<!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

Protease Inhibitors

Subtype A
Gene PR
Mutation I13V
Rx >= 1 PI
IncludeMixtures No
References 38
Patients 181
Isolates 207
 
Show mutation frequency as:
Exclude mutations:

Sequences matching input query are shown below. Original reference, patient identifier, isolate name, partial treatment histories and accession number are indicated. Complete treatment histories, when available, can be accessed by clicking the isolate name. Sequences may additionally be downloaded in the fasta format, or viewed as individual or composite alignments using the options above. If the user wishes to view individual alignments of isolates for which there are multiple clones, the user can choose to view either an alignment of consensus sequences derived from the clones or an alignment of each clone as well as a consensus sequence.

Author (yr) Patient Isolate Acc# PIs WksPIMajorDRMs PIMinorDRMs OtherMutSubtype
Gonzales (2001)CA6428CA16183AF331690NFV41  I13V, K14R, I15V, E35D, M36I, R41K, L63M, H69K, L89MA
  CA24095 NFV, LPV123  I13V, E35D, M36I, R41K, L63M, H69K, L89MA
Weidle (2001)PW_UG4399PW_UG4399a RTV69V82AL33FL10V, I13V, K20R, E35D, M36I, R41K, R57K, C67Y, H69K, L89MA
 PW_UG463PW_UG463a IDV13  I13V, E35D, M36I, R41K, L63Q, H69K, L89MA
 PW_UG471PW_UG471aAY900678SQV13  I13V, G16E, K20R, E35D, M36I, R41K, R57K, H69K, K70R, L89MA
 PW_UG473PW_UG473AF358758RTV40  I13V, K20I, E35D, M36I, R41K, H69K, L89MA
 PW_56PW_56AY900821SQV, IDV61 L89MVI13V, K14R, K20I, E35D, M36I, R41K, I62IV, H69K, T74TSA
Yahi (2001)NY_M29M29AY010392IDV M46I, I54V, V82F L10I, I13V, I15V, K20KI, E35D, M36I, R41K, D60E, I62IV, H69Q, L89IA
 NY_M35M35AY010399NFV M46I, L90M L10I, I13V, K14R, G16E, K20I, E35DN, M36I, I62IV, L63S, C67D, H69R, I72T, L89M, I93IMA
 NY_M71M71AY010433IDV   L10V, I13V, K14R, G16E, E35D, M36I, R41K, R57K, H69K, L89MA
 NY_M72M72AY010434IDV M46MI, I84V I13V, K20I, E35D, M36I, R41K, L63P, H69K, A71V, L89TA
 NY_M73M73AY010435IDV   L10V, I13V, K14R, G16E, K20KI, E35D, M36I, R41K, R57K, H69K, T74TA, L89MA
Gibb (2002)DMG102102_w51 NFV52 V32LI13V, E35D, M36I, R41K, K45R, R57K, L63P, H69K, L89MA
 DMG106106_w41 NFV41M46LN83DI13V, G16A, K20R, A22V, E35D, M36I, R41K, R57K, I64IV, H69K, L89MA
  106_w43 NFV43  I13V, K14R, E35D, M36I, R41K, R57K, H69K, L89MA
 DMG1616_w16 NFV15  I13V, K14R, E35D, M36I, N37D, R41K, K45R, R57K, H69K, L89MA
  16_w32 NFV30  I13V, K14R, E35D, M36I, N37D, R41K, K45R, R57K, H69K, L89MA
 DMG6565_w9 NFV9  I13V, G16A, K20R, E35D, M36I, R41K, R57K, H69K, A71AV, L89MA
 DMG6868_w27 NFV27M46MI I13V, G16A, K20R, E35D, M36I, R41K, R57K, H69K, L89MA
  68_w30 NFV30  I13V, G16A, K20R, E35D, M36I, R41K, R57K, H69K, L89MA
 DMG7070_w27 NFV27  I13V, G16E, E35D, M36I, R41K, L63V, G68GE, H69K, L89M, T91V, I93LA
 DMG7777_w19 NFV14  I13V, E35D, M36I, R41K, R57K, H69K, L89MA
  77_w42 NFV37  I13V, E35D, M36I, R41K, R57K, H69K, L89MA
  77_w67 NFV59  I13V, E35D, M36I, R41K, R57K, H69K, L89MA
 DMG8686_w71 NFV54  I13V, K14R, E35D, M36I, R41K, R57K, H69K, L89MA
 DMG9898_w29 NFV29  I13V, E35D, M36I, R41K, K45R, R57K, L63P, H69K, L89MA
  98_w55 NFV55  I13V, K20R, E35D, M36I, N37D, R41K, Q61QE, H69K, I72IV, L89MA
Maguire (2002)SW32381SW32381AY900671APV48M46L, I54L L10I, I13V, K20R, M36I, N37D, R41K, L63V, H69KA
Papa (2002)16GR16AF385360IDV M46I, N88SK43T, L89VI13V, K20I, E35DG, M36I, N37D, R41K, I62IV, H69K, A71TA
Vergne (2002)LV04BLV04BAJ313406IDV74  I13V, G17E, K20I, M36I, N37D, L63P, H69K, K70R, L89MA
Holguin (2003)SP_LP5SP_LP5AF455604PINA  L10I, I13V, K14R, E35D, M36I, R41K, L63V, H69K, L89MA
Shafer (2003)A384_09830983bEF548169NFV43  L10V, I13V, K20T, E35D, M36I, R41K, R57K, H69K, L89M, I93MA
Vergne (2003)VL00SN69HPD00SN69AJ583752IDV I84VG73SI13V, E35D, M36I, R41K, K45R, R57K, L63P, H69K, A71V, L89TA
Weber (2003)3MIRIS3M-24AY140812SQV, RTV22  I13V, E35D, M36I, R41K, H69K, L89MA
 5WIRIS5W-48AY140814IDV48  L5F, I13V, E35D, M36I, R41K, R57K, H69K, L89MA
 SIIRIS6I-48AY140815SQV, RTV52  I13V, E35D, M36I, R41K, R57K, H69K, V77I, L89MA
Gomez-Carrillo (2004)103396103396AY365678PINAI54V I13V, K20I, E35D, M36I, N37D, R41K, I62V, L63V, I66F, G68E, H69R, L89M, T91VA
 104575104575AY365707PINA  I13V, E35D, M36I, N37D, R41K, L63V, H69K, K70R, L89IM, T91VA
 111780111780AY365851PINA  I13V, E35D, M36I, N37D, R41K, L63V, H69K, K70R, L89M, T91VA
Grossman (2004)IL351IL351AY529589NFV226M46IQ58QEI13V, K14KR, K20KR, E35ED, M36I, N37ND, R41K, H69K, L89I, I93LA
Montes (2004)MB_patSAA00_SAA713AJ577989NFV, SQV21  L10I, I13V, I15V, E35D, M36I, R41K, H69K, L89MA
  01_SAA704AJ577990NFV, SQV21  L10I, I13V, I15V, E35D, M36I, R41K, H69K, L89MA
 MB_patBES00_BES703AJ577738SQV104  I13V, I15S, G16R, G17R, E35D, M36I, R41K, R57K, H69K, L89MA
  02_BES706AJ577740SQV, RTV108  I13V, K14R, I15V, E35D, M36I, R41K, R57K, H69K, L89M, G94AA
 MB_patELA02_ELA701AJ577884SQV, RTV, Unknown>25  I13V, G16E, E35D, M36I, R41K, L63A, G68E, H69K, K70R, L89I, T91V, I93LA
 MB_patSAN01_SANC718AJ577992SQV, IDV, RTV143M46I, I84V, L90MG73S, L89VL10V, I13V, G16A, K20R, E35D, M36I, N37E, R41K, D60E, I62V, L63P, H69KA
 MB_patMUZ00_MUZ714AJ577959NFV18 L10FI13V, E35D, M36I, R41K, R57K, H69K, L89IA
 MB_patROI00_ROI705AJ577983SQV, RTV, IDV193  I13V, G16E, K20R, M36I, R41K, L63N, H69K, K70R, L89I, T91V, I93LA
Non-B Workgroup (2005)UK847bUK847bAY900783NFV, LPV   I13V, K14R, E35D, M36I, R41K, R57K, L63P, H69K, L89MA
 UK1436UK1436AY900801SQV, RTV, NFV123 N83DI13V, K14R, K20R, A22V, E35D, M36I, R41K, R57K, H69K, L89I, T91AA
 UK1516UK1516 PI, LPVNAI54L L10I, I13V, G16E, K20T, E35D, M36I, R41K, R57K, L63T, H69K, T74S, V82VI, I85V, L89MA
 UK2088UK2088 RTV V82F I13V, K14R, I15V, K20R, E35D, M36I, R41K, I62V, L63LP, H69K, T74TS, L89I, L97LSA
 UK2149UK2149AY900859Unknown, LPVNAM46I, L76V, I84VL33I, N83DL10I, I13V, A22V, E35D, M36I, N37D, R41K, K45R, R57K, L63P, A71V, L89IA
 PL972860099AY901076IDV, RTV, ATV I54V, V82AL33I, F53L, N83DL10Y, I13V, G16E, K20R, A22AV, E35DN, M36I, N37ND, R41RK, L63T, H69K, T74S, L89M, T91AA
 TK1001TK1001 IDV129  L10I, I13V, K14R, E35D, M36I, R41K, R57K, H69K, L89MA
  TK1001a IDV179V82A L10I, I13V, K14R, E35D, M36I, R41K, R57K, H69K, L89IA
 TK1005TK1005 RTV, IDV, NFV201  I13V, E35D, M36I, N37ND, R41K, R57RK, L63LI, H69K, L89MA
 TK1010TK1010a IDV, Unknown>229 L10FT12I, I13V, G16E, E35D, M36I, R41K, R57K, H69K, K70R, L89MA
  TK1010b IDV, Unknown>229 L10FT12I, I13V, G16E, E35D, M36I, R41K, R57K, I62V, L63H, H69K, K70R, L89MA
 TK1025TK1025 IDV, LPV180  I13V, I15V, E35D, M36I, R41K, K45R, R57K, Q61E, I64M, H69K, K70Q, I72IV, L89MA
 TK1030TK1030 SQV, RTV, IDV146  L10I, I13V, G16E, E35D, M36I, R41K, R57K, L63S, H69K, L89MA
  TK1030a SQV, RTV, IDV305  L10V, I13V, G16GE, E35D, M36I, R41K, R57K, L63PS, H69K, L89MA
 TK2002TK2002 IDV, RTV273M46MI, V82ATL33I, N83DL10LI, I13V, K14R, A22AV, E35D, M36I, R41K, R57K, H69K, L89IMA
 TK2004TK2004 IDV181  I13V, K20R, E35D, M36I, R41K, R57K, H69K, K70R, L89MA
 TK2007TK2007 SQV, RTV69  I13V, E35D, M36I, N37ND, R41K, K45R, R57K, H69K, L89MA
 TK2012TK2012 RTV, IDV, SQV186I54V, L90M L10V, I13V, K14R, I15V, K20R, E35D, M36I, R41K, R57K, I62V, H69K, T74S, L89IA
 TK2017TK2017 NFV35  I13V, E35D, M36I, R41K, R57K, H69K, V77I, L89MA
 TK2021TK2021 NFV88  I13V, I15V, E35D, M36I, R41K, R57RK, H69K, K70R, L89MA
 TK2022TK2022 SQV, RTV12  L10X, I13V, I15IV, L19LI, E35D, M36I, R41K, R57K, L63X, H69K, L89MA
 TK2027TK2027 IDV, RTV90  I13V, E35D, M36I, R41K, K45R, R57K, H69K, L89MA
 TK2029TK2029 IDV39  L10I, I13V, K14R, G16GE, E35D, M36I, R41K, K45R, R57K, L63P, H69K, V77I, L89MA
 TK3001TK3001 SQV90L90ML33FI13V, K14R, K20T, M36I, R41K, K43N, R57K, H69K, V82I, I85V, L89MA
 TK3017TK3017 RTV174L90M L10V, I13V, G16E, K20R, E35D, M36I, R41K, L63T, H69K, L89MA
  TK3017a RTV222L90M L10V, I13V, G16E, K20R, E35D, M36I, P39PS, R41K, L63T, H69K, L89MA
  TK3017b RTV230L90M L10V, I13V, G16E, K20R, E35D, M36I, P39PS, R41K, L63T, H69K, L89MA
  TK3017c RTV249L90M L10V, I13V, G16E, K20R, E35D, M36I, P39PS, R41K, L63T, H69K, L89MA
 TK3029TK3029 SQV, NFV149L90M L10V, I13V, K20T, E35D, M36I, R41K, H69K, T74S, L89IA
  TK3029a SQV, NFV, LPV207  I13V, E35D, M36I, R41K, H69K, L89MA
 TK3030TK3030 SQV, NFV250  I13V, E35D, M36I, N37NT, R41K, K45R, R57K, H69K, L89M, I93IMA
  TK3030a SQV, NFV312I54IL, L90LM I13V, K20RT, E35D, M36I, N37NT, R41K, K45KR, R57K, H69K, A71AV, L89I, I93IMA
 TK3033TK3033 NFV1  I13V, I15IV, E35D, M36I, R41K, R57K, H69K, L89MA
  TK3033a NFV1  I13V, K20KR, E35D, M36I, R41K, R57K, H69K, L89MA
 TK4003TK4003 NFV116 N83DL10V, I13V, K14R, G16E, E35D, M36I, R41K, K45R, R57K, L63T, H69K, K70R, L89M, I93LA
  TK4003a NFV215I54VL33I, N83DL10V, I13V, K14R, G16E, A22V, E35D, M36I, R41K, K45R, L63T, H69R, K70R, L89IA
 TK4006TK4006 NFV83N88SL10FI13V, I15V, K20I, E35N, M36I, R41K, K45R, R57Q, H69K, L89IA
 TK4007TK4007 NFV178M46I I13V, E35D, M36I, R41K, R57K, L63P, H69K, A71AV, L89TA
 TK4009TK4009 IDV336  I13V, K14R, G16E, K20R, E35D, M36I, R41K, H69K, L89M, I93LA
 TK4013TK4013 SQV, RTV, NFV213  I13V, K14R, I15V, E35D, M36I, R41K, R57K, H69K, L89MA
 TK5002TK5002 NFV189N88SL10FI13V, K14R, I15V, K20T, E35D, M36I, R41K, K45R, R57K, H69K, L89IA
 TK5005TK5005 SQV, IDV, RTV, NFV, LPV180G48V, I54T, V82A, L90M L10I, I13V, K14R, G17D, K20R, E34N, E35D, M36I, R41K, R57K, D60E, I62V, L63P, H69K, A71V, L89IA
  TK5005a SQV, IDV, RTV, NFV, LPV196G48V, I54T, L90M L10I, I13V, K14R, G17D, K20R, E34N, E35D, M36I, R41K, R57K, D60E, I62V, L63P, H69K, A71IV, L89I, I93IMA
 TK5008TK5008 IDV93  I13V, G16E, K20R, E35D, M36I, R41K, R57K, H69K, K70R, L89MA
 TK5012TK5012 IDV54  L10I, I13V, K14R, G16E, K20R, E35D, M36I, R41K, L63T, H69K, L89MA
  TK5012a IDV, LPV152  L10I, I13V, K14KR, G16E, K20R, E35D, M36I, R41K, L63T, H69K, L89MA
  TK5012b IDV, LPV191  L10IV, I13V, K14KR, G16E, K20R, E35D, M36I, R41K, L63T, H69K, L89MA
  TK5012c IDV, LPV215  L10I, I13V, K14KR, G16E, K20R, D25DG, E35D, M36I, R41K, L63ST, H69K, L89MA
 PL3403155128 IDV, NFV207M46I, I84VL89VL10I, T12S, I13V, L19V, K20I, E35D, N37D, L63P, I66F, H69K, K70R, A71VA
Weber (2005)F75698F75698AY677379NFV39  I13V, R41K, L63Q, I64VA
 F45753F45753AY677422SQV, NFV258  L10I, I13V, G16E, K20R, E35D, M36I, P39S, R41K, H69K, L89MA
 M76115M76115AY677424LPV19  I13V, I15V, E35D, M36I, N37E, R41K, K45R, R57K, H69K, L89MA
 M49551M49551AY677385RTV96  T4TP, I13V, G16E, E35D, M36I, R41K, H69K, L89MA
 M50457M50457AY677433NFV94  L10I, T12S, I13V, K14KR, I15IV, K20I, E35D, M36I, N37S, R41K, K45R, H69K, A71V, L89TA
 F46097F46097AY677388NFV, SQV, RTV148  T4TP, I13V, K14R, Q18QH, E35D, M36I, R41K, R57K, L63P, H69K, L89MA
 F51354F51354AY677444SQV, NFV115  L10V, I13V, K14R, G16E, K20T, E35D, M36I, R41K, R57K, L63T, H69K, I72T, T74TA, L89MA
 M36781M36781-2AY714402Unknown, LPV>8  I13V, G16E, E35D, M36I, R41K, K45R, R57K, H69K, I72K, L89MA
 F65588F65588AY677449NFV46  I13V, E35D, M36I, R41K, K45R, R57K, H69K, V82I, L89MA
 F57352F57352AY677463NFV145L90LM L10LV, I13V, I15V, K20KT, E35D, M36I, R41K, K45KQ, I62IV, H69K, T74TK, L89IMA
 M41971M41971AY677401IDV, NFV, LPV181I54V, V82AL10F, L33IT4TS, I13V, G16E, L19LI, K20R, E35D, M36I, N37D, R41K, K45V, K55T, R57K, L63H, H69K, K70R, L89M, T91TSA
 F87084F87084AY677406IDV28  L10I, I13V, K14R, G16E, E35D, M36I, R41K, R57K, L63V, H69K, L89MA
 F73291F73291AY677477NFV195M46LL33I, N83DL10V, I13V, A22V, E35D, M36I, R41K, I62V, L63PS, H69K, T74S, L89I, I93LA
 F78596F78596AY677480IDV18  L10I, I13V, I15L, K20I, E35D, M36I, L63S, H69K, L89MA
 M47502M47502AY677409NFV51N88NS L10I, I13V, K20KT, E35ED, M36I, R41K, L63T, I64IV, H69K, L89MA
 M41984M41984AY677484IDV139 L33FI13V, K14R, E35D, M36I, R41K, K43KR, R57K, H69K, L89MA
 89M262689M2626AY677414SQV, NFV, RTV261I54V, L90MF53L, L89VL10I, I13V, K14R, K20I, E35D, M36I, N37E, R41K, R57K, H69K, A71V, T74SA
 F40883F40883AY714449NFV, Unknown, LPV>105  I13V, I15V, K20KR, E35D, M36I, R41K, R57K, H69K, L89MA
 F56706F56706AY714473SQV, RTV153  T12A, I13V, E35D, M36I, N37D, R41K, R57K, D60E, H69K, L89MA
Baxter (2006)12-20242024-30709DQ876698PINAM46L, I54VL33F, N83DL10V, I13V, K14R, E35D, M36IL, N37ND, R41K, R57K, H69Q, L89MA
 12-21202120-30715DQ876783PINAM46I, I47V, L90ML10F, L33I, F53L, G73GS, N88G, L89VI13V, K14R, K20T, E35D, M36I, R41K, R57K, I62V, L63P, H69K, A71IA
  2120-40510DQ876754PI, RTV, TPV>43M46I, I47V, L90ML10F, L33I, F53L, G73S, N88G, L89VI13V, K14R, K20T, E35D, M36I, R41K, R57K, I62V, L63P, H69K, A71IA
 48-12021202-30702DQ877746PINAI54V, V82A, L90ML33F, N83DI13V, G16E, K20R, E35D, M36I, N37D, R41K, R57RK, L63N, H69K, K70R, L89I, T91V, I93LA
 48-12041204-30709DQ877748PINAM46I, G48Q, I54T, V82FL33F, Q58E, N83DL10V, I13V, G16E, E35D, M36L, P39S, R57K, I62V, L63V, H69K, T74A, L89MA
 48-12531253-30605DQ877778PINA  L10V, T12TP, I13V, K14R, G16E, K20R, E35D, M36I, R41K, R57RK, Q61QE, I62IV, L63CS, H69K, L89MA
 48-12541254-30617DQ877779PINAG48VL33F, N83DL10LI, I13V, E35D, M36V, N37NS, P39T, R41K, R57K, L63S, H69K, L89MA
  1254-40601DQ877780PI, RTV, TPV>50 L33FT12A, I13V, E35D, M36IV, P39AT, R41K, R57K, L63S, H69K, L89MA
 48-30453045-30317DQ877957PINAG48V, I54S, V82AL33F, Q58E, N83DL10V, I13V, K14R, I15V, M36L, R41RK, D60DE, I62IV, L63P, H69K, I85V, L89I, T91TSA
 48-33163316-30818DQ878217PINAI54A, V82F L10I, T12TK, I13V, G16A, L19LV, K20I, E35N, M36I, R41K, D60E, L63P, H69K, T74S, V77I, L89MA
 48-40184018-30227DQ878252PINAM46IL10F, V11I, L24I, L33F, Q58E, T74PT12TA, I13V, E35D, M36IV, N37D, I62V, L63T, H69K, K70R, I85V, L89MA
 48-41534153-30326DQ878387PINAM46I, I54L, L76V, I84VL10FI13V, G16E, K20I, L33L_L, E35D, M36I, R57K, Q61R, L63T, H69K, L89I, T91TSA
 48-41864186-30408DQ878420PINAI54V, V82AL24I, L33I, Q58E, N83DL10I, I13V, G16E, K20R, A22V, E35D, M36I, N37D, R41K, L63T, H69K, I72V, T74A, L89M, T91V, I93LA
 48-42024202-30804DQ878434PINA  L10V, I13V, K14KR, I15V, G16E, E35D, M36I, R41K, K45R, L63T, H69KA
 48-42174217-30915DQ878451PINAM46L, I54V, I84V, L90ML33F, K43T, N88GL10I, I13V, K14R, K20R, E21Q, E35D, M36I, N37D, Q61N, I62V, L63Q, H69K, A71L, T74S, Q92R, I93MA
 48-50055005-30422DQ878538PINAI54IATV, V82VA, L90LML33LFL10LI, I13V, K14KR, L19LI, K20KR, E35D, M36I, R41K, K45R, R57K, L63P, H69K, L89IMA
 48-50105010-30820DQ878543PINAM46MIL, I54V, V82AQ58EL10I, I13V, K20KR, E35D, M36I, N37ND, R41K, I62V, L63P, A71TA
 48-50215021-30606DQ878555PINAI54V, V82F, I84IV, L90ML33F, F53LL10I, V11L, I13V, I15V, G16E, L19P, K20I, E35N, M36I, K45V, L63T, H69K, L89MA
 48-50315031-30421DQ878557PINAM46I, I54V, V82AG73SI13V, I15V, K20I, E35D, M36I, Q61H, L63D, H69K, A71V, L89TA
 48-50325032-30421DQ878558PINAI54V, L90ML10F, L33I, L89VI13V, E35D, M36I, R41K, R57K, I62IV, L63LP, H69KA
 48-50355035-30421DQ878561PINA  T12P, I13V, K14R, E35D, M36I, R41K, K45R, R57K, L63P, H69K, K70R, L89MA
Laurent (2006)CK2-7502CM-75AM279446IDV39  L10V, I13V, I15V, E35D, M36I, R41K, R57K, D60E, H69K, L89MA
 CK22-3503CM2-35AM279456IDV74I54IV, V82AL33LIL10I, I13V, E35D, M36I, R41K, K45R, L63P, H69K, L89TA
Tee (2006)MYKL185504MYKL1855AY960955LPV I54V, V82FL33I, L89VL10I, I13V, Q18H, A22V, E35D, M36I, N37D, H69K, A71V, I93MA
Seyler (2007)265CS_265 IDV66  L10V, I13V, L19P, K20I, M36I, R41K, K43R, L63LP, H69K, L89MA
 293CS_293 NFV150N88NSV11VIL10M, T12TA, I13V, K14R, G16E, K20KI, E35D, M36I, R41K, K43KR, H69K, I72IR, L89MTA
 483CS_483 NFV162  L10V, I13V, G16GE, E35D, M36I, R41K, H69K, K70R, L89MA
 547CS_547 NFV268 G48GR, V82VDI13V, K14R, G16GR, K20I, M36IT, R41K, L63P, H69K, L89MA
von Wyl (2007)85495945EF449807PINA  L10V, I13V, E35D, M36I, R41K, H69K, L89MA
 1345191462EF449882PINA  L10V, I13V, E35D, M36I, R41K, K45R, R57K, L63V, L89MA
 13662529EF449971PINA  I13V, I15V, E35D, M36I, R41K, R57K, H69K, T74S, L89MA
 70496347EF449835PINA N83DI13V, M36L, N37T, R41K, H69K, L89IA
Gody (2008)Pt047Pt047 IDV   L10V, I13V, G16E, E35D, M36I, N37D, L63AS, H69K, I72V, L89MA
Rosen-Zvi (2008)3901p39-1 RTV, IDV, LPV138  I13V, E35D, M36I, R41K, K45R, L63LP, H69K, L89MA
Sylla (2008)A2868A2868_C1EF525663IDV   L10I, I13V, G16E, K20R, E35D, M36I, R41K, H69K, K70R, I72R, L89MA
Koyalta (2009)17TCHAD-17FJ688177IDV26M46I, I84V L10I, I13V, K14R, I15V, K20I, M36I, R41K, R57K, L63P, I66F, H69N, I72V, L89IA
 33TCHAD-33FJ688184IDV26  L10I, I13V, G16A, K20I, E35D, M36I, R41K, H69Q, L89MA
Rhee (2009)CA6428CA21387FJ983200NFV91  I13V, E35D, M36I, R41K, L63M, H69K, L89MA
Steegen (2009)BV114BV114-1EU872122LPV4  I13V, G16E, K20R, E35D, M36I, R41K, Q61H, L63T, G68E, H69K, K70R, V82I, L89M, T91V, I93LA
 BV223BV223-1EU872135LPV4  I13V, E35D, M36I, P39Q, R41K, L63P, H69K, L89MA
Thomson (2009)SP_B_008RU_SP_B_008FJ009786LPV   L10LI, I13V, K14R, M36I, R41K, H69K, L89MA
 SP_B_028RU_SP_B_028FJ009793NFV   L10LI, I13V, K14R, E35D, M36I, R41K, R57K, H69K, L89M, I93ILA
 SP_B_051RU_SP_B_051FJ009809DRV4  I13V, I15V, E35D, M36I, R41K, H69K, V77I, L89M, I93LA
Dau (2010)10412A10412AGU582000PINA  L10V, I13V, E35D, M36I, R41K, L63V, I64V, H69KA
 11741A11741AGU582052PINAN88SL10F, L89VI13V, K20T, E35D, M36I, R41K, I62V, L63P, H69K, T74SA
Hamkar (2010)2Ir-HIV-DR-02GU724805PINA  I13V, K14I, L19Q, K20R, E35D, M36I, R41K, R57K, H69K, L89MA
 3Ir-HIV-DR-03GU724806PINA  I13V, K14I, L19Q, K20R, E35D, M36I, R41K, R57K, H69K, L89MA
 6Ir-HIV-DR-06GU724809PINA  I13V, K14I, L19Q, K20R, E35D, M36I, R41K, R57K, H69K, L89MA
 7Ir-HIV-DR-07GU724810PINA  I13V, K14I, L19Q, K20R, E35D, M36I, R41K, R57K, H69K, L89MA
 8Ir-HIV-DR-08GU724811PINA  I13V, K14I, L19Q, K20R, E35D, M36I, R41K, R57K, H69K, L89MA
 9Ir-HIV-DR-09GU724812PINA  I13V, K14I, L19Q, K20R, E35D, M36I, R41K, R57K, H69K, L89MA
 11Ir-HIV-DR-11GU724814PINA  T12K, I13V, K14I, L19Q, K20R, E35D, M36I, R41K, G49E, R57K, H69K, L89MA
 12Ir-HIV-DR-12GU724815PINA  I13V, K14I, L19Q, K20R, E35D, M36I, R41K, R57K, H69K, L89MA
 14Ir-HIV-DR-14GU724817PINA  I13V, L19Q, K20R, E35D, M36I, R41K, R57K, H69K, L89MA
 15Ir-HIV-DR-15GU724818PINA  I13V, L19Q, K20R, E35D, M36I, R41K, R57K, H69K, L89MA
 19Ir-HIV-DR-19GU724822PINA  I13V, L19Q, K20R, E35D, M36I, R41K, R57K, C67Y, H69K, L89MA
 21Ir-HIV-DR-21GU724824PINA  I13V, L19Q, K20R, E35D, M36I, R41K, R57K, C67Y, H69K, L89MA
 24Ir-HIV-DR-24GU724827PINA  I13V, K14I, L19Q, K20R, E35D, M36I, R41K, R57K, H69K, L89MA
 25Ir-HIV-DR-25GU724828PINA  I13V, L19Q, K20R, E35D, M36I, R41K, R57K, H69K, L89MA
 28Ir-HIV-DR-28GU724831PINA  I13V, K14I, L19Q, K20R, E35D, M36I, R41K, R57K, H69K, L89MA
 31Ir-HIV-DR-31GU724834PINA  I13V, K14I, L19Q, K20R, E35D, M36I, R41K, R57K, H69K, L89MA
 34Ir-HIV-DR-34GU724837PINA  I13V, K14I, L19Q, K20R, E35D, M36I, R41K, R57K, H69K, L89MA
 35Ir-HIV-DR-35GU724838PINA  I13V, K14I, L19Q, K20R, E35D, M36I, R41K, R57K, H69K, L89MA
 37Ir-HIV-DR-37GU724840PINA  I13V, K14I, L19Q, K20R, E35D, M36I, N37F, R41K, R57K, E65G, I66V, H69K, L89MA
 38Ir-HIV-DR-38GU724841PINA  I13V, K14I, L19Q, K20R, A28P, E35D, M36I, R41K, R57K, H69K, L89MA
 40Ir-HIV-DR-40GU724843PINA  I13V, L19Q, K20R, E35D, M36I, R41K, R57K, C67Y, H69K, L89MA
Charpentier (2011)32CP 001-144 Unknown, LPVNA  I13V, K14R, G17E, K20I, E34K, M36I, N37D, P39M, L63T, I64M, H69K, K70KR, I72T, L89MA
 51CP 001 2273 Unknown, LPVNA  T12P, I13V, G16E, K20R, E35D, M36I, R41K, K55K*, L63T, E65EG, G68GE, H69KR, L89MA
Barber (2012)5085750857JQ361664LPV M46I, L76V, I84V L10I, I13V, G16E, M36I, R41K, L63T, H69K, L89MA
 4882648826JQ361679LPV V32I, M46I, I47AL10F, L33I, L89VI13V, K20R, E35D, M36I, R41K, R57K, I62V, H69K, K70R, T74SA
 6778467784JQ361691LPV I54V I13V, G17D, K20R, E35D, M36I, R41K, R57K, D60E, I62V, L63I, H69K, L89MA
El Annaz (2012)929929.PRJN185233PINA  L10V, I13V, K14R, G16E, E35D, M36I, R41K, H69K, L89M, I93ILA
 13281328.PRJN185236PINA  L10I, I13V, E21Q, E35D, M36I, R41K, H69K, L89MA
 14291429.PRJN185237PINA  L10V, I13V, K14R, I15V, M36I, L63P, H69K, L89MA
 18771877.PRJN185240PINA  L10V, I13V, I15V, M36I, L63P, H69K, L89MA
 52185218.PRJN185254IDV52  L10V, I13V, K14R, G16E, E35D, M36I, R41K, H69K, L89MA
Jones (2012)159797159797JN669961PINAM46I, I54V, L76V, V82AL33LFL10I, I13V, I15IV, G16E, K20M, E35D, M36I, R41K, K55R, R57K, Q61N, A71T, I72R, L89IA
 160444160444JN669977PINAI54IVL10F, F53FLI13V, E35D, M36I, N37D, R41K, L63V, H69K, K70R, T74A, L89M, T91VA
 178278178278JN670478PINAI54V, V82VA, L90LML10F, F53LI13V, K20I, E35D, M36I, N37D, R41K, I62V, L63V, H69K, K70R, T74A, L89M, T91VA
 184144184144JN670673PINAM46I, I50IL, I54AV, V82AL24I, L33F, Q58EL10I, T12N, I13V, G16GE, K20I, E35N, M36I, N37E, R41K, R57K, D60E, Q61N, L63T, I72T, L89MA
 199883199883JN671186PINAM46I, I54V, V82A, L90MN88DL10I, I13V, I15V, L19I, K20I, E35D, M36I, N37K, R41K, K45R, K55R, R57K, Q61N, L63P, C67F, A71T, I72EA
 203362203362JN671308PINA  L5LF, L10LP, I13V, G16E, E35D, M36I, R41K, L63V, H69K, L89M, T91VA
Mollan (2012)MK105MK105w24 RTV, ATV24  I13V, E35D, M36I, R41K, R57K, H69K, L89MA
 MK186MK186w26 RTV, ATV25  I13V, E35N, M36I, R41K, R57K, H69K, L89MA
Reynolds (2012)J7227J0722-2JN652210LPV   I13V, K20I, A22AV, E35N, M36I, R41K, H69K, V77I, L89MA
Van Zyl (2013)11791314KC423050LPV26  T12S, I13V, I15V, G16E, K20R, E35D, M36I, L63S, I64L, H69K, L89M, I93LA
 11961593KC423255LPV52 L33FI13V, K20R, M36I, R41K, D60E, Q61E, H69K, L89M, I93VA
 7211935KC423520LPV52  T12P, I13V, I15V, G16E, E35D, M36I, R41RK, D60DE, L63S, H69K, K70R, L89IM, T91V, I93LA
Grossman (2014)12211221KF134967LPV52  I13V, K14KR, I15V, E35D, M36I, N37D, R41K, Q61E, H69K, K70R, L89MA
 5959KC213684NFV, LPV52 V11CFISW6RS, Q7D, R8T, L10LH, I13V, K20I, E35D, M36I, R41K, H69K, L89M, Q92L, I93L, T96HA
 792792KC184392LPV52  I13V, E35D, M36I, R41K, H69K, T74S, L89M, I93LA