CP076304164HQ993884None   L10V, E35D, M36I, R41K, K45R, R57K, L63P, H69K, L89MA
 CP076304203CP076304203HQ993905None   L10V, I13V, L19V, E35D, M36I, N37E, R57K, Q61E, L63P, H69K, K70R, L89MA
 CP076304235CP076304235HQ993928None   I13V, K14R, E35D, M36I, N37T, R41K, R57K, L63P, H69K, K70E, L89MA
 CP076304237CP076304237HQ993930None   K14R, E35D, M36I, N37D, R41K, R57K, D60E, L63P, H69K, T74TS, L89MA
 CP076304251CP076304251HQ993940None   I13V, I15V, E35D, M36I, N37D, R41K, R57K, L63P, H69K, K70R, L89MA
 CP076304270CP076304270HQ993958None   I13V, K14R, E35D, M36I, R41K, R57K, I62IV, L63P, H69K, I72V, L89MA
 CP076304282CP076304282HQ993967None   I13V, K14R, E35D, M36I, R41K, R57K, L63P, H69K, L89MA
 CP076304402CP076304402HQ993972None   I13V, K14R, I15V, K20R, E35D, M36I, N37D, R41K, R57K, L63P, H69KA
 CP076300753CP076300753HQ994934None   I13V, I15V, E35D, M36I, R41K, R57K, L63P, H69K, L89MA
 CP076300823CP076300823HQ994951None   I13V, E35D, M36I, R41K, K45R, R57K, L63P, H69K, K70R, L89MA
 CP076300881CP076300881HQ994964None   I13V, I15V, E35D, M36I, R41K, K45R, R57K, L63P, H69K, L89MA
 CP076300883CP076300883HQ994965None   I13V, K14R, E35D, M36I, R41K, K45R, R57K, L63P, H69K, L89MA
 CP076300897CP076300897HQ994970None   I13V, E35D, M36I, N37D, R41K, K43R, R57K, D60E, L63P, I64L, H69K, L89MA
 CP076301786CP076301786HQ994972None   I13V, I15V, E35D, M36I, R41K, K45R, R57K, L63P, H69K, L89MA
 CP076301823CP076301823HQ994981None   L10I, I13V, E21K, E35D, M36I, R41K, R57K, D60E, Q61E, L63P, C67Y, H69K, K70R, L89MA
 CP076301837CP076301837HQ994988None   I13V, K20R, E35D, M36I, R41K, K45R, R57K, L63P, H69K, L89MA
 CP076301844CP076301844HQ994990None   I13V, E35D, M36I, R41K, R57K, L63P, H69K, L89MA
 CP076301853CP076301853HQ994994None   T12A, I13V, I15V, K20I, M36I, R41K, L63P, H69K, L89MA
 CP076301873CP076301873HQ995005None   I13V, K20I, E35D, M36V, R41K, R57K, L63P, H69K, L89MA
 CP076301978CP076301978HQ995014None   I13V, E35D, M36I, R41K, R57K, L63P, H69K, L89MA
 CP076301998CP076301998HQ995016None   I13V, K14R, E35D, M36I, R41K, K45R, R57K, D60E, L63P, H69K, L89MA
 CP076302043CP076302043HQ995019None   I13V, E35D, M36I, R41K, R57K, L63P, H69K, L89MA
 CP076302062CP076302062HQ995025None   I13V, K20KI, M36I, N37ND, R41RK, L63P, G68GE, H69KR, L89IMA
 CP076302073CP076302073HQ995033None   I13V, G16GE, E35D, M36I, P39S, R41K, R57K, I62V, L63P, H69K, L89MA
 CP076302076CP076302076HQ995035None   I13V, E35D, M36I, R41K, R57K, L63P, H69K, L89MA
 CP076302957CP076302957HQ995045None   I13V, E35D, M36I, R41K, R57K, L63P, H69K, L89MA
 CP076302979CP076302979HQ995056None   I13V, K14R, I15V, E35D, M36I, N37D, R57K, L63P, H69K, L89MA
 CP076302991CP076302991HQ995063None   T12V, I13V, E35D, M36I, R41K, R57K, L63P, H69K, L89MA
 CP076300808CP076300808HQ995102None   I13V, I15V, E35D, M36I, R41K, K43R, R57K, L63P, H69K, K70R, L89MA
 CP076300813CP076300813HQ995105None   I13V, K14R, E35D, M36I, N37D, R41K, K45R, L63P, H69K, L89MA
 CP076300835CP076300835HQ995110None   T12A, I13V, K14R, E35D, M36I, N37NS, R41K, R57K, L63P, H69K, L89MA
 CP076300857CP076300857HQ995121None   I13V, I15V, K20R, E35D, M36I, R41K, R57K, L63P, H69K, L89MA
 CP076301796CP076301796HQ995148None   I13V, E35D, M36I, R41K, R57K, L63P, H69K, K70R, L89MA
 CP076301807CP076301807HQ995152None   I13V, E35D, M36I, R41K, R57K, L63P, H69K, K70R, L89MA
 CP076302066CP076302066HQ995206None   I13V, I15V, K20R, E35D, M36I, R41K, R57K, L63P, H69K, L89MA
 CP076302954CP076302954HQ995217None   I13V, K14R, I15V, E35D, M36I, N37D, R57K, L63P, H69K, L89MA
 CP076303052CP076303052HQ995234None   T12V, I13V, E35D, M36I, R41K, R57K, L63P, H69K, I72V, L89MA
 CP076303057CP076303057HQ995238None   I13V, K14E, E21K, E35D, M36I, R41K, R57K, L63P, H69K, L89MA
 CP076303069CP076303069HQ995249None   I13V, K14R, G17E, Q18H, K20R, E35D, M36I, R57K, L63P, H69K, L89MA
 CP076303081CP076303081HQ995258None   I13V, E35D, M36I, R41K, R57K, L63P, H69K, L89MA
 CP076303082CP076303082HQ995259None   I13V, E35D, M36I, R41K, R57K, L63P, H69K, K70KR, L89MA
 CP076303088CP076303088HQ995265None   I13V, L19P, K20I, E35D, M36I, R41K, L63P, E65D, H69K, L89MA
 CP076303094CP076303094HQ995271None   I13V, K20R, M36I, N37D, R41K, R57K, I62V, L63P, H69K, T74A, L89MA
 CP076303103CP076303103HQ995279None   I13V, I15V, E35D, M36I, N37D, R57K, D60E, Q61E, L63P, H69K, I72IV, L89MA
 CP076303109CP076303109HQ995285None   I13V, E35D, M36L, P39Q, R41K, R57K, L63P, I64L, H69K, L89MA
 CP076303127CP076303127HQ995301None   T12A, I13V, K14KR, E35D, M36I, R41K, R57K, L63P, H69K, L89MA
 CP076300711CP076300711HQ995313None   T12I, I13V, L19Q, E35D, M36I, R41K, K45R, R57K, L63P, H69K, L89MA
 CP076300739CP076300739HQ995327None   I13V, K20R, E35D, M36I, R41K, R57K, L63P, H69K, L89MA
 CP076300765CP076300765HQ995336None   L10V, E35D, M36I, R41K, R57K, L63P, H69K, L89MA
 CP076300779CP076300779HQ995346None   L10I, I13V, K14KR, E35D, M36I, N37D, R41K, K45R, R57K, L63P, H69K, K70R, L89MA
 CP076300790CP076300790HQ995354None   I13V, K14R, I15V, E35D, M36I, R41K, K45R, R57K, L63P, H69K, L89MA
 CP076300797CP076300797HQ995358None   I13V, E35D, M36I, R41K, R57K, L63P, I64M, H69K, L89IMA
 CP076301889CP076301889HQ995368None   Q7H, I13V, E35D, M36I, R41K, R57K, L63P, H69K, L89MA
 CP076301924CP076301924HQ995395None   I13V, K14R, G16E, K20I, E35D, M36I, R41K, K45R, R57K, L63P, H69K, L89MA
 CP076301942CP076301942HQ995408None   W6L, I13V, E35D, M36I, R41K, R57K, Q61E, L63P, H69K, L89MA
 CP076301950CP076301950HQ995415None   I13V, E35D, M36I, R41K, R57K, L63P, I64M, H69K, L89IA
 CP076301971CP076301971HQ995435None   I13V, K14R, E35D, M36I, R41K, K45R, R57K, L63P, H69K, L89MA
 CP076302035CP076302035HQ995459None   I13V, E34K, E35D, M36I, R41K, K45R, R57K, L63P, H69K, K70R, L89MA
 CP076302928CP076302928HQ995485None   I13V, I15V, E35D, M36I, R41K, K45R, R57K, L63P, H69K, K70R, L89MA
Ndembi (2011)AICPS399AICPS399HQ702618None   I13V, E35D, M36I, P39Q, R41K, R57K, D60E, L63P, H69K, N83Y, N88Y, L89MA
 NTCPS726NTCPS726HQ702620None   I13V, E35D, M36I, R41K, R57K, D60E, L63P, H69K, L89MA
 NTCPS720NTCPS720HQ702626None   I13V, E35D, M36I, R41K, R57K, L63P, H69K, L89MA
 AICPS438AICPS438HQ702638None   I13V, L19I, K20R, E35D, M36I, N37D, R41K, K43R, R57K, L63P, H69K, L89MA
 AICPS495AICPS495HQ702640None   I13V, K20I, E35D, M36I, R41K, R57K, D60E, L63P, H69K, T74A, L89MA
 AICPS303AICPS303HQ702651None   L10V, I13V, I15V, E35D, M36I, R41K, R57K, L63P, H69K, L89MA
 AICPS283AICPS283HQ702652None  L33FI13V, E35D, M36I, R41K, I62V, L63P, I64L, H69K, K70R, L89MA
 NTCPS709NTCPS709HQ702661None   I13V, K20R, E35D, M36I, R41K, K45R, R57K, L63P, H69K, V77I, L89MA
 AICPS164AICPS164HQ702671None   I13V, E35D, M36I, N37D, R41K, R57K, Q61H, L63P, G68E, H69N, L89MA
De Gascun (2012)IRL07063IRL07063JN622368None   L10I, I13V, K14KR, M36I, R41K, L63P, H69Q, L89MA
Dvali (2012)R075R075GQ268475None   L10I, I13V, E35D, M36I, N37D, R41K, D60DE, L63P, H69K, V77I, L89M, I93ILA
 R043R043GQ268449None   I13V, M36I, R41K, L63P, H69K, L89M, I93LA
 R114R114GQ268507None   L10LV, I13IV, G16A, L19LV, K20KR, E35D, M36I, R41K, L63P, H69K, V77VI, L89M, I93LA
 R104R104GQ268498None   I13V, K14KR, E35D, M36I, N37D, L63P, H69K, L89M, I93LA
 R151R151GQ268525None   I13V, K14R, E35D, M36I, R41K, L63P, H69K, V77I, L89M, I93LA
 R101R101GQ268495None   I13V, I15V, E35D, M36I, R41K, Q61E, L63P, H69K, L89M, I93LA
 R149R149FJ456914None   I13V, E35D, M36I, R41K, L63P, H69K, V77I, L89MA
 R012R012FJ456896None   I13V, M36I, R41K, D60DE, L63P, H69K, L89M, I93LA
Fernandez-Garcia (2012)Irkutsk_5Irkutsk_5JQ292891None   I13V, I15V, E35D, M36I, R41K, L63P, H69K, V77I, L89M, I93LA
 RUA001RUA001JQ292893None   I13V, L19I, E35D, M36I, R41K, L63P, H69K, V77I, L89M, I93LA
 RU_915_1035RU_915_1035JQ292897None   L10I, K14R, E35D, M36I, R41K, L63P, H69K, L89M, I93LA
Karlsson (2012)SE_122SE_122JQ698751None   L10I, I13V, K14R, E35D, M36I, R41K, R57K, L63P, H69Q, V77I, L89MA
Nazziwa (2012)50237015023701JX499000None   I13V, K14R, E35D, M36I, N37D, R41K, R57K, L63P, H69R, I72V, L89MA
 70538017053801JX499016None   I13V, E35D, M36I, R41K, R57K, L63P, H69K, K70R, L89MA
Reynolds (2012)A0722A0722-0JN652139None   I13V, E35D, M36I, R41K, K45R, L63P, H69K, V77VI, L89MA
 K0808K0808-0JN652168None   L10LIV, I13V, E35D, M36I, R41K, K43KR, R57K, L63P, H69KQ, K70R, L89MA
  K0808-1JN652204None   L10I, I13V, E35D, M36I, R41K, R57K, L63P, H69K, K70R, L89MA
Sigaloff (2012)KECGP010KECGP010JN628462None   T12P, I13V, E35D, M36I, R41K, K45R, R57K, L63P, H69K, L89IA
 KELKN226KELKN226JN628498None   I13V, E35D, M36I, R41K, K45R, L63P, H69K, L89MA
 KELKN249KELKN249JN628512None   L19I, E35D, M36I, R41K, R57K, L63P, E65D, H69K, L89MA
Ssemwanga (2012)RCC_TDR_358561RCC_TDR_358561JQ266029None   I13V, K14R, K20I, E35D, M36I, R41K, L63P, H69K, L89M, I93VA
 RCC_TDR_480059RCC_TDR_480059JQ266032None   I13V, K14N, E35D, M36I, R41K, D60E, L63P, C67Y, H69K, K70R, L89MA
 RCC_TDR_355543RCC_TDR_355543JQ266062None   I13V, K20R, E35D, M36I, R41K, R57K, L63P, H69K, L89MA
Ssemwanga (2012)6699HR6699HRJF800207None   I13V, K20R, E35D, M36I, N37D, R57K, L63P, H69K, L89MA
 3203HR3203HRJF800224None   I13V, K20R, E35D, M36I, R41K, R57K, L63P, H69K, L89MA
Yang (2012)KN-100KN-100JQ616940None   T12S, I13V, K14R, E35D, M36I, N37D, R41K, D60E, I62V, L63P, H69K, L89MA
Youngpairoj (2012)cm10bbcm10bbDQ166433None   L10I, I13V, E35N, M36I, N37D, R41K, L63P, H69K, L89MA
Antoniadou (2013)GR130GR130KF671839None   E35D, M36I, N37E, R41K, L63P, H69K, L89M, I93LA
 GR098GR098KF671808None   I13V, K14R, E35D, M36I, R41K, K45R, R57K, L63P, H69K, L89MA
 GR106GR106KF671815None   I13V, K14R, E35D, M36I, R41K, K45R, R57K, L63P, H69K, L89MA
 GR132GR132KF671840None   I13V, E35D, M36I, P39L, R41K, K45R, R57K, I62V, L63P, I64L, H69K, L89MA
 GR124GR124KF671833None   I13V, K14R, E35D, M36I, P39L, R41K, K45R, R57K, I62V, L63P, I64M, H69K, L89MA
Avidor (2013)1612_MN1612_MNKC184212None   T12P, I13V, E35D, M36I, R57K, I62V, L63P, H69K, T74S, L89MA
 17851785 None   L10I, E35D, M36I, R41K, L63P, H69K, L89M, I93LA
 730730KC184389None   I13V, K14KQ, K20KR, E35D, M36I, R41K, L63P, H69K, L89M, I93LA
 20732073KC184351None   I13V, I15V, M36I, R41K, Q61E, L63P, I64M, H69K, L89M, I93LA
 16031603KC184208None   L10I, I13V, L19I, K20KI, E35D, M36I, R57K, D60E, I62V, L63P, H69K, T74S, L89MA
 15321532KC184193None   I13V, I15IV, E35D, M36I, R41K, L63P, H69K, V77I, L89M, I93LA
 19371937KC184273None   I13V, I15V, E35D, M36I, N37D, R41K, L63P, H69K, L89M, I93LA
 19511951KC184286None   T12TA, I13IV, K14R, K20KR, E35D, M36I, R41K, L63P, H69K, L89M, I93LA
 19541954KC184288None   E35D, M36I, R41K, L63P, H69K, I72V, V77I, L89MA
 457457KC184378None   I13V, K14R, E35D, M36I, R41K, L63P, H69K, L89M, I93LA
 353353KC184368None   I13V, E35D, M36I, R57K, D60AE, I62V, L63P, H69K, T74S, L89MA
 20262026KC184344None   I13V, E35D, M36I, R57K, D60E, I62V, L63P, H69K, T74S, L89MA
 10511051KC184163None   E35D, M36I, R41K, L63P, H69K, L89M, I93LA
 17411741KC184225None   K14R, K20R, E35D, M36I, N37D, R41K, L63P, H69K, K70KR, L89M, I93LA
 441441KC184375None   I13V, K14R, E35D, M36I, R41K, L63P, H69K, L89M, I93LA
Bila (2013)MzNat132HIV-1KF927389None   I13V, K14R, E35D, M36I, R41K, K45R, R57K, L63P, H69K, V77I, L89MA
Brooks (2013)CAN2013-122CAN13-122KF727735None   I13V, E35D, M36I, R57K, L63P, H69K, V77I, L89MA
Chow (2013)10MYKJ00610MYKJ006KC477942None   E35D, M36I, L63P, H69K, I93LA
Frentz (2013)EHR-03705EHR-03705JX299608None   I13IV, K14R, E35D, M36I, N37D, R41K, L63P, H69K, L89M, I93LA
 EHR-10570EHR-10570JX299707None   I13V, K14R, E35D, M36I, R41K, L63P, H69K, A71AT, V77I, L89M, I93LA
 EHR-13657EHR-13657JX299764None   I13V, K14R, G17E, K20I, L33V, E35N, M36I, R41K, D60E, L63P, H69K, T74S, L89MA
 EHR-18756EHR-18756JX299849None   I13V, E35D, M36I, R57K, I62V, L63P, H69K, T74S, L89MA
 EHR-36798EHR-36798JX300157None   I15K, G16W, G17R, E21K, E35D, M36I, R41K, L63P, H69K, V77I, L89M, I93LA
 EHR-37765EHR-37765JX300174None   L10I, I13V, E35D, M36I, R41K, L63P, C67H, H69K, K70R, V77I, L89MA
 EHR-61317EHR-61317JX300561None   T12TA, I13V, K14R, E35D, M36I, R41K, K45R, R57K, L63P, H69K, L89MA
 EHR-63222EHR-63222JX300598None   I13IV, K14R, E35D, M36I, N37D, R41K, L63P, H69K, L89M, I93LA
 EHR-73556EHR-73556JX300787None   I13V, E35D, M36I, R57K, I62IV, L63P, H69K, L89MA
 EHR-76546EHR-76546JX300850None   L10I, I13V, K14E, G16E, L19IT, E35D, M36I, K45R, R57K, L63P, H69K, L89MA
 EHR-780208EHR-780208JX300885None   T12S, I13V, K14T, I15V, L19Q, K20R, M36I, N37NS, R41K, L63P, H69K, L89M, I93LA
 EHR-84128EHR-84128JX300966None   L10I, I13V, K14KR, I15IV, E35D, M36I, R41K, R57K, L63P, H69Q, V77I, L89MA
Hassan (2013)RS09000869RS09000869HQ441614None   E35D, M36I, N37D, R41K, R57K, L63P, H69K, K70R, V75I, L89MA
 RS09000881RS09000881HQ441626None   I13V, K14R, I15IV, E35D, M36I, R41K, K45R, R57K, L63P, H69K, L89MA
 RS09000892RS09000892HQ441637None   I13V, E35D, M36I, R41K, R57K, L63P, H69K, K70KR, L89MA
 RS09000898RS09000898HQ441643None   L10I, I13V, E35D, M36I, R41K, K45R, R57K, L63P, H69K, V77I, L89M, L97IA
 RS09000914RS09000914HQ441659None   I13V, E35D, M36I, N37ND, R41K, K43R, G49GR, R57K, L63P, H69K, K70KR, L89MA
 RS09000934RS09000934HQ441676None   I13V, E35D, M36I, N37D, R41K, R57K, L63P, H69K, L89MA
 RS09000946RS09000946HQ441688None   I13V, K14R, E35D, M36I, N37D, R41K, R57K, L63P, H69K, L89MA
 RS11000281RS11000281JQ698371None   I13V, E35D, M36I, N37D, K45KR, R57K, I62V, L63P, G68GE, H69KR, L89MA
 RS11000310RS11000310JQ698392None   I13V, E35D, M36I, R41K, R57K, L63P, H69K, L89MA
 RS11000316RS11000316JQ698395None   I13V, I15V, G16E, K20I, E35D, M36I, R41K, K45R, R57K, L63P, H69K, K70R, L89MA
 RS11000325RS11000325JQ698402None   I13V, M36I, N37D, R41K, D60E, L63P, H69K, L89M, I93LA
 RS11000334RS11000334JQ698409None   I13V, E35D, M36I, R41K, K45R, R57K, L63P, H69K, L89MA
 RS11000337RS11000337JQ698411None   L10I, I13V, K14R, L19V, E35D, M36I, R41K, R57K, L63P, H69K, L89MA
 RS11000346RS11000346JQ698418None   I13V, E35D, M36I, R41K, R57K, L63P, H69K, L89MA
 RS11000362RS11000362JQ698428None   I13V, E35D, M36I, N37D, R41K, R57K, D60E, L63P, H69K, K70R, L89MA
Hawke (2013)9923717699237176KC238296None   K14R, I15V, E35D, M36I, N37D, R41K, R57K, L63P, H69K, L89MA
Inzaule (2013)437437JQ914086None   L19I, E35D, M36I, N37ND, R41K, R57K, L63P, H69K, L89MA
  437JQ914064None   L19I, E35D, M36I, N37D, R41K, R57K, L63P, H69K, L89MA
 113113JQ914078None   I13V, I15IV, E35D, M36I, N37D, R41K, K45R, R57K, L63P, H69K, L89MA
  113JQ914072None   I13V, E35D, M36I, N37D, R41K, K45R, R57K, L63P, H69K, L89MA
 127127JQ914096None   I13V, K14R, K20R, E35D, M36I, N37D, R41K, K45R, R57K, L63P, G68E, H69K, L89MA
Kemal (2013)73487348JQ364517None   I13V, E35D, M36I, N37D, R41K, K43R, R57K, D60E, L63P, H69K, L89MA
 80088008JQ364531None   I13V, E35D, M36I, R41K, K45R, R57K, L63P, H69K, L89MA
Kiptoo (2013)KTL017KTL017KC517021None   I13V, E35D, M36I, R41K, R57K, L63P, H69K, L89MA
 KAP064KAP064KC516912None   I13V, K14KR, E35D, M36I, R41K, K45R, R57K, L63P, H69KR, L89MA
 KTL077KTL077KC517016None   R8RQ, L10I, I13V, I15V, L19P, E35D, M36I, N37D, R41K, K45R, R57K, D60E, L63P, H69K, L89MA
 SNH052SNH052KC516946None  V32VLI13V, Q18QL, E21ED, E35D, M36I, R41K, L63P, H69K, L89MA
Masimba (2013)TZ.HLM.016TZ.HLM.016KC537239None   I13V, K20KR, E35D, M36I, R41K, K43KR, R57K, L63P, H69K, L89MA
Pircher (2013)B1110B1110JX110297None   I13V, E35D, M36I, R41K, L63P, H69K, K70R, L89MA
 B1109B1109JX110296None   T12S, I13V, G17E, L19I, K20I, E35N, M36I, I62V, L63P, H69K, K70N, I72V, V77I, L89MA
Rusine (2013)759H759HKC841770None   L10LM, I13V, K20I, E35N, M36I, P39Q, R41K, K45R, R57K, Y59H, Q61N, L63P, H69KQ, I72IM, V77I, L89MA
 729H729HKC841751None   T12A, I13V, K14KR, E35ED, M36I, R41K, K45KR, R57K, L63P, H69K, L89MA
 762H762HKC841772None   I13V, K14R, E35D, M36I, R41K, R57K, L63P, H69K, L89MA
Sigaloff (2013)JCR104_0JCR104_0JX182001None   L5F, I13V, I15V, E35D, M36I, R41K, R57K, L63P, H69K, L89MA
 MBA079_0MBA079_0JX182024None   L10I, T12I, I13V, E35D, M36I, R41K, R57K, I62V, L63P, I64L, H69K, L89MA
 JCR079_0JCR079_0JX181995None   I13V, K14R, K20M, E35D, M36I, R41K, L63P, H69K, L89MA
 MBA064_0MBA064_0JX182023None   I3N, I13V, L19I, E35D, M36I, R41K, L63P, H69K, K70R, L89MA
Lapovok (2014)RU_NNG510RU_NNG510KJ722085None   I13V, E35D, M36I, R41K, L63P, H69K, V77I, L89M, I93LA
Stanojevic (2014)RS0531RS0531KF157489None   I13V, K14R, I15V, E35D, M36I, K45R, R57K, L63P, H69K, K70E, L89MA
 RS0534RS0534KF157491None   I13V, K14R, I15V, E35D, M36I, K45R, R57K, I62V, L63P, H69K, K70E, L89MA
Steegen (2014)09ZAKS01209ZAKS012KJ176650None   L63P, H69K, A71TA