<!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

Reverse Transcriptase Inhibitors

Subtype CRF02_AG
Gene RT
Mutation S68G
Rx RTI-naive
IncludeMixtures No
References 36
Patients 95
Isolates 95
 
Show mutation frequency as:
Exclude mutations:

Sequences matching input query are shown below. Original reference, patient identifier, isolate name, partial treatment histories and accession number are indicated. Complete treatment histories, when available, can be accessed by clicking the isolate name. Sequences may additionally be downloaded in the fasta format, or viewed as individual or composite alignments using the options above. If the user wishes to view individual alignments of isolates for which there are multiple clones, the user can choose to view either an alignment of consensus sequences derived from the clones or an alignment of each clone as well as a consensus sequence.

Author (yr) Patient Isolate Acc# NRTIs NNRTIsNRTIDRMs NNRTIDRMs OtherMutSubtype
Vergne (2000)LVMP975LVMP975AJ286951NoneNone  V35T, T39M, S68G, V90I, D123E, A158S, S162A, K173T, Q174K, D177E, T200A, Q207G, R211K, V245E, T286A, E291D, V292I, I293V, P294T, S322T, I326V, G335D, R356K, M357R, G359S, A371L, I375V, T403MCRF02_AG
 LV47HALDLV47HALDAJ286993NoneNone  V35K, T39A, S68G, I135V, S162A, T165I, E169Q, K173T, D177E, G196E, T200A, Q207E, V245Q, E248D, V276I, T286A, E291D, V292I, I293V, P294T, S322T, G335D, R356K, M357K, G359S, K366R, T369S, A371V, I375V, A376S, K390R, K395R, T403MCRF02_AG
 LVMP1311LVMP1311AJ287035NoneNone  V35T, E36D, V60I, S68G, V90I, D123E, S162A, K173T, Q174K, D177E, T200A, Q207E, R211K, V245T, E248Q, D250E, A272P, K281R, T286A, E291D, V292I, I293V, P294T, S322T, I326V, G335D, R356K, M357K, G359S, A371V, I375V, T377V, K388R, K390R, T403MCRF02_AG
Snoeck (2002)BE5BE5AF338985NoneNone  E36D, T39A, S68G, K102E, I135V, W153M, K154E, S162A, K173A, Q174K, D177E, I178M, T200A, Q207G, K220KHNQ, V245Q, E248D, Q258RCRF02_AG
Holguin (2003)SP_LP21SP_LP21AF455644NoneNone  V35K, E36D, V60I, S68G, I135V, S162A, K173T, Q174K, D177E, T200A, E203D, Q207E, R211KCRF02_AG
Toni (2003)TTDpci110TTDpci110AY207907NoneNone K103KNV35M, E36D, V60VI, S68G, V90I, K102KN, K122E, I135V, S162A, K173T, Q174E, D177E, G196E, T200A, E204K, Q207E, V245Q, L246P, E248ACRF02_AG
 TTDpci158TTDpci158AY207904NoneNone  V35T, T39K, S68G, V90I, D123N, I135V, S162A, K173T, Q174K, D177E, T200A, Q207E, R211K, P243S, V245QCRF02_AG
Kijak (2004)1901LE02CM.1901AY371146NoneNone  P14T, V35T, T39L, V60I, S68G, D121Y, K122E, I135T, S162A, K173A, Q174K, I178M, T200A, Q207E, R211K, V245N, T286A, E291D, V292I, I293V, P294V, S322A, G335D, R356K, M357R, G359S, V381I, K388R, K390R, A400T, T403V, V435I, G436E, V466I, V467I, D471E, Q480H, L491S, K512R, S519N, Q524K, K527E, E529D, A534S, A554N, K558RCRF02_AG
Konings (2004)KF_Pat11KF00U1157AY391757NoneNone  V35T, T39S, E40D, K49R, V60I, S68G, K104R, K122E, D123G, S162A, K173I, Q174K, D177E, I178M, T200A, Q207E, R211K, V245Q, K281R, T286A, E291D, V292I, I293V, P294T, S322A, G335D, R356K, M357R, G359S, A371V, K374R, I375V, T377M, K390R, A400T, T403M, E432D, V435E, A437V, T470P, D471E, Q480H, L491S, K512R, L517I, S519N, Q524R, K527E, E529D, A534SCRF02_AG
Holguin (2005)SP_22158SP_22158AF455636NoneNone  V35I, E36D, S68G, K122P, D123E, I135T, I142V, S162A, D177E, I178V, T200A, Q207ECRF02_AG
Ojesina (2006)AIO_DDJ025AIO_DDJ025DQ273892NoneNone  M16R, K20R, V35M, C38W, V60I, S68G, K102E, I135V, S162A, K173T, Q174A, D177E, I178M, T200A, Q207N, L210Q, R211K, F214L, V245Q, D250E, T286A, E291D, V292I, I293V, P294T, S322T, I326V, I329V, G335N, Q343H, N348D, R356K, M357R, G359S, T369V, A371V, A376S, K390R, E432D, V435A, A437VCRF02_AG
Vergne (2006)LV_03BF-ORAV18603BF-186AM181802NoneNone  K20KR, V35T, E36D, V60I, S68G, K101Q, K122E, D123DN, I135V, E138A, S162A, K173A, Q174K, D177E, G196E, T200A, Q207E, R211K, F214L, P243S, V245EQ, T286A, E291D, V292I, I293V, P294T, E297KR, S322T, I326V, G335D, R356K, M357R, G359S, A371V, I375V, A376AG, T377IKM, V381VI, K390R, K395R, E396D, T403MCRF02_AG
Vessiere (2006)AV_M3611NAV_M3611NDQ297308NoneNone  V35K, E36D, T39A, S68G, S162A, K173R, Q174K, T200A, Q207E, V245QCRF02_AG
 AV_M6188NAV_M6188NDQ297348NoneNone  V35T, T39E, E40D, V60I, S68G, I135V, S162A, P170T, K173T, Q174K, D177E, I178M, G196E, T200A, Q207E, V245QCRF02_AG
 AV_M9592NAV_M9592NDQ297370NoneNone  V35T, T39K, K43Q, K49R, S68G, I135V, S162A, E169D, K173T, Q174K, D177E, I178M, T200A, Q207E, P243H, V245QCRF02_AG
Derache (2007)11911191EF064467NoneNone  V35T, T39A, E40D, S68G, K122E, D123N, I135V, E138A, S162A, K173T, Q174K, D177E, I178M, T200A, Q207D, R211KCRF02_AG
 12291229EF064488NoneNone  V35E, E36D, V60I, S68G, D123E, I135T, S162A, K173T, Q174K, D177E, T200A, Q207ECRF02_AG
 13411341EF064544NoneNone  K32T, V35K, T39A, V60I, S68G, I135V, S162A, K173T, Q174K, D177E, I178M, T200A, Q207E, R211K, V241ICRF02_AG
Caron (2008)1001Gab1001RTEU556448NoneNone  V60I, S68G, S162A, K173T, Q174R, D177E, T200A, Q207E, R211KCRF02_AG
Delgado (2008)GH_022GH_022EU177899NoneNone E138KV35T, E36ED, T39A, V60I, S68G, I142IV, S162A, K173T, Q174K, D177E, I178M, T200A, Q207E, R211K, V245Q, E248N, T286A, E291D, V292I, I293V, P294T, S322T, I326VCRF02_AG
 GH_032GH_032EU177907NoneNone  T39A, S68G, I135T, S162A, T165TI, K173A, Q174E, D177E, T200A, Q207E, V245Q, E248D, A272P, K277R, K281R, T286A, E291D, V292I, I293V, P294AT, V317ACRF02_AG
 GH_229GH_229EU178058NoneNone  V35T, E36D, T39A, S68G, I135V, A158S, S162A, T165I, K173T, Q174K, D177E, I178M, T200A, Q207E, R211K, P243T, V245Q, V261I, K281R, T286A, E291DN, V292I, I293V, P294TCRF02_AG
Derache (2008)BKO-879BKO-879EU330647NoneNone  Q23P, V35T, E40D, V60I, S68G, D123E, I135V, E138A, S162A, K173T, Q174N, T200A, Q207E, R211K, F214LCRF02_AG
 BKO-954BKO-954EU330683NoneNone  V35T, T39M, K46Q, V60I, S68G, V90I, D123E, I135V, S162A, K173A, Q174K, D177E, T200A, Q207E, R211KCRF02_AG
 BKO-967BKO-967EU330690NoneNone  V35T, E36D, T39K, I50V, V60I, S68G, V90I, I135V, S162A, K173V, Q174K, D177E, T200A, E203Q, Q207D, R211KCRF02_AG
 BKO-1051BKO-1051EU330729NoneNone A98GV35T, E36D, T39K, S48A, I50V, V60I, S68G, V90I, I135V, S162A, K173T, Q174K, D177E, G196E, T200A, E203G, Q207D, R211K, Q222PCRF02_AG
 SGO-15SGO-15EU330760NoneNone  I31M, K32N, V35T, E36A, T39K, K43E, S68G, K122D, D123S, I135T, S162A, K173T, Q174K, D177E, I178M, T200A, Q207A, R211K, V245Q, E248KCRF02_AG
 SGO-42SGO-42EU330786NoneNone  S68G, D123E, A158S, S162A, S163T, K173T, Q174A, D177E, T200A, Q207E, R211KCRF02_AG
 SGO-44SGO-44EU330788NoneNone  T27P, V35T, E36D, T39A, E40D, S68G, D123E, I135V, I159V, S162A, T165I, K173T, Q174K, D177E, T200A, Q207ECRF02_AG
 SGO-70SGO-70EU330813NoneNone G190EI31V, V35K, I37F, V60I, S68G, D76N, I135V, S162A, K173T, Q174K, D177E, T200A, Q207A, F214LCRF02_AG
Holguin (2008)SP14-338695SP14-338695EU255387NoneNone  K22R, K32R, V35T, E36D, S68G, D121H, K122E, D123E, I135V, S162A, S163X, E169A, K173T, Q174E, D177E, T200A, Q207E, V245E, E248D, D250E, S251SN, Y271H, T286A, E291D, V292I, I293V, P294T, R307K, S322AT, I326VCRF02_AG
 SP1-173454SP1-173454EU342769NoneNone  M16V, E28K, K32E, V35T, S68G, D121H, K122E, I135V, S162A, K173T, Q174R, D177E, I178L, T200A, Q207E, R211K, V245Q, P247A, A272P, K277R, T286A, E291D, V292I, I293V, S322A, I326VCRF02_AG
Aghokeng (2009)CYN760CYN760GU191557NoneNone  K20R, V35T, E36D, T39K, K43E, V60I, S68G, I135V, S162A, K173A, Q174K, D177E, T200E, Q207E, R211K, V245T, P247S, T286A, E291D, V292I, I293V, P294T, S322T, I326V, G335D, R356K, M357R, G359S, A360T, K366R, T369A, K374R, I375V, T377R, V381I, K390R, T403MCRF02_AG
 CYN632CYN632GU191563NoneNone K103NP4S, I5V, V35T, E36D, V60I, K64R, S68G, V90I, I135V, S162A, K173T, Q174K, D177K, T200A, Q207E, R211K, V245Q, E248K, K281R, T286A, E291D, V292I, I293V, P294T, S322A, I326V, G335D, R356K, M357K, G359S, A371V, I375V, K390R, K395R, T403QCRF02_AG
 CYM166CYM166GU191569NoneNone  K32Q, V35K, E36D, S68G, K122E, D123NS, I135V, S162A, K173T, Q174K, D177E, T200A, Q207D, R211K, V245E, K281R, T286A, E291D, I293V, P294T, S322A, I326V, G335D, R356K, M357R, G359T, T369V, A371V, I375V, K385R, K390R, A400T, T403VCRF02_AG
 CDF0011CDF0011GU191622NoneNone  V35T, T39S, K49R, S68G, I135V, S162A, F171Y, K173T, Q174N, D177E, I178M, T200A, Q207K, R211K, P243H, V245Q, Y271F, T286A, E291D, V292I, I293V, P294T, S322T, I326V, G335D, I341V, F346Y, R356K, M357R, G359S, A371V, I375V, V381I, K390R, T403MCRF02_AG
 DG0405DG0405GU191645NoneNone  V35T, T39K, K49R, I50V, V60I, S68G, V106I, D123E, I135T, S162C, R172K, K173R, D177E, I178L, E204K, Q207E, F214L, V245T, D250E, A272P, K277R, T286A, I293V, E297K, D324E, I329V, Y339W, A376S, K390R, T403MCRF02_AG
Ayouba (2009)RES622RES622RTGQ351768NoneNone  T39I, S68G, K122E, D123N, S162A, K166R, K173T, Q174R, D177E, I178M, T200A, Q207E, V245T, D250ECRF02_AG
 0.6140.614-MRTGQ351879NoneNone  V35T, T39M, V60I, S68G, I135V, A158S, S162A, T165I, Q174E, D177E, I178M, T200A, E204K, Q207ECRF02_AG
 0.6510.651-BRTGQ351891NoneNone  V35K, V60I, S68G, I135T, S162A, K173L, Q174K, D177E, T200A, Q207E, R211KCRF02_AG
 28942894HALDRTGQ351910NoneNone  V35T, V60VI, S68G, I135V, S162A, T165I, K173T, Q174A, D177E, T200A, Q207ECRF02_AG
Tebit (2009)TR156TR156FJ577309NoneNone  A33P, V35T, T39A, E40D, S68G, K122E, D123N, S162A, F171Y, Q174D, D177E, T200A, Q207E, R211K, L228Q, V245E, K277R, T286A, E291D, V292I, I293V, E297K, L310ICRF02_AG
 TR174TR174FJ577320NoneNone  K11T, K20R, T27S, V35T, V60I, S68G, I135T, N136T, E138A, I142V, S162A, K173S, Q174K, D177E, V179I, T200A, Q207D, R211K, F214L, V245E, T286A, E291D, V292I, I293V, E312DCRF02_AG
Vercauteren (2009)pt8228257904274GQ400202NoneNone  T39A, E40D, V60VI, K64R, S68G, D123N, I135V, S162A, K173T, Q174K, D177E, I178M, T200A, Q207E, R211K, P243T, V245QCRF02_AG
 pt330JiHkMMZP2bGQ400694NoneNoneK219KR V35T, E40D, V60I, S68G, V90I, I135V, S162A, T165I, K173T, Q174K, D177E, T200A, Q207E, R211K, V245Q, I274IV, T286A, E291D, V292I, I293V, P294T, I309L, S322T, G335DCRF02_AG
 pt303kxvEhahDPoGQ400721NoneNone  V35T, T39M, S68G, V90I, E138A, S162A, K173T, T200A, Q207D, V245Q, K277R, L283I, T286A, E291D, V292I, P294T, L295M, S322T, G335DCRF02_AG
 pt274m2eQ1srKM1GQ400750NoneNone  V35T, T39M, S68G, V90I, E138A, S162A, K173T, T200A, Q207D, V245Q, K277R, L283I, T286A, E291D, V292I, P294T, L295M, S322TCRF02_AG
 pt116tYaF4lfcPBGQ400908NoneNone  V35T, E36D, K49R, V60I, S68G, D121Y, K122E, I135V, S162A, D177E, I195L, T200A, Q207E, R211K, L228Q, P243T, V245QCRF02_AG
Yaotse (2009)HT05806TG.HT058FM955695NoneNone  K32E, V35K, S68G, K122E, D123N, I135K, S162A, K173A, Q174K, D177E, I178IM, V179I, T200A, Q207E, V245Q, K281R, T286A, E291D, V292I, I293V, P294T, K311R, E312N, G335D, P345PT, M357K, G359S, K366R, T369V, A371V, I375V, A376V, E399ED, A400T, T403M, W410Y, E432DCRF02_AG
Yebra (2009)SP3-260414SP3-260414EU255307NoneNone  K32KR, V35T, E36D, T39K, K43E, S68G, R83RK, V90I, S162A, K173T, Q174KR, D177E, T200A, Q207K, R211X, V245Q, T286A, E291D, V292IT, I293V, P294A, E297K, E312D, S322T, I326VCRF02_AG
 SP43-341239SP43-341239EU342822NoneNone  K22R, K32R, V35T, E36D, S68G, D121H, K122E, D123E, I135V, S162A, E169A, K173T, Q174E, D177E, T200A, Q207E, V245E, E248D, D250E, S251SN, Y271H, T286A, E291D, V292I, I293V, P294T, R307K, S322ACRF02_AG
Descamps (2010)41odyssee41odysseeHQ717876NoneNone  V60I, S68G, D121H, K122E, S162A, K173T, D177E, T200A, Q207E, R211K, V245VE, E248D, K249XCRF02_AG
 95odyssee95odysseeHQ717930NoneNone  V35T, T39L, S68G, V90I, D121Y, K122Q, I132V, S162A, K173T, Q174K, D177E, T200A, Q207ECRF02_AG
 98odyssee98odysseeHQ717933NoneNone  V35T, E36D, T39L, V60I, S68G, I135R, S162A, K173T, Q174K, D177E, I178M, V179I, T200A, Q207ECRF02_AG
 127odyssee127odysseeHQ717961NoneNone  K49R, V60I, S68G, I135V, K154KN, A158AS, S162A, T165I, K173T, Q174K, D177E, I178M, T200A, Q207E, P243T, V245QCRF02_AG
 341odyssee341odysseeHQ718174NoneNone  V35I, T39A, S68G, I135L, S162A, K173A, Q174K, D177E, I178M, V189I, T200A, Q207ECRF02_AG
Diop-Ndiaye (2010)258HALD258HALDFN599699NoneNone  V35T, T39K, V60I, S68G, D121H, K122E, I135V, I159V, T165I, K173T, Q174K, D177E, T200A, I202IV, Q207E, R211K, V245Q, E248D, T286A, E291D, V292I, I293V, P294T, S322T, I326V, G335D, Y342F, R356K, M357R, G359S, A371V, I375V, K390R, T403M, E432DCRF02_AG
 89HPD89HPDFN599710NoneNone  V35K, T39A, S68G, I135V, S162A, T165I, E169Q, K173T, D177E, G196E, H198P, T200A, Q207E, V245Q, E248D, V276I, T286A, E291D, V292I, I293V, P294T, S322T, G335D, R356K, M357K, G359S, K366R, T369S, A371V, I375V, A376S, K390R, K395R, T403M, Y427FCRF02_AG
 L140L140FN599728NoneNone  S68G, V90I, I135V, E138G, S162A, R172K, K173T, Q174R, D177E, I178M, T200A, E204D, Q207EG, R211K, V245E, K249Q, L283I, T286A, E291D, V292I, I293V, P294T, L310I, V317A, S322T, I326V, G335D, R356K, M357R, R358K, G359S, A371V, I375A, T386I, K390R, E396D, T403MCRF02_AG
 979hald979haldFN599775NoneNone  V35T, V60I, S68G, K102KR, D123E, I135V, S162A, K173T, Q174K, D177E, T200A, Q207E, R211RK, V245E, E248D, A272P, T286A, E291D, V292I, I293V, P294T, K311R, S322T, I326V, G335D, R356K, M357K, G359S, K366KR, A371V, I375V, K390R, K395R, A400T, T403MCRF02_AG
 1732hald1732haldFN599792NoneNone  M16MT, V35T, T39M, S68G, V90I, S162A, K173T, Q174N, D177E, T200A, Q207E, R211K, V245E, T286A, I293V, P294T, S322T, I326V, Q334K, G335D, R356K, M357R, G359S, A371V, I375V, A376V, V381I, K390RCRF02_AG
 1759-hald1759-haldFN599794NoneNone E138KV35T, S68G, R72K, D76N, D121N, K122I, D123N, I135V, S162A, K173T, Q174K, D177E, T200A, R206K, Q207E, R211K, E233K, P243S, V245Q, E248D, A272P, T286A, E291D, V292I, I293V, P294T, S322A, D324E, G335D, R356K, M357K, G359S, A371V, I375A, V381I, K390R, K395R, T403R, K424R, W426WLCRF02_AG
Yebra (2010)13840803SP00138408FJ481696NoneNone  M16V, K20R, V35T, S68G, D123E, S162A, K173T, Q174K, D177E, I178M, V179I, T200A, Q207E, R211KCRF02_AG
Aghokeng (2011)HJ1786HJ1786JN639509NoneNone  P14Q, E29EK, V35KT, E36D, V60I, S68G, R78RK, R83RK, E89EGKR, D123E, I135V, S162A, E169EK, R172RK, K173T, Q174K, D177E, T200TA, R211K, V245Q, T286A, E291D, I293V, P294T, E312D, I326V, G335DCRF02_AG
 SK5015-PISK5015-PIHQ864442NoneNone  V35T, T39L, S68G, K122KI, D123E, I135V, I159V, S162A, Q174E, D177E, T200A, Q207E, P243PT, V245Q, E248D, S251SHNR, T286A, E291D, V292I, I293V, P294TCRF02_AG
 SK3006-PISK3006-PIHQ864449NoneNone V179VDV35T, E36ED, T39L, E40D, V60I, S68G, D123E, I135V, E138A, S162A, T165TI, K173T, Q174K, D177DE, I178IV, T200A, Q207EG, R211RK, F214FL, P243H, V245Q, K281R, T286A, E291D, V292I, I293V, P294TCRF02_AG
Charpentier (2011)patng_17patng_17HQ021247NoneNone  V35T, E36D, T39S, E40D, S68G, V90I, D121H, K122E, I135R, R143RK, S162A, K173AITV, Q174K, D177E, G196E, T200A, Q207E, F214FL, V245QCRF02_AG
 patng_31patng_31HQ021260NoneNone  V35I, T39A, E40D, S68G, V90I, D123E, I135RT, S162A, K173T, Q174K, D177E, I178M, G196E, T200A, Q207G, R211K, V245QCRF02_AG
El Annaz (2011)54155415HQ393351NoneNone  V21D, V35R, E36D, T39A, K49R, V60I, S68G, K122E, I135T, I142V, S162A, E169G, K173T, Q174K, D177E, T200A, Q207E, R211K, F214L, L228G, E233D, P236R, D237H, K238I, Q242P, V245LCRF02_AG
 76317631HQ393371NoneNone  V35T, E36A, T39K, K43E, S68G, K122E, I135T, S162A, K173M, Q174K, D177E, T200A, Q207G, V245QCRF02_AG
Hamers (2011)CP076303489CP076303489HQ993978NoneNone  P4S, V35T, T39A, E40D, S68G, D123E, I135V, S162A, K173I, Q174K, D177E, T200A, Q207E, R211K, F214L, V245Q, K281R, T286A, E291ED, V292I, I293V, P294T, E297D, S322T, I326VCRF02_AG
 CP076303534CP076303534HQ994015NoneNone  K11KR, V35K, E36D, S68G, T69TA, D123E, I135LV, S162A, K173T, Q174R, D177E, T200A, Q207E, R211K, V245Q, P247A, S251N, A272P, K277R, K281R, T286A, E291D, V292I, I293V, P294T, S322T, I326VCRF02_AG
 CP076303541CP076303541HQ994020NoneNone  V35M, T39A, V60VI, S68G, D123E, S162A, K173T, Q174K, D177E, T200A, Q207E, P243H, V245E, T286A, E291D, V292I, I293V, P294T, E297V, S322T, I329LCRF02_AG
 CP076303546CP076303546HQ994025NoneNone Y318FV35T, T39K, V60I, S68G, D123E, I135V, K173R, Q174E, D177E, I178M, T200TAEK, E204KQR, Q207E, R211K, P243T, V245Q, K281R, T286A, E291D, V292I, I293V, P294T, S322A, I326VCRF02_AG
 CP076303602CP076303602HQ994065NoneNone  K20R, V35K, E36D, S68G, D123E, S162G, K173T, Q174K, D177E, T200A, Q207E, F214L, V245Q, A272P, K281R, T286A, E291D, V292I, I293V, P294T, E312D, K323R, I326V, G335DCRF02_AG
 CP076303605CP076303605HQ994067NoneNone  V35I, S68G, K122P, D123E, I135T, S162A, K173AT, Q174K, D177E, T200A, Q207E, R211RK, P243PS, V245Q, T286A, E291D, V292I, I293V, P294T, S322TCRF02_AG
 CP076303611CP076303611HQ994072NoneNone  P4S, E6ED, V35T, E36D, T39KR, V60I, S68G, K122E, I135V, S162A, K173T, Q174R, D177E, T200A, Q207DE, R211K, F214L, V245E, D250E, A272P, K275Q, K277R, T286TA, E291D, V292I, I293VCRF02_AG
 CP076303633CP076303633HQ994088NoneNone Y318FV35T, S68G, V90I, K122KE, D123E, I135V, S162A, K173T, Q174E, D177E, T200A, Q207EK, R211K, V245MT, A272P, V276I, L283I, T286A, E291D, V292I, I293V, P294T, E312Q, V314A, Y319X, S322ACRF02_AG
 CP076305186CP076305186HQ994131NoneNone  V35T, E36D, T39M, V60I, S68G, I135V, S162A, K173I, Q174K, D177E, T200A, Q207D, R211K, P243H, V245E, E248D, I257IV, K275R, T286A, E291D, V292I, I293V, P294TCRF02_AG
 CP076300928CP076300928HQ994544NoneNone  V35T, T39A, S68G, K122E, D123N, S162A, K173T, Q174K, D177E, I178IM, T200A, Q207E, R211K, V245Q, T286A, E291D, V292I, I293V, P294ACRF02_AG
Rolland (2011)2696consensus_2696JF320295NoneNone  V35T, K43R, V60I, S68G, S162A, K173A, Q174K, D177E, I178M, E203Q, Q207E, R211K, F214L, V245K, K277R, T286A, V292I, I293V, P294T, I326V, G335D, R356K, M357K, R358K, G359S, A371V, K374R, I375V, A376S, K390R, T403R, E432D, S468P, D471E, Q480H, L491S, K512R, S519N, Q524K, K527E, E529D, A534S, A554SCRF02_AG
Ajoge (2012)H22HR22HM854138NoneNone  L34S, V35T, T39K, K43Q, V60I, S68G, P119S, I135V, I159V, D177E, T200A, Q207A, R211K, P243H, V245E, P247L, A272S, K281R, T286A, V292I, I293V, P294T, L295M, I309T, S322T, G335D, R356K, M357K, R358K, G359S, A371V, I375V, A376S, K390R, T403M, E432D, V435ACRF02_AG
 H34HR34HM854143NoneNone  V35T, T39M, V60I, S68G, K122M, D123G, I135T, S162A, K173A, Q174K, D177E, T200A, Q207D, R211K, F214L, V245Q, E248N, K249Q, A272P, V276I, T286A, V292I, I293V, P294T, S322T, G335D, R356K, M357R, R358K, G359S, T369A, A371V, I375V, A376I, T386A, K390R, A400T, T403M, E432DCRF02_AG
Caron (2012)Gab031177Gab031177HQ541906NoneNone  K20R, V35T, E36N, V60I, S68G, K102Q, K122P, I135V, S162A, K173T, Q174R, D177E, I178M, T200A, Q207E, R211K, P243T, V245E, E248DCRF02_AG
 Gab041032Gab041032HQ541914NoneNone  V35T, T39R, K43E, K49R, S68G, K104R, D123N, E169D, K173A, Q174K, D177E, I178V, V179I, T200A, Q207E, R211S, V245QCRF02_AG
 Gab091257Gab091257HQ541944NoneNone  V35K, E36D, T39A, S68G, K122E, S162A, K173T, Q174K, D177E, T200A, Q207E, V245ECRF02_AG
Chamberland (2012)D342TD342THQ267637NoneNone  K13M, S68G, E138A, S162A, K173I, Q174K, D177E, I178M, T200A, Q207N, R211K, V245Q, D250E, T286A, E291D, V292T, I293V, P294T, K311R, S322T, E328D, G335D, F346G, R356K, M357R, G359S, A371V, I375A, I380V, K390R, E399D, T403M, E413DCRF02_AG
 D354TD354THQ267646NoneNone  P14PA, V35T, S68G, D123E, I135T, S162A, K173L, Q174K, D177E, T200A, Q207A, F214L, V245Q, A272P, E291D, V292I, I293V, R356RK, M357GR, G359S, T369TA, A371V, K374R, I375V, A376T, T377I, K390R, K395R, A400T, T403M, Y405YHCRF02_AG
De Gascun (2012)IRL32818IRL32818JN622272NoneNone  S68G, K122E, I135V, S162A, K173T, Q174R, D177E, I178M, G196E, Q197K, T200A, Q207E, R211KCRF02_AG
Delwart (2012)479-6750-2479-6750-2JN215060NoneNone  V35T, T39N, V60I, S68G, D123E, I135V, T139L, S162A, K173A, Q174R, D177E, G196E, E203G, Q207E, R211K, F214L, V245Q, A272P, K277R, T286A, E291D, I293VCRF02_AG
Youngpairoj (2012)cm1647cm1647DQ166405NoneNone  P14S, V35T, T39L, I50V, S68G, I135V, S162A, K173T, Q174K, D177E, I178M, V179I, T200A, Q207E, V245Q, E248D, K281R, T286A, E291D, V292I, I293V, P294T, E312D, S322A, I326V, G335D, R356K, M357R, G359S, T369V, A371V, I375V, A376T, K390R, T403M, E432D, V435E, E438KCRF02_AG
Frentz (2013)EHR-00105EHR-00105JX299533NoneNone  P14AS, V35T, T39A, E40D, S68G, V90I, I135V, S162A, K173AT, Q174K, D177DE, I178IM, V179VI, T200A, Q207E, V245TCRF02_AG
 EHR-26697EHR-26697JX300002NoneNone  V35T, E36A, T39TA, K43Q, K49R, V60I, S68G, K102Q, I135V, A158AS, S162A, T165I, Q174E, D177E, T200TA, E204K, Q207E, P243T, V245QCRF02_AG
 EHR-63802EHR-63802JX300608NoneNone  V35T, E36D, T39L, V60VI, S68G, V90I, T107TS, K122P, I135V, E138A, S162A, Q174N, D177E, I178V, Q197L, Q207E, R211K, V245QCRF02_AG
 EHR-73035EHR-73035JX300781NoneNone  T39IL, S68G, W88WC, I135V, S162A, F171S, R172E, K173Q, Q174K, D177E, T200A, Q207A, R211EK, V245QCRF02_AG

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