<!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

Reverse Transcriptase Inhibitors

Subtype D
Gene RT
Mutation E40D
Rx RTI-naive
IncludeMixtures No
References 67
Patients 291
Isolates 292
 
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Sequences matching input query are shown below. Original reference, patient identifier, isolate name, partial treatment histories and accession number are indicated. Complete treatment histories, when available, can be accessed by clicking the isolate name. Sequences may additionally be downloaded in the fasta format, or viewed as individual or composite alignments using the options above. If the user wishes to view individual alignments of isolates for which there are multiple clones, the user can choose to view either an alignment of consensus sequences derived from the clones or an alignment of each clone as well as a consensus sequence.

Author (yr) Patient Isolate Acc# NRTIs NNRTIsNRTIDRMs NNRTIDRMs OtherMutSubtype
Alizon (1986)ELIELIK03454NoneNone  V35T, E40D, K49R, V60I, K122E, P133S, D177E, I178M, E204K, Q207E, T216R, P243S, V245K, D250E, K259N, G262E, K263R, A272P, K277R, Q334H, T369A, K374R, A376S, K385R, K390R, A400T, T403A, V435I, S468P, H483N, S519N, A554QD
Cornelissen (1997)92UG00192UG001AF009395NoneNone  V35T, T39A, E40D, K49R, K122V, I135T, S162C, D177E, E203D, Q207E, V245K, D250E, A272P, G273X, K275R, K277R, Q278H, K281R, T286A, E297KD
 92UG04692UG046AF009401NoneNone  V8I, V35I, E40D, S48T, K49R, V60I, D121Y, K122E, D123E, I135T, D177E, I178M, T200I, Q207E, R211K, V245K, D250E, A272P, V276I, K277R, L282C, L283I, T286A, I293VD
Gao (1998)84ZR08584ZR085U88822NoneNone  V35T, E40D, K49R, V60I, V106I, V118I, D121C, K122E, T165I, D177E, I178V, T200A, E204K, Q207E, F214L, P243S, V245T, D250E, A272P, V314M, I329L, T377I, K390R, A400T, T403I, E404D, V435I, R448K, S468P, L469F, H483N, A554SD
Becker-Pergola (2000)151.940BPG151-940AF188498NoneNone  P4H, V35T, E40D, K49R, V60I, D121Y, K122E, D123E, I159V, D177E, I178M, T200I, Q207G, R211K, V245K, D250E, A272P, L282C, L283I, R284K, I293V, L310QD
Vergne (2000)LVMBS34LVMBS34AJ287019NoneNone  V35T, E40D, V60I, Q207E, R211K, V245K, D250E, A272P, V276I, K311R, I329V, Q334N, G335S, Y339F, G359S, T369A, A371V, A376S, T386I, K390R, A400I, T403VD
Caumont (2001)AC12AC12AF326198NoneNone  V35T, E40D, K49R, V60I, D121Y, K122E, I159V, E169EK, K173N, Q174K, D177E, Q207E, R211K, F214L, V245ED
Cuevas (2002)CU62CU62AF425443NoneNone  V35T, E40D, K49R, E53D, V60I, I135V, I142T, T165I, E169D, D177E, I202V, Q207E, R211KD
 CU29CU29AF425410NoneNone  V8I, V35T, T39A, E40D, K49R, V60I, S68G, K122E, I135V, T139A, E169D, D177E, Q207ED
 CU7CU7AF425388NoneNone  V35T, E40D, V60I, D123S, D177E, I178L, E194K, E204K, Q207E, R211K, F214LD
Hierholzer (2002)SU005SU005AY102488NoneNone  V35T, E40D, K49R, V60I, K122A, E169D, D177E, I178M, T200I, Q207G, R211K, V245K, D250ED
 SU510SU510AY102487NoneNone  V35T, E40D, K49R, V60I, K101R, D177E, I178M, T200I, Q207E, R211K, V245K, E248D, D250ED
 SU049SU049AY102492NoneNone  K11Q, V35T, E40D, K49R, V60I, D121Y, K122E, D177E, I178M, T200I, Q207E, R211K, V245E, D250ED
Pandrea (2002)IP_97CIRMF2797CIRMF27AY140614NoneNone  V35T, E40D, K49R, V60I, V106I, V118I, T165V, D177E, I178L, V189I, E204K, Q207E, F214LD
Gonzalez (2003)PG_GT1138GT1138AF529943NoneNone  V35T, E40D, K49R, V60I, V118I, K122T, T165I, D177E, I178L, E204K, Q207E, F214L, V245TD
 PG_GT576GT576AF529945NoneNone  V35T, E40D, K49R, V60I, V118I, I135T, T165I, D177E, I178L, T200I, E204K, Q207E, F214L, V245TD
 PG_GT970GT970AF529952NoneNone  V35T, E40D, K49R, V60I, V118I, K122T, Q145W, T165I, D177E, I178L, T200A, E204K, Q207E, F214L, V245TD
 PG_GT995GT995AF529954NoneNone  V35T, E40D, K49R, V60I, V118I, K122P, E138G, D177E, I178L, E204N, Q207E, F214L, V245T, E248DD
Jorgensen (2003)JLB_Pat15HIM419441AJ419441NoneNone  K32R, V35T, E40D, K49R, V60I, T200I, Q207E, R211K, V245X, D250E, A272P, K277R, L282C, L283I, T286A, A288T, I293V, I309VD
 JLB_Pat36HIM419462AJ419462NoneNone Y188YD, G190GVV35T, E40D, K49R, V60I, D121C, D177E, D185DE, Q207E, V245K, D250E, S251N, A272PD
Eshleman (2004)SE490SE490pAY435392NoneNone  V35T, E40D, K49R, V60I, D121C, K122E, I135T, S162A, T165I, D177E, I178L, T200I, E204K, Q207E, R211K, F214L, I244V, V245Q, D250E, A272P, K277R, L282C, T286A, I293V, E297A, A327AVD
Eshleman (2004)ABB208ABB208AY444271NoneNone  V35T, T39A, E40D, K49R, V60I, R83K, D123E, I135T, T139S, S162C, R172K, D177E, I178L, V179T, Q182AS, T200A, E204K, Q207E, R211K, F214L, V245T, S251D, A272P, K281R, T286A, V292I, E297K, K311R, D324E, I329V, G333E, Q334ED
 151_940151_940AY444263NoneNone  P4H, V35T, E40D, K49R, V60I, D121HY, K122E, D123E, I159V, D177E, I178M, T200I, Q207G, R211K, V245K, D250E, A272P, L282C, L283I, R284K, I293VD
 23878012387801AY444265NoneNone  K20R, V35T, E40D, K49R, V60I, D121C, K122E, T165I, D177E, I178L, G196S, T200A, I202V, Q207E, R211K, F214L, V245T, E248H, D250E, A272P, I274IV, Q278QH, T286A, I329LD
Fang (2004)ML249_3_1997249_3_1997AY322187NoneNone V179EP4H, V35T, E40D, K49R, V60I, K122E, A158S, D177E, I178L, T200I, Q207G, R211K, P243Q, V245E, D250E, A272P, K277R, K281R, L282C, L283I, T286A, I293V, G335D, P345Q, F346Y, A355T, R356K, A360T, E370A, T377Q, S379C, K390R, A400T, H483N, A534S, A554N, I556V, V559ID
Shi (2004)pWCML249pWCML249AY445524NoneNone  P4H, V35T, E40D, K49R, V60I, D121Y, K122E, T139A, A158S, D177E, I178L, T200I, Q207G, R211K, V245E, D250E, A272P, K277R, L282C, L283I, T286A, A288T, I293V, L310P, P321Q, E328D, G335D, P345Q, F346Y, A355T, R356K, M357L, A360T, E370A, T377Q, S379C, K390R, A400T, H483N, A534S, A554N, I556V, V559ID
Yang (2004)97KE49197KE491AY492770NoneNone  V35T, T39A, E40D, K49R, V60I, K122E, D123G, A158S, D177E, I178M, V179I, Q207E, V245KD
 99KE57799KE577AY492779NoneNone  E6K, V21I, V35T, E40D, K49R, V60I, K102Q, K122E, D177E, I178L, Q207E, R211K, V245K, D250ED
 96KE00696KE006AY492783NoneNone  V35T, E40D, V60I, K122E, D123E, D177E, I178M, G196E, Q207E, R211K, V245K, D250ED
 99KE59399KE593AY492788NoneNone  V35T, E40D, K49R, V60I, K122E, D123G, D177E, I178M, I195L, Q207A, R211S, V245K, D250ED
Casado (2005)CU7CU7AY894994NoneNone  V35T, E40D, V60I, K122E, D123S, E169D, D177E, R211K, V245S, D250E, A272P, K277R, T286A, I329V, G335D, R356K, A376S, T377L, T386I, K390R, T403R, V435M, H483N, K530R, A554SD
K'Aluoch (2005)OK_TC008803TC008803DQ079849NoneNone  V35T, T39A, E40D, V60I, D121Y, K122E, D177E, I178M, Q207E, R211K, V245K, D250E, A272Q, L282C, R284K, T286A, I293VD
 OK_TC008003TC008003DQ079852NoneNone  E6ED, K11T, V35T, E40D, K122E, D123N, K173S, D177E, V179I, Q207A, R211S, V245K, D250E, A272P, K277R, L282C, R284K, T286A, I293V, D324ED
 OK_TC006803TC006803DQ079856NoneNone  E28A, V35T, T39A, E40D, V60I, D121H, K122E, I135T, I142V, D177E, I178M, E194D, G196E, Q197K, T200M, Q207E, R211K, I244V, V245K, D250E, A272S, L282C, T286A, I293VD
 OK_TC006403TC006403DQ079857NoneNone  V35T, E40D, K49R, V60I, K122E, I135T, D177E, I178M, T200V, Q207E, R211K, V245Q, D250E, A272P, K277R, L282C, I293V, E297Q, K311R, I329VD
 OK_TC005903TC005903DQ079858NoneNone  K22R, V35T, E40D, K49R, V60I, K122E, E169D, I195L, Q207E, R211RK, V245VE, D250E, V261VL, A272P, L282C, L283I, T286A, I293V, E300EA, K331KIND
Non-B Workgroup (2005)TK2009TK2009 NoneNone  V35T, E40D, V60I, D121Y, K122E, D177E, T200R, Q207G, R211K, K238R, V245E, D250E, A272PS, K275Q, K277R, Q278QH, L282C, T286A, I293V, P294AD
Saad (2005)SM_01YE38601YE386AY795903NoneNone  K11R, V35T, T39A, E40D, K49R, V60I, D121H, K122E, D123E, I135T, I142T, D177E, I178V, T200I, Q207E, R211K, F227S, V245K, D250E, A272P, K277R, L282C, T286A, I293V, G335D, P345Q, F346Y, R356K, T377Q, S379C, K390R, A400T, V435A, N447S, L452I, H483N, Q507H, S519N, A534S, A554N, I556V, V559ID
Jayaraman (2006)3-00-00653-00-0065 NoneNone  V35T, E40D, K49R, I50IV, V60I, D121H, K122E, D177E, Q207E, R211S, V245ED
 3-00-00683-00-0068 NoneNone V108IV35T, E40D, K49R, V60I, D121C, K122E, D177E, Q207E, R211K, I244V, V245ED
 3-00-01153-00-0115 NoneNone  V35T, E40D, K49R, V60I, K122E, I135T, D177E, I178M, Q207E, R211K, D218DE, I244V, V245E, D250ED
Marechal (2006)JF_092JF_092DQ443592NoneNone  V35T, E40D, K49R, V60I, D121H, K122E, K126R, I142V, D177E, T200K, Q207AD
Ojesina (2006)AIO_DDJ134AIO_DDJ134DQ273902NoneNone Y188HV35T, E36D, E40D, K49R, V60I, K122E, A158S, D177E, I178M, T200I, Q207G, R211K, V245K, D250E, A272P, K275R, Q278H, L282C, L283I, I293V, A327V, G335D, P345Q, F346Y, R356K, A360T, T377Q, K390R, A400T, A408V, E432DD
Santos (2006)C142RTC142RTDQ191033NoneNone Y181CE40D, K49R, I50V, V60I, D121H, Q174L, D177E, Q207ED
 RG167RG167DQ344020NoneNone  V35T, E40D, K49R, I50V, V60I, Q174L, D177E, I178V, Q207E, P243S, V245K, D250ED
Vidal (2006)NV_KIST13202.KIST132AM041030NoneNone  V35T, T39I, E40D, K49R, K122E, T165I, D177E, T200A, Q207E, P243S, V245Q, D250E, A272P, K311R, Q334H, M357T, A376T, K385R, K390R, A400T, T403I, V435ID
 NV_KS07502.KS075AM041009NoneNone  V35T, T39A, E40D, V60I, K122E, D123E, I142T, D177E, I178L, G196E, T200I, Q207E, R211K, F214L, V245K, D250E, A272P, K323Q, Q334N, G335S, R356K, M357V, T369A, A376C, T377L, T386I, K390R, A400T, T403VD
 NV_LBS03802.LBS038AM041035NoneNone  V35T, E40D, K49R, V60I, K122E, E169D, D177E, Q207E, R211K, I244V, V245K, D250E, A272P, Q278N, T286A, K311R, D324E, Q334D, M357T, K390R, A400T, E413D, V435ID
Baker (2007)9240KR03-9240KRAY803468NoneNone  V35T, E40D, K49R, V60I, D121H, K122E, T165I, D177E, T200I, Q207E, R211K, V245K, D250DE, A272S, K277R, Q278H, L282C, L283I, I293V, I329VD
 P0285P0285-070905EF186149NoneNone  I5V, E6D, V35T, T39R, E40D, I47L, K49R, V60I, D121Y, K122E, T139K, D177E, I178MV, T200TI, I202V, Q207E, R211K, I244V, V245T, E248Q, A272P, L282C, L283ID
 A1013MBA1013-090805EF186201NoneNone  K11Q, V35T, E40D, K49R, V60I, D121H, K122E, K166R, I178M, Q207E, R211K, V245T, D250E, A272S, K277R, L282C, L283I, T286A, I293V, E297GD
 A1031MBA1031-240805EF186209NoneNone  E6D, V35T, T39A, E40D, I47L, K49R, V60I, K122E, D123G, K173N, D177E, T200I, Q207G, R211K, V245K, A272P, L282C, L283I, T286A, A288T, I293V, P313TD
Brumme (2007)1075RT_1075EF369209NoneNone  V35T, E40D, K49R, V60I, D121DY, K122E, I159IV, D177E, T200I, Q207G, R211KD
 1602PRRT_1602EF368912NoneNone  V35T, E40D, K49R, V60I, V90I, K122E, D177E, I178M, T200V, Q207E, R211K, V245E, D250E, G262E, A272P, I274V, V276I, L282C, I293V, G335D, P345Q, F346Y, R356K, M357T, A360V, T377Q, S379C, K390RD
Church (2007)052-110957Q052EF612005NoneNone  E6P, V35T, E40D, K49R, V60I, K122E, I135T, D177E, I178M, T200I, Q207G, R211K, F214L, V245I, D250E, A272P, K275R, K277R, Q278H, K281R, L282C, T286AD
 061-111500X061EF612008NoneNone  V35T, E40D, K49R, V60I, D121Y, K122E, I135L, T139V, S162A, D177E, I178ILM, V189I, T200I, Q207G, R211K, V245M, A272P, K277R, L282CD
 086-114416P086EF612009NoneNone  V35T, E40D, V60I, K122KE, D177E, T200TI, Q207EG, R211K, V245Q, D250E, A272P, K277R, L282C, L283I, I293V, I326VD
 218-118871V218EF612016NoneNone  E28EA, V35T, E40D, K49R, V60I, K122E, D123N, I135T, S162A, T165X, D177E, Q207E, R211K, F214L, V245K, D250E, A272APS, K275KR, K277R, Q278QH, L282C, T286TA, V292VI, E297A, K311KR, I329IVD
 250-119815m250EF612018NoneNone  V35T, E40D, K49R, V60I, K102Q, K104R, D121Y, K122E, D177E, I178M, T200V, Q207G, R211K, V245K, D250E, A272PS, I274IV, K277R, L282CD
 470-126987m470EF612037NoneNone  K32I, V35T, E40D, K43KR, K49KR, V60I, D121CY, K122E, T165I, D177E, I178M, T200I, Q207G, R211K, V245IK, D250DE, A272P, K277R, Q278H, L282C, T286A, I293VD
 494-127521w494EF612044NoneNone  K11KR, V35T, E40D, K49R, V60I, K122E, D123DEG, I135RT, T139TA, D177E, I178IM, T200I, I202IV, Q207EG, R211K, V245Q, A272P, K277R, L282C, T286A, A288AG, I293V, K311KRD
 517-129070G517EF612054NoneNone  K20R, V35T, E40D, K49R, V60I, K104R, K122E, T139A, Q174R, D177E, I178M, T200I, Q207E, R211K, V245N, E248Q, D250E, A272P, K275R, V276I, Q278H, L282C, T286A, I293VD
 544-129978L544EF612061NoneNone  K32R, V35T, E40D, K49R, I50V, V60I, D121Y, K122E, D177E, I178M, T200I, Q207E, R211K, P243S, V245K, A272S, L282C, T286A, I293VD
 553-130284W553EF612063NoneNone  V35I, E40D, K49R, V60I, K102Q, D121Y, K122E, I135T, S162H, D177E, I178M, T200A, E204EK, Q207E, V245K, D250E, A272P, K277R, T286A, I293V, R307K, G333E, Q334YD
 586-131433R586EF612076NoneNone  V35T, T39R, E40D, K43Q, K49R, V60I, D121Y, K122E, K166KR, D177E, I178M, T200TI, Q207E, R211K, V245K, D250E, A272P, K277R, L282C, T286A, I293V, P294S, K311KR, P321PSD
 602-132594b602EF612078NoneNone  V35T, E40D, K49R, I50V, V60I, D121HY, K122KE, D123DN, I135T, T165TI, K166I, I178IM, T200I, I202IV, Q207G, R211K, V245K, D250E, A272P, K277R, L282C, L283I, T286A, I293VD
 612-132691o612EF612081NoneNone  V35T, E40D, K49R, V60I, D121H, K122E, D177E, I178M, T200I, E204EK, Q207E, R211K, P243S, V245K, K249Q, D250E, A272S, L282C, T286A, A288T, K311R, E312EQ, V317VAD
 620-132424Y620EF612084NoneNone  P4T, V35T, E40D, K49R, V60I, D177E, I178IM, T200I, Q207G, R211K, V245MT, D250E, A272P, K277KR, L282CD
 626-134055S626EF612088NoneNone  V35A, T39S, E40D, K49R, V60I, R83K, D177E, I178M, T200I, Q207E, R211K, V245K, D250E, A272P, K277R, L282C, L283I, T286A, I293VD
 642-132887E642EF612091NoneNone  V35T, E40D, K43N, K49R, V60I, D121H, K122E, D123E, I135R, D177E, I178M, T200I, Q207G, R211K, V245K, D250E, A272P, I274V, K277R, L282C, T286A, I329VD
 676-135396j676EF612103NoneNone  V35T, E40D, K49R, V60I, D121Y, K122E, T165I, D177E, I178M, T200I, Q207E, R211K, K238R, V245E, D250E, V276VI, K277R, K281KR, L282C, L283I, T286A, I293VD
 682-135474Y682EF612105NoneNone  V35T, T39N, E40D, K49R, V60I, D121Y, K122E, I135IL, I159IV, T165TI, D177E, Q207E, V245K, D250E, A272P, T286A, E297K, Q334HD
 683-134300Q683EF612106NoneNone  P4T, V8I, K11Q, V35T, T39I, E40D, K49R, V60I, K104R, D121Y, K122E, D123G, D177E, T200I, Q207D, R211K, V245E, D250E, A272P, K277R, L282C, E297KD
 743-138263I743EF612128NoneNone  V35T, E40D, K49R, V60I, D121Y, K122E, T165I, N175H, D177E, I178M, T200I, Q207E, R211K, V245K, D250E, K277R, L282C, T286A, I293V, S322L, D324ED
 748-140764t748EF612130NoneNone  K11R, V35T, E40D, K49R, V60I, K122KE, D123DN, D177E, I178M, T200I, Q207EG, R211K, V245KQ, D250E, A272AP, K277R, L282C, L283I, T286TA, I293V, K311KRD
 763-141319X763EF612136NoneNone  V35T, T39M, E40D, K49R, V60I, D121Y, K122E, I142V, D177E, T200I, Q207G, R211K, V245K, D250E, A272S, L282C, T286A, I293VD
 780-141912B780EF612143NoneNone  V35T, E40D, K49R, V60I, K122E, I135T, E169D, I178M, V189VI, T200I, Q207G, R211K, V245K, A272P, K277R, L282C, T286AD
 849-144966E849EF612167NoneNone  E28K, V35T, E40D, K49R, V60I, D121Y, K122E, D177E, I178M, V179I, T200I, Q207G, R211K, P243T, V245K, D250E, A272S, K277R, L282C, L283I, T286A, I293VD
Galluzzo (2007)M21130UG_M21130JQ220088NoneNone  E40D, K49R, V60I, L120L*, D121Y, K122E, D123G, I135T, T139A, E169ED, D177E, I178MV, V179I, T200I, Q207E, R211K, V245QD
 M22700UG_M22700JQ220092NoneNone  E40D, K49R, V60I, K64KR, D121H, K122E, D177E, I178IM, T200I, Q207E, R211K, V245KD
 M20230UG_M20230JQ220100NoneNone  T39L, E40D, V60I, W88C, D121Y, K122E, D123E, I135T, D177E, T200I, Q207E, R211K, F214L, V245QD
 M20810UG_M20810JQ220126NoneNone  E40D, K49R, V60I, V90I, I135I*LR, D177EG, I178IM, V179VGIS, T200R, Q207E, R211K, V245KD
von Wyl (2007)12610517835EF449780NoneNone  V35I, E40D, V60I, K102Q, K103KR, D121Y, K122E, I142IV, D177E, T200A, E204EK, Q207E, R211RKD
Delgado (2008)GH_056GH_056EU177926NoneNone  V35T, E40D, K49R, V60I, I135V, S162A, K173T, Q174K, D177E, T200S, Q207E, V245E, K281R, T286A, I293V, L295FD
 GH_247GH_247EU178072NoneNone  V8VI, V35T, T39A, E40D, K49R, V60I, R83K, D121H, K122E, I135T, D177E, I178MV, G196E, E204K, Q207E, V245E, A272P, T286A, V292I, I293VD
Holguin (2008)SP70-87285SP70-87285EU342768NoneNone  V35T, E40D, K49R, V60I, D121Y, K122E, D177E, T200A, Q207E, V245K, D250E, A272P, K277R, E297R, Q334ND
 SP35-87285SP35-87285EU342818NoneNone  V35T, E40D, K49R, V60I, D121Y, K122E, D177E, T200A, Q207E, V245K, D250E, A272P, K277R, E297R, Q334ND
Ibe (2008)175175AB356218NoneNone  V35T, E40D, V60I, K122E, D123DN, I142IT, D177E, I178L, I195L, T200I, Q207E, R211KD
Land (2008)ML2000ML2000EU110093NoneNone  V35T, E40D, K49R, V60I, K104KR, K122E, D177E, I178M, T200I, Q207EG, R211K, D250E, A272P, L282C, I293V, K311R, G335D, P345Q, F346H, R356K, M357T, A360T, T377L, S379C, K390R, A400T, H483K, L491S, S519N, Q524E, A534S, A554SD
Ndembi (2008)CMYD-5704CMYD-57DQ990422NoneNone  P4T, V35T, E40D, K49R, V60I, V118I, T139S, S162C, E169D, D177E, I178L, G196E, T200A, E204K, Q207E, R211K, F214L, H221P, Q222E, K223RD
Ndembi (2008)IAEAM009IAEAM009EU306748NoneNone  D17E, V35T, T39M, E40D, V60I, Q207E, R211KD
 IAEM026IAEM026EU306760NoneNone  E6N, V8I, V35T, E40D, K49R, V60I, K122E, D177E, Q207ED
 IAEM030IAEM030EU306762NoneNone  V35T, T39I, E40D, K49R, V60I, D123E, T139K, I142T, E169D, D177E, I178M, T200I, Q207G, R211KD
 IAEM034IAEM034EU306765NoneNone  V35T, E40D, K49R, V60I, D121Y, K122E, E169D, D177E, Q207E, R211KD
 IAEM047IAEM047EU306774NoneNone  V35T, E40D, V60I, K122E, D123G, I135T, D177E, T200I, Q207E, R211KD
 IAEM048IAEM048EU306775NoneNone  K20R, V35I, E40D, K43R, V60I, D121Y, K122E, D123E, I159V, K173S, Q174K, D177E, I178M, Q197K, T200I, Q207E, W239LD
 IAEM074IAEM074EU306791NoneNone  K11T, V35T, E40D, V60I, D177E, I178M, Q207K, R211KD
Nyombi (2008)TBK014TBK014EU251723NoneNone  V35T, E40D, K49R, V60I, K122E, D123N, D177E, T200I, Q207G, R211K, V245K, D250E, K277R, L282C, R284K, T286A, V292I, I293VD
 TBK020TBK020EU251727NoneNone  V35T, E40D, K49R, V60I, K122E, D177E, I178M, T200I, Q207E, R211K, V245K, D250E, A272P, L282C, T286A, I293VD
 TBK025TBK025EU251731NoneNone  V35T, E40D, K49R, V60I, K122E, D123N, D177E, T200I, Q207G, R211K, V245K, D250E, K277R, L282C, R284K, T286A, I293V, L310XD
 TBK074TBK074EU251761NoneNone  V35T, E40D, K49R, V60I, K122E, Q174H, D177E, G196E, Q197QP, T200Q, Q207E, V245E, D250E, A272P, K277R, L282C, L283I, T286A, A288V, I293V, E297K, R307K, Q334N, G335DD
 TBK080TBK080EU251767NoneNone  I5V, V35T, E40D, I47L, K49R, V60I, D121Y, K122E, E169D, D177E, T200R, Q207E, R211K, P243PS, V245K, K249KQ, D250E, S251DN, A272P, K277R, L282C, L283I, T286A, I293V, G335D, P345Q, F346Y, R356K, A360TD
 TBK085TBK085EU251768NoneNone  V35T, E40D, K49R, V60I, D121H, K122E, D123S, T165I, Q174N, I178L, T200M, Q207E, R211K, K238R, I244V, V245R, D250E, A272P, T286A, E291D, V292I, I293V, E312DD
 TMS004TMS004EU251785NoneNone  V35I, E40D, K49R, V60I, K122E, D123GS, I135T, I178M, T200K, Q207E, R211K, D250E, A272S, L282C, T286A, V292I, I293V, K311R, G335D, P345Q, F346HD
 TMS005TMS005EU251786NoneNone  V35I, E40D, K49R, V60I, D121H, K122E, D123G, I135T, I178M, T200V, E204K, Q207E, R211K, D250E, A272S, L282C, T286A, V292I, I293V, K311R, G335D, P345Q, F346Y, R356K, M357ND
 TMS017TMS017EU251796NoneNone  V35T, E40D, K49R, V60I, D121Y, K122E, D123G, K173Q, D177E, T200I, Q207G, R211K, V245E, D250E, A272P, K277R, L282C, T286A, I293V, K311R, G335DD
 TMS106TMS106EU251809NoneNone  V21I, V35T, T39I, E40D, K49R, V60I, D121C, K122E, T139I, D177E, I178M, G196E, T200I, Q207G, R211K, V245T, D250E, V276I, L282C, L283I, I293VD
 TMS117TMS117EU251817NoneNone  V35T, E40D, K49R, V60I, D121HY, K122E, I135R, N137S, D177E, I178M, T200I, I202V, Q207G, R211K, K238R, V245T, E248A, A272P, K277R, L282C, L283I, I293V, G335D, F346Y, R356K, G359S, A360T, T369A, A376S, T377QD
 TMS220TMS220EU251853NoneNone  V35T, E40D, K49R, V60I, D121Y, K122E, D123G, I142V, Q174R, D177E, I178M, T200R, E204D, Q207E, R211K, V245N, D250E, A272P, K277R, L282C, L283I, I293V, E297D, D320DN, I329L, G335D, P345Q, F346YD
Aghokeng (2009)CYN1003CYN1003GU191593NoneNone  K11Q, P14A, V35T, E40D, V60I, V118I, K122P, D123K, T139S, S162C, D177E, I178L, V179I, E204K, Q207E, F214L, V245T, D250E, A272P, K277GR, T286A, E297K, Y339W, M357T, A376S, T377M, K390R, T403MD
 HU_0172HU_0172GU191678NoneNone  V35T, E40D, K49R, V60I, S162C, D177E, I178L, G196E, Q207EG, R211KT, V245KQ, E248ED, D250DE, S251SDGN, A272P, I274IV, K275R, Q278QH, K281R, E291D, V292I, I293V, E297A, K311R, V317A, Q334QHD
Ayouba (2009)RES225RES225-8RTGQ351791NoneNone  V35T, E40D, K49R, V60I, D121Y, K122E, I135M, S162C, T165I, K173N, D177E, V179I, Q207A, P243T, V245Q, E248DD
Bartolo (2009)HM17601AOHM176EU068391NoneNone  K20R, L34I, V35T, T39Q, E40D, K49R, V60I, D121C, K122E, D177E, I178V, E204Q, Q207E, R211K, F214L, I244V, V245K, D250E, A272P, Q278H, K281R, T286A, I293V, E297RD
 SNS3301AOSNS33EU068442NoneNone  K20R, V35T, T39I, E40D, K49R, N54K, V60I, D86N, D121Y, K122E, Q174N, D177E, T200A, Q207E, V245M, D250E, A272P, K277R, T286A, E297KD
Eshleman (2009)G49070R907-156545FJ389052NoneNone  V35T, T39A, E40D, K49R, V60I, K102KQ, I135IATV, I142V, I159IV, D177E, E194D, Q207E, R211K, V245K, D250E, A272P, K275R, K277KR, Q278HN, L282C, T286A, E291EA, I293IVD
 E40578W107-156559FJ389054NoneNone  V35T, E40D, V60I, D177E, G196E, T200I, Q207E, R211K, V245Q, E248N, A272P, V276I, L282C, L283I, T286A, A288T, I293VD
 B03497W207-156906FJ389060NoneNone  V35T, E40D, K49R, V60I, D177E, I195L, T200I, Q207E, R211K, V245E, D250E, A272P, K277R, L282C, T286A, I293VD
 B08298B607-156912FJ389062NoneNone  V35M, T39A, E40D, K43T, K49R, V60I, S68N, D121Y, K122E, D123E, I159V, D177E, G196E, T200I, Q207G, R211K, V245K, D250E, A272P, V276VI, K277KR, L282C, L283I, T286A, I293VD
 B20757W307-156919FJ389063NoneNone  I5V, V35I, E40D, K49R, V60I, D121Y, K122E, D177E, I178M, T200I, Q207G, R211K, V245E, A272P, K277R, L282C, L283I, I293VD
 C10111W307-156980FJ389086NoneNone  V35T, E40D, K49R, V60I, K122E, D123G, D177E, I178M, T200I, Q207G, R211K, V245K, A272Q, K277R, L282C, T286A, I293VD
 F20947R907-156983FJ389089NoneNone  K13R, V35T, T39R, E40D, V60I, D121H, K122E, I135R, D177E, Q207G, R211K, V245T, D250E, A272S, V276I, L282C, T286A, I293V, A304ED
 F35636W307-156984FJ389090NoneNone  V35T, E40D, K49R, V60I, T69TS, K122E, I142IT, D177E, I178MV, T200I, Q207G, R211K, V241I, V245K, D250E, A272P, L282C, T286A, I293VD
 C03919W207-156988FJ389093NoneNone  V35T, E40D, K49R, V60I, I159IV, S162SC, D177E, I195L, T200I, Q207E, R211K, V245E, D250E, A272P, K277R, L282C, T286A, I293VD
 K13668W307-156999FJ389101NoneNone  V35T, T39M, E40D, K49R, V60I, K104R, E169D, D177E, I178M, V179VI, Q207E, R211K, V245K, A272P, K277R, L282C, L283I, T286S, I293VD
 J10167W308-101511FJ389112NoneNone  P14S, K32R, V35T, E40D, K49R, V60I, D121Y, K122E, I135T, T139I, D177E, T200I, Q207G, R211K, K238R, I244V, V245K, E248D, D250E, A272P, K277R, K281R, L282C, L283I, T286A, I293VD
 J45014W308-101543FJ389117NoneNone  V35T, E40D, K49R, V60I, K122E, I135T, S162SN, D177E, T200I, Q207G, R211K, V245K, D250E, A272P, K281KR, L282C, L283I, T286AD
 J49527R908-101550FJ389119NoneNone  V35T, T39TA, E40D, V60I, E138A, T139A, I142V, D177DE, I178M, V179I, G196E, Q207E, R211K, F214L, V245T, D250E, A272P, K275KR, K281KR, L282C, V292I, I293VD
 K31818R908-101584FJ389131NoneNone  V35T, E36D, E40D, K49R, V60I, D121H, K122E, D177E, T200I, Q207E, R211K, V245E, D250DEKN, A272S, K275Q, K277R, L282C, T286A, I293VD
 K09738W208-102645FJ389136NoneNone  V35T, T39I, E40D, V60I, D177E, I178M, T200I, Q207E, V245K, D250E, A272Q, V276I, L282C, L283I, I293VD
 A06734R908-102647FJ389138NoneNone  V35T, T39I, E40D, K49R, V60I, K122E, D123N, I135T, S162C, D177E, Q207G, R211K, V245K, A272S, K281R, L282C, L283I, T286AD
 C08508W108-102848FJ389143NoneNone  E6K, K11N, V35T, E40D, K49R, V60I, D121H, K122E, I135T, S162C, D177E, I178M, T200E, Q207G, R211K, V245Q, D250E, A272P, K277R, L282C, L283I, I293VD
 E21365W208-102874FJ389148NoneNone  V35T, E40D, K43R, K49R, V60I, D121H, K122E, I135T, S162C, D177E, I178M, T200I, Q207G, R211K, V245K, D250E, S251C, A272P, K277R, L282C, A288T, I293VD
 E35635W308-102880FJ389149NoneNone  V8VI, V35T, E40D, K49R, V60I, K122E, D177E, I178M, T200I, Q207G, R211K, V241I, V245K, D250E, A272P, L282C, T286A, I293VD
Kousiappa (2009)CY007CY007EU673377NoneNone  V35T, E40D, K49R, V60VI, K122E, I135T, S162C, R172K, D177E, I178L, T200A, E204K, Q207E, F214L, V245T, D250E, S251N, A272P, K277R, T286A, V292I, I293VD
Smith (2009)CR223US2007CR223 NoneNone  P4T, I5V, K20R, V35T, T39A, E40D, K49R, V60I, T107S, V111VI, A158S, T165I, K173KR, Q207E, F214L, V245Q, D250E, A272P, K277R, T286AD
Vercauteren (2009)pt18811dcpCYriD6GQ399143NoneNone  V35T, E40D, K49R, V60I, D177E, T200I, Q207G, R211K, V245T, D250E, A272P, K275R, K277KR, Q278QH, L282CD
 pt17083124576130GQ399316NoneNone  E6ED, V35T, E40D, K49R, V60I, K65KI, D121H, K122E, D177E, I178M, T200I, I202IV, Q207G, R211K, V245Q, D250E, A272P, K277R, L282C, L283I, I293V, P294PS, Q334KD
 pt12685588432246GQ399756NoneNone  P4PT, E6ED, K20R, L34I, V35T, T39L, E40D, K49R, V60I, D121C, K122E, K173R, D177E, I178V, T200TI, E204Q, Q207E, R211K, F214L, I244V, V245K, D250E, A272P, Q278H, K281R, T286A, I293V, E297K, S322L, E328DD
 pt9537525840619GQ400071NoneNone  V8VI, V35T, E40D, K49R, I50V, V60I, K122E, D123DN, I135T, T165I, D177E, I195IL, Q207E, F214L, V245T, D250E, A272P, T286A, E297K, I329LD
 pt6199284682202GQ400405NoneNone  V8I, V35T, E40D, K49KR, I50V, V60I, T165I, D177DE, T200A, Q207E, R211RK, F214L, V245T, D250E, A272P, T286TA, E297K, K311KT, V317VA, S322T, I329LD
Castelbranco (2010)090031A090031AHM357747NoneNone G190AT39I, E40D, K49R, I50V, V60I, D121C, K122E, T165I, Q174R, D177E, I178L, V179I, T200TA, E204Q, Q207E, R211K, F214L, I244V, V245KD
Descamps (2010)187odyssee187odysseeHQ718020NoneNone  E40D, K49R, V60I, V118VM, K122V, D123N, I135T, D177E, I202V, E204D, Q207E, R211K, F214L, V245ND
 225odyssee225odysseeHQ718058NoneNone  V35T, E40D, K49R, V60I, D121H, K122E, E169EK, D177E, T200I, Q207E, R211K, V245K, D250E, A272P, L282C, L283I, R284K, I293LD
 313odyssee313odysseeHQ718146NoneNone  V35T, E40D, K49R, V60I, V106VI, K122R, D123E, E169D, D177E, I178L, T200A, E204K, Q207E, F214LD
 566odyssee566odysseeHQ718399NoneNone  E40D, K49R, V60I, D121Y, K122E, I135R, S162A, D177E, T200A, E204N, Q207E, R211K, V241I, V245QD
Diop-Ndiaye (2010)160HALD160HALDFN599689NoneNone  V35T, T39A, E40D, K49R, V60I, K122E, I135R, E169D, D177E, I178V, T200A, I202V, E204K, Q207E, R211K, F214L, V245T, D250E, A272P, K277R, Q278N, T286A, E297K, I329L, R356K, T369A, I375V, T377Q, S379C, K390R, A400T, T403I, E404DD
Mosha (2010)S9PolS9PolJQ071457NoneNone  V35T, E40D, K49R, V60I, E169D, D177E, T200V, Q207E, R211K, V245T, D250E, K277R, L282C, I293V, E312D, G335E, P345Q, F346Y, R356K, M357L, K366R, T377Q, S379C, T386I, K390R, A400TD
 S27PolS27PolJQ071472NoneNone  V35T, E40D, K43R, K49R, V60I, K122E, I142K, T165I, D177DE, I178M, T200M, Q207E, R211K, V245K, D250E, G262A, A272P, K277R, L282C, L283I, G285E, T286A, I293V, G335D, P345Q, F346H, M357L, A376T, W383G, K390R, A400T, T409HD
Towler (2010)348266-T348266-THM037858NoneNone  V35T, E40D, K49R, V60I, D121H, K122E, D177E, I178M, Q207E, R211K, V245K, D250E, I257L, A272P, K277R, L282C, T286A, V292VI, I293V, E297QD
 366925-C366925-CHM037861NoneNone  V35T, T39A, E40D, K49R, V60I, V118VI, D121HY, K122E, I135T, I142IT, D177E, I178M, L193LF, T200I, Q207EG, R211K, V245K, D250E, A272P, L282C, L283I, I293V, K311R, P321TD
 396075-Q396075-QHM037868NoneNone  E6D, V35T, E40D, V60I, K122E, D123S, I135T, D177E, V179I, T200I, Q207A, R211S, V245K, D250E, A272P, K277R, L282C, T286A, L295LR, E297KD
 427985-P427985-PHM037875NoneNone  V35T, E40D, K49R, V60I, K104R, K122KE, D123DEKN, A158AS, E169D, K173R, D177E, E194D, T200I, Q207E, R211K, V245N, D250E, A272P, K275R, K277R, Q278H, L282C, V292ID
 449280-S449280-SHM037880NoneNone  V35T, E40D, K49R, V60I, K122KE, D177E, I178M, V189I, T200M, Q207E, V245K, D250E, A272P, K275R, Q278H, L279I, L282C, T286A, P294SD
Yang (2010)20106934442010693444JQ616884NoneNone  K20R, K32KR, L34I, V35T, T39L, E40D, K49R, V60I, D123E, D177E, I178V, I202IV, E204Q, Q207E, R211K, F214L, I244V, V245IK, D250ED
Aghokeng (2011)HJ1611HJ1611JN639523NoneNone  P4T, I5IV, V35T, E40D, K49R, V60I, V118I, K122E, I135IV, T139S, S162C, E169D, D177E, I178L, T200A, I202V, E204K, Q207E, F214L, V245T, E248D, A272P, K277KR, K281KR, T286A, E297KR, K311KR, Y339WD
 SK1002-PISK1002-PIHQ864352NoneNone  V35T, E40D, S48SP, K49R, V60I, V118I, K122E, D123E, I135T, E138A, S162C, E169ED, R172K, Q174QR, D177DE, I178L, Q182S, T200E, Q207E, R211K, F214L, P243T, V245T, D250E, A272P, K275R, V276T, Q278HN, K281KR, T286A, P294PS, E297K, A304E, K311RD
 SK3005-PISK3005-PIHQ864378NoneNone  K20R, T27TS, V35T, E40D, K49R, V60I, I135T, E138EG, S162C, R172K, D177E, I178L, V179I, Q182S, T200A, E204Q, Q207E, R211K, F214L, V245KD
Charpentier (2011)patco_28patco_28HQ021417NoneNone  V35IT, E36ED, T39TA, E40D, K49R, V60I, K122E, D123N, I135RT, K173N, Q174QHKN, D177E, T200A, Q207E, R211RKD
Hamers (2011)CP076301528CP076301528HQ993574NoneNone  P4H, K20KR, V35T, E40D, K49KR, V60I, D121Y, K122E, D177E, I178M, Q207G, R211K, V245M, L282C, L283I, R284K, T286TAIV, A288AT, I293V, E297ELQV, K311RD
 CP076301551CP076301551HQ993594NoneNone  V35T, T39TA, E40D, V60I, D121H, K122E, I142V, D177E, T200I, Q207E, R211K, K238R, V245E, D250E, A272P, K277R, L282C, T286A, I293V, E298G, E305DD
 CP076301557CP076301557HQ993599NoneNone  V8I, V35T, T39M, E40D, K49R, E53D, V60I, K122E, I135M, D177E, I178L, Q207E, V245E, A272P, L283I, E297K, I329VD
 CP076301559CP076301559HQ993601NoneNone  V35T, E40D, K49R, V60I, K122E, D123E, D177E, I178IM, T200I, Q207E, R211K, I244V, V245I, D250E, K281R, L282C, L283I, R284K, T286A, I293VD
 CP076301621CP076301621HQ993657NoneNone  E6D, K11KN, V35T, E40D, K49R, V60I, D121H, K122E, I135T, S163ST, D177E, V189VI, Q207EG, R211K, V245K, D250E, A272S, K277R, K281R, L282C, L283I, T286A, I293V, K311R, L325I, I329VD
 CP076301659CP076301659HQ993663NoneNone  V35T, E40D, K49R, V60I, K122E, D123E, D177E, I178M, T200A, Q207G, R211K, V245K, D250E, A272P, K275R, Q278N, L282C, L283I, T286A, I293V, E308V, I309X, I329VD
 CP076301702CP076301702HQ993697NoneNone  V35T, E40D, V60I, I142V, D177E, I178L, Q207E, R211K, V245Q, E248N, A272P, K281R, T286A, E291D, V292I, E297K, A304E, E312DD
 CP076301706CP076301706HQ993701NoneNone  E6D, K11KN, V35T, E40D, K49R, V60I, D121H, K122E, I135T, D177E, V189VI, T200TR, Q207G, R211K, V245K, D250E, A272S, K277R, K281R, L282C, L283I, T286A, I293V, K311R, L325I, I329VD
 CP076301767CP076301767HQ993753NoneNone  V21VI, V35T, T39AS, E40D, K49R, V60I, K82KR, D177E, T200I, Q207DEKN, R211K, F214FL, V241ID
 CP076302284CP076302284HQ993834NoneNone  V35T, E40D, K49R, V60I, K64KR, K122E, D123N, I135T, D177E, I178V, T200A, Q207E, R211K, E248D, S251N, A272P, K277R, L283I, V292I, I293V, E297K, R307K, I326V, Q334N, G335DD
 CP076302306CP076302306HQ993852NoneNone  E6D, V35T, E40D, K49R, V60I, Q145C, D177E, I178L, V179I, T200TAIV, Q207E, R211K, P243AS, V245E, D250DE, A272P, K277R, L282C, L283I, A288T, I293VD
 CP076304185CP076304185HQ993896NoneNone K101E, E138KP4T, V35T, E40D, K43KR, K49R, V60I, V118I, K122E, I142V, E169DGNS, D177E, I178IMV, G196E, I202V, Q207E, R211K, F214L, V245E, E248D, D250E, L282C, L283I, I293VD
 CP076304226CP076304226HQ993921NoneNone  P4H, E6D, V35T, E40D, K49R, V60I, K122E, I135V, T139AV, I159IV, K173Q, D177E, T200I, I202V, Q207E, R211K, V245K, D250E, A272Q, L282C, T286AD
 CP076300721CP076300721HQ994924NoneNone K101E, E138KV35I, E40D, K49R, V60I, K122E, I135T, I142T, T165I, Q174QR, D177E, I178IM, V179I, G196KR, T200I, I202V, Q207E, R211K, V245Q, A272P, K277R, L282C, L283LI, T286A, A288G, I293VD
 CP076300886CP076300886HQ994966NoneNone  V35T, T39A, E40D, K49R, K122E, D123S, D177E, I178M, T200A, Q207E, R211RK, V245Q, D250E, A272P, K277R, Q278H, L282C, L283I, I293VD
 CP076300893CP076300893HQ994968NoneNone  V35T, E40D, K49R, V60I, K102Q, D123E, I142IV, S162A, D177E, I195L, G196E, Q207E, V245T, E248D, D250DE, A272P, L282C, L283ID
 CP076301791CP076301791HQ994973NoneNone  K20R, V35T, E40D, K49R, V60I, K122E, D177E, T200I, Q207E, R211K, K238KR, V245E, D250E, A272P, K277R, L282C, L283I, I293VD
 CP076301803CP076301803HQ994977NoneNone  K20R, V35T, E40D, K49R, V60I, K122E, D177E, T200I, Q207E, R211K, K238KR, V245E, D250E, A272P, K277R, L282C, L283I, I293VD
 CP076301836CP076301836HQ994987NoneNone  V35T, E40D, K49R, V60I, D121DY, K122E, E169D, K173E, D177E, I178M, T200A, Q207E, R211K, E248D, A272S, L282C, L283I, T286A, I293VD
 CP076301851CP076301851HQ994993NoneNone  V35T, E40D, K49R, V60I, S162A, E169D, D177E, T200I, Q207E, R211K, V245K, K249Q, A272P, L282C, T286A, E297EAD
 CP076301872CP076301872HQ995004NoneNone  V35I, E40D, S48T, V60I, D121H, K122E, E138A, T200I, Q207K, R211K, V245K, D250E, A272P, K277R, L282C, L283I, A288G, I293VD
 CP076302052CP076302052HQ995021NoneNone  V35T, T39A, E40D, V60I, D121Y, K122KE, D123E, S162C, F171Y, D177E, I178M, T200A, E204EK, Q207A, R211S, V245L, D250E, A272P, K277R, L282C, L283I, I293VD
 CP076302993CP076302993HQ995065NoneNone  V35T, E40D, V60I, E138A, I142IV, Q174K, I178M, V179I, Q207E, R211RK, V245K, A272P, K277R, Q278H, L282C, I293VD
 CP076303008CP076303008HQ995073NoneNone  V35T, T39EK, E40D, V60I, D121Y, K122E, S162C, D177E, G196E, T200M, Q207E, R211K, V245Q, A272S, K277R, L282C, L283I, T286A, I293V, P294TD
 CP076300870CP076300870HQ995128NoneNone  V35T, T39N, E40D, K49R, V60I, D121Y, K122E, E169D, D177E, I178M, Q207A, R211K, V245Q, E248D, D250E, A272P, T286A, E291D, V292I, I293VD
 CP076300892CP076300892HQ995140NoneNone  V35T, E40D, K49R, V60I, D177E, I178M, I195IL, T200A, Q207E, R211K, V245Q, D250E, A272P, K277R, L282C, L283I, E297KD
 CP076302972CP076302972HQ995218NoneNone  V35T, E40D, K49R, V60I, D123E, Q174K, D177E, I178M, Q207E, R211K, V245Q, D250N, A272P, K277R, L282C, L283I, T286A, I293V, E297AD
 CP076303042CP076303042HQ995226NoneNone  V35T, T39A, E40D, V60I, K102Q, D121H, K122E, I142T, D177E, I178M, V189I, T200I, Q207E, R211K, V245T, E248Q, D250E, A272P, K275R, Q278H, L282C, T286A, V292I, I293V, E297AD
 CP076303092CP076303092HQ995269NoneNone  V35T, E40D, K49R, I50V, E53D, V60I, K122E, D123S, I135T, T165TI, D177E, I195IL, T200R, Q207E, R211K, I244V, V245K, K249KQ, D250DE, A272P, L282C, T286TA, A288T, I293VD
 CP076303105CP076303105HQ995281NoneNone  V35T, E40D, K49R, V60I, D121Y, K122Q, T165I, D177E, I178M, Q207E, R211K, V245Q, D250E, A272S, T286AD
 CP076303123CP076303123HQ995297NoneNone  V35T, E40D, K49R, V60I, D121H, K122E, D123GS, I135T, T200V, Q207N, R211K, V245K, E248D, A272P, K277R, L282C, I293VD
 CP076303124CP076303124HQ995298NoneNone  V35T, E40D, K49R, V60I, K122E, D123N, I135T, S162C, K173A, Q174K, D177E, Q207A, R211S, V245E, A272P, K277R, L282C, L283I, T286A, P294AD
 CP076300703CP076300703HQ995310NoneNone  E6D, V35T, E40D, K49R, V60I, D121Y, K122E, E169D, D177E, T200E, Q207E, V245K, D250E, A272S, K277R, T286A, I293VD
 CP076300772CP076300772HQ995340NoneNone  V35T, E40D, K43R, K49R, V60I, K122E, D123N, I142T, D177E, V189I, T200A, Q207EG, R211K, V245Q, A272P, K277KR, T286AD
 CP076300773CP076300773HQ995341NoneNone  V35T, E40D, K49R, V60I, D121Y, K122E, D177E, T200I, Q207G, R211K, V245Q, E248D, D250E, K277R, L282C, T286A, I293VD
 CP076301899CP076301899HQ995378NoneNone K103NV35T, E40D, K49R, V60I, K122E, I142V, D177E, I178M, T200I, Q207K, R211Q, V245Q, E248D, D250E, A272P, T286A, I293V, E297DD
 CP076301919CP076301919HQ995391NoneNone  V35T, E40D, V60I, D121Y, K122E, N136D, S162A, D177G, Q207E, R211K, V245Q, D250E, K277R, T286AD
 CP076301953CP076301953HQ995418NoneNone  V35T, E40D, K49R, V60I, K122E, D123S, S162C, D177E, I178IM, I195L, T200M, Q207E, R211K, V245K, D250E, A272P, K277R, L282C, L283I, I293V, E297VD
 CP076301958CP076301958HQ995423NoneNone  V35T, E40D, K49R, V60I, K122E, S162C, D177E, I178M, T200M, E204K, Q207E, R211K, V245T, D250E, A272S, K277R, L282C, L283I, T286A, I293VD
 CP076301961CP076301961HQ995425NoneNone  V35T, T39A, E40D, K49R, V60I, K122E, I142T, T165I, N175H, D177E, I178M, Q207E, R211K, V245K, D250E, A272P, K277R, T286TA, I293VD
 CP076301968CP076301968HQ995432NoneNone  V35T, E40D, K49R, V60I, K122E, D123E, E138A, T165I, D177E, T200I, Q207E, R211K, F214L, V245K, D250E, A272P, K277R, L282C, T286A, I293VD
 CP076301983CP076301983HQ995444NoneNone  V35T, E40D, K49R, V60I, D123E, I142V, D177E, I178L, V179I, I195L, T200I, Q207E, R211K, V245K, D250E, A272S, V276I, L282C, L283I, A288TD
 CP076302078CP076302078HQ995462NoneNone V108IV35T, T39S, E40D, K43E, K49KR, V60I, K104N, K173L, Q174K, D177E, V179I, V189I, Q207A, L210F, R211S, V245Q, E248D, D250E, A272P, L282C, T286A, A288AT, V292I, I293VD
 CP076302894CP076302894HQ995467NoneNone  V35T, T39R, E40D, K43E, K49R, V60I, K122E, N136NDGS, D177E, V189I, T200I, Q207E, R211K, V245K, D250E, A272S, K277R, L282C, I293VD
 CP076302895CP076302895HQ995468NoneNone  V35T, E40D, K49R, V60I, K122E, E169D, D177E, T200A, Q207E, I244V, V245Q, D250E, A272P, K277R, L282C, R284K, T286A, I293VD
 CP076302897CP076302897HQ995469NoneNone  V35T, E40D, K49R, V60I, K122E, T165I, I178M, I195L, T200I, Q207E, R211K, V245K, A272S, L282C, L283I, I293VD
 CP076302934CP076302934HQ995490NoneNone  V35T, T39A, E40D, V60I, D121H, K122E, I135T, I142V, Q174H, D177E, I178M, V179I, Q197L, T200I, K201R, Q207G, R211K, H221Y, V245H, D250E, A272P, K277R, L282C, T286A, E297AD
Kasang (2011)3264232642HM572336NoneNone  V35T, T39TI, E40D, K43KR, K49R, V60I, D121Y, K122E, D177E, I178M, V179I, I195IL, T200L, Q207E, R211K, K238R, V245K, D250E, A272P, K275R, K277R, L282C, T286I, V292VI, I293V, E308EAD
 3265432654HM572337NoneNone  K20R, V35T, E40D, K49R, V60I, K104R, K122E, K173KN, Q174QKR, D177DE, I178MV, Q207E, R211K, P243T, V245K, D250E, A272Q, L282C, K311RD
 1717117171HM572342NoneNone  I5IV, E6EA, K11KQ, V35T, T39N, E40D, K43KR, K49KR, I50IF, V60I, D121Y, K122E, T139TA, S162SN, E169D, D177E, I178M, T200I, Q207E, R211K, V245K, K249KR, D250E, A272S, K275KQ, L282C, T286A, E291EA, I293V, E297EAKT, K323ND
 60176017HM572349NoneNone  K11KE, V35T, E36D, T39K, E40D, K49R, V60I, D121H, K122E, D123S, D177E, T200I, K201KR, Q207E, R211K, K220KN, M230MI, V245K, D250E, V276VIM, K277R, L282C, L283I, T286A, I293VD
 1719317193HM572354NoneNone Y188YHV35T, E40D, K49R, V60I, K122E, D123N, D177E, T200I, Q207E, R211K, V245E, D250E, A272P, K277R, L282C, T286A, E291A, I293V, S322AD
 20242024HM572357NoneNone  V35T, E40D, K43KR, K49R, V60I, R72RK, K122E, D123S, I135T, E169D, D177E, I178M, G196E, T200A, Q207E, R211K, V245K, D250E, A272P, K275KR, K277R, Q278N, K281R, L282C, L283I, T286A, I293V, P294PS, K323KR, D324E, I329VD
 3265032650HM572361NoneNone  V35T, E40D, K49R, V60I, K103KE, K173A, D177E, T200A, Q207E, R211K, V245Q, D250E, S251C, A272S, V276VI, K277R, L282C, L283I, I293V, P294T, S322AD
 20312031HM572378NoneNone  V35T, E40D, K49KR, V60I, K122E, D123NS, I135T, E169EA, K173AS, Q174K, D177E, I178IV, V179I, G196E, Q207A, R211S, V245VI, D250E, A272P, K277R, L282C, L283LI, T286A, V292VI, I293VD
 2328923289HM572422NoneNone  V21I, V35T, T39TA, E40D, G51GR, W88W*, K122E, D123N, K126KR, A158AS, T165TI, K173S, D177E, V179I, T200TS, I202V, E204ED, Q207AV, R211RKNS, V245K, D250E, W266W*, A272P, K277KR, L282C, L283I, I293V, I326VD
Ndembi (2011)NTCPS725NTCPS725HQ702621NoneNone  V35T, E36D, E40D, K49R, V60I, K104R, D121Y, K122E, D123E, D177E, I178M, T200I, Q207E, R211KD
 NTCPS723NTCPS723HQ702623NoneNone  E6D, K11I, V35T, E40D, V60I, K122E, I135T, T165I, I178L, Q207E, R211KD
 NTCPS721NTCPS721HQ702625NoneNone  E28K, K32E, V35T, E40D, V60I, Q174K, D177E, I178M, T200A, Q207A, R211SD
 AICPS437AICPS437HQ702637NoneNone  V35T, E40D, K49R, V60I, D121Y, K122E, D123E, D177E, T200I, Q207E, R211KD
 NTCPS728NTCPS728HQ702642NoneNone K101EE6K, K20R, V35T, T39A, E40D, V60I, K122E, E138A, S163T, M164L, E169K, K173L, Q174K, I195S, L205S, Q207E, F214LD
 AICPS339AICPS339HQ702643NoneNone  V35T, T39A, E40D, K49R, V60I, D121Y, K122E, D123E, I135T, I142V, D177E, V179I, T200I, Q207E, R211KD
 AICPS247AICPS247HQ702654NoneNone  V35T, E40D, K49R, I50V, V60I, K104Q, K122E, D123S, I142V, P170H, Q174R, Q207E, R211KD
 AICPS181AICPS181HQ702658NoneNone  V35T, E40D, K43R, V60I, D121H, K122E, D123E, I142V, D177E, I178M, T200I, Q207G, R211KD
 NTCPS704NTCPS704HQ702666NoneNone  I31V, V35T, T39I, E40D, K49R, V60I, K122E, D123G, I135T, I142M, K173T, Q174K, D177E, Q207A, R211S, F214LD
 AICPS155AICPS155HQ702673NoneNone  V35T, E40D, K49R, V60I, I142N, D177E, Q207E, R211KD
 UGNTC713UGNTC713HQ702683NoneNone  V35T, E40D, K49R, V60I, K122E, D123T, I135T, K166T, T200A, I202V, Q207E, R211KD
Delwart (2012)479-2547-7479-2547-7JN215097NoneNone  V35T, E40D, K49R, V60I, K122E, E169D, D177E, T200A, Q207E, V245T, E248N, S251I, A272S, K277R, T286AD
Frange (2012)751407KNX751407KNXJQ292223NoneNone  T39A, E40D, V60I, D121Y, K122E, I135M, S162A, D177E, I178V, T200A, E204D, Q207A, V241ID
 751202DRS751202DRSJQ292224NoneNone  E40D, K49R, V60I, D121Y, K122E, I135R, S162A, D177E, T200A, E204N, Q207E, V241ID
 600102MKDG600102MKDGJQ292225NoneNone  V35T, E40D, K49R, V60I, D121Y, K122E, I135R, S162A, D177E, T200A, E204N, Q207E, R211K, V241I, V245Q, D250ED
 330224QWQ330224QWQJQ292228NoneNone  T39A, E40D, K49R, V60I, R83K, D123E, T139S, S162C, R172K, D177E, I178L, V179T, Q182S, T200A, E204K, Q207E, R211K, F214LD
Hassan (2012)RS09000889RS09000889HQ441634NoneNone  V8I, K11KQ, V35T, E40D, K49R, V60I, K103R, D121DY, K122KE, D123DE, I135M, D177E, V179I, T200A, Q207E, R211K, V245Q, E248N, A272S, V317AD
 RS09000910RS09000910HQ441655NoneNone  V35T, E40D, K49R, V60I, D121H, K122E, D123E, I142IV, E169D, D177E, I178M, T200IR, Q207E, R211K, V245Q, D250E, V261I, L282C, T286AD
 RS09000935RS09000935HQ441677NoneNone  E6K, V35T, E40D, K49R, V60I, K122E, T165TI, I178M, T200I, Q207G, R211K, V245K, D250E, A272P, K277KR, L282C, L283I, I293VD
 RS11000296RS11000296JQ698382NoneNone  I5IM, D17DE, L26LW, V35T, E40D, V60I, K64KR, K122E, D123DN, T131TP, D177E, I178LV, V179I, I195L, T200M, Q207EG, R211K, Y232YF, H235HP, V245Q, D250E, A272S, K275KQ, L282C, L283I, I293V, P294TD
 RS11000327RS11000327JQ698404NoneNone  V35T, E40D, K43KN, K49KR, V60I, K122E, D123N, T131TP, T165I, D177E, I178M, T200KR, Q207E, R211K, D237DE, V245K, D250E, I257V, A272P, L282C, V292VI, I293VD
Karlsson (2012)SE_265SE_265JQ698851NoneNone  K20R, V35T, E40D, K49R, V60I, K122E, D177E, T200TI, Q207E, R211K, V245Q, D250ED
Machado (2012)CUPL0904CUPL0904HQ655337NoneNone  V35T, E40D, S48SP, K49R, V60I, K122E, I142V, E169D, D177E, Q207E, R211KD
 CUPL0909CUPL0909HQ655342NoneNone  V35T, E40D, V60I, F116I, K122E, D123S, E169D, D177E, T200A, Q207E, W229WR, K238RD
 CUPL0911CUPL0911HQ655344NoneNone  V35T, E40D, V60I, K122E, D123S, E169D, D177E, T200A, Q207E, T216PD
 CUPL0915CUPL0915HQ655348NoneNone  Q23K, V35T, E40D, E53D, V60I, K122E, D123S, E169D, D177E, T200A, Q207E, R211K, W212G, F214LD
 CUPL0920CUPL0920HQ655353NoneNone  I31IL, V35T, E40D, I50IM, V60I, D121H, K122E, E169D, Q174QP, D177E, Q197K, Q207ED
 CUPL0941CUPL0941HQ655374NoneNone  K11Q, V35T, T39A, E40D, K49R, V60I, K122E, D123S, E169D, D177E, Q207E, L234V, D237N, V241KD
 CUPL1038CUPL1038JN000010NoneNone  V35T, T39A, E40D, K122E, D123G, S162C, D177E, I178M, T200I, H221L, Q222R, E224K, F227S, V245T, D250E, A272S, T286A, V292I, E297K, K311R, P313Q, G335D, R356K, M357V, T377QD
 CUPL1067CUPL1067JN000039NoneNone  V35T, T39A, E40D, K49R, V60I, S68G, E169D, D177E, Q197E, Q207N, R211K, P236T, V245K, D250E, A272Q, T286A, K311R, P313Q, I326V, I329V, R356K, M357V, T377Q, K390RD
 CUPL1073CUPL1073JN000045NoneNone  V35T, E40D, K49R, V60I, K122E, D123S, E169D, D177E, T200A, Q207E, V245K, E248D, D250E, G262E, A272S, K277R, T286A, V292I, I293V, P313T, G316E, I329V, G335D, R356K, M357L, A376S, T377L, E378K, T386I, K390RD
 CUPL1090CUPL1090JN000062NoneNone  P4C, I5L, V35T, E40D, K49R, V60I, D123E, I142T, E169D, D177E, I178L, T200A, Q207E, R211M, V245Q, D250E, K277R, T286A, P294T, I329L, G335D, R356K, M357T, A376S, T377L, T386I, K390RD
 CUPL1096CUPL1096JN000068NoneNone  V35T, E40D, K49R, V60I, K64R, I135T, E169D, D177E, T200A, Q207DD
 CUPL1113CUPL1113JX194192NoneNone  V35T, E40D, K49R, V60I, K122Q, E169D, D177E, T200A, E203D, Q207E, V245T, S251I, A272S, K277R, T286A, I293V, E297K, P313Q, I326T, R356K, M357I, A376S, K390RD
 CUPL1126CUPL1126JX194205NoneNone  V35T, E40D, V60I, K122E, D123S, E169D, D177E, T200A, Q207ED
 CUPL1127CUPL1127JX194206NoneNone  V35T, E40D, V60I, K122E, D123S, E169D, D177E, T200A, Q207ED
Nazziwa (2012)31537013153701JX498981NoneNone  V35T, E40D, K49R, V60I, D177E, Q207E, R211KD
 10216021021602JX498983NoneNone K103NV35T, T39I, E40D, K49R, V60I, K122E, D123N, T165I, D177E, I178M, Q207G, R211K, V245M, E248ND
 31118013111801JX498984NoneNone  V21I, V35I, E40D, V60I, T200Q, I202V, Q207E, R211K, V245K, A272P, K277R, L282C, E297TD
 10241301024130JX498987NoneNone K103NV35T, T39I, E40D, K49R, V60I, K122E, D123N, T165I, D177E, I178M, Q207G, R211K, V245M, E248N, A272P, K277R, L282C, T286A, I293V, E297A, G335DD
 30392013039201JX498992NoneNone  P4T, I5V, V35T, E40D, K49R, V60I, K122E, D123S, I135T, K173A, D177E, V179I, Q207A, R211S, V245K, E248D, D250E, A272Q, L282C, A288T, I293V, G335DD
 30392023039202JX498993NoneNone  P4T, I5V, V35T, E40D, K49R, V60I, K122E, D123S, I135T, K173A, D177E, V179I, Q207A, R211S, V245K, E248D, D250E, A272Q, L282C, A288T, I293V, G335DD
 30963013096301JX498996NoneNone  P4N, V35T, E40D, K49R, V60I, K122E, D123N, D177E, I178M, T200I, Q207G, R211K, V245I, D250E, A272P, K277R, L282C, L283I, I293V, K311R, G335DD
 51341305134130JX499009NoneNone  P4H, K20R, V35T, E40D, K49R, V60I, I135V, T139I, Q145V, S162A, D177E, I178M, Q207G, R211K, V245T, D250E, A272P, K277R, L282C, L283I, I293V, G335DD
 63075016307501JX499011NoneNone  K11R, V35T, T39K, E40D, K49R, V60I, D121Y, K122E, I135T, T139V, T165V, Q174R, D177E, Q207E, R211K, F214L, D250G, A272P, T286A, V292I, K311RD
 70541017054101JX499015NoneNone  V35L, E40D, S48T, K49R, V60I, D121Y, K122E, S162C, D177E, T200I, Q207E, R211K, V245Q, D250E, A272P, K277R, L282C, L283I, I293V, K323R, D324E, G335DD
Reynolds (2012)F0703F0703-0JN652155NoneNone  I5IV, V35T, E40D, K49R, V60I, D121H, K122E, D123E, I135IATV, D177E, T200I, Q207G, R211K, I244IV, V245K, D250E, A272P, K277R, L282C, T286V, A288T, I293V, E297QD
Sigaloff (2012)KECGP010KECGP010JN628462NoneNone  V35T, E40D, K49R, V60I, K122E, I135T, K166N, T200I, Q207E, R211K, D237ND
 KEKSN410KEKSN410JN628475NoneNone  E28A, V35T, T39A, E40D, K122P, I135M, I142V, D177E, I178V, Q207E, R211KD
 KEKSN411KEKSN411JN628476NoneNone  V35T, E40D, K49R, V60I, D121H, K122E, F130Y, I142M, W153G, S156A, F160V, D177E, T200I, Q207G, R211KD
 KELKN251KELKN251JN628514NoneNone  E6N, K20R, I31V, V35T, T39I, E40D, K49R, V60I, K122E, I135T, T165I, K173I, Q174E, D177E, I178L, T200I, Q207E, R211K, F214LD
Ssemwanga (2012)RCC_TDR_356892RCC_TDR_356892JQ266020NoneNone  K11Q, V35T, T39A, E40D, V60I, D121Y, K122E, D177E, I178M, T200I, Q207E, R211KD
 RCC_TDR_358745RCC_TDR_358745JQ266021NoneNone  K20R, V35T, T39A, E40D, K49R, V60I, K122E, D123E, I142T, D177E, I178M, T200I, Q207E, R211KD
 RCC_TDR_359881RCC_TDR_359881JQ266022NoneNone  V35T, E40D, K49R, V60I, D121H, K122E, I135T, K173L, Q174K, D177E, I178V, T200Q, Q207D, R211K, F214LD
 RCC_TDR_480133RCC_TDR_480133JQ266023NoneNone  V8I, V35T, E40D, K49R, V60I, I142V, K166R, D177E, T200I, Q207G, R211KD
 RCC_TDR_481029RCC_TDR_481029JQ266024NoneNone  V35T, T39I, E40D, V60I, D121Y, K122E, D177E, I178L, Q207E, R211KD
 RCC_TDR_483689RCC_TDR_483689JQ266025NoneNone  K11S, V35T, T39A, E40D, V60I, K104Q, K122E, D123N, D177E, I178M, T200I, Q207E, R211KD
 RCC_TDR_480650RCC_TDR_480650JQ266026NoneNone  V35T, E40D, K49R, V60I, I142V, D177E, T200I, Q207N, R211KD
 RCC_TDR_190330RCC_TDR_190330JQ266027NoneNone  V8I, V35T, E40D, K49R, V60I, K166R, D177E, T200I, Q207E, R211K, F214LD
 RCC_TDR_359885RCC_TDR_359885JQ266030NoneNone  V35T, E40D, K49R, V60I, D121H, K122E, I135T, K173L, Q174K, D177E, I178V, T200Q, Q207D, R211K, F214LD
 RCC_TDR_353841RCC_TDR_353841JQ266037NoneNone  P4T, V35T, E40D, K49R, V60I, K122E, E169D, D177E, T200I, Q207E, R211KD
 RCC_TDR_358027RCC_TDR_358027JQ266038NoneNone  V35T, E40D, V60I, K122E, D123S, I135T, S162C, D177E, T200I, Q207E, R211KD
 RCC_TDR_481816RCC_TDR_481816JQ266041NoneNone  K20R, V21I, V35T, T39A, E40D, K49R, V60I, D121C, K122E, D177E, I178V, T200I, I202V, Q207G, R211KD
 RCC_TDR_480069RCC_TDR_480069JQ266046NoneNone  K11T, V35T, E40D, K49R, V60I, D121Y, K122E, S162C, D177E, I178L, V179I, T200I, Q207D, R211KD
 RCC_TDR_807857RCC_TDR_807857JQ266069NoneNone  V35T, E40D, K49R, V60I, D121H, K122E, I142V, D177E, T200I, Q207D, R211KD
 RCC-TDR-480431RCC-TDR-480431JQ266075NoneNone  E28A, V35T, T39A, E40D, V60I, D121Y, K122E, S162C, D177E, I178M, T200I, Q207D, R211KD
Ssemwanga (2012)1204HR1204HRJF800191NoneNone  V35T, E40D, K49R, V60I, D177E, T200I, Q207G, R211KD
 1444HR1444HRJF800193NoneNone  K11R, V35T, T39I, E40D, K49R, V60I, R172K, D177E, I178M, Q207E, R211KD
 0322HR0322HRJF800213NoneNone  V35T, E40D, K49R, E53K, V60I, D121H, K173R, Q174K, D177E, T200I, Q207E, R211KD
 6291HR6291HRJF800220NoneNone  V8I, V35T, E40D, K49R, V60I, D121H, K122E, S162N, R172K, D177E, I178M, T200I, Q207E, R211K, E224KD
 2946HR2946HRJF800223NoneNone  K20R, V21I, V35T, T39A, E40D, V60I, D121C, K122E, D123E, I135T, K173S, D177G, V179I, T200A, I202V, Q207A, R211S, F214LD
 5443HR5443HRJF800226NoneNone K103NV35T, E40D, K49R, V60I, E169D, G196E, T200A, Q207E, R211KD
 8651HR8651HRJF800231NoneNone  V35T, E40D, K49R, V60I, D121Y, K122E, D177E, V179I, I202V, Q207A, R211S, K223QD
Yang (2012)KEN-34TKEN-34T NoneNone  K30Q, K32G, A33C, L34T, V35L, E36N, I37F, T39R, E40D, K49R, V60I, K122E, I135T, I142T, K173S, Q174K, V179I, T200A, Q207A, R211N, V245ED
Frentz (2013)EHR-42835EHR-42835JX300262NoneNone  V35T, E40D, K49R, I50V, V60I, K122E, D177E, G196E, Q207A, V245QD
 EHR-45609EHR-45609JX300299NoneNone  K30Q, K32G, A33C, L34T, V35L, E36N, I37F, E40D, K49KR, V60VI, D121H, K122E, I135IT, K173L, Q174K, D177E, T200TA, Q207E, R211K, V245KQD
 EHR-63132EHR-63132JX300596NoneNone  V35T, E40D, K49R, V60I, K122E, D123G, K173R, D177E, I178M, T200I, Q207E, R211K, V245KD
 EHR-92753EHR-92753JX301085NoneNone  K30Q, K32G, A33C, L34T, V35L, E36N, I37F, T39A, E40D, K49R, V60I, K101R, K122E, D123N, I142T, E169D, D177E, Q207E, V245SD

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