Protease Inhibitors

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Protease Inhibitors

Subtype	A
Gene	PR
Mutation	K20R
Rx	PI-naive
IncludeMixtures	No

References	126
Patients	529
Isolates	542

Sequences matching input query are shown below. Original reference, patient identifier, isolate name, partial treatment histories and accession number are indicated. Complete treatment histories, when available, can be accessed by clicking the isolate name. Sequences may additionally be downloaded in the fasta format, or viewed as individual or composite alignments using the options above. If the user wishes to view individual alignments of isolates for which there are multiple clones, the user can choose to view either an alignment of consensus sequences derived from the clones or an alignment of each clone as well as a consensus sequence.

Author (yr)	Patient	Isolate	Acc#	PIs	PIMinorDRMs	OtherMut	Subtype
Carr (1999)	SE6594	SE6594	AF069672	None		I13V, I15V, K20R, E35D, M36I, R41K, R57K, H69K, L89M	A
	SE7253	SE7253	AF069670	None		I13V, K20R, E35D, M36I, R41K, R57K, H69K, L89M	A
Becker-Pergola (2000)	326.636	BPG326-636	AF177358	None		I13V, K20R, E35D, M36I, R41K, R57K, H69K, L89M	A
	326.642	BPG326-642	AF177359	None		I13V, K20R, E35D, M36I, R41K, R57K, H69K, L89M	A
Nkengasong (2000)	JN_IC71	JN_IC71	AF216989	None		I13V, K14R, K20R, E35D, M36I, R41K, I62V, H69K, L89M	A
	JN_IC70	JN_IC70	AF216988	None		I13V, K14R, K20R, M36I, N37D, R41K, I62V, H69K, L89M	A
	JN_IC245	JN_IC245	AF216985	None		I13V, K14R, K20R, M36I, R41K, H69K, L89M	A
	JN_IC212	JN_IC212	AF216982	None		I13V, K14R, K20R, E35N, M36I, R41K, I64L, H69K, L89M	A
Tscherning-Casper (2000)	2236Pol	2236Pol	AF268331	None		I13V, K14R, G16E, K20R, E35D, M36I, R41K, H69K, K70R, L89M	A
Vergne (2000)	LVMP1019	LVMP1019	AJ286932	None		K20R, E35D, M36I, N37D, R41K, H69K, L89M	A
Eshleman (2001)	SE592	SE592	AF388151	None		L10LV, T12TA, I13V, I15IV, K20R, E35D, M36I, R41K, H69K, K70KR, L89M	A
	SE13	SE13	AF388135	None		I13V, K20R, M36I, R41K, I64V, I72V	A
	SE807	SE807	AF388129	None		I13V, K14R, K20R, E35D, M36I, R41K, R57K, H69K, L89M	A
	SE718	SE718	AF388116	None		I13V, K20R, E35D, M36I, R41K, R57K, H69K, L89M	A
	SE687	SE687	AF388113	None		I13V, K20R, E35D, M36I, R41K, R57K, H69K, K70KR, L89M	A
	SE584	SE584	AF388096	None		I13V, K20R, E35D, M36I, R41K, R57K, H69K, L89M	A
Koch (2001)	NK-18	NK-18	AY007747	None	L33F	L10I, I13V, K14R, K20R, M36I, R41K, R57K, L63V, H69Q, K70R, L89M	A
Weidle (2001)	PW_UG4397	PW_UG4397	AF358748	None		I13V, K20R, E35D, M36I, R41K, I62V, H69K, L89M	A
	PW_UG4399	PW_UG4399	AF358749	None		L10I, I13V, K20R, E35D, M36I, R41K, R57K, L63T, C67Y, H69K, L89M	A
	PW_UG460	PW_UG460	AF358753	None		I13V, Q18QE, K20R, E35D, M36I, R41K, R57K, H69K, L89M	A
	PW_UG471	PW_UG471	AF358757	None		I13V, G16E, K20R, E35D, M36I, R41K, R57K, H69K, K70KR, L89M	A
Dowling (2002)	KSM4030	KSM4030	AF457079	None		I13V, K14R, K20R, E35D, M36I, N37D, R41K, R57K, H69K, L89M	A
	KSM4028	KSM4028	AF457078	None		I13V, K14R, K20R, E35D, M36I, N37D, R41K, R57K, Q61E, H69K, K70R, L89M	A
	KSM4021	KSM4021	AF457075	None		I13V, K14R, K20R, E35D, M36I, N37D, R41K, R57K, H69K, L89M	A
	KNH1144	KNH1144	AF457066	None		I13V, G16A, K20R, E35D, M36I, N37D, R41K, R57K, D60E, I62V, H69K, L89M	A
	KNH1135	KNH1135	AF457065	None		L10I, I13V, G16E, K20R, E35D, M36I, P39S, R41K, K45R, R57K, D60E, L63S, H69K, L89M	A
	KER2009	KER2009	AF457053	None		L10I, I13V, K20R, E35D, M36I, N37D, R41K, K45R, R57K, H69K, K70R, L89M	A
	KER2008	KER2008	AF457052	None		L10V, I13V, I15V, Q18E, L19M, K20R, E35D, M36I, R41K, R57K, I62V, L63S, H69K, L89M	A
Eshleman (2002)	132318b	132318b	AF410221	None		I13V, K20R, E35D, M36I, R41K, K45R, R57K, L63S, H69K, L89M	A
	132685m	132685m	AF410223	None		I13V, G16E, K20R, E35D, M36I, R41K, R57K, H69K, L89M	A
	148838k	148838k	AF410251	None		I13V, K14R, I15V, G16E, K20R, E35D, M36I, R41K, R57K, H69K, L89M	A
Fonjungo (2002)	CM215	CM215	AF406719	None		I13V, K20R, E35D, M36I, N37D, R41K, L63S, H69K, L89M, I93L	A
Tebit (2002)	99CMLB25	99CMLB25	AF355309	None		L10V, I13V, K20R, E35D, M36I, N37D, R41K, H69K, L89M	A
Vergne (2002)	LVLBV18_08	LVLBV18_08	AJ313398	None		I13V, K20R, E35D, M36I, R41K, H69K, L89M	A
	LVLBV02_08	LVLBV02_08	AJ313391	None		I13V, K14R, G16E, K20R, E35D, M36I, R41K, H69K, L89M	A
Hanna (2003)	HG040	HG040	AY049647	None		T12TA, I13V, I15V, K20R, E35D, M36I, R41K, H69K, L89M	A
Holguin (2003)	SP_LP11	SP_LP11	AF455609	None		I13V, K14R, G16E, K20R, E35D, M36I, R41K, R57K, H69K, L89M	A
Huang (2003)	UG273	UG273	AF447858	None		I13V, K20R, E35D, M36I, R41K, R57K, H69K, L89M	A
Jorgensen (2003)	JLB_Pat4	HIM419430	AJ419430	None		I13V, K14R, K20R, E35D, M36I, N37D, R41K, R57K, H69K, K70KR, L89M	A
Njouom (2003)	58pol	58pol	AY204320	None		I13V, K20R, E35N, M36I, N37D, R41K, K43R, H69K, L89M	A
Arroyo (2004)	01TZA359	01TZA359	AY253319	None		T12S, L19V, K20R, E35D, M36I, R41K, R57K, L63S, H69K, L89M	A
Eshleman (2004)	SE816	SE816_7d	AY428724	None		L10V, I13V, K20R, M36I, R41K, L63P	A
	SE807	SE807_7d	AY428723	None		I13V, K14R, G17GE, K20R, E35D, M36I, R41K, R57K, H69K, L89M	A
	SE687	SE687p	AY435396	None		I13V, K20R, E35D, M36I, R41K, R57K, H69K, K70R, L89M	A
		SE687_7d	AY428712	None		I13V, K20R, E35D, M36I, R41K, R57K, H69K, K70R, L89M	A
	SE584	SE584_7d	AY428695	None		I13V, K20R, E35D, M36I, R41K, R57K, H69K, L89M	A
Eshleman (2004)	ESH_Pat16	ESH253	AY435264	None		L10IV, I13V, G16E, K20R, E35D, M36I, P39PS, R41K, K45KR, R57K, L63V, H69K, I85IV, L89M	A
	ESH_Pat30	ESH839	AY435379	None		I13V, K14R, I15V, K20R, E35D, M36I, N37D, L63H, H69K, K70E, L89M	A
	ESH_Pat58	ESH487	AY435292	None		I13V, K20R, E35D, M36I, R41K, R57K, L63LP, E65D, H69K, L89M	A
	ESH_Pat66	ESH701	AY435332	None		I13V, K20R, E35D, M36I, R41K, R57K, H69K, L89M	A
	ESH_Pat85	ESH204	AY435255	None		I13V, K20R, E35D, M36I, R41K, R57K, H69K, L89M	A
	ESH_Pat89	ESH427	AY435290	None		L10IV, I13V, G16E, K20R, E35D, M36I, R41K, R57K, H69K, K70R, L89M	A
	ESH_Pat103	ESH798	AY435365	None		I13V, L19I, K20R, E35D, M36I, R41K, R57K, H69K, L89M	A
	ESH_Pat121	ESH589	AY435304	None		I13V, K20R, E35D, M36I, R41K, H69K, L89M	A
	ESH_Pat125	ESH877	AY435380	None		I13V, K14R, G16E, K20R, E35D, M36I, P39PS, R41K, H69K, L89M	A
	ESH_Pat140	ESH801	AY435354	None		I13V, K14KR, G17E, K20R, E35D, M36I, R41K, K45R, R57K, H69K, K70KR, L89M	A
Eshleman (2004)		SE801_7d	AY428717	None		I13V, K14KR, G17E, K20R, E35D, M36I, R41K, K45R, R57K, H69K, K70KR, L89M	A
Eshleman (2004)	ESH_Pat149	ESH667	AY425353	None		I13IV, K20R, E35D, M36I, R41K, R57K, H69K, L89M	A
Eshleman (2004)		SE667_7d	AY428705	None		I13IV, K20R, E35D, M36I, R41K, R57K, H69K, T74X, L89M	A
Eshleman (2004)	ABB27	ABB27	AY444194	None		I13V, K20R, E35D, M36I, N37D, R41K, K45R, L63P, I64M, H69K, I72V, V77I, L89M	A
	AB511	AB511	AY444188	None		I13V, K14KR, K20R, E35DN, M36I, N37D, R41K, H69K, L89M	A
	225_692	225_692	AY444195	None	V11I	I13V, G16E, K20R, E35D, M36I, R41K, L63V, G68E, H69K, K70R, L89M, T91V, I93L	A
	326_642	326_642	AY444187	None		I13V, K20R, E35D, M36I, R41K, R57K, H69K, L89M	A
Gulick (2004)	RG415	RG415w0		None		K14R, L19I, K20R, E35D, M36I, N37D, R41K, R57K, H69K, L89M	A
		RG415w21		None		K14R, L19I, K20R, E35D, M36I, N37D, R41K, R57K, H69K, L89M, F99X	A
Kijak (2004)	3163MN	02CM.3163	AY371160	None		L10V, I15V, K20R, E35D, M36I, N37H, R41K, I62V, L63V, K70Q, I72T, L89M	A
	1404MV	01CM.1404	AY371164	None		I15V, K20R, E35D, M36I, R41K, R57K, H69Q, L89M	A
Konings (2004)	KF_Pat31	00CM2445	AY359713	None		K20R, E35N, M36I, N37D, R41K, H69K, L89M	A
	KF_Pat33	00CM3454	AY359715	None		L10I, I13V, K20R, E35D, M36I, N37D, R41K, H69K, K70R, L89M	A
	KF_Pat34	00CM3476	AY359716	None		I13V, K20R, E35D, M36I, N37D, R41K, H69K, I72L, L89M, I93M	A
	KF_Pat35	00CM2663	AY359717	None		I13V, K20R, E35N, M36I, N37D, R41K, H69K, L89M	A
Servais (2004)	SJ_Pat15	SJKLM019	AJ412946	None		I13V, Q18E, K20R, E35D, M36I, R41K, K45R, R57K, H69K, I72IM, L89M	A
	SJ_Pat26	SJKLM023	AJ412949	None		I13V, K20R, E35D, M36I, R41K, R57K, I62IT, H69K, L89M	A
	SJ_Pat38	SJKLM029	AJ412955	None		I13L, K20R, E35D, M36I, R41K, R57K, H69Q, L89M	A
	SJ_Pat41	SJKLM047	AJ412967	None		L10LV, I13V, I15IV, G16GE, K20R, E35D, M36I, R41K, R57K, H69K, I72IM, L89M	A
Snoeck (2004)	BE39	BE39	AY900742	None		L10V, I13V, G16E, K20R, E35D, M36I, R41K, L63AV, H69K, L89M	A
	BE65	BE65	AY900952	None		I13V, K20R, E35D, M36I, R41K, H69K, L89M	A
Yang (2004)	98KE335	98KE335	AY492763	None		I13V, K20R, E35D, M36I, R41K, R57K, H69K, L89M	A
	00KE553	00KE553	AY492773	None		I13V, K14R, K20R, E35D, M36I, N37D, R41K, R57K, H69K, I72V, L89M	A
Arroyo (2005)	CO9	CO9	AY734563	None		T12S, I13V, I15V, K20R, M36I, R41K, L63T, C67Y, H69K, L89M, I93L	A
Grossman (2005)	23011	23011PR292		None		K14R, K20R, E35D, M36I, N37D, R41K, H69K, L89M, I93L	A
Holguin (2005)	00052395	02_52395	AY248329	None		I13V, K14R, G16E, K20R, E35D, M36I, P39S, R41K, Y59S, C67S, H69K, L89M	A
K'Aluoch (2005)	OK_TC022204	TC022204	DQ079832	None		I13V, G17R, K20R, E35D, M36I, R41K, R57K, H69K, L89M	A
	OK_TC008903	TC008903	DQ079848	None		I13V, K14R, I15V, K20R, E35D, M36I, R41K, R57K, H69K, L89M	A
Non-B Workgroup (2005)	UK1561	UK1561	AY900680	None		K14R, Q18QH, K20R, E35D, M36I, N37D, R41K, R57K, H69K, L89M	A
	UK4327	UK4327	AY901218	None		I13V, K20R, E35D, M36I, R41K, H69K, L89M	A
	TK1007	TK1007		None		I13V, K20R, M36I, R41K, H69K, L89M	A
		TK1007a		None		I13V, K20R, M36I, R41K, H69K, L89M	A
	TK1023	TK1023		None		L10LI, I13V, K14R, K20R, E21ED, E35D, M36I, N37D, R41K, R57K, I62V, H69K, T74S, L89M	A
	PL45175	80399		None		L10I, I13V, K14KR, G16E, K20R, E35D, M36I, R41K, R57K, L63S, H69K, K70R, L89M	A
Punzi (2005)	CAR-38	CAR-38	AY626952	None		I13V, K14R, I15V, K20R, E35D, M36I, N37D, R41K, K45R, R57K, E65D, H69K, L89M	A
Saad (2005)	SM_02YE512	02YE512	AY790008	None		I13V, K20R, E35D, M36I, N37K, R41I, G49R, R57K, L63P, H69K, K70R, I72V, L89M	A
Tee (2005)	03MYKL1590	03_1590	AY904561	None		I13V, I15V, K20R, E35D, M36I, N37D, R41K, H69K, L89M	A
Tee (2005)	MYIDUC22	04MYIDUC22	DQ018362	None		K20R, E35D, M36I, R41K, K55KR, H69K, L89M	A
Vazquez de Parga (2005)	SAM2077	SAM2077	EU345821	None		I13V, K14R, K20R, L24F, D25Y, E35D, M36I, L38LW, R41K, H69K, V77I, L89M, I93L	A
Weber (2005)	M92872	M92872	AY677420	None		I13V, K20R, E35D, M36I, R41K, K43R, R57K, L63P, H69K, L89M	A
	M92386	M92386	AY677455	None		L10V, I13V, I15V, G16E, K20R, E35D, M36I, R41K, K45R, R57K, L63T, H69K, L89M	A
	M55405	M55405	AY677461	None		G16E, K20R, E35D, M36I, N37D, R41K, R57K, E65D, H69K, L89M	A
	M98620	M98620	AY714423	None		I13V, K14R, G16E, K20R, E35D, M36I, R41K, R57K, L63LF, H69K, L89M	A
Babic (2006)	DB_SI6645-00	SI6645-00	AJ971272	None		I13V, K20R, E35D, M36I, R57K, L63T, H69K, L89M	A
Eshleman (2006)	SE687	687-pre	DQ230331	None		I13V, K20R, E35D, M36I, R41K, R57K, H69K, K70R, L89M	A
		687-post	DQ230334	None		I13V, K20R, E35D, M36I, R41K, R57K, H69K, K70R, L89M	A
Jayaraman (2006)	2-01-0169	2-01-0169		None		I13V, G16E, K20R, E35D, M36I, R41K, R57K, H69K, L89M	A
Laurent (2006)	CK22-50	03CM2-50	AM279458	None		I13V, I15V, K20R, E35D, M36I, N37D, R41K, H69K, L89M	A
Marechal (2006)	JF_049	JF_049	DQ443658	None		T12P, I13V, K20R, E35D, M36I, R41K, K45R, L63P, C67Y, H69K, L89M	A
Razafindratsimandresy (2006)	RR_MAD-RF272	MAD-RF272	DQ345021	None		L10LV, K14KR, K20R, E35D, M36I, R41K, R57K, H69K, L89M	A
Saad (2006)	MDS_01UAPol300	01UAPol300	DQ055256	None		I13V, K14R, K20R, E35D, M36I, R41K, G49E, H69K, L89M, I93L	A
	MDS_02UACR005	02UACR005	DQ055268	None		K20R, E35D, M36I, N37D, R41K, H69K, L89M, I93L	A
	MDS_02UAKV156	02UAKV156	DQ055302	None		I13V, K14R, K20R, E35D, M36I, N37D, R41K, H69K, L89M, I93L	A
Vidal (2006)	NV_KSFE110	02.KSFE110	AM041005	None		I13V, G16E, K20R, E35D, M36I, P39S, R41K, D60E, I62V, L63A, H69K, L89M	A
	NV_KSS004	02.KSS004	AM041045	None		I13V, G16E, K20R, E35D, M36I, R41K, L63A, I64V, H69K, T91V, I93L	A
Zarandia (2006)	MZ_03GEMZ017	03GEMZ017	DQ205276	None	I47IM	I13V, K20R, E35D, M36I, N37D, R41K, R57K, H69K, L89M	A
Baker (2007)	9240KR	03-9240KR	AY803468	None		K14KR, G16E, K20R, M36I, R41K, R57K, H69K	A
	0535KH	04-0535KH	AY803480	None		T12A, K20R, E35D, M36I, R41K, H69K, L89M	A
	TC0262	TC026204	AY803488	None		I13V, G16E, K20R, M36I, P39S, R41K, H69K, L89M	A
	P0060	P0060-070305	EF186138	None		I13V, K20R, E35D, M36I, N37D, R41K, K45R, H69K, L89M	A
	A1023	MBA1023-180805	EF186205	None		I13V, G16E, K20R, E35D, M36I, R41K, I62IV, L63CR, H69K, L89M	A
	A1028	MBA1028-230805	EF186207	None		I13V, I15V, K20R, E35D, M36I, P39T, R41K, I62V, H69K, L89M	A
Brumme (2007)	1783	PRRT_1783	EF369093	None		I13V, G16E, K20R, E35D, M36I, R41RK, R57K, H69K, I72IV, L89M	A
Church (2007)	427-125290E	427	EF612025	None		L10LIV, I13V, G16E, K20R, E35D, M36I, R41K, R57K, H69K, K70R, I72IV, L89M	A
	487-126068K	487	EF612043	None		I13V, K20R, E35D, M36I, R41K, R57K, E65D, H69K, L89M	A
	584-131489e	584	EF612075	None		I13V, K20R, E35D, M36I, R41K, R57K, H69K, L89M	A
	592-129775v	592	EF612077	None		L10LV, T12TA, I13V, I15IV, K20R, E35D, M36I, R41RK, R57RK, H69K, K70KR, L89M	A
	667-136472S	667	EF612100	None		I13IV, K20R, E35D, M36I, R41K, R57K, H69K, L89M	A
	701-138581J	701	EF612114	None		I13V, K20R, E35D, M36I, R41K, R57K, H69K, L89IM	A
	801-143188S	801	EF612150	None		I13V, K14KR, G17E, K20R, E35D, M36I, R41K, K45R, R57K, H69K, K70KR, L89M	A
	807-141911f	807	EF612155	None		I13V, K14R, G17GE, K20R, E35D, M36I, R41K, R57K, H69K, L89M	A
	839-146276F	839	EF612164	None		I13V, K14R, I15V, K20R, E35D, M36I, N37D, L63H, H69K, K70E, L89M	A
	877-147575W	877	EF612179	None		I13V, K14R, G16E, K20R, E35D, M36I, P39PS, R41K, H69K, L89M	A
Dilernia (2007)	F038	F038	EF120099	None		I13V, G16E, K20R, E35D, M36I, N37D, R41K, L63A, G68GE, H69KR, L89M, T91V, I93L	A
Galluzzo (2007)	22180	RW_22180	JQ220029	None		L10I, I13V, I15V, K20R, E35D, M36I, R41K, R57K, H69K, L89M	A
Han (2007)	LN17	01CNLN17	EF122586	None		I13V, K20R, E35D, M36I, R41K, H69K, N88K	A
Kassu (2007)	ETH-G-079	G-079	AB285785	None		K20R, E35D, M36I, R41K, R57K, H69K, L89M	A
Li (2007)	PS1044	1044_d177	DQ676873	None		L10I, I13V, K14R, G16E, K20R, E35D, M36I, N37D, P39PS, R41K, K45R, R57K, L63S, H69K, K70R, L89M	A
Razafindratsimandresy (2007)	14	14HIV-SEY	EF143506	None	L33F	I13V, G16GE, K20R, M36I, R41K, R57K, H69K, K70R, L89M	A
Sanders-Buell (2007)	AF094	05AF094	EF158040	None		I13V, K20R, E35D, M36I, R41K, R57K, H69K, L89M	A
	AF095	05AF095	EF158041	None		I13V, L19Q, K20R, E35D, M36I, R41K, R57K, H69K, L89M, I93L	A
	AF104	05AF104	EF158042	None		I13V, L19Q, K20R, E35D, M36I, R41K, R57K, H69K, K70R, L89M	A
Vicenti (2007)	5513	74574R	EF376557	None		I13V, I15V, K20R, E35D, M36I, N37D, R41K, H69K, L89M	A
von Wyl (2007)	76	5808752	EF449852	None		I13V, G16E, K20R, E35D, M36I, R41K, L63V, G68E, H69K, K70R, L89M, T91V, I93L	A
Chang (2008)	TW3452a	TW3452a		None		L10I, I13V, K14R, G16E, K20R, E35D, M36I, R41K, L63V, H69K, L89M	A
Church (2008)	341741Y	341741Y	EU380723	None		I13V, K20R, E35D, M36I, R41K, R57K, H69K, L89M	A
	377986-M	377986-M	EU380741	None		I13V, G16E, K20R, E35D, M36I, P39S, R41K, K45R, R57K, L63Q, H69K, L89M	A
	394901B	394901B	EU380749	None		I13V, K20R, E35D, M36I, K43Q, R57K, H69K, L89M	A
	400196E	400196E	EU380751	None		I13V, K14R, K20R, E35D, M36I, N37D, R41K, H69K, L89M	A
	409924L	409924L	EU380755	None		I13V, K20R, E35D, M36I, R41K, K45R, R57K, L63P, H69K, K70R, L89M	A
	413433L	413433L	EU380757	None		K20R, E35D, M36I, N37E, R41K, R57K, I62V, I64M, H69K, L89M	A
	458569M	458569M	EU380763	None		T12S, K14R, L19Q, K20R, E35D, M36I, N37D, R41K, I64V, H69Y	A
	476384H	476384H	EU380767	None		I13V, K20R, E35D, M36I, R41K, H69K, L89M	A
Derache (2008)	BKO-985	BKO-985	EU330701	None		I13V, K14R, G16E, K20R, E35D, M36I, R41K, H69K, L89M	A
Holguin (2008)	SP41-377614	SP41-377614	EU255526	None		I13V, K14R, G16E, K20R, E35D, M36I, N37D, R41K, R57K, H69K, L89M	A
	SP3-290207	SP3-290207	EU342787	None		L10V, I13V, K20R, M36I, N37S, R41K, H69K, L89M	A
Ibe (2008)	169	169	AB356216	None		L10V, I13V, K20R, E35D, M36I, R41K, R57K, L63V, H69K, L89M	A
	276	276	AB356290	None		I13V, K14R, K20R, E35D, M36I, R41K, R57K, H69K, L89M	A
	298	298	AB356304	None		L10I, I13V, G16E, K20R, E35D, M36I, N37D, R41K, R57K, K70R, I72T, L89M	A
Land (2008)	ML1990	ML1990	EU110092	None		L10I, I13V, K14R, K20R, E35D, M36I, N37D, R41K, R57K, D60E, C67Y, H69K, L89M	A
Ndembi (2008)	IAEAM012	IAEAM012	EU306751	None		L10V, I13V, K20R, E35D, M36I, R41K, R57K, D60E, C67Y, H69K, L89M	A
	IAEM017	IAEM017	EU306755	None		I13V, K20R, E35D, M36I, N37D, R41K, K45R, R57K, H69K, L89M	A
	IAEAM019	IAEAM019	EU306756	None		I13V, K20R, E35D, M36I, N37D, R41K, K45R, R57K, H69K, L89M	A
	IAEM054	IAEM054	EU306778	None		I13V, K20R, E35D, M36I, R41K, R57K, L63P, H69K, L89M	A
	IAEM064	IAEM064	EU306783	None		I13V, K20R, M36I, R41K, H69K, L89M	A
Nyombi (2008)	TBK004	TBK004	EU251717	None		I13V, K20R, E35D, M36I, R41K, K45R, R57K, H69K, L89M	A
	TBK011	TBK011	EU251722	None		I13V, K14R, I15V, K20R, E35D, M36I, N37D, R41K, K43R, R57K, L63P, H69K, L89M	A
	TBK048	TBK048	EU251743	None		I13V, K20R, E35D, M36I, R41K, R57K, H69R, I72V, L89M	A
	TBK101	TBK101	EU251781	None		I13V, K14R, G17E, Q18H, K20R, M36I, N37S, L63T, E65H, H69K, L89M	A
	TMS006	TMS006	EU251787	None		I13V, K14T, L19V, K20R, E35D, M36I, R41RK, R57K, L63T, H69K, I72T, L89M	A
	TMS129	TMS129	EU251827	None		K20R, E35D, M36I, R41K, K45R, R57K, L63P, H69Q, V77I, L89M, I93L	A
	TMS147	TMS147	EU251836	None		L10V, I13V, K14R, G16E, K20R, E35D, M36I, R41K, R57K, H69K, L89M	A
	TMS314	TMS314	EU251862	None		T4TA, I13V, K20R, E35D, M36I, P39PQ, R41K, K45R, R57K, L63P, H69K, L89M	A
	TMS320	TMS320	EU251866	None		I13V, K20R, E35D, M36I, R41K, R57K, H69K, L89M	A
Palacios (2008)	12872	12872		None		I13V, K20R, E35D, M36I, N37D, R41K, L63P, H69IK, L89M	A
Somi (2008)	OY-05-092	OY-05-092	JQ616965	None		I13V, K20R, E35D, M36I, R41K, R57RK, H69K, L89M	A
	OY-05-514	OY-05-514	JQ616978	None		I13V, K20R, E35D, M36I, R41K, R57K, L63T, H69K, K70KR, L89M	A
Aghokeng (2009)	CYV085	CYV085	GU191582	None		L10M, I13V, G16E, K20R, E35D, M36I, R57K, L63T, H69K, L89M	A
Avi (2009)	U40	U40	FJ154009	None		I13V, K14R, G16E, K20R, E35D, M36I, R41K, K43R, L63V, H69K, L89M, I93L	A
Bartolo (2009)	HAB81	01AOHAB81	EU068215	None		G16E, K20R, E35D, M36I, R41K, H69K, K70R, L89M	A
	HDC235	01AOHDC235	EU068227	None		L10V, I13V, K20R, E35D, M36I, R41K, H69K, L89M	A
Brown (2009)	CAS_108_1_7868	CAS_108_1_7868	FJ030651	None		L10I, I13V, G16E, K20R, E35D, M36I, R41K, K45R, R57K, L63T, H69K, A71T, I72IT, L89M, I93L	A
Brumme (2009)	Y0506	Y0506	GQ372271	None		I13V, I15V, K20R, E35D, M36I, N37D, R41K, R57K, H69K, L89M	A
Cuevas (2009)	X2711_1	X2711_1	GU326181	None		K14R, G16E, K20R, E35D, M36I, R41K, K45R, R57K, L63A, H69K, L89M, I93L	A
Cuevas (2009)	P1003	P1003.1	EU822541	None		I13V, G16E, L19Q, K20R, E35D, M36I, R41K, L63V, H69K, L89M, T91V, I93L	A
Eshleman (2009)	E04982W3	07-156934	FJ389070	None		I13V, K14KR, K20R, E35D, M36I, R41K, R57K, H69K, L89M	A
	J30993R9	07-156967	FJ389080	None		I13V, G16E, K20R, E35D, M36I, P39S, R41K, K43R, K45R, R57K, L63S, H69K, L89M	A
	K22917W3	07-157001	FJ389103	None		L10I, I13V, G16E, K20R, E35D, M36I, P39PS, R41K, R57K, H69Q, L89M	A
	D27275W2	08-102864	FJ389146	None		I13V, K14R, K20R, E35D, M36I, R41K, R57K, H69K, L89M	A
Hawkins (2009)	R40	ZZR40	FJ931279	None		L10V, I13V, K14R, G16E, K20R, E35D, M36I, R41K, H69K, L89M	A
	Q956	ZZQ956	FJ931325	None		I13V, I15IV, K20R, E35D, M36I, N37D, R41K, D60E, H69K, V77I, L89M	A
	R438	ZZR438	FJ931452	None		I13V, K20R, E35D, M36I, R41K, H69K, L89M	A
Hosseinipour (2009)	9449	9449	GQ228274	None		I15V, Q18L, L19T, K20R, E35D, M36I, N37D, R41K, H69K, A71T, I93L	A
Kousiappa (2009)	CY111	CY111	EU673394	None		L10I, T12P, I13V, G16E, L19V, K20R, E35D, M36I, R41K, L63V, H69Q, L89M, I93M	A
	CY112	CY112	EU673395	None		L10I, I13V, K14N, G16E, L19V, K20R, E35D, M36I, R41K, L63V, H69Q, L89M, Q92QH, I93M	A
	CY153	CY153	EU673397	None		I13V, K14E, I15V, K20R, E35D, M36I, K45R, R57K, L63P, H69K, L89M, C95CW	A
Koyalta (2009)	67	TCHAD-67	FJ688198	None		I13V, K20R, E35D, M36I, R41K, H69K, L89M	A
Soheilli (2009)	IR02	IR02	FJ392730	None		I13V, L19Q, K20R, E35D, M36I, R41K, R57K, H69K, L89M	A
	IR03	IR03	FJ392731	None		I13V, L19Q, K20R, E35D, M36I, R41K, R57K, D60DE, I62IV, L63LV, E65ED, C67CY, H69K, V75VI, L89M	A
	IR13	IR13	FJ392738	None		I13V, K14R, L19Q, K20R, E35D, M36I, R41K, R57K, H69K, L89M	A
	IR15	IR15	FJ392740	None		I13V, L19Q, K20R, E35D, M36I, R41K, R57K, H69K, L89M	A
	IR16	IR16	FJ392741	None		I13V, L19Q, K20R, E35D, M36I, R41K, R57K, H69K, L89M	A
	IR09	IR09	FJ392734	None		I13V, L19Q, K20R, E35D, M36I, R41K, R57K, C67Y, H69K, L89M	A
	IR12	IR12	FJ392737	None		I13V, L19Q, K20R, E35D, M36I, R41K, R57K, H69K, L89M	A
Steegen (2009)	BV116	BV116-1	EU872123	None		L10V, I13V, I15V, K20R, E35D, M36T, N37D, R41K, R57K, D60E, H69K, L89M	A
	BV123	BV123-1	EU872124	None		I13V, I15V, K20R, E35D, M36I, R41K, R57K, H69K, L89M	A
	BV245	BV245-1	EU872132	None		I13V, K20R, E35D, M36I, N37D, K45R, R57K, L63T, H69K, L89M	A
Thomson (2009)	915_1011	RU_915_1011	FJ009723	None		I13V, K14R, K20R, E35D, M36I, N37D, R41K, H69K, L89M, I93L	A
	915_1015	ru_915_1015	FJ009727	None		K14R, K20R, E35D, M36I, R41K, H69K, L89M, I93L	A
	915_1042	RU_915_1042	FJ009738	None		I13V, L19V, K20R, M36I, R41K, H69K, L89M	A
	915_1043	RU_915_1043	FJ009739	None		I13V, K14R, K20R, E35D, M36I, N37D, R41K, H69K, L89M, I93L	A
	915_1053	RU_915_1053	FJ009748	None		I13V, K20R, M36I, N37D, R41K, C67F, H69K, L89M, I93L	A
	SP_B_023	RU_SP_B_023	FJ009789	None		I13V, K14R, K20R, E35D, M36I, R41K, H69K, L89M, I93L	A
Vercauteren (2009)	pt2059	930282707	GQ398965	None		L10I, I13V, K20R, E35D, M36I, N37D, R41K, R57K, D60E, C67E, H69K, L89M	A
	pt1866	2066148701	GQ399158	None		L10LV, I13V, K14KR, I15IV, G16GE, L19LI, K20R, E35D, M36I, P39PT, R41RK, K45R, R57K, L63AT, H69K, K70KR, L89M	A
	pt1759	2825916426	GQ399265	None		Q7QE, I13V, K14R, I15V, K20R, E35D, M36I, N37D, R57K, L63A, H69K, K70R, L89M	A
	pt1676	3269540619	GQ399348	None		L10LI, I13V, K14R, I15IV, G16E, K20R, E35D, M36I, N37D, R41K, K45R, R57K, L63AS, H69K, K70R, L89M	A
	pt1488	4351682173	GQ399536	None		I13V, K20R, E35D, M36I, R41K, K45R, R57K, H69K, L89M	A
	pt1440	4619944919	GQ399584	None		I13V, L19I, K20R, E35D, M36I, R41K, K45R, R57K, L63A, H69K, L89M	A
	pt1412	4784320538	GQ399612	None		L10LM, I13V, I15IL, K20R, E35D, M36I, R41K, K45R, R57K, L63A, H69K, L89M	A
	pt1398	4877237992	GQ399626	None		T12P, I13V, K14R, K20R, E35D, M36I, R41K, K45R, R57K, L63P, C67Y, H69K, L89M	A
	pt1332	5234413600	GQ399692	None		I13V, K20R, E35D, M36I, R41K, K45R, R57K, L63A, H69K, L89M, I93L	A
	pt1106	6564519905	GQ399918	None		L10I, I13V, K14R, G16E, K20R, E35D, M36I, N37D, R41K, K45R, R57K, L63A, H69K, K70R, L89M	A
	pt1079	6728939912	GQ399945	None		I13V, K14R, I15V, K20R, E35D, M36I, N37D, R41K, R57K, H69K, L89M	A
	pt981	7370878818	GQ400043	None		T12P, I13V, K14R, K20R, E35D, M36I, R41K, K45R, R57K, L63P, C67Y, H69K, L89M	A
	pt925	7705565281	GQ400099	None		K20R, E35D, M36I, N37E, R41K, H69K, L89M	A
	pt877	7940838415	GQ400147	None		I13V, K20R, E35D, M36I, R41K, K45R, R57K, L63A, H69K, L89M, N98NI	A
	pt823	8222982792	GQ400201	None		I13V, K20R, E35D, M36I, R41K, K45R, R57K, H69K, L89M	A
	pt759	8595222384	GQ400265	None		I13V, L19I, K20R, E35D, M36I, R41K, K45R, R57K, L63A, H69K, L89M	A
	pt674	8oxBGvibBI	GQ400350	None		K20R, E35D, M36I, R41K, R57K, L63V, H69K, L89M	A
	pt627	9259608826	GQ400397	None		I13V, K14R, I15V, K20R, E35D, M36I, N37D, R41K, R57K, H69K, L89M	A
	pt623	9269506418	GQ400401	None	V11I	L10V, I13V, K14R, G16E, K20R, E35D, M36I, R41K, H69K, L89M	A
	pt575	9510400631	GQ400449	None		L10I, T12A, I13V, I15K, G16E, K20R, E21D, E35D, M36I, L63A, C67CY, H69K, K70R, V82I, L89M	A
	pt488	9GTa28iwkJ	GQ400536	None		K20R, E35D, M36I, R41K, K45R, R57K, L63P, H69K, L89M	A
	pt476	a74K8Cmi1w	GQ400548	None		G17E, K20R, E35D, M36I, P39PS, R41K, K45R, R57K, L63S, H69K, L89M	A
	pt174	QqqWJfdqMb	GQ400850	None		I13V, K20R, M36I, R41K, H69K, L89M, I93L	A
	pt167	reFzcbds70	GQ400857	None		L10V, I13V, K20R, E35D, M36I, N37D, R41K, R57K, C67Y, H69K, L89M	A
Yebra (2009)	SP71-372939	SP71-372939	EU255373	None		L10V, I13V, G16E, K20R, E35D, M36I, R41K, K45R, R57K, L63T, E65D, H69K, L89M	A
	SP79-377614	SP79-377614	EU545187	None		I13V, K14R, G16E, K20R, E35D, M36I, N37D, R41K, R57K, H69K, L89M	A
Balode (2010)	S2037	S2037	GU945090	None		K14R, K20R, E35D, M36I, N37D, R41K, H69K, L89M, I93L	A
	S2102	S2102	GU945122	None		I13V, K14R, I15V, K20R, E35D, M36I, N37D, R41K, H69K, L89M, I93L	A
	S2106	S2106	GU945125	None		I13V, G16E, K20R, E35D, M36I, R41K, H69K, L89M, I93L	A
	S2275	S2275	GU945159	None		I13V, K20R, E35D, M36I, N37D, R41K, I64M, H69K, L89M, I93L	A
Carr (2010)	4038STN	01CM.4038STN	GU201508	None		I13V, K20R, E35G, M36I, R41K, R57K, L63V, I64M, H69K, L89M	A
Castelbranco (2010)	090052A	090052A	HM357753	None		I13V, G16E, K20R, E35D, M36I, R41K, H69K, L89M	A
Djoko (2010)	676	CD2682	FR666676	None		I13V, K20R, E35ED, M36I, R41K, H69K, L89M	A
Djoko (2010)	GQ346	08GQ346	FN557311	None		I13V, K20R, E35D, M36I, N37D, R41K, H69K, L89M	A
El-Khatib (2010)	Pat120	11ZA_SAVE2391	JF960570	None		I13V, G16E, K20R, M36I, R41K, D60E, L63P, I64V, H69K, I93L	A
Hamers (2010)	300037	CP076300037	HM119631	None		I15V, L19M, K20R, E35D, M36I, R41K, H69K, V82I, L89M	A
Mosha (2010)	S54Pol	S54Pol	JQ071481	None		I13V, I15V, K20R, E35D, M36I, N37D, R41K, R57K, H69K, K70R, L89M	A
	S65Pol	S65Pol	JQ071484	None		I13IV, K14R, G16E, K20R, E35D, M36I, P39S, R41K, R57K, I62V, L63S, H69K, L89M	A
Ndembi (2010)	14006D_P1	14006	GQ409562	None		I13V, K20R, M36I, R41K, R57K, L63P, H69R, L89M	A
	14324D_P1	14324	GQ409567	None		I13V, K20R, M36I, R41K, Q61QH, H69K, L89M	A
	15911D_P1	15911	GQ409580	None		I13V, K20R, E35D, M36I, R41K, R57K, H69K, L89M	A
	16712D_P1	16712	GQ409588	None		L10I, I13V, G16E, K20R, E35D, M36I, R41K, R57K, L63V, H69K, L89M	A
	DT2295_05_P1	2295	GQ409604	None		T12A, I13V, I15V, K20R, M36I, R41K, I62V, L63P, H69K, L89M, I93L	A
	DT3504_05_P1	3504	GQ409618	None		G16E, K20R, E35D, M36I, R41K, L63V, G68E, H69K, K70R, L89M, T91V, I93L	A
	DT3513_05_P1	3513	GQ409619	None		L10I, I13V, K14R, G16E, K20R, E35D, M36I, N37D, R41K, R57K, H69K, L89M	A
	DT4014_05_P1	4014	GQ409629	None		L10V, I13V, G16E, K20R, E35D, M36I, R41K, R57K, H69K, L89M	A
Papathanasopoulos (2010)	17579	07ZA17579	GU253429	None		I13V, K20R, E35D, M36I, R41K, R57K, H69K, L89M	A
Sanders-Buell (2010)	077H	077H	GQ477442	None		I13V, L19Q, K20R, E35D, M36I, R41K, R57K, H69K, L89M	A
	051H	051H	GQ477444	None		I13V, L19Q, K20R, E35D, M36I, R41K, R57K, L63I, H69K, L89M	A
	046H	046H	GQ477447	None		I13V, L19Q, K20R, E35D, M36I, R41K, R57K, I62V, L63I, H69K, L89M	A
	273H	273H	GQ477448	None		I13V, K14N, L19Q, K20R, E35D, M36I, N37T, R41K, R57K, H69K, L89M	A
	221H	221H	GQ477449	None		I13V, L19Q, K20R, E35D, M36I, R41K, R57K, H69K, L89M	A
	007H	007H	GQ477450	None		I13V, L19Q, K20R, E35D, M36I, R41K, R57K, H69K, L89M	A
	027H	027H	GQ477451	None		I13V, L19Q, K20R, E35D, M36I, R41K, R57K, I62V, L63I, H69K, L89M	A
Soares (2010)	CM04_094	CM04_094	GU366134	None		L10V, I13V, K14R, G16E, K20R, E35D, M36I, R41K, K45R, L63A, H69K, L89M	A
	CM04_093	CM04_093	GU366142	None		L10I, I13V, K20R, E35D, M36I, N37D, R41K, L63S, C67S, H69K, L89M	A
Tovanabutra (2010)	KECst_019	KECst_019	FJ623478	None		I13V, K14R, K20R, E35D, M36I, N37D, R41K, R57K, C67Y, H69K, L89M	A
	KECst_005	KECst_005	FJ623481	None		I13V, K14R, K20R, E35D, M36I, N37D, R41K, R57K, H69K, L89M	A
	KECst_022	KECst_022	FJ623484	None		I13V, K14R, K20R, E35D, M36I, N37D, R41K, R57K, H69K, L89M	A
	KECst_004	KECst_004	FJ623489	None		I13V, K20R, E35D, M36I, N37D, R41K, K45R, H69K, L89M	A
	KECst_008	KECst_008	FJ623493	None		I13V, G16E, K20R, E35D, M36F, R41K, Q61N, L63T, G68E, H69K, K70R, L89M, T91V, I93L	A
	KECst_011	KECst_011	FJ623494	None		I13V, G16E, K20R, E35D, M36I, R41K, Q61N, L63T, G68E, H69K, K70R, L89M, T91V, I93L	A
Towler (2010)	1	320024-A	HM037810	None		T12S, I13V, K20R, E35D, M36I, R41K, K45R, R57K, L63A, H69K, L89M	A
		393250-S	HM037884	None		L10V, I13V, K20R, E35D, M36I, R41K, K45R, R57K, L63A, H69K, L89M	A
	338325-D	338325-D	HM037817	None		I13V, K20R, L33V, M36I, R41K, L63LP, H69K, K70KR, L89M	A
	9	341569-X	HM037819	None		I13V, K20R, E35D, M36I, R41K, R57K, H69K, L89M	A
		425113-S	HM037888	None		I13V, K20R, E35D, M36I, R41K, R57K, H69K, L89M	A
		509635-D	HM037900	None		I13V, K20R, E35D, M36I, R41K, R57K, H69K, L89M	A
	348121-H	348121-H	HM037821	None		I13V, K20R, E35D, M36I, R41K, R57K, H69K, K70KR, L89M	A
	335391-Z	335391-Z	HM037850	None		I13V, K20R, M36I, R41K, R57K, L63P, H69K, K70R, L89M	A
	370903-R	370903-R	HM037862	None		I13V, K14R, K20R, E35D, M36I, R41K, R57K, H69K, L89M	A
	385494-T	385494-T	HM037866	None		K14R, L19T, K20R, E35D, M36I, R41K, R57K, L63T, H69K, L89M	A
	393958-V	393958-V	HM037867	None		I13V, K20R, E35D, M36I, R41K, R57K, H69K, L89M	A
	404615-W	404615-W	HM037870	None		I13V, K20R, E35D, M36I, R41K, K45R, R57K, Q61D, H69K, K70KR, L89M	A
	430253-Z	430253-Z	HM037876	None		I13V, K20R, M36I, R41K, R57K, L63P, H69K, K70R, V82VI, L89M	A
Vinogradova (2010)	Dag59	Dag59	GQ867603	None		K14R, K20R, E35D, M36I, N37D, R41K, H69K, L89M, I93L	A
Yebra (2010)	303027	06SP0303027	FJ481650	None		Q2QR, I13V, K14R, G16E, K20R, E35D, M36I, P39S, R41K, G68GE, H69K, L89LM, T91TP	A
Aghokeng (2011)	HJ1866	HJ1866	JN639451	None		L10LI, I13V, K14KR, I15V, K20R, E35D, M36I, N37D, R41K, H69K, L89M	A
Avi (2011)	088u	088u	GQ926651	None		K20R, E35D, M36I, R41K, H69K, L89M, I93L	A
	138u	138u	GQ926684	None		K14R, G16E, K20R, E35D, M36I, R41K, H69K, L89M, I93L	A
Charpentier (2011)	23	CP 001 2052		None	V11I	L10I, I13V, K20R, M36I, L63T, I64L, H69K, L89M	A
	121	CP 001 724		None		I15IV, K20R, E35D, M36I, N37D, R41K, R57K, Y59YH, L63A, H69K, K70R, L89M	A
El Annaz (2011)	12087	12087	HQ393311	None		I13V, K20R, E35D, M36I, N37D, P39Q, R41K, L63P, H69K, I72V, L89M, T91N	A
	15737	15737	HQ393321	None		T12S, I13V, K14I, I15V, L19Q, K20R, E34EG, M36I, N37NHRS, L63T, H69K, T74S, L89M, I93L	A
Fokam (2011)	CIRCB-8845	CIRCB-8845	JQ796105	None		L10LI, I13V, K20R, E35D, M36I, N37D, R41K, R57RK, L63LP, H69K, I72IV, L89M	A
	CIRCB-11004	CIRCB-11004	JQ796132	None		K20R, E35D, M36I, N37ND, R41K, H69K, L89M	A
Hamers (2011)	CP076301532	CP076301532	HQ993576	None		K14R, K20R, E35D, M36I, N37E, R41K, R57K, H69K, L89M	A
	CP076301541	CP076301541	HQ993584	None		I15V, K20R, E35D, M36I, R41K, R57K, I62V, L63V, I64M, H69K, L89M	A
	CP076301543	CP076301543	HQ993586	None		I13V, I15V, K20R, E35D, M36I, R41K, I62V, L63V, H69K, T74S, L89M	A
	CP076301546	CP076301546	HQ993589	None		I13V, K20R, E35D, M36I, N37D, R41K, R57K, H69K, L89M	A
	CP076301567	CP076301567	HQ993608	None		I13V, G16GE, K20R, E35N, M36I, N37D, R41K, K45R, L63V, H69K, L89M	A
	CP076301573	CP076301573	HQ993613	None		L10V, I13V, K20R, E35D, M36I, N37D, R41K, R57K, D60E, Q61E, I62V, E65D, H69K, L89M	A
	CP076301584	CP076301584	HQ993622	None		I13V, K14R, G17E, Q18H, K20R, E35D, M36I, R41K, L63LIPT, H69K, L89M	A
	CP076301587	CP076301587	HQ993625	None		L10V, I13V, K20R, E35D, M36I, N37D, R41K, H69K, L89M	A
	CP076301588	CP076301588	HQ993626	None		T12TP, I13V, G16A, K20R, E35D, M36I, R41K, L63V, G68E, H69K, L89M, T91V, I93L	A
	CP076301609	CP076301609	HQ993646	None		I13V, G16E, K20R, E35D, M36I, R41K, Q61N, L63S, G68E, H69K, K70R, L89IM, T91V, I93L	A
	CP076301611	CP076301611	HQ993648	None		G16E, K20R, E35D, M36I, N37D, R41RK, Q61QH, L63V, G68E, H69K, K70R, L89M, T91V, I93L	A
	CP076301616	CP076301616	HQ993652	None		L10I, I13V, K20R, E35D, M36I, N37D, R41K, R57K, H69K, L89M	A
	CP076301621	CP076301621	HQ993657	None		I13V, K20R, E35D, M36I, R41K, R57K, H69K, L89M	A
	CP076301666	CP076301666	HQ993667	None		L10I, K20R, E35D, M36I, R41K, R57K, I62IV, L63T, E65D, H69K, L89M	A
	CP076301671	CP076301671	HQ993670	None		T12P, I13V, G16E, K20R, E35D, M36I, R41K, D60E, L63T, G68E, H69K, K70R, L89M, T91V, I93L	A
	CP076301676	CP076301676	HQ993672	None		I13V, K20R, E35D, M36I, N37D, R41K, K45R, R57RK, I62IV, H69K, T74S, L89M	A
	CP076301681	CP076301681	HQ993677	None		I13V, K14R, G16E, K20R, E35D, M36I, R41K, R57K, Q61H, L63V, G68E, H69K, K70R, L89I, T91V, I93L	A
	CP076301690	CP076301690	HQ993686	None		L10V, I13V, K20R, E35D, M36I, N37D, R41K, R57K, H69K, L89M	A
	CP076301692	CP076301692	HQ993688	None		I13V, I15V, K20R, E35D, M36I, N37D, R41K, R57K, L63LIRS, H69K, L89M	A
	CP076301698	CP076301698	HQ993693	None		K20R, E35D, M36I, N37D, R41K, R57K, H69K, L89M	A
	CP076301699	CP076301699	HQ993694	None		I13V, G16E, K20R, E35D, M36I, R41K, L63V, G68E, H69K, L89M, T91V, I93L	A
	CP076301705	CP076301705	HQ993700	None		L10I, I13V, Q18QE, K20R, E35D, M36I, R41K, R57K, L63V, H69K, L89M	A
	CP076301706	CP076301706	HQ993701	None		L10X, I13V, K20R, E35D, M36I, R41K, R57K, H69K, L89M	A
	CP076301711	CP076301711	HQ993706	None		I13V, K20R, E35D, M36I, N37D, R41K, K45R, R57K, H69K, L89M	A
	CP076301723	CP076301723	HQ993716	None		I13V, K14R, K20R, E35D, M36I, R41K, K45R, R57K, L63LFPS, H69K, I72V, L89M	A
	CP076301724	CP076301724	HQ993717	None		I13V, K20R, M36I, R41K, R57K, H69K, L89I	A
	CP076301728	CP076301728	HQ993721	None		L5X, T12X, I13V, K14R, I15V, G16E, K20R, E35D, M36I, R41K, K45R, R57K, L63T, H69K, L89M	A
	CP076301733	CP076301733	HQ993723	None		K20R, E35D, M36I, N37D, R41K, R57K, D60E, I62V, L63P, I64L, H69K, L89M	A
	CP076301734	CP076301734	HQ993724	None		I13V, G16E, K20R, E35D, M36I, R41K, L63N, H69K, K70R, L89M	A
	CP076301740	CP076301740	HQ993730	None		I13V, K14R, K20R, E35D, M36I, N37D, R41K, R57K, I62V, I64L, H69K, L89M	A
	CP076301741	CP076301741	HQ993731	None		I13V, I15V, K20R, E35D, M36I, N37D, R41K, R57K, L63M, H69K, L89M	A
	CP076301742	CP076301742	HQ993732	None		I15IV, G16E, K20R, E35D, M36I, R41K, R57K, L63V, H69K, L89M, I93L	A
	CP076301746	CP076301746	HQ993736	None		I13V, G16E, K20R, E35D, M36I, R41K, L63N, H69K, K70R, I72IT, L89LM, T91V	A
	CP076301758	CP076301758	HQ993747	None		L10I, T12A, I13V, K20R, M36I, R41K, R57K, H69KQ, T74TS, L89M	A
	CP076301760	CP076301760	HQ993748	None		I13V, G16E, K20R, E35D, M36I, R41K, L63T, G68E, H69K, K70R, V82I, L89M, T91V, I93L	A
	CP076302218	CP076302218	HQ993765	None		I13V, K20R, E35D, M36I, R41K, R57K, H69K, L89M	A
	CP076302262	CP076302262	HQ993769	None		L10I, I13V, K20R, E35D, M36I, R41H, R57K, I62V, L63V, I64L, H69K, T74S, L89M	A
	CP076302271	CP076302271	HQ993771	None		I13V, I15V, K20R, E35D, M36I, N37D, R41K, R57K, H69K, L89M	A
	CP076302272	CP076302272	HQ993772	None		I13V, K14R, I15V, K20R, E35D, M36I, N37D, R41K, K43R, R57RK, L63AT, H69K, L89M	A
	CP076302281	CP076302281	HQ993775	None		L10I, K20R, E35D, M36I, R41K, R57K, I62IV, L63T, E65D, H69K, L89M	A
	CP076301627	CP076301627	HQ993776	None		L10I, T12S, I13V, K14R, K20R, E35D, M36I, R41K, R57K, H69K, L89M	A
	CP076301631	CP076301631	HQ993780	None		L10V, I13V, I15V, K20R, E35D, M36I, N37D, R41K, R57K, I62V, L63V, I64M, E65D, H69K, L89M	A
	CP076301639	CP076301639	HQ993785	None	V11VI	L10V, I13V, K14KR, G16E, K20R, E35D, M36I, P39PQ, R41K, R57K, H69K, L89M	A
	CP076301640	CP076301640	HQ993786	None		L10LV, I13V, K14KR, G16GE, K20R, E35D, M36I, R41K, R57RK, L63LV, H69K, L89M	A
	CP076301649	CP076301649	HQ993792	None		I13IV, K14KR, I15IV, K20R, E35D, M36I, N37D, R41K, R57K, D60E, I62V, H69K, L89M	A
	CP076301654	CP076301654	HQ993797	None		I13V, I15V, G16E, K20R, E35D, M36I, N37D, R41K, L63V, G68E, H69K, K70R, L89M, T91V, I93L	A
	CP076301674	CP076301674	HQ993802	None		I13V, K14R, G16E, K20R, E35D, M36I, R41K, L63T, G68E, H69K, L89M, T91V, I93L	A
	CP076302190	CP076302190	HQ993804	None		K20R, E35D, M36I, N37D, R41K, R57K, I62IV, E65ED, H69K, T74TS, L89M	A
	CP076302192	CP076302192	HQ993805	None		I13V, I15V, K20R, E35D, M36I, R41K, R57K, H69K, L89M	A
	CP076302239	CP076302239	HQ993815	None		L10V, I13V, K20R, L33V, E35D, M36I, R41K, R57K, L63C, H69K, L89M	A
	CP076302246	CP076302246	HQ993818	None		L10V, I13V, K14R, G16E, K20R, E35D, M36I, R41K, R57K, H69K, L89M	A
	CP076302249	CP076302249	HQ993820	None		I13V, K14R, I15IV, K20R, E35D, M36I, N37D, R41K, R57K, H69K, L89M	A
	CP076302270	CP076302270	HQ993830	None		L10IV, I13V, K14R, G17E, Q18H, K20R, E35D, M36I, N37E, R41K, K45R, R57K, L63LP, H69K, K70R, L89M	A
	CP076302289	CP076302289	HQ993838	None		T12TA, K14KR, I15V, K20R, M36I, R41K, R57K, L63V, H69K, K70R, L89M	A
	CP076302291	CP076302291	HQ993840	None		K20R, E35D, M36I, N37D, R41K, R57K, D60E, I62V, H69K, L89M	A
	CP076302293	CP076302293	HQ993841	None		K20R, E35D, M36I, N37D, R41K, R57RK, Q61QH, H69K, L89M	A
	CP076302320	CP076302320	HQ993862	None		K14R, K20R, E35D, M36I, N37D, R41K, R57K, H69K, L89M	A
	CP076302324	CP076302324	HQ993865	None		I13V, I15IV, K20R, E35D, M36I, N37E, R41K, R57K, H69K, L89M	A
	CP076302325	CP076302325	HQ993866	None		I13V, I15V, K20R, E35D, M36I, N37D, R41K, R57K, D60E, H69K, L89M	A
	CP076302333	CP076302333	HQ993873	None		I13V, G16E, K20R, E35D, M36I, R41K, L63S, H69K, L89M, T91V, I93L	A
	CP076304142	CP076304142	HQ993878	None		K20R, E35D, M36I, N37D, R41K, R57K, L63C, H69K, L89M	A
	CP076304157	CP076304157	HQ993882	None		I13V, K14R, K20R, E35D, M36I, N37D, R41K, R57K, H69K, L89M	A
	CP076304172	CP076304172	HQ993888	None		I13V, K14KR, G17E, K20R, E35D, M36I, N37D, R41K, K43KR, R57RK, L63LV, H69K, K70KR, L89M	A
	CP076304173	CP076304173	HQ993889	None		K14R, K20R, E35D, M36I, N37D, R41K, R57RK, H69K, L89M	A
	CP076304199	CP076304199	HQ993902	None		I13V, K20R, E35D, M36I, R41K, R57K, H69K, K70KR, I72LM, L89M	A
	CP076304201	CP076304201	HQ993904	None		K20R, E35D, M36I, N37D, R41K, H69K, L89M	A
	CP076304204	CP076304204	HQ993906	None		L10V, I13V, K20R, E35D, M36I, R41K, K45R, R57K, L63S, H69K, L89M	A
	CP076304206	CP076304206	HQ993908	None		L19LIKQ, K20R, E35D, M36I, N37D, R41K, R57K, E65D, H69K, L89M	A
	CP076304221	CP076304221	HQ993916	None		I13V, G16E, K20R, E35D, M36I, R41K, I62V, L63V, I64M, H69K, L89M	A
	CP076304239	CP076304239	HQ993932	None	L33I	I13V, K20R, E35D, M36I, R41K, R57K, D60E, Q61E, I62V, L63S, H69K, L89M	A
	CP076304240	CP076304240	HQ993933	None		L10V, K20R, E35D, M36I, N37D, R41K, K43R, R57K, L63V, E65D, H69K, L89M	A
	CP076304245	CP076304245	HQ993936	None		I13V, I15IV, K20R, E35D, M36I, R41K, R57RK, H69K, L89M	A
	CP076304250	CP076304250	HQ993939	None		I13V, K20R, E35D, M36I, N37E, R41K, H69K, L89M	A
	CP076304263	CP076304263	HQ993951	None		L10I, I13V, G16E, K20R, E35D, M36I, R41K, R57K, L63FIST, H69K, L89M	A
	CP076304268	CP076304268	HQ993956	None		K20R, E35D, M36I, R41K, R57K, H69K, L89M	A
	CP076304271	CP076304271	HQ993959	None		I13V, K14R, I15V, K20R, E35D, M36I, N37D, R41K, K45R, R57K, H69K, L89M	A
	CP076304335	CP076304335	HQ993968	None		I13V, I15V, K20R, E35D, M36I, N37D, R41K, K43R, R57K, H69K, L89M	A
	CP076304402	CP076304402	HQ993972	None		I13V, K14R, I15V, K20R, E35D, M36I, N37D, R41K, R57K, L63P, H69K	A
	CP076300767	CP076300767	HQ994938	None		I13V, I15V, G16E, K20R, M36I, R41K, R57K, L63S, E65ED, H69K, L89I	A
	CP076300804	CP076300804	HQ994942	None		L10LV, I13V, K14R, G16E, K20R, E35D, M36I, R41K, R57K, H69K, L89M	A
	CP076300806	CP076300806	HQ994943	None		I13V, K20R, E35D, M36I, R41K, H69K, L89M	A
	CP076300869	CP076300869	HQ994962	None		L10V, I13V, G16E, K20R, E35D, M36I, R41K, R57K, H69K, K70Q, L89M	A
	CP076301837	CP076301837	HQ994988	None		I13V, K20R, E35D, M36I, R41K, K45R, R57K, L63P, H69K, L89M	A
	CP076301862	CP076301862	HQ994998	None		I13V, K14KR, K20R, E35D, M36I, N37D, R41K, R57K, H69K, L89M	A
	CP076301880	CP076301880	HQ995009	None		K20R, E35D, M36I, R57K, I62V, I64IM, H69K, K70R, L89M	A
	CP076301881	CP076301881	HQ995010	None		T4S, L10LV, I13V, G16E, K20R, E35D, M36I, R41K, R57K, D60E, H69K, L89M	A
	CP076301884	CP076301884	HQ995012	None	L10LF	I13V, K20R, E35D, M36I, R41K, K45R, R57K, H69K, L89M	A
	CP076302048	CP076302048	HQ995020	None		L10V, I13V, G16E, K20R, E35D, M36I, R41K, K45R, R57K, L63T, L89M	A
	CP076302960	CP076302960	HQ995048	None		L10I, I13V, K20R, M36I, R41K, Q61H, H69K, L89M	A
	CP076303014	CP076303014	HQ995079	None		L10V, I13V, K14R, G16E, K20R, E35D, M36I, R41K, R57K, H69K, L89M	A
	CP076303019	CP076303019	HQ995083	None		I13V, K14R, G17E, Q18H, K20R, E35D, M36I, R41K, R57K, Q61H, H69K, L89M	A
	CP076303035	CP076303035	HQ995096	None		I13V, G16E, K20R, E35D, M36I, R41K, R57K, H69K, L89M	A
	CP076303036	CP076303036	HQ995097	None		T12A, K20R, E35D, M36I, P39Q, R41K, R57K, H69K, L89M	A
	CP076300810	CP076300810	HQ995104	None	L10LF	L19I, K20R, E35D, M36I, R41K, R57K, L63S, H69K, L89M	A
	CP076300852	CP076300852	HQ995119	None		L10V, I13V, G16E, K20R, E35D, M36I, R41K, H69K, L89M	A
	CP076300856	CP076300856	HQ995120	None		I13V, I15V, L19V, K20R, E21K, E35D, M36I, R41K, R57K, Q61D, I64L, H69K, K70R, L89M	A
	CP076300857	CP076300857	HQ995121	None		I13V, I15V, K20R, E35D, M36I, R41K, R57K, L63P, H69K, L89M	A
	CP076300860	CP076300860	HQ995123	None		I13V, K20R, M36I, N37D, H69K, L89M	A
	CP076300861	CP076300861	HQ995124	None		L10I, I13V, G16E, K20R, E35D, M36I, R41K, K45R, R57K, L63Q, H69K, L89M	A
	CP076300867	CP076300867	HQ995126	None		I13V, K20R, E35D, M36I, N37D, R41K, H69K, K70R, L89M	A
	CP076301789	CP076301789	HQ995145	None		L10V, I13V, G16E, K20R, E35D, M36I, R41K, K45R, R57K, L63S, H69K, L89M	A
	CP076301812	CP076301812	HQ995156	None		I13V, K14R, G17E, Q18QH, K20R, E35D, M36I, R41K, R57K, Q61HN, H69K, L89M	A
	CP076301813	CP076301813	HQ995157	None		L10I, I13V, K20R, M36I, R41K, Q61H, L63LV, H69K, L89M, I93IM	A
	CP076301815	CP076301815	HQ995159	None		L10LI, I13V, K14KR, G16E, K20R, E35D, M36I, R41K, R57K, H69K, L89M	A
	CP076301818	CP076301818	HQ995160	None		I13V, K14R, K20R, E35D, M36I, R41K, R57K, H69K, L89M	A
	CP076301831	CP076301831	HQ995165	None		K20R, E35D, M36I, P39Q, R41K, R57K, H69K, L89M	A
	CP076301997	CP076301997	HQ995181	None		I13V, K20R, E35D, M36I, R41K, R57K, H69K, L89M	A
	CP076302008	CP076302008	HQ995184	None		I13V, K20R, E35D, M36I, R41K, R57K, H69K, L89M	A
	CP076302013	CP076302013	HQ995187	None		I13V, K14R, K20R, E35D, M36I, N37D, R41K, R57K, E65K, H69K, L89M	A
	CP076302020	CP076302020	HQ995191	None		I13V, I15V, K20R, E35D, M36I, R41K, R57K, H69K, L89M	A
	CP076302050	CP076302050	HQ995202	None	V11VI	L10LI, I13V, K14KR, G16E, K20R, E35N, M36I, R41K, I62V, L63Q, H69K, L89M	A
	CP076302066	CP076302066	HQ995206	None		I13V, I15V, K20R, E35D, M36I, R41K, R57K, L63P, H69K, L89M	A
	CP076302743	CP076302743	HQ995210	None		I13V, I15V, K20R, E35D, M36I, R41K, R57K, H69K, L89M	A
	CP076302936	CP076302936	HQ995215	None		K20R, E35D, M36I, R41K, K45R, R57K, C67E, H69K, L89M	A
	CP076303047	CP076303047	HQ995230	None		I13V, G16A, K20R, E35D, M36I, R41K, R57K, H69K, L89M	A
	CP076303058	CP076303058	HQ995239	None		I13V, K20R, E35D, M36I, R41K, R57K, H69K, L89M	A
	CP076303069	CP076303069	HQ995249	None		I13V, K14R, G17E, Q18H, K20R, E35D, M36I, R57K, L63P, H69K, L89M	A
	CP076303077	CP076303077	HQ995255	None		I13V, G16E, K20R, E35D, M36I, R41K, R57K, H69K, K70R, L89M	A
	CP076303085	CP076303085	HQ995262	None		I13V, K14R, K20R, E35D, M36I, R41K, R57K, H69K, L89M	A
	CP076303094	CP076303094	HQ995271	None		I13V, K20R, M36I, N37D, R41K, R57K, I62V, L63P, H69K, T74A, L89M	A
	CP076303097	CP076303097	HQ995273	None		L10V, I13V, K14R, K20R, E35D, M36I, R41K, R57K, H69K, L89M	A
	CP076303106	CP076303106	HQ995282	None		K20R, E35D, M36I, N37D, R41K, H69K, L89M	A
	CP076303126	CP076303126	HQ995300	None		I13IV, K14KR, K20R, E35D, M36I, N37D, R41K, R57K, H69K, L89M	A
	CP076303133	CP076303133	HQ995305	None		I13V, K20R, E35D, M36I, N37D, R57K, H69K, L89M	A
	CP076300730	CP076300730	HQ995321	None		L10V, I13V, K14R, K20R, E35D, M36I, N37D, R41K, R57K, D60E, H69K, L89M	A
	CP076300739	CP076300739	HQ995327	None		I13V, K20R, E35D, M36I, R41K, R57K, L63P, H69K, L89M	A
	CP076300762	CP076300762	HQ995334	None		I13V, I15V, K20R, E35D, M36I, R41K, R57K, H69K, K70KR, L89M	A
	CP076300774	CP076300774	HQ995342	None		K20R, E35D, M36I, R41K, H69K, L89M	A
	CP076300783	CP076300783	HQ995348	None		Q2P, T4S, T12P, I13V, L19I, K20R, E35D, M36I, R41K, H69K, L89M	A
	CP076301887	CP076301887	HQ995366	None		T12A, I13V, K20R, M36I, R41K, I62IV, L63LP, H69K, V82I, L89M	A
	CP076301891	CP076301891	HQ995370	None		I13V, Q18H, K20R, E35D, M36I, R41K, R57K, L63LP, I64IV	A
	CP076301908	CP076301908	HQ995383	None		I13V, K14R, K20R, E35D, M36I, R41K, R57K, H69K, L89M	A
	CP076301916	CP076301916	HQ995389	None		L10V, I13V, K20R, E35D, M36I, R41K, H69K, L89M	A
	CP076301926	CP076301926	HQ995397	None		Q2L, T12A, I13V, K20R, E35D, M36I, N37D, R41K, R57K, Q61E, L63V, E65D, H69K, L89M	A
	CP076301933	CP076301933	HQ995400	None		T4S, L10V, K14R, G16E, K20R, E35D, M36I, R41K, R57K, D60E, H69K, L89M	A
	CP076301955	CP076301955	HQ995420	None		I13V, K14R, K20R, E35D, M36I, N37E, R41K, K45R, R57K, L63A, H69K, L89M	A
	CP076301960	CP076301960	HQ995424	None		I13V, G16E, K20R, E35D, M36I, R41K, H69K, I72IMV, L89M	A
	CP076302002	CP076302002	HQ995452	None		I13V, K20R, E35D, M36I, R41K, R57K, H69K, L89M	A
	CP076302011	CP076302011	HQ995453	None	L33F	I13V, K20R, E35D, M36I, R41K, R57K, H69K, L89M	A
	CP076302026	CP076302026	HQ995456	None		I13V, G16E, K20R, E35D, M36I, P39Q, R41K, K45R, I62V, H69K, L89M	A
	CP076302081	CP076302081	HQ995464	None		I13V, L19M, K20R, E35D, M36I, R41K, R57K, H69K, T74TK, L89M, I93M	A
	CP076302870	CP076302870	HQ995465	None		I13V, K14R, G17E, Q18H, K20R, E35D, M36I, N37D, R41K, K45R, H69K, L89M	A
	CP076302912	CP076302912	HQ995476	None		I13IV, K20R, E35D, M36I, R41K, R57K, H69K, L89M	A
	CP076302432	CP076302432	HQ995492	None		I15V, L19Q, K20R, M36I, R41K, L63V, H69K, L89M, I93L	A
Kasang (2011)	2026	2026	HM572365	None	V11VI	I13V, K14R, I15V, G16GE, K20R, E34EG, E35D, M36I, N37D, R41K, R57K, D60E, I62V, H69K, L89M	A
Kousiappa (2011)	CY218	CY218	JF683767	None		I13V, K14R, K20R, E35D, M36I, N37D, R41K, R57K, D60E, Q61E, I62V, H69K, L89M	A
	CY235	CY235	JF683782	None		I13IV, K14E, L19LQ, K20R, E35D, M36I, N37D, K45R, R57K, L63P, H69K, K70KR, L89M	A
	CY236	CY236	JF683783	None		I13V, K14E, K20R, E35D, M36I, N37D, K45R, R57K, L63P, H69K, L89M	A
Ndembi (2011)	AICPS438	AICPS438	HQ702638	None		I13V, L19I, K20R, E35D, M36I, N37D, R41K, K43R, R57K, L63P, H69K, L89M	A
	AICPS225	AICPS225	HQ702656	None		K20R, E35D, M36I, R41K, R57K, H69K, L89M	A
	AICPS216	AICPS216	HQ702657	None		I13V, G17D, K20R, E35D, M36I, N37D, R41K, H69K, L89M	A
	AICPS180	AICPS180	HQ702659	None		I13V, G16E, K20R, E35D, M36I, R41K, R57K, H69K, L89M	A
	NTCPS709	NTCPS709	HQ702661	None		I13V, K20R, E35D, M36I, R41K, K45R, R57K, L63P, H69K, V77I, L89M	A
	AICPS165	AICPS165	HQ702670	None		T12S, I13V, K14R, K20R, E35D, M36I, N37D, R41K, K43R, R57K, L63T, H69K, I72M, L89M	A
Akrim (2012)	N124AC	N124AC	JQ316588	None		T12PS, I13V, K14I, I15V, L19S, K20R, M36I, R41K, L63P, H69K, L89IM, I93L	A
Caron (2012)	Gab011232	Gab011232	HQ541875	None		I13V, G16E, K20R, E35D, M36I, R41K, I62V, I64L, H69K, L89M	A
	Gab012222	Gab012222	HQ541881	None		I13V, K20R, E35D, M36I, R41K, H69K, L89M	A
Chamberland (2012)	C455S	C455S	HQ267574	None		I13V, K14R, G16E, K20R, E35D, M36I, R41K, H69K, I72V, L89M	A
De Gascun (2012)	IRL14285	IRL14285	JN622282	None		L10I, I13V, K14R, G16E, K20R, E35D, M36I, N37ND, R41K, H69KQ, L89M	A
	IRL01320	IRL01320	JN622284	None		I15IL, K20R, E35D, M36I, N37D, R41K, H69K, K70KR, L89I, L97L*	A
	IRL35416	IRL35416	JN622293	None		I13V, K20R, E35D, M36I, N37D, R41K, H69K, L89M	A
	IRL05422	IRL05422	JN622295	None		L10M, I13V, K20R, E35D, M36I, P39Q, R41K, R57K, D60E, Q61E, I62V, C67Y, H69K, K70R, L89M	A
	IRL27860	IRL27860	JN622297	None		I13V, K14R, K20R, E35ED, M36I, R41K, H69K, L89M	A
Hassan (2012)	RS09000871	RS09000871	HQ441616	None		G16E, K20R, E35D, M36I, P39T, R41RK, R57K, L63M, H69K, L89M	A
	RS09000884	RS09000884	HQ441629	None		K20R, E35D, M36I, N37D, R41K, R57K, E65D, H69K, L89M	A
	RS09000886	RS09000886	HQ441631	None		I13IV, K14KR, G16E, K20R, E35D, M36I, R41K, L63V, G68E, H69K, K70R, L89M, T91V, I93L	A
	RS09000907	RS09000907	HQ441652	None		I13V, K20R, E35D, M36I, N37D, R41K, H69K, L89M	A
	RS09000915	RS09000915	HQ441660	None		I13V, K14R, K20R, E35D, M36I, N37D, R41K, R57K, D60E, H69K, L89M	A
	RS09000929	RS09000929	HQ441671	None		T12P, I13V, G16E, K20R, E35D, M36I, N37NS, R41K, Q61N, L63S, G68E, H69K, K70R, L89M, T91V, I93L	A
	RS09000947	RS09000947	HQ441689	None		I13IV, K14KR, K20R, E35D, M36I, R41K, R57K, H69K, L89M	A
	RS09000948	RS09000948	HQ441690	None		I13V, K20R, E35D, M36I, N37D, R41K, G49GE, G51GE, R57K, D60E, H69K, L89M	A
	RS09000962	RS09000962	HQ441700	None		I13V, G16E, K20R, E35D, M36I, R41K, L63T, G68E, H69K, K70R, L89M, T91V, I93L	A
	RS09000963	RS09000963	HQ441701	None		L10LI, I13V, K14R, K20R, M36I, R41K, R57K, Q61QH, H69K, L89M	A
	RS09000968	RS09000968	HQ441706	None		I13V, I15V, K20R, E35D, M36I, R41K, R57K, H69K, K70R, L89M	A
	RS09000970	RS09000970	HQ441708	None		I13V, G16E, K20R, E35D, M36I, R41K, Q61H, L63V, G68E, H69K, K70R, V82VI, L89M, T91V, I93L	A
	RS09000980	RS09000980	HQ441715	None		I13IV, L19I, K20R, E35D, M36I, N37D, R41K, L63V, H69K, L89M, T91V	A
	RS11000240	RS11000240	JQ698342	None		I13V, G16E, K20R, E35D, M36I, R41K, D60DE, L63AT, G68E, H69K, K70R, L89M, T91V, I93L	A
	RS11000248	RS11000248	JQ698348	None		K14R, K20R, E35D, M36I, N37D, R41K, H69K, K70R, L89M	A
	RS11000252	RS11000252	JQ698352	None		L10I, I13V, K20R, E35D, M36I, N37D, R41K, D60E, L63A, C67Y, H69K, L89M	A
	RS11000253	RS11000253	JQ698353	None		L10LV, K20R, E35D, M36I, N37D, R41K, I62V, L63H, H69K, K70R, L89M	A
	RS11000254	RS11000254	JQ698354	None		L10I, I13V, K14KR, K20R, M36I, R41K, R57K, H69K, L89M	A
	RS11000273	RS11000273	JQ698364	None		T12TP, I13V, G16E, L19I, K20R, E35N, M36I, P39S, R41K, L63X, H69K, K70R, L89M	A
	RS11000275	RS11000275	JQ698366	None		I13V, K20R, E35D, M36I, N37D, R41K, R57K, H69K, L89M	A
	RS11000277	RS11000277	JQ698368	None		T12TP, I13V, K20R, E35D, M36I, R41K, K45R, R57K, H69K, L89M	A
	RS11000278	RS11000278	JQ698369	None		I13V, K20R, E35D, M36I, N37D, R41K, R57K, D60E, I62V, H69K, L89M	A
	RS11000288	RS11000288	JQ698375	None		K14R, K20R, E35D, M36I, N37D, R41K, R57K, H69K, L89M	A
	RS11000292	RS11000292	JQ698379	None		T12P, I13V, G16E, K20R, E35D, M36I, R41K, Q61H, L63N, C67CY, G68E, H69K, K70R, I72V, L89I	A
	RS11000293	RS11000293	JQ698380	None		I13V, G16E, K20R, E35D, M36I, R41K, L63V, G68E, H69K, K70KR, L89M, T91V, I93L	A
	RS11000299	RS11000299	JQ698384	None		G16A, K20R, E35D, M36I, N37D, R41K, R57K, H69K, L89M	A
	RS11000300	RS11000300	JQ698385	None		G16E, K20R, M36I, R41K, L63V, G68E, H69K, L89M, T91V, I93L	A
	RS11000320	RS11000320	JQ698398	None		T12P, I13V, G16E, K20R, E35D, M36I, R41K, Q61E, L63V, G68E, H69K, K70R, V82I, L89M, T91V, I93L	A
	RS11000322	RS11000322	JQ698400	None		I13V, K14S, G16E, K20R, E35D, M36I, R41K, L63AGV, H69K, L89M, T91V	A
	RS11000339	RS11000339	JQ698412	None		L10V, I15V, G16E, K20R, E35D, M36I, R41K, R57K, H69K, L89M	A
	RS11000349	RS11000349	JQ698420	None		I13V, K14KR, G16E, K20R, E35D, M36I, R41K, I62V, L63A, G68E, H69K, K70R, L89M, T91V, I93L	A
	RS11000350	RS11000350	JQ698421	None		I13IV, G16E, K20R, E35D, M36I, R41RK, I62V, L63T, G68E, H69R, L89M, T91V, I93L	A
	RS11000366	RS11000366	JQ698430	None		G16E, K20R, E35D, M36I, N37D, R41K, L63M, H69K, L89M	A
Karlsson (2012)	SE_32	SE_32	JQ698688	None		I13V, K20R, E35D, M36I, R41K, K45R, R57K, H69K, L89M	A
	SE_34	SE_34	JQ698689	None	V11I	I13V, K14R, I15V, G16GE, K20R, E35D, M36I, R41K, R57K, L63T, H69K, L89M	A
	SE_186	SE_186	JQ698794	None		L10I, I13V, K14E, G16E, L19Q, K20R, E35D, M36I, P39PS, K45R, R57K, L63T, H69K, L89M	A
	SE_300	SE_300	JQ698874	None		I13V, K14R, G16E, K20R, E35D, M36I, R41K, K45R, R57K, H69K, L89M	A
Nazziwa (2012)	3147901	3147901	JX498982	None		K20R, E35D, M36I, R41K, R57K, H69K, L89M	A
	5013302	5013302	JX498999	None		K20R, E35D, M36I, R41K, R57K, H69K, L89M	A
Reynolds (2012)	E7105	E7105-1	JN652186	None		L10V, I13V, K14KN, G16E, K20R, E35D, M36I, R41K, K45R, R57K, L63Q, I64IM, H69K, K70R, P81PS, L89M	A
	F0293	F0293-1	JN652188	None		I13V, K14R, G16GE, K20R, E35D, M36I, R41K, R57K, H69K, L89M	A
Sigaloff (2012)	KECGP020	KECGP020	JN628463	None		I13V, K14R, K20R, M36I, N37D, R41K, H69K, L89M	A
	KECGP022	KECGP022	JN628464	None		I13V, K20R, E35D, M36I, R41K, R57K, H69K, L89M	A
	KECGP041	KECGP041	JN628466	None		K14R, I15V, K20R, E35D, M36I, N37D, R41K, R57K, I62V, I64M, H69K, I85V, L89M	A
	KECGP059	KECGP059	JN628469	None		I13V, I15V, L19I, K20R, E35D, M36I, N37D, R41K, H69K, K70R, L89M	A
	KEKSN408	KEKSN408	JN628474	None		L10V, I13V, K14R, G16E, Q18H, K20R, E35D, M36I, N37D, R41K, H69K, K70R, L89M	A
	KEKSN410	KEKSN410	JN628475	None		I13V, I15V, G16E, K20R, M36I, R41K, L63A, G68E, H69K, K70R, L89M, T91V, I93L	A
	KEKSN413	KEKSN413	JN628477	None		I13V, K14R, I15V, K20R, E35D, M36I, R41K, K45Q, R57K, I62V, L63A, E65D, H69K, L89M, L97V	A
	KELKN201	KELKN201	JN628482	None		L10I, I13V, K14R, K20R, E35D, M36I, N37D, R41K, H69K, L89M	A
	KELKN211	KELKN211	JN628485	None		I13V, I15V, G16E, K20R, E35D, M36I, R41K, R57K, H69K, L89M	A
	KELKN214	KELKN214	JN628487	None		I13V, K20R, E35D, M36I, N37E, R41K, K45R, R57K, H69K, L89M	A
	KELKN215	KELKN215	JN628488	None		I13V, K20R, E35D, M36I, N37D, R41K, K45R, R57K, H69K, L89M, N98H	A
	KELKN248	KELKN248	JN628511	None		K14R, K20R, E35D, M36I, N37D, R41K, R57K, H69K, T74TS, L89M	A
	KELKN262	KELKN262	JN628521	None		I13V, G16E, K20R, E35D, M36I, R41K, L63V, H69K, K70R, L89M, I93L	A
	KELKN265	KELKN265	JN628523	None		I13V, K20R, E35D, M36I, N37D, R41K, K45R, R57K, L63I, H69K, L89M	A
	KEMGO605	KEMGO605	JN628529	None		I13V, G16E, K20R, E35D, M36I, R41K, R57K, H69K, N88Y, L89M, N98Y	A
	KEMGO612	KEMGO612	JN628531	None		I13V, K14R, L19I, K20R, E35D, M36I, N37E, R41K, R57K, H69K, L89M	A
	KEMGO613	KEMGO613	JN628532	None		I13V, K14R, L19I, K20R, E35D, M36I, N37D, R41K, R57K, H69K, K70KE, L89M	A
Sinha (2012)	AIIMS-78	AIIMS-78	HQ453391	None		I13V, I15V, K20R, E35D, M36I, N37D, R41K, K45KR, R57K, H69K, K70KR, L89M	A
Ssemwanga (2012)	RCC_TDR_482054	RCC_TDR_482054	JQ266057	None		I13V, K14R, K20R, E35D, M36I, R41K, R57K, H69K, L89M	A
	RCC_TDR_355543	RCC_TDR_355543	JQ266062	None		I13V, K20R, E35D, M36I, R41K, R57K, L63P, H69K, L89M	A
	RCC_TDR-481387	RCC_TDR-481387	JQ266076	None		I13V, K14R, K20R, E35D, M36I, N37D, R41K, R57K, H69K, K70R, L89M	A
	RCC_TDR-356779	RCC_TDR-356779	JQ266088	None		I13V, G16E, K20R, E35D, M36I, R41K, R57K, H69K, L89M	A
Ssemwanga (2012)	6699HR	6699HR	JF800207	None		I13V, K20R, E35D, M36I, N37D, R57K, L63P, H69K, L89M	A
	7475HR	7475HR	JF800210	None		K14R, L19I, K20R, E35D, M36I, R41E, R57K, H69K, L89M	A
	7518HR	7518HR	JF800211	None		I13V, K20R, E35D, M36I, R41K, I62V, I64L, H69K, L89M	A
	3153HR	3153HR	JF800217	None		I13V, G16E, K20R, E35D, M36I, R41K, R57K, H69K, L89M	A
	3635HR	3635HR	JF800218	None		I13V, K20R, E35D, M36I, R41K, R57K, H69K, L89M	A
	3203HR	3203HR	JF800224	None		I13V, K20R, E35D, M36I, R41K, R57K, L63P, H69K, L89M	A
	8442HR	8442HR	JF800229	None		I13V, K20R, E35D, M36I, R41K, R57K, H69K, L89M	A
	8627HR	8627HR	JF800230	None		I13V, G16E, K20R, E35D, M36I, R41K, K45R, R57K, L63A, H69K, L89M	A
Yang (2012)	KN-35	KN-35	JQ616930	None		T12S, I13V, K20R, E35D, M36I, R41K, R57K, H69K, L89M	A
	KN-73	KN-73	JQ616936	None		T12S, I13V, K20R, E35D, M36I, N37D, R41K, R57K, D60E, I62V, C67Y, H69K, L89M	A
	KN-93	KN-93	JQ616938	None		T12S, I13V, K20R, E35D, M36I, N37D, R41K, H69K, L89M	A
	KN-95	KN-95	JQ616939	None		T12S, K20R, E35D, M36I, N37E, R41K, R57K, H69K, L89M	A
	KN-45	KN-45	JQ616942	None		T12S, I13V, K14R, L19LI, K20R, E35D, M36I, N37DE, R41K, K45R, R57K, C67Y, H69K, L89M	A
	KEN-68T	KEN-68T		None		I13V, K14R, I15V, K20R, E35D, M36I, N37D, R57K, I62V, E65D, H69K, L89M	A
Frentz (2013)	EHR-17245	EHR-17245	JX299828	None		I13V, K20R, E35D, M36I, N37D, R41K, I64M, H69K, L89M, I93L	A
	EHR-18083	EHR-18083	JX299841	None		I13V, K20R, E35D, M36I, R41K, R57K, H69K, L89M	A
	EHR-22786	EHR-22786	JX299934	None		K20R, E35D, M36I, R41K, H69K, L89M	A
	EHR-49747	EHR-49747	JX300367	None		T12TA, I13V, I15V, K20R, E35D, M36I, R41K, K45R, R57K, H69K, I72IT, L89M	A
	EHR-58280	EHR-58280	JX300512	None		L10I, I13V, I15IV, G16GE, K20R, E35DN, M36I, N37D, R41K, R57K, H69K, L89M	A
	EHR-67400	EHR-67400	JX300674	None		L10V, G16A, K20R, E35D, M36I, N37D, H69K, L89M, I93L	A
	EHR-780208	EHR-780208	JX300885	None		T12S, I13V, K14T, I15V, L19Q, K20R, M36I, N37NS, R41K, L63P, H69K, L89M, I93L	A

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