| Author (yr) |
Patient |
Isolate |
Acc# |
NRTIs |
NNRTIs | NRTIDRMs |
NNRTIDRMs |
OtherMut | Subtype |
| Cornelissen (2000) | MC94GH10 | MC94GH10 | AF212280 | None | None | | | V35T, T39A, E40D, K46X, K49R, I135V, S162A, E169K, K173A, Q174E, D177E, T200A, I202V, Q207E, V245Q, A272P, T286A | CRF02_AG |
| Vergne (2000) | LVMP1027 | LVMP1027 | AJ286954 | None | None | | | V35T, E40D, V60I, D121H, K122E, I135V, S162A, K166T, K173A, Q174K, D177E, T200A, Q207E, R211K, V245Q, K277R, T286A, E291D, V292I, I293V, P294T, S322T, I326V, G335D, R356K, M357K, G359S, A371V, I375V, K390R, A400T, T403M | CRF02_AG |
| | LV7 | LV7 | AJ286140 | None | None | | | V35T, T39A, E40D, D123E, I135V, S162A, E169D, K173T, Q174N, D177E, T200A, Q207E, R211K, V245Q, T286A, E291D, V292I, I293V, P294T, S322T, G335D, R356K, M357K, G359S, A371V, I375V, K390R, K395R, T403M, E432D | CRF02_AG |
| | LV8HPD | LV8HPD | AJ286984 | None | None | | | V35T, E40D, I135V, S162A, K173A, Q174K, D177E, T200A, Q207E, V245L, K281R, T286A, E291D, V292I, I293V, P294I, L295M, E297K, S322T, I326V, G335D, R356K, M357K, G359S, T369A, A371V, I375A, A376T, K390R, A400T, T403M | CRF02_AG |
| | LVMBTB29 | LVMBTB29 | AJ287022 | None | None | | | V35T, T39A, E40D, K49R, K122E, D123G, A158S, K173T, Q174E, D177E, I178M, T200A, Q207E, V245K, D250E, S251C, A272P, T286A, V292I, P294A, E297K, E312D, I326V, I329V, G335D, R356K, M357K, G359S, A371V, T377M, V381I, K390R, T403V | CRF02_AG |
| | LVMP1262 | LVMP1262 | AJ287034 | None | None | | | V35T, E40D, V60I, K122P, I135V, S162A, K173T, Q174K, D177E, I178M, T200A, Q207E, R211K, V245Q, E248D, T286A, V292I, I293V, P294T, S322T, I326V, G335D, R356K, M357K, G359S, A371V, I375V, A376S, K390R, T403M | CRF02_AG |
| Thomson (2001) | MT-X488 | MT-X488 | AY017456 | None | None | | | V35T, E40D, K49R, I135V, S162A, K173T, Q174R, D177E, E194K, T200A, R206E, Q207E, K220E, L228F | CRF02_AG |
| Yahi (2001) | NY_M18 | M18 | AY010438 | None | None | | | V35T, E40D, K49R, I135V, S162A, F171Y, K173T, Q174K, D177E, T200A, I202V, Q207E, R211K | CRF02_AG |
| Vergne (2002) | LVLBV30_10 | LVLBV30_10 | AJ313402 | None | None | | | V35T, E40D, K122E, D123N, I135V, S162A, K173T, Q174K, D177E, T200A, Q207E, R211K, V245Q, E248N, T286A, E291D, V292I, I293V, P294T, S322T, I326V, G335D, R356K, M357K, R358K, G359S, A371V, I375V, T377L, K390R, E396D, T403M, E432D, V435M, A437V | CRF02_AG |
| Carrion (2003) | ECU41 | ECU41 | AY151001 | None | None | | | V35T, E40D, I135V, S162A, K173A, Q174K, D177E, V189I, G196R, T200A, I202V, Q207E, R211K, V245Q, T286A, E291D, V292M, I293V, P294I, E312Q, S322T, I326V, G335D, R356K, M357K, G359S, T369A, A371V, I375V, T377I, K390R, K395R, E432D, A437V, K465R, D471E, Q480H, H483Y, L491S, K512R, S519N, K527G, E529D, A534S, A554N, K558R | CRF02_AG |
| | ECU42 | ECU42 | AY151002 | None | None | | | V35T, E40D, I135V, S162A, K173A, Q174K, D177E, V189I, Q197E, T200A, I202V, Q207E, R211K, V245Q, T286A, E291D, V292M, I293V, P294I, E312Q, S322T, I326V, G335D, R356K, M357K, G359S, I375V, K390R, K395R, E432D, A437V, L452I, K465R, D471E, Q480H, H483Y, L491S, K512R, S519N, Q524K, K527E, E529D, A534S, A554N, K558R | CRF02_AG |
| Toni (2003) | TTDdp1 | TTDdp1 | AY207844 | None | None | | K103KT | V8G, P9A, K20R, K30E, K32R, V35T, E36D, T39A, E40D, R72RS, Q91QR, K101KR, I135V, S162A, K173T, Q174K, D177E, T200A, Q207E, R211K, V245Q | CRF02_AG |
| | TTDdp15 | TTDdp15 | AY207857 | None | None | | | K30KE, V35T, E36D, T39A, E40D, D121Y, K122E, S162A, K173S, Q174K, D177E, V179I, G196E, Q207A, F214L, V245E | CRF02_AG |
| | TTDdp27 | TTDdp27 | AY207866 | None | None | | | K30KE, V35T, E40D, K49R, K122Q, S162A, K173T, Q174K, D177E, I178M, T200A, Q207E | CRF02_AG |
| | TTDdp34 | TTDdp34 | AY207871 | None | None | | | V35T, T39I, E40D, K49R, V60I, D121H, K122E, I135V, K166KR, K173KN, D177E, I195L, T200TA, Q207E, V245KQ, L246I, S251G | CRF02_AG |
| | TTDdp64 | TTDdp64 | AY207886 | None | None | | | K32KQ, V35T, T39A, E40D, K102Q, D121Y, K122E, K154KE, S162A, K173T, Q174R, D177E, I195L, Q197E, T200A, Q207E, R211K, F214L, L228LF, V245Q, K249Q | CRF02_AG |
| | TTDpci120 | TTDpci120 | AY207915 | None | None | | | V35T, E40D, K49R, V60I, I135V, S162A, K173T, Q174K, D177E, T200A, Q207E, R211K, V245Q, E248D | CRF02_AG |
| | TTDpci142 | TTDpci142 | AY207890 | None | None | | | K30KE, V35T, E36D, E40D, I135V, S162A, K173A, N175NY, Q207A, R211K, V245Q, E248N | CRF02_AG |
| | TTDdp4 | TTDdp4 | AY207847 | None | None | | | K32KR, V35T, E36D, E40D, K122E, I135V, S162A, K173T, Q174QR, D177E, V179I, Q207A, L228Q, V245M, E248N | CRF02_AG |
| Eshleman (2004) | ABB29 | ABB29 | AY444249 | None | None | | | V35T, E40D, K43KR, V60I, R83RK, K122E, D123S, S162A, K173I, Q174K, D177E, E203EK, Q207E, R211RK, V245Q, T286A, E291D, V292I, I293V, P294T, S322T | CRF02_AG |
| Gulick (2004) | RG394 | RG394w0 | | None | None | | | T39A, E40D, V111VL, K122E, D123A, I135T, S162H, K173S, V179I, T200A, Q207E, R211K, F214FL, V245Q | CRF02_AG |
| Kijak (2004) | 0158ND | 01CM.0158 | AY371132 | None | None | | | V35T, T39A, E40D, D121H, K122E, D123E, I135IT, S162A, K173AV, Q174K, D177E, T200A, Q207E, V245Q, D250E, S251N, A272P, T286A, E291D, V292I, I293V, P294T, S322A, G335D, R356K, M357R, G359S, T369V, A371I, A376T, T386I, K390R, A400T, T403L, E432D, V435I, D471E, Q480H, L491S, K512R, S519N, Q524K, K527E, E529D, A534S, A554T, K558R, V559I | CRF02_AG |
| Konings (2004) | KF_Pat11 | KF00U1157 | AY391757 | None | None | | | V35T, T39S, E40D, K49R, V60I, S68G, K104R, K122E, D123G, S162A, K173I, Q174K, D177E, I178M, T200A, Q207E, R211K, V245Q, K281R, T286A, E291D, V292I, I293V, P294T, S322A, G335D, R356K, M357R, G359S, A371V, K374R, I375V, T377M, K390R, A400T, T403M, E432D, V435E, A437V, T470P, D471E, Q480H, L491S, K512R, L517I, S519N, Q524R, K527E, E529D, A534S | CRF02_AG |
| Snoeck (2004) | BE35 | BE35 | AY901293 | None | None | | | I31IV, V35T, T39A, E40D, K126KR, S162A, K173IT, Q174K, D177E, T200A, Q207N, R211K, V245Q, V276VI, T286A, E291D, V292I, I293V, P294T, K311R, S322T | CRF02_AG |
| | BE79 | BE79 | AY901509 | None | None | | | V35T, T39A, E40D, S162A, K173T, Q174K, D177E, T200A, Q207X, R211K, V245Q, T286A, E291D, V292I, I293V, P294T, K311R, S322T | CRF02_AG |
| Carr (2005) | 4020HAN | 4020HAN | AY847386 | None | None | | | V35T, E36D, T39A, E40D, G45R, K49R, R72K, K104R, I135V, S162A, K173V, Q174K, D177E, T200A, Q207K, R211T | CRF02_AG |
| | 4171STN | 4171STN | AY847406 | None | None | | | K20R, K32R, V35T, E36D, E40D, K43R, V60I, K104R, K122E, D123G, S162A, K173I, Q174K, D177E, T200A, E203D, Q207E, R211K | CRF02_AG |
| | 0144ND | 0144ND | AY847403 | None | None | | | V35T, T39A, E40D, D121H, K122E, D123E, S162A, K173A, Q174E, D177K, T200A, Q207E, R211K | CRF02_AG |
| | 4080HAN | 4080HAN | AY847390 | None | None | | | V35T, E36D, T39A, E40D, K104R, I135V, S162A, K173V, Q174D, D177E, T200A, Q207K, R211T | CRF02_AG |
| | 0158ND | 0158ND | AY847420 | None | None | | | V35T, T39A, E40D, D121H, K122E, D123E, I135IT, S162A, K173AV, Q174K, D177E, T200A, Q207E | CRF02_AG |
| | 2378LE | 2378LE | AY847431 | None | None | | | E6K, V35T, E40D, K43R, K104R, K122E, D123N, I135V, S162A, K173I, Q174K, D177E, T200A, Q207A, R211K | CRF02_AG |
| | 4286STN | 4286STN | AY847375 | None | None | | | E6N, V35T, E40D, K104R, K122E, D123S, I135V, S162A, K173T, Q174K, D177E, T200A, Q207E, R211Q | CRF02_AG |
| | 2387LE | 2387LE | AY847432 | None | None | | | E6K, V35T, E36D, E40D, K102Q, K104R, K122E, S162A, K173R, Q174K, D177E, I178L, V179G, T200A, Q207E, E233K | CRF02_AG |
| | 2188SA | 2188SA | AY847425 | None | None | | | V35T, E40D, K104R, K122E, D123S, S162A, K173A, Q174K, D177E, T200A, Q207E, R211K | CRF02_AG |
| | 02UZ815 | 02UZ815 | AY845716 | None | None | | | P14E, V35T, E40D, D121Y, K122E, I135M, S162A, K173I, Q174K, T200A, Q207A, R211K | CRF02_AG |
| Non-B Workgroup (2005) | PL36294 | 60049 | AY901679 | None | None | | | V35T, E36D, E40D, K49R, I135V, S162A, K173I, Q174K, D177E, T200A, Q207E, R211K, D237N, V245Q, K277R, T286A, E291D, V292I, I293V, P294A | CRF02_AG |
| Tovanabutra (2005) | 99US_MSC1134 | 99US_1134 | AY444809 | None | None | | | V35T, E36D, T39A, E40D, K49R, V60I, I135V, K173I, Q174K, D177E, T200A, E204K, Q207E, R211K, V245E, S251C, K277R, K281R, T286A, E291D, V292I, I293V, P294T, P321S, S322T, I326V, G335D, R356K, M357K, G359S, A371V, I375V, K390R, K395R, T403M, K431R, E432D, T470N, D471E, Q480H, L491S, K512R, S519N, Q520L, Q524K, K527E, E529D, A534S, A554S | CRF02_AG |
| Babic (2006) | DB_SI378-02 | SI378-02 | AJ971094 | None | None | | | V35T, E40D, V60I, K102Q, K122E, D123E, I135V, S162A, K173T, D177E, T200A, E204K, Q207E, V245Q, K281R, T286A, E291D, V292I, I293V, P294T, S322A | CRF02_AG |
| | DB_SI376-02 | SI376-02 | AJ971095 | None | None | | | V35T, E40D, V60I, K102Q, K122E, D123E, I135V, S162A, K173T, D177E, T200A, Q207E, V245Q, K281KR, T286A, E291D, V292VI, I293V, P294T, S322P, K331N | CRF02_AG |
| Carr (2006) | 2931HA | 2931HA | DQ826727 | None | None | | | V21I, V35T, T39N, E40D, V60I, A98S, K104R, D123K, I135V, K173A, D177E, T200V, Q207K, V245Q, Y271F, A272P, K275R, K277R, Q278E, T286A, E291D, V292I, I293V, P294T, S322A, I326V, G335D, F346H, R356K, M357R, R358G, G359S, V381I, T386L, K390R, A400T, E404D, E432D, V435I, R461K, D471E, Q480Y, L491S, L517I, S519N, K527R, A534S, A554K | CRF02_AG |
| Jayaraman (2006) | 2-00-0552 | 2-00-0552 | | None | None | | | V35T, E40D, K49R, D121DY, I135T, S162A, K173D, Q174K, D177E, T200A, Q207A, R211K, V245Q, D250E | CRF02_AG |
| Koizumi (2006) | YK_04CM006 | YK_04CM006 | DQ461879 | None | None | | | K11E, T27S, V35T, E36D, E40D, K49R, K101R, D121H, K122E, D123S, S162A, K173A, Q174K, D177E, T200A, E203K, Q207E, R211K | CRF02_AG |
| | YK_04CM012 | YK_04CM012 | DQ461884 | None | None | | | V35T, E40D, S162A, Q174E, D177G, T200E, E203Q, Q207E, R211K | CRF02_AG |
| | YK_04CM025 | YK_04CM025 | DQ461889 | None | None | | | V35T, E40D, G45R, K122P, I135V, E138A, S162M, K173I, Q174K, T200E, E203Q, Q207D, L209I | CRF02_AG |
| | YK_04CM061 | YK_04CM061 | DQ461905 | None | None | | | V35T, E40D, I63V, K122P, I135V, E138A, S162M, K173I, Q174R, T200E, E203Q, Q207D | CRF02_AG |
| | YK_04CM062 | YK_04CM062 | DQ461906 | None | None | | | V35T, E40D, K122E, T139A, S162A, K173A, Q174K, D177E, T200E, E203Q, Q207D | CRF02_AG |
| | YK_04CM073 | YK_04CM073 | DQ461914 | None | None | | | V35T, E36D, T39A, E40D, S48T, K49R, V90I, K122E, S162A, K173T, Q174N, D177E, T200A, Q207E, R211K | CRF02_AG |
| Njai (2006) | MP1371 | 99CM.1371 | AM279390 | None | None | | | V35T, E36D, E40D, V60I, K103Q, K104R, D121H, K122E, I135R, I142T, S162A, K173T, Q174K, D177E, T200A, Q207E, R211K, F214L, V245Q, K275R, K281R, T286A, E291D, V292I, I293V, P294T, S322A, I326V, G335D, R356K, M357R, G359S, T369V, A371V, I375V, A376V, K390R, A400T, E432D, V435I, D471E, K476R, Q480H, H483Y, L491S, K512R, S519N, Q524K, K527E, E529D, A534S, A554N, K558R, V559I | CRF02_AG |
| | MP1372 | 99CM.1372 | AM279395 | None | None | | | V35T, T39A, E40D, A98S, D123E, I135V, S162A, K173V, Q174K, D177E, I178M, T200A, Q207E, R211S, V245Q, D250E, A272P, K275Q, K277R, K281R, T286A, E291D, V292I, I293V, E297A, S322T, G335D, R356K, M357R, G359S, A371V, I375V, K390R, K395R, T403M, E432D, V435A, D471E, Q480H, L491S, K512R, E514D, L517I, S519N, Q524K, K527Q, A534S, A554S | CRF02_AG |
| Razafindratsimandresy (2006) | RR_MAD-GF301 | MAD-GF301 | DQ345057 | None | None | | | V35T, T39A, E40D, D86E, S162A, K173N, Q174K, D177E, I178M, T200A, Q207G, R211K | CRF02_AG |
| | RR_MAD-GI061 | MAD-GI061 | DQ345043 | None | None | | | V35T, E40D, K49R, V60I, K102KQ, S162A, K173T, Q174K, D177E, I178L, T200A, Q207E, R211K, F214FL, V245Q, E248N | CRF02_AG |
| | RR_MAD-GP009 | MAD-GP009 | DQ345035 | None | None | | | V35T, E40D, K122Q, S162A, K173T, Q174K, D177E, T200A, Q207E | CRF02_AG |
| | RR_MAD-GP052 | MAD-GP052 | DQ345038 | None | None | | | V35T, E40D, D121Y, K122E, S162A, K173N, D177E, T200AV, Q207E, R211K, V245E | CRF02_AG |
| | RR_MAD-GP099 | MAD-GP099 | DQ345044 | None | None | | | V35T, E36D, T39A, E40D, K122KR, D123DE, S162A, K173T, Q174K, D177E, T200A, Q207E, R211K, V245Q | CRF02_AG |
| Vergne (2006) | LV_03BF-ORAV288 | 03BF-288 | AM181800 | None | None | | V108I | V35IT, T39TA, E40D, K49R, D121Y, K122E, A158S, I159V, S162A, E169K, K173E, Q174K, D177E, V189I, T200A, Q207E, R211K, P243T, V245Q, T286A, E291D, V292I, E297A, G335D, R356K, M357R, G359S, K390R, A400T | CRF02_AG |
| Vessiere (2006) | AV_M2386N | AV_M2386N | DQ297284 | None | None | | V108I | V35T, T39A, E40D, V60I, K122P, D123E, I135L, S162A, K173T, Q174K, D177E, T200A, Q207E, R211K, V245Q, E248D | CRF02_AG |
| | AV_M3048N | AV_M3048N | DQ297294 | None | None | | | V35T, E36D, E40D, K49R, I135V, S162A, K173T, Q174K, D177E, T200A, Q207E, V245Q | CRF02_AG |
| | AV_M3227N | AV_M3227N | DQ297297 | None | None | | | V35T, T39A, E40D, I135V, S162A, Q174R, N175Y, D177E, T200A, Q207E, T216A, V245Q, D250E | CRF02_AG |
| | AV_M6188N | AV_M6188N | DQ297348 | None | None | | | V35T, T39E, E40D, V60I, S68G, I135V, S162A, P170T, K173T, Q174K, D177E, I178M, G196E, T200A, Q207E, V245Q | CRF02_AG |
| | AV_M6608N | AV_M6608N | DQ297350 | None | None | | | V35T, E36D, T39A, E40D, K122E, D123S, S162A, K173A, Q174K, D177E, T200A, Q207E, R211K, P243T | CRF02_AG |
| | AV_M6719N | AV_M6719N | DQ297351 | None | None | | | V35T, E40D, K102Q, K122KE, D123E, S162A, K173T, Q174K, D177E, T200A, Q207E, R211K, V245Q | CRF02_AG |
| | AV_M9061N | AV_M9061N | DQ297354 | None | None | | | K20R, V35T, E36D, T39I, E40D, K64KR, K122E, D123N, S162A, K173T, Q174K, D177E, T200A, Q207G, R211K | CRF02_AG |
| | AV_M9218N | AV_M9218N | DQ297360 | None | None | | | V35T, E40D, D121Y, K122E, S162A, K173T, Q174K, D177E, I178L, T200A, Q207E, R211K, V245Q | CRF02_AG |
| Derache (2007) | 1155 | 1155 | EF064447 | None | None | | | E28K, K32E, V35T, E40D, V60I, D123E, I135V, S162A, F171Y, K173T, Q174K, D177E, T200A, Q207E | CRF02_AG |
| | 1163 | 1163 | EF064452 | None | None | | | K20R, V35T, E40D, K49R, V60I, K102Q, S162A, K173T, Q174E, D177E, I178M, T200A, E204K, Q207E, R211G | CRF02_AG |
| | 1175 | 1175 | EF064460 | None | None | | | V35T, E40D, K122E, S162A, K173A, Q174K, D177E, T200A, Q207E | CRF02_AG |
| | 1177 | 1177 | EF064462 | None | None | | | V35T, T39N, E40D, K122E, I135V, S162A, K173T, Q174K, D177E, T200A, Q207E | CRF02_AG |
| | 1191 | 1191 | EF064467 | None | None | | | V35T, T39A, E40D, S68G, K122E, D123N, I135V, E138A, S162A, K173T, Q174K, D177E, I178M, T200A, Q207D, R211K | CRF02_AG |
| | 1210 | 1210 | EF064478 | None | None | | | V35T, E36D, T39A, E40D, K49R, D123N, I135T, S162A, K173T, Q174E, D177E, Q207A, R211K, F214L | CRF02_AG |
| | 1234 | 1234 | EF064489 | None | None | | | K20R, V35T, T39S, E40D, K49R, V60I, S162A, K173T, T200A, Q207E | CRF02_AG |
| | 1269 | 1269 | EF064508 | None | None | | | V35A, T39A, E40D, D121Y, K122E, A158S, I159V, S162A, F171Y, K173T, Q174K, D177E, T200A, Q207E | CRF02_AG |
| | 1274 | 1274 | EF064513 | None | None | | | V35P, E36D, E40D, K49R, V60I, D121H, K122E, I135V, S162A, T165I, K173A, Q174R, D177E, I178M, V179I, T200A, Q207E, R211K | CRF02_AG |
| | 1298 | 1298 | EF064524 | None | None | | | V35T, T39I, E40D, K49R, I135V, S162A, E169A, K173T, Q174R, D177E, I178M, V189I, T200A, Q207E, R211K, W212G | CRF02_AG |
| Holguin (2007) | 603697 | 603697 | EF583234 | None | None | | | V35T, E36D, T39A, E40D, D123E, S162A, K173T, Q174K, D177E, G196E, T200A, Q207E, P243T, V245N, E248D, T286A, V292I, I293V, K311R, S322T | CRF02_AG |
| | 612835 | 612835 | EF583260 | None | None | | | K20R, V35P, E36D, T39A, E40D, K102Q, K122KE, N147K, S162G, T165P, K173T, Q174K, D177E, T200A, E204Q, Q207E, R211K, F214L, V245Q, T286A, E291D, V292I, I293V, P294T, S322T, A327V | CRF02_AG |
| McNulty (2007) | Cam35 | Cam35PL | DQ869219 | None | None | | | V35T, T39N, E40D, V60I, K104R, K122E, D123S, I135T, I142V, K173A, T200TA, Q207E, R211K, V245Q | CRF02_AG |
| | Cam25 | Cam25PL | DQ869231 | None | None | | | V35T, E40D, I135V, S162A, L168X, K173X, Q174E, D177E, T200A, Q207E, V245K | CRF02_AG |
| Sagoe (2007) | 103 | GHN103 | EF174567 | None | None | | | V35T, E36ED, E40D, D123E, I135V, S162A, K173T, Q174R, D177E, T200A, Q207E, R211RK, V245KM, K281R, T286A, E291D, V292VI, I293V, P294T, S322T, I326V | CRF02_AG |
| | 71 | GHN71 | EF550535 | None | None | | | K20R, V35T, E36D, E40D, V60I, I135V, S162A, K173T, Q174E, D177E, I178M, T200A, E204K, Q207E, L228Q, P243T, V245Q, A272P, K277R, T286A, V292I, I293V, P294T, S322T | CRF02_AG |
| Sanchez Onoro (2007) | 603697 | 603697 | | None | None | | | V35T, E36D, T39A, E40D, D123E, S162A, K173T, Q174K, D177E, G196E, T200A, Q207E, P243T, V245N, E248D, T286A, V292I, I293V, K311R, S322T | CRF02_AG |
| Vicenti (2007) | 5491 | 74413R | EF376888 | None | None | | | P4S, V35T, E40D, I135V, S162A, K173I, Q174K, D177E, T200A, Q207E, R211K | CRF02_AG |
| Caron (2008) | 1296 | Gab1296RT | EU556440 | None | None | | | E40D, K104R, K122E, D123S, S162F, K173A, Q174K, D177E, T200A, Q207E, R211K | CRF02_AG |
| Delgado (2008) | GH_006 | GH_006 | EU177883 | None | None | | | V35T, T39A, E40D, K49R, K122Q, I135V, S162A, E169R, K173T, Q174E, D177E, T200A, Q207E, R211K, P243PT, V245KQ, D250E, T286A, E291D, V292I, I293V, P294T, S322T | CRF02_AG |
| | GH_019 | GH_019 | EU177896 | None | None | | | I31L, V35T, E40D, V60I, D121H, K122E, I135T, I142V, S162A, K173T, Q174K, D177E, I178V, G196E, T200A, Q207E, V245E, R284K, T286A, E291D, V292I, I293V, P294T, E297N | CRF02_AG |
| | GH_028 | GH_028 | EU177904 | None | None | | | V35T, E40D, V60I, K122P, I135V, S162A, K173KT, Q174E, D177E, T200A, Q207E, V245N, K277R, T286A, A288G, I293V, P294A, S322A | CRF02_AG |
| | GH_081 | GH_081 | EU177945 | None | None | | | V35IMT, E36ED, T39A, E40D, I135IV, S162AG, K173KT, Q174N, D177E, T200A, Q207E, R211K, P243A, V245Q, D250E, T286A, E291D, V292I, I293V, P294T, K311R, S322T | CRF02_AG |
| | GH_083 | GH_083 | EU177947 | None | None | | | T27S, V35T, E36D, T39A, E40D, K102KR, K122KE, D123DN, I135L, S162A, K173T, Q174K, N175Y, D177E, I178M, T200A, Q207E, V245Q, K275Q, T286A, K287R, E291D, I293V, P294AV, S322T | CRF02_AG |
| | GH_086 | GH_086 | EU177950 | None | None | | | P4S, V35T, T39K, E40D, K122P, I135V, S162A, K173T, Q174K, D177E, T200A, Q207E, R211K, F214L, V245Q, T286A, E291D, V292I, I293V, S322T | CRF02_AG |
| | GH_091 | GH_091 | EU177954 | None | None | | | V35T, E36D, E40D, D121H, K122E, I135T, I142V, S162A, T165TI, K173T, Q174K, D177E, I178V, G196E, T200A, Q207E, V245E, D250DE, S251C, K281R, R284K, T286A, E291D, V292I, I293V, P294T, E297N | CRF02_AG |
| | GH_159 | GH_159 | EU178001 | None | None | | | V35T, T39TA, E40D, V60VI, K122E, I135V, S162A, K173T, Q174K, D177E, I178M, T200A, Q207E, R211K, P243A, V245Q, K281R, T286A, E291D, V292I, I293V, P294IT, A299AV | CRF02_AG |
| Derache (2008) | BKO-879 | BKO-879 | EU330647 | None | None | | | Q23P, V35T, E40D, V60I, S68G, D123E, I135V, E138A, S162A, K173T, Q174N, T200A, Q207E, R211K, F214L | CRF02_AG |
| | BKO-894 | BKO-894 | EU330654 | None | None | | | V35T, E40D, K122P, I135V, S162H, K173L, D177G, V179I, T200A, Q207D, R211K | CRF02_AG |
| | BKO-896 | BKO-896 | EU330655 | None | None | | | K22N, V35T, E36D, T39A, E40D, K49R, I135V, S162T, K173T, Q174K, D177E, I178M, V189I, T200A, Q207E | CRF02_AG |
| | BKO-903 | BKO-903 | EU330659 | None | None | | | K20R, V35T, E36D, T39A, E40D, K49R, K122E, I135V, S162A, K173T, Q174K, D177E, I178M, T200A, Q207E | CRF02_AG |
| | BKO-953 | BKO-953 | EU330682 | None | None | | | K22N, V35T, E36D, T39A, E40D, K49R, K122E, D123N, I135T, A158S, S162A, T165I, K173T, I195L, T200A, I202V, R211K | CRF02_AG |
| | BKO-1048 | BKO-1048 | EU330728 | None | None | | | K11T, V35T, E36D, E40D, K49R, S162A, E169Q, K173E, Q174K, N175Y, D177E, T200A, Q207E, R211K | CRF02_AG |
| | BKO-1059 | BKO-1059 | EU330735 | None | None | | | K20R, V35T, E40D, K43N, K49R, V60I, K122E, S162A, E169Q, K173T, Q174K, D177E, I178L, T200A, Q207E, R211K | CRF02_AG |
| | SGO-33 | SGO-33 | EU330777 | None | None | | | E29P, V35T, E40D, K49R, V60I, S162A, S163T, P170L, K173T, Q174E, E194Q, T200A, Q207E, Q222P | CRF02_AG |
| | SGO-44 | SGO-44 | EU330788 | None | None | | | T27P, V35T, E36D, T39A, E40D, S68G, D123E, I135V, I159V, S162A, T165I, K173T, Q174K, D177E, T200A, Q207E | CRF02_AG |
| | SGO-54 | SGO-54 | EU330798 | None | None | | | P19L, V35T, E40D, K49R, D123E, I142T, S162A, K173T, Q174K, D177E, T200A, Q207A, R211K, Q242P | CRF02_AG |
| | SGO-98 | SGO-98 | EU330838 | None | None | | | V21G, V35T, T39A, E40D, I135T, S162A, K173T, Q174K, D177E, G196E, Q207E, R211K | CRF02_AG |
| Holguin (2008) | SP96-301233 | SP96-301233 | EU255442 | None | None | | | E28A, V35T, E36D, E40D, V60I, K122KEGR, D123X, I135V, S162A, K173AITV, Q174K, D177E, T200A, Q207E, R211RK, F214L, V245Q, T286A, E291D, I293V, S322T, I326V | CRF02_AG |
| | SP54-131243 | SP54-131243 | EU342767 | None | None | | | V35T, E36D, E40D, K49R, V60I, V90I, K104R, K122E, S162A, K173T, Q174K, D177E, V189I, T200A, Q207E, R211K | CRF02_AG |
| | SP8-215375 | SP8-215375 | EU342775 | None | None | | | M16T, V35T, T39A, E40D, K122E, S162A, Q174N, D177E, T200A, Q207E, R211K | CRF02_AG |
| | SP10-215375 | SP10-215375 | EU342777 | None | None | | | M16T, V35T, T39A, E40D, K122E, S162A, Q174N, D177E, T200A, Q207E, R211K | CRF02_AG |
| | SP24-215375 | SP24-215375 | EU342816 | None | None | | | M16T, V35T, T39A, E40D, K122E, S162A, Q174N, D177E, T200A, Q207E, R211K | CRF02_AG |
| | SP4-301233 | SP4-301233 | EU342788 | None | None | | | E28A, V35T, E36D, E40D, V60I, K122M, I135V, S162A, K173E, Q174K, D177E, T200A, Q207E, F214L, V245Q, T286A, E291D, I293V, S322T, I326V | CRF02_AG |
| | SP5-302731 | SP5-302731 | EU342789 | None | None | | | V35T, T39A, E40D, I135V, I142V, S162A, K173T, Q174K, D177E, I178M, T200A, Q207D, R211K, V245Q, K281R, L283I, T286A, I293V, P294T, L295M, S322T | CRF02_AG |
| | SP17-331966 | SP17-331966 | EU342800 | None | None | | | T7P, K11S, V35T, E36D, E40D, K49R, V60I, D123N, I135V, S162A, K173S, D177E, V179I, T200A | CRF02_AG |
| | SP27-339625 | SP27-339625 | EU342803 | None | None | | | P4S, V35T, E36D, E40D, K43R, K49R, K122E, S162A, K173A, Q174E, D177E, V179I, I195T, T200A, Q207N, R211T | CRF02_AG |
| McConnell (2008) | NV72 | NV72 | EU288157 | None | None | | | T39R, E40D, K43Q, S48T, V60I, K122E, D123E, S162A, K173T, Q174K, T200A, Q207E, R211K, V245Q | CRF02_AG |
| Ndembi (2008) | CMYD-11 | 04CMYD-11 | DQ990386 | None | None | | | V35I, E40D, K49R, K122E, D123G, I135V, S162A, K173T, Q174K, D177E, T200A, Q207A, R211K | CRF02_AG |
| | CMYD-49 | 04CMYD-49 | DQ990415 | None | None | | | V35T, E40D, K49R, V60I, K122E, D123S, I135V, S162A, K173T, Q174K, D177E, I178M, T200A, E204D, Q207T, R211K, E224D | CRF02_AG |
| | CMYD-96 | 04CMYD-96 | DQ990450 | None | None | | | V35T, E36D, T39A, E40D, K104R, K122E, D123S, I135T, S162A, K173T, Q174N, D177E, I178V, T200A, Q207A, R211K | CRF02_AG |
| Aghokeng (2009) | CYM200 | CYM200 | GU191570 | None | None | | | E6K, K32R, V35T, E40D, K122E, S162A, K173T, Q174E, D177E, Q207E, V245E, S251N, K281R, T286A, E291D, V292I, I293V, P294I, E297K, S322A, I326V, G335D, R356K, M357R, G359S, T369V, A371V, I375V, A376N, K390R, T403Q, W410C, E413D | CRF02_AG |
| | CYO007 | CYO007 | GU191578 | None | None | | | V35T, E40D, S68SG, R78RK, I135V, S162A, K173T, Q174R, D177E, T200E, E203Q, Q207D, R211K, V245Q, E248KN, K277R, T286A, V292I, I293V, P294AT, S322T, G335D, R356K, M357R, R358K, G359S, Q367L, I375V, V381I, K390R, T403M | CRF02_AG |
| | CDL82 | CDL82 | GU191598 | None | None | | | V35T, T39A, E40D, K122E, D123S, I142V, S162A, K173T, Q174K, D177E, I178M, T200V, Q207A, R211K, P243T, V245Q, T286A, E291D, V292I, I293V, P294T, S322T, I326V, R356K, M357K, G359S, A371V, I375V, T377L, K390R, T403M | CRF02_AG |
| | CDC0028 | CDC0028 | GU191627 | None | None | | | V35T, E36D, E40D, K43N, K49R, D123E, S162A, F171Y, K173T, Q174K, D177E, G196E, T200A, Q207E, V245Q, E248DN, A272P, K277R, T286A, E291S, V292I, I293V, S322A, G335D, R356K, M357K, G359S, T369V, A371V, I375V, A376AS, K390R, A400AV, T403M | CRF02_AG |
| | CDC0013 | CDC0013 | GU191628 | None | None | | | V35T, E40D, K49R, V60I, K102Q, I135V, S162A, E169EK, K173T, Q174K, D177E, I178M, Q197QK, T200A, Q207E, V245E, T286A, E291D, V292I, I293V, S322A, I326V, G335D, F346FL, R356K, M357K, G359S, A371V, I375V, A376AT, T377TIM, S379SG, K390R, T403M, E413D | CRF02_AG |
| | DG456 | DG456 | GU191640 | None | None | | | V35T, E40D, K122P, I135IV, S162A, K173T, Q174K, D177E, I195L, T200A, Q207E, F214L, V245Q, E248D, D250EK, S251SN, T286A, E291D, V292I, I293V, P294I, S322T, I326V, G335D, R356K, M357K, G359S, A371V, I375V, S379G, A400T | CRF02_AG |
| | AV_0145 | AV_0145 | GU191648 | None | None | | | V35T, E36D, E40D, K49R, V60VI, K104R, K122KE, D123X, I135IV, S162A, K173T, Q174K, D177E, T200A, Q207E, P243PT, V245Q, K281R, T286A, E291D, V292I, I293V, P294T, R307K, S322A, I326V, G335D | CRF02_AG |
| Ayouba (2009) | TE10030 | TE10030RT | GQ351751 | None | None | | | T39A, E40D, K104R, I135V, S162A, K173T, Q174N, D177E, T200A, Q207E, R211K, V245Q | CRF02_AG |
| | RES631 | RES631RT | GQ351770 | None | None | | | E40D, K122E, D123E, I135V, S162A, K173T, Q174R, D177E, I178M, T200A, Q207A, R211K, V245T | CRF02_AG |
| | RES634 | RES634RT | GQ351772 | None | None | | | T39A, E40D, K122E, D123N, I135V, S162A, K173A, Q174K, D177E, I178M, T200A, Q207E, V245E, E248D | CRF02_AG |
| | RES649 | RES649RT | GQ351776 | None | None | | | E40D, K122P, D123E, S162A, K173R, D177E, I178M, T200A, E204K, Q207E, R211K, V245T | CRF02_AG |
| | RES008 | RES008-9RT | GQ351778 | None | None | | | T39A, E40D, V60I, V106I, D123E, I135V, I142V, S162A, K173A, D177E, V179I, I195L, T200S, I202V, Q207A, R211K, V245M | CRF02_AG |
| | RES250 | RES250-8RT | GQ351797 | None | None | | | E40D, I135V, E138A, S162A, K173I, Q174K, D177G, T200A, Q207G, R211K, V245T | CRF02_AG |
| | 0.243 | 0.243-FRT | GQ351868 | None | None | | | V35T, T39A, E40D, K64R, D123N, I135V, S162A, K173I, Q174K, D177E, I180V, T200A, Q207E, V245E | CRF02_AG |
| | 0.427 | 0.427-ART | GQ351872 | None | None | | | V35T, E36D, E40D, K49R, D123E, S162A, K173T, Q174R, D177E, T200A, Q207E, R211K, E224D | CRF02_AG |
| | 0.615 | 0.615-SRT | GQ351880 | None | None | | | V35T, E36D, E40D, K49R, D121Y, K122E, I135T, S162A, K173T, Q174R, D177E, D192N, G196E, T200A, Q207E, R211K | CRF02_AG |
| | 2889 | 2889HALDRT | GQ351925 | None | None | | | V35T, T39A, E40D, K49R, K104R, I135V, S162A, K173T, Q174K, D177E, I178M, T200A, Q207E, V245Q | CRF02_AG |
| | 2897 | 2897HALDRT | GQ351926 | None | None | | | V35T, E36D, E40D, K104R, K122E, D123S, S162A, K173A, Q174K, D177E, I178M, T200A, Q207E, V245R | CRF02_AG |
| | 2929 | 2929HALDRT | GQ351933 | None | None | | | E29D, K30KQ, K32R, V35T, E40D, K43R, K49R, K122KE, D123H, S162A, K173T, Q174K, D177E, T200A, Q207A, R211K, V245Q | CRF02_AG |
| | 2934 | 2934HALDRT | GQ351935 | None | None | | | V35T, T39A, E40D, S48T, V60I, I135V, S162A, K173T, Q174K, D177E, T200A, Q207E, R211K | CRF02_AG |
| | 2879 | 2879HALDRT | GQ351936 | None | None | | | V35T, T39A, E40D, I135V, I142V, S162A, K173T, Q174E, D177E, T200A, Q207E, V245Q | CRF02_AG |
| Bartolo (2009) | SNS40 | 01AOSNS40 | EU068446 | None | None | | | V35T, T39A, E40D, S162C, K166R, K173I, Q174K, T200V, Q207A, R211K, V245Q, E248D, D250E, V276I, R284K, T286A, E291D, V292I, I293V, P294T | CRF02_AG |
| Cuevas (2009) | P0903 | P0903.1 | EU822528 | None | None | | | M16T, V35T, T39A, E40D, K122E, D123G, I135V, S162A, K173T, Q174N, D177E, T200A, Q207E, R211K | CRF02_AG |
| | P1423 | P1423.1 | EU822650 | None | None | | | V35T, E36D, E40D, K49R, V60VIM, K102KQ, K122KE, D123E, S162A, K173T, Q174K, D177E, G196E, Q197QK, T200A, Q207EG, R211RK | CRF02_AG |
| Mintsa-Ndong (2009) | MKK235 | MKK235 | AM903430 | None | None | | | V35T, E40D, K49R, V60I, I135V, S162A, K173T, Q174K, D177E, I178M, T200A, Q207G, R211K, V245M | CRF02_AG |
| Tebit (2009) | TR106 | TR106 | FJ577285 | None | None | | | V35T, E40D, K49R, S162A, K173T, Q174K, D177E, T200A, Q207E, R211K, V245E, K281R, T286A, E291D, V292I, I293V | CRF02_AG |
| | TR156 | TR156 | FJ577309 | None | None | | | A33P, V35T, T39A, E40D, S68G, K122E, D123N, S162A, F171Y, Q174D, D177E, T200A, Q207E, R211K, L228Q, V245E, K277R, T286A, E291D, V292I, I293V, E297K, L310I | CRF02_AG |
| | TR158 | TR158 | FJ577310 | None | None | | | V35T, E36D, E40D, K49R, V60I, K122Q, S162A, K173T, Q174K, D177E, G196E, T200A, Q207E, F214L, P236S, V241VG, V245E, E248D, D250E, A272P, T286A, E291D, V292I, I293V | CRF02_AG |
| Vercauteren (2009) | pt2048 | 0IK0wpUYxR | GQ398976 | None | None | | | V35T, T39A, E40D, I135V, S162A, K173T, Q174R, N175H, D177E, T200A, I202V, Q207E, R211K, F214L, V245Q | CRF02_AG |
| | pt1765 | 2793001530 | GQ399259 | None | None | | | E40D, K49R, D123E, S162A, K173T, Q174K, D177E, G196E, T200A, Q207E, V245Q | CRF02_AG |
| | pt1720 | 3043522319 | GQ399304 | None | None | | | E40D, I135V, S162A, K173T, Q174K, D177E, D192N, T200A, Q207E, R211RK | CRF02_AG |
| | pt1702 | 3147817392 | GQ399322 | None | None | | | V35T, E40D, D123E, I135V, S162A, T165I, K173T, Q174K, D177E, I178V, T200A, Q207E, F214L, V245Q, E248N, K277R, T286A, E291D, V292I, I293V, P294T, S322T, I326V | CRF02_AG |
| | pt1597 | 3761322449 | GQ399427 | None | None | | | V35T, E36D, E40D, K49KR, K102KQ, E138A, S162A, K173T, Q174K, D177EG, G196E, T200A, Q207EG, F214FL, V245M, E248DN, D250E, S251SDGN, T286A, A288S, E291ED, V292I, I293V | CRF02_AG |
| | pt1480 | 4401747108 | GQ399544 | None | None | | | V35T, E36D, E40D, K49R, V60I, I135V, S162C, K173I, Q174K, D177E, T200A, Q207E, R211K, V245E, S251C, K281R, T286A, E291D, V292I, I293V, P294T, P321S, S322T, I326V | CRF02_AG |
| | pt1472 | 4459474977 | GQ399552 | None | None | | | V35T, E40D, S162A, K173T, Q174K, D177E, Q197QH, T200A, Q207E, R211K, V245Q, E248EDKN, S251SN, K281R, T286A, E291D, V292I, I293V, P294T, V317A | CRF02_AG |
| | pt1391 | 4899365714 | GQ399633 | None | None | | | V35T, E40D, K122P, I135IV, S162A, K173T, Q174K, P176AS, D177E, I178IM, G196E, T200A, I202IV, Q207AG, R211RK, V245Q, E248D, D250E, V292I, I293V, E297A | CRF02_AG |
| | pt1217 | 5891743426 | GQ399807 | None | None | | | V35T, T39A, E40D, V118I, D123E, I135V, T165I, K173A, Q174K, D177E, T200A, Q207E, F214L, P243T, V245Q, S251H, K275R, V276I, T286A, E291D, V292I, I293V, E297K, S322T, I326V | CRF02_AG |
| | pt1005 | 7175792939 | GQ400019 | None | None | | | V35T, E40D, D123E, S162A, K173T, Q174K, D177E, G196E, T200A, Q207E, V245Q, T286A, K287R, E291D, V292I, I293V, P294T, K311R, S322T, I326V | CRF02_AG |
| | pt822 | 8257904274 | GQ400202 | None | None | | | T39A, E40D, V60VI, K64R, S68G, D123N, I135V, S162A, K173T, Q174K, D177E, I178M, T200A, Q207E, R211K, P243T, V245Q | CRF02_AG |
| | pt330 | JiHkMMZP2b | GQ400694 | None | None | K219KR | | V35T, E40D, V60I, S68G, V90I, I135V, S162A, T165I, K173T, Q174K, D177E, T200A, Q207E, R211K, V245Q, I274IV, T286A, E291D, V292I, I293V, P294T, I309L, S322T, G335D | CRF02_AG |
| | pt296 | LbCZxpzfm9 | GQ400728 | None | None | | | V35T, E36D, E40D, V60I, D123N, I135V, S162A, K173T, Q174K, D177E, T200A, Q207E | CRF02_AG |
| | pt250 | NaZmGgML8D | GQ400774 | None | None | | | E6A, V35T, E36D, T39A, E40D, K101Q, K122A, S162A, K173T, Q174E, D177E, I178M, T200A, E204K, Q207E, V245Q, T286A, E291D, V292I, I293V, P294T, K311R, S322T, G335D | CRF02_AG |
| | pt192 | puEFbes1xR | GQ400832 | None | None | | | V35T, E40D, V90I, D123E, S162A, K173T, Q174K, D177E, G196E, T200A, Q207E, R211K | CRF02_AG |
| | pt76 | VVGOOO99hg | GQ400948 | None | None | | | V35T, E40D, K102R, I135V, S162A, K173T, Q174K, D177E, T200A, Q207G, V245Q, E248N | CRF02_AG |
| Yaotse (2009) | HT037 | 06TG.HT037 | FM955682 | None | None | | | V35T, E40D, V60I, K122P, A158S, S162A, K173T, Q174K, D177E, T200A, Q207E, V245T, E248D, K281R, T286A, E291D, V292VI, I293V, P294T, K311R, S322T, I326V, G335D, R356K, M357K, G359S, K366R, T369V, V372VI, I375V, A376C, K390R, T403M, P412L, E413L, E432D, V435L | CRF02_AG |
| | HT050 | 06TG.HT050 | FM955689 | None | None | | | V35T, E36D, E40D, K122P, I135V, S162A, F171Y, K173T, Q174K, D177E, T200A, Q207N, V245T, K281R, T286A, E291D, I293V, L310I, S322T, I326V, G335D, R356K, M357K, G359S, A371V, I375V, S379G, K390R, K395R, T403M, E404D, E432D | CRF02_AG |
| | HT060 | 06TG.HT060 | FM955696 | None | None | | | V35T, E36D, E40D, K102R, K122P, I135V, S162A, E169K, K173T, Q174K, D177E, V189I, T200A, Q207K, R211K, V245Q, A272S, T286D, E291D, V292I, I293V, E297K, S322T, I326V, G335D, R356K, M357K, G359S, T369V, I375V, K390R, K395R, T403M, E432D | CRF02_AG |
| | HT076 | 06TG.HT076 | FM955709 | None | None | | | K20R, V35T, E36D, E40D, K64R, K122P, I135V, S162A, K173R, Q174K, D177E, T200A, E204K, Q207D, R211K, P243T, V245Q, K281R, T286A, E291D, V292I, I293V, S322T, I326V, G335D, R356K, M357K, G359S, A371V, I375V, T377I, K390R, E399D, T403M, E432D, V435I | CRF02_AG |
| | HT090 | 06TG.HT090 | FM955718 | None | None | | | V35T, E40D, V60I, I135V, S162A, K173M, Q174K, D177E, T200A, E204D, Q207E, R211K, F214L, V245Q, E248D, T286A, E291D, V292I, I293V, P294T, E297R, S322T, I326V, G335D, R356K, M357K, G359S, K366R, T369V, A371V, I375V, K390R, T403M, E432D | CRF02_AG |
| | HT134 | 06TG.HT134 | FM955731 | None | None | | | V35T, T39A, E40D, V60I, D123E, I135L, S162A, K173A, Q174R, D177E, I178L, T200A, Q207D, R211K, V245Q, D250E, A272P, K277R, L283I, T286TA, A288S, E291D, V292I, I293V, P294T, L295M, T296S, S322T, G335D, R356K, M357K, G359S, A371V, I375V, T377V, K390R, T403M, E404D, E432D, V435I | CRF02_AG |
| Yebra (2009) | SP12-331966 | SP12-331966 | EU255385 | None | None | | | E40D, V60I, D123N, I135V, S162A, K173S, D177E, V179I, G196GE, T200A, Q207A, R211K, V245Q | CRF02_AG |
| | SP15-339625 | SP15-339625 | EU255388 | None | None | | | V35T, E36D, E40D, K43R, K49R, K122E, S162A, E169X, K173A, Q174EK, D177E, V179I, I195T, T200A, Q207N, R211T, V245Q, E248D, K277R, T286A, E291D, V292I, I293V, P294T, I326V | CRF02_AG |
| | SP69-267096 | SP69-267096 | EU342827 | None | None | | | K20R, V35T, T39N, E40D, V60I, I135V, T139TA, S162A, K173I, Q174K, D177E, V179I, T200A, I202V, Q207G, R211E, V245KQ, D250DE, A272G, T286A, E291D, V292I, I293V, P294T, S322T, I326V | CRF02_AG |
| Bonura (2010) | 995_98 | 995_98 | GU969580 | None | None | | K103N | V21I, V35T, T39A, E40D, V60I, I135V, S162A, K173T, Q174K, D177E, I178M, T200A, Q207E, R211K, F214L, L228Q, V245E, T286A, E291D, V292I, I293V, S322T | CRF02_AG |
| Burda (2010) | 06BDHS020 | 06BDHS020 | GQ344964 | None | None | | | V35T, E36D, T39A, E40D, I135V, S162A, F171Y, K173T, Q174K, D177E, T200A, Q207E, V245Q, K281R, T286A, A288K, E291D, V292I, I293V, P294T, V317A, D320E, S322T, D324E, I326V, G335D, R356K, M357K, G359S, V365I, A371V, I375V, T377L, K390R, T403M, E432D, V435X | CRF02_AG |
| | 06LPH21ZC | 06LPH21ZC | GQ344970 | None | None | | | T27S, V35T, T39A, E40D, D86E, D121Y, K122E, I135V, S162A, K173T, Q174K, D177E, T200A, Q207E, V245Q, T286A, V292I, I293V, S322A, G335D, R356K, M357K, R358K, G359S, I375V, K390R, K395R, T403A, E432D, V435I, A437V | CRF02_AG |
| Carr (2010) | 0144ND | 01CM.0144ND | GU201495 | None | None | | | V35T, T39A, E40D, D121H, K122E, D123E, S162A, K173A, Q174E, D177K, T200A, Q207E, R211K, V245Q, A272P, T286A, E291D, V292I, I293V, P294T, S322A, I326V, G335D, R356K, M357R, G359S, T369A, A371V, T377V, K390R, A400T, T403L, E432D, V435I, D471E, Q480H, L491S, K512R, S519N, Q524K, K527E, E529D, A534S, A554N, K558R, V559I | CRF02_AG |
| Castro (2010) | PHI-4 | PHI-4 | GQ131599 | None | None | | | P14T, V35T, E40D, I135V, S162A, F171Y, K173T, Q174K, D177E, T200A, I202V, Q207E, R211S, F214L, V245Q | CRF02_AG |
| | PHI-20 | PHI-20 | GQ131615 | None | None | | | V35T, C38CW, T39A, E40D, I132V, I135V, S162A, K173T, Q174R, N175H, D177E, T200A, I202V, Q207K, R211K, F214L, Q242X, V245Q | CRF02_AG |
| Chin (2010) | K327 | K327 | GQ290743 | None | None | | | P4N, E6D, P14E, V35T, E36D, E40D, D121Y, K122E, S162A, K173T, Q174K, D177E, Q197L, T200A, Q207A, R211K, V245Q, E248D, T286A, A288S, E291D, V292I, I293V, P294T, S322T | CRF02_AG |
| Descamps (2010) | 13odyssee | 13odyssee | HQ717848 | None | None | | | V35T, E36D, E40D, K122P, I135V, A158S, S162A, K173T, Q174K, D177E, T200A, Q207A, R211K | CRF02_AG |
| | 26odyssee | 26odyssee | HQ717861 | None | None | | | V35T, E36D, E40D, K122P, I135V, A158S, S162A, K173T, Q174R, D177E, I178L, T200A, Q207A, R211K | CRF02_AG |
| | 87odyssee | 87odyssee | HQ717922 | None | None | | | V35T, E36D, T39A, E40D, K102KQ, K104R, K122E, D123S, G155E, S162A, K173T, Q174K, D177E, I178M, T200A, Q207E | CRF02_AG |
| | 214odyssee | 214odyssee | HQ718047 | None | None | | | V35T, E40D, K49R, D123E, S162A, T165I, K173T, Q174K, D177E, T200A, Q207E, R211K, F214L, V245Q, A272P, R284K, T286A, E291D, V292I, I293V, P294T, G316S, V317I, Y318I | CRF02_AG |
| | 256odyssee | 256odyssee | HQ718089 | None | None | | | V35T, E36D, T39A, E40D, D121H, K122E, I135T, I142T, S162A, K173T, Q174K, D177E, I178M, T200A, Q207A, R211K, F214L | CRF02_AG |
| | 352odyssee | 352odyssee | HQ718185 | None | None | | | V35T, T39A, E40D, D121H, K122E, S162A, K173T, Q174K, D177E, I178L, T200A, Q207E, R211K | CRF02_AG |
| | 364odyssee | 364odyssee | HQ718197 | None | None | | | V35T, T39A, E40D, I135V, S162A, F171Y, K173A, Q174K, D177E, G196T, T200A, I202V, Q207E, R211K | CRF02_AG |
| | 398odyssee | 398odyssee | HQ718231 | None | None | | | T39S, E40D, K49R, K102E, I135V, S162A, K173AITV, Q174K, D177E, I178M, T200A, E204K, Q207E, V245Q | CRF02_AG |
| | 436odyssee | 436odyssee | HQ718269 | None | None | | | V35T, E40D, V60I, K122E, T139K, K173T, Q174K, N175Y, T200A, Q207E, R211K, F214L | CRF02_AG |
| Diop-Ndiaye (2010) | 34HALD | 34HALD | FN599707 | None | None | | | V35T, E36D, E40D, K49R, I135V, S162A, K173A, Q174R, D177E, I178V, T200A, Q207E, V245K, T286A, E291D, V292I, I293V, P294T, S322T, I326V, G335D, R356K, M357R, G359A, V365I, T369A, E370A, A371V, I375V, A376S, K390R, K395R, T403M | CRF02_AG |
| | 65HALD | 65HALD | FN599721 | None | None | | | V35T, E40D, K122E, I135V, S162A, K173T, Q174K, D177E, I178M, T200A, Q207E, R211K, V245E, T286A, E291D, V292I, I293V, P294T, L295M, S322A, R356K, M357K, R358K, G359S, A371V, K374R, I375V, T377S, K390R, T403M, E432D, V435E | CRF02_AG |
| | 920hald | 920hald | FN599755 | None | None | | | V35T, E36D, E40D, V60VI, D121H, K122E, S162A, K173T, Q174K, D177E, T200A, Q207E, R211RK, V245Q, T286A, E291D, V292I, I293V, P294I, K311R, S322T, I326V, G335D, R356K, M357K, G359S, K366R, T369V, I375V, K390R, T403K | CRF02_AG |
| Djoko (2010) | 666 | CD2865 | FR666666 | None | None | | | V35T, E40D, K49R, V60I, K64R, K104R, K122E, D123N, E169Q, K173AT, Q174K, D177E, T200A, Q207A, R211RK, V245Q, E248D, D250E, S251D, A272P, T286A, V292VI, I293V, P294T, S322ST, I326IV, G335GD, R356K, M357K, G359S, K366R, T369S | CRF02_AG |
| | 682 | CD4059 | FR666682 | None | None | | | V35T, E40D, K49R, I50V, V60I, K64R, T69S, R78RK, V111VG, K122E, D123G, I142V, K173T, Q174K, D177E, G196E, T200A, Q207E, V245H, A272P, K275R, K277R, T286A, E291D, V292VI, I293V, E312S, K323KR, I329V, Q334L, G335D, M357R, R358K, T369A | CRF02_AG |
| Djoko (2010) | GQ060 | 08GQ060 | FN557327 | None | None | | | K32R, V35T, E40D, K49R, I135V, S162A, K173I, Q174K, D177E, T200A, Q207E, R211T, V245Q, Y271H, T286A, E291D, V292I, I293V, P294T, S322T, I326V, G335D, R356K, M357R, G359T, T369A, E370A, A371V, I375V, T377I, K390R, K395R, A400T | CRF02_AG |
| | GQ058 | 08GQ058 | FN557330 | None | None | | | V35T, E40D, K102R, K103KQ, D121Y, K122E, S162A, F171FY, K173AV, Q174K, D177E, I178L, T200A, Q207EG, R211RK, V245Q, E248D, Y271YH, K277KR, T286A, E291D, V292VI, I293V, P294T, S322A, G335D, R356K, M357R, G359S, T369A, T386V, K390R, K395R | CRF02_AG |
| | GQ269 | 08GQ269 | FN557333 | None | None | | | V35T, E40D, A98S, K122E, I135V, E138A, S162A, K173T, Q174K, D177E, I178V, T200A, Q207E, R211RK, F214L, V245EKQ, D250DE, A272P, E291D, V292I, I293V, N306D, S322T, I326V, G335D, R356RK, M357K, G359S, K366R, A371AV, I375IATV, K390R, T403M | CRF02_AG |
| Hamers (2010) | 300416 | CP076300416 | HM119840 | None | None | | V179E | K20KR, V35T, T39A, E40D, V60I, V118I, D121H, K122E, E138A, I142V, T165I, R172K, K173Q, Q174K, D177E, I178L, T200A, Q207E, R211K, F214L, P243S, V245Q, E248D, A272P, K281R, T286A, E291D, V292I, I293V, P294T, E312D | CRF02_AG |
| Soares (2010) | CM04_042 | CM04_042 | GU366108 | None | None | | | V35T, E40D, S48T, K49R, V60I, K122E, I135V, S162A, K173A, Q174K, D177E, T200A, Q207E, V245Q | CRF02_AG |
| Yang (2010) | 2010693445 | 2010693445 | JQ616885 | None | None | | | P4S, V35T, E36D, T39I, E40D, K49R, V60I, I135V, S162A, K173T, Q174E, D177E, V179I, T200A, E204K, Q207A, R211K, V245Q, P247S | CRF02_AG |
| Yebra (2010) | 107620 | 03SP00107620 | FJ481699 | None | None | | | V35T, E40D, D123E, I135V, S162A, K173T, Q174K, D177E, V189I, Q197E, T200A, I202V, Q207E | CRF02_AG |
| | 401375 | 07SP401375 | FJ481707 | None | None | | | V35T, E40D, V90I, D123E, S162A, K173T, Q174K, D177E, T200A, Q207EK, R211K, V245T, D250E, S251N, T286A, E291D, V292I, I293V, P294T, K311R, S322T | CRF02_AG |
| Aghokeng (2011) | HJ1633 | HJ1633 | JN639463 | None | None | | | V35T, E36D, T39A, E40D, K64R, K122Q, S162A, K173T, Q174K, D177E, T200A, Q207E, V245Q, D250E, K281R, T286A, E291D, V292I, I293V, P294T, S322A, I326V, G335D | CRF02_AG |
| | HJ1958 | HJ1958 | JN639476 | None | None | | | V35T, T39A, E40D, K122E, D123S, S162A, K173T, Q174EK, D177E, T200A, Q207E, R211RK, V245Q, T286A, I293V, P294V, E297K, S322A, I326V, G335D | CRF02_AG |
| | HJ1903 | HJ1903 | JN639487 | None | None | | | V35T, E36D, E40D, K49R, K104KR, K122E, D123N, S162A, K173I, Q174K, D177E, I178M, T200A, Q207E, P243T, V245Q, T286A, E291D, V292I, I293V, P294PT, K311KR, S322A, G335D | CRF02_AG |
| | SK8013-PI | SK8013-PI | HQ864389 | None | None | | | V35T, T39A, E40D, L80LF, I135IV, I142V, S162A, K173T, Q174K, D177E, I178M, T200A, Q207DN, R211K, V245Q, T286A, I293V, P294A, L295M | CRF02_AG |
| | SK1023-PI | SK1023-PI | HQ864404 | None | None | | | K20R, V35T, T39A, E40D, K122E, D123N, S162A, K173L, Q174K, D177DE, I178IM, T200A, Q207G, R211K, V245K, T286A, I293V, P294T | CRF02_AG |
| | SK6027-PI | SK6027-PI | HQ864424 | None | None | | | I2IV, K20KR, V35T, T39AE, E40D, D123E, I135T, S162A, K173T, Q174K, D177E, T200A, I202V, Q207EGKR, R211KT, F214FL, V245Q, K281R, T286A, E291D, V292I, I293V, P294T | CRF02_AG |
| | SK9006-PI | SK9006-PI | HQ864426 | None | None | | | V21I, V35T, E40D, V60VI, K122PQ, S162A, K173T, Q174K, D177E, T200A, Q207E, R211K, V245E, T286A, E291D, V292I, I293V, P294T | CRF02_AG |
| | SK4040-PI | SK4040-PI | HQ864428 | None | None | | | V35T, E40D, K43KR, S48S*AE, K49R, I50IV, V60I, S162A, K173T, Q174K, D177DE, T200A, Q207EG, R211KN, V245Q, T286A, E291D, V292VI, I293V, P294T, L310LI | CRF02_AG |
| | SK5002-PI | SK5002-PI | HQ864432 | None | None | | | V35T, T39A, E40D, K49KR, K102KR, K104KR, I135V, S162A, F171Y, K173T, Q174K, D177E, T200A, Q207K, R211Q, V245Q, K277KR, T286A, E291D, V292VI, I293V, P294T | CRF02_AG |
| | SK3039-PI | SK3039-PI | HQ864439 | None | None | | | V35T, E40D, V60I, D121H, K122E, I135V, I142V, S162A, T165TI, K173KT, Q174A, D177E, Q197QP, T200A, Q207E, R211K, V245Q, A272P, K277R, T286A, E291D, V292VI, I293V, P294T, K311R | CRF02_AG |
| | SK3006-PI | SK3006-PI | HQ864449 | None | None | | V179VD | V35T, E36ED, T39L, E40D, V60I, S68G, D123E, I135V, E138A, S162A, T165TI, K173T, Q174K, D177DE, I178IV, T200A, Q207EG, R211RK, F214FL, P243H, V245Q, K281R, T286A, E291D, V292I, I293V, P294T | CRF02_AG |
| Charpentier (2011) | patng_10 | patng_10 | HQ021240 | None | None | | | E28A, V35T, E40D, K122E, D123N, S162A, K173S, Q174K, N175Y, D177E, I178M, V179L, T200A, Q207D, V245Q | CRF02_AG |
| | patng_17 | patng_17 | HQ021247 | None | None | | | V35T, E36D, T39S, E40D, S68G, V90I, D121H, K122E, I135R, R143RK, S162A, K173AITV, Q174K, D177E, G196E, T200A, Q207E, F214FL, V245Q | CRF02_AG |
| | patng_18 | patng_18 | HQ021248 | None | None | | | V35T, E36D, T39A, E40D, K102R, K122KE, S162A, K173T, Q174R, D177E, V179I, T200A, Q207E, L209LV, R211K, V245Q, E248D, D250E | CRF02_AG |
| | patng_31 | patng_31 | HQ021260 | None | None | | | V35I, T39A, E40D, S68G, V90I, D123E, I135RT, S162A, K173T, Q174K, D177E, I178M, G196E, T200A, Q207G, R211K, V245Q | CRF02_AG |
| | patco_60 | patco_60 | HQ021328 | None | None | | | K30KE, V35T, E36ED, T39A, E40D, S162A, K173T, Q174K, D177E, T200A, Q207T, R211K | CRF02_AG |
| El Annaz (2011) | 7350 | 7350 | HQ393367 | None | None | | | G15R, K20N, K30KE, V35T, T39A, E40D, S68SG, K102Q, K122E, I135T, I142V, S162A, K173T, Q174A, D177E, E194V, T200A, Q207N, R211K, F214L, K219P, E224EG, E233A | CRF02_AG |
| Fokam (2011) | CIRCB-8956 | CIRCB-8956 | JQ796106 | None | None | | | V35T, E40D, K49R, K122E, S162A, K173T, Q174K, D177E, T200A, Q207E, V245Q, E248N, A272P, V276I, T286A, E291D, V292I, I293V, P294T, S322A, I326V | CRF02_AG |
| | CIRCB-11442 | CIRCB-11442 | JQ796135 | None | None | | | V35IT, E36ED, T39TA, E40D, K49KR, K102E, K122E, D123NS, I135T, E138A, S162A, K173T, Q174QHKN, D177E, T200A, Q207E, V245K, E248D | CRF02_AG |
| | CIRCB-12481 | CIRCB-12481 | JQ796142 | None | None | | | V35T, E40D, K49R, K122E, D123S, S162A, F171Y, K173T, Q174K, D177E, T200A, Q207E, R211K, P243A, V245Q, T286A, E291D, I293V, P294T, R307RK, S322A, Q334QR, G335D, R356K | CRF02_AG |
| Hamers (2011) | CP076303489 | CP076303489 | HQ993978 | None | None | | | P4S, V35T, T39A, E40D, S68G, D123E, I135V, S162A, K173I, Q174K, D177E, T200A, Q207E, R211K, F214L, V245Q, K281R, T286A, E291ED, V292I, I293V, P294T, E297D, S322T, I326V | CRF02_AG |
| | CP076303532 | CP076303532 | HQ994013 | None | None | | | V35T, E40D, K122KE, I135V, S162A, K173T, Q174E, D177E, T200A, Q207E, V245Q, E248ED, K281R, T286A, I293V, P294A, S322T, I326V | CRF02_AG |
| | CP076303583 | CP076303583 | HQ994050 | None | None | | | V21I, E28A, V35T, T39A, E40D, V60I, V90I, I135V, S162A, K173T, D177E, T200E, Q207N, R211K, P243A, V245Q, T286A, E291D, V292I, I293V | CRF02_AG |
| | CP076305129 | CP076305129 | HQ994090 | None | None | | | E28A, V35T, E36D, E40D, V60I, K122E, D123N, S162A, K173T, Q174K, D177E, T200A, I202IV, Q207E, R211RK, E224D, V245T, K281R, T286A, E291D, V292I, I293V, P313T, V317A, S322T | CRF02_AG |
| | CP076305132 | CP076305132 | HQ994092 | None | None | | | V35IT, T39TA, E40D, I50IV, K122KEGR, D123E, S162A, K173T, Q174K, D177E, T200A, Q207EG, R211K, V245E, A272P, K281KR, T286A, E291D, V292I, I293V, P294AT | CRF02_AG |
| | CP076305201 | CP076305201 | HQ994137 | None | None | | V179VE | V35T, T39TA, E40D, M41MT, E44G, G45E, K46E, K49R, V60I, V118VI, D123X, T139TS, I142T, K173T, Q174K, D177DE, G196E, T200A, Q207A, R211T, F214FL, V245M, T286A, E291D, V292I, I293V, S322T, L325I | CRF02_AG |
| | CP076305207 | CP076305207 | HQ994142 | None | None | | | P4H, K20R, V35T, T39A, E40D, K122E, D123G, I135V, S162A, K173T, Q174K, D177E, I178IM, T200A, I202V, Q207K, R211Q, F214L, V245Q, E248D, T286A, E291D, I293V, P294T, V317T, S322T | CRF02_AG |
| Ajoge (2012) | H10 | HR10 | HM854132 | None | None | M184T | | V35T, E40D, V60I, K122E, D123S, S162A, K173T, Q174E, D177E, T200A, Q207K, R211K, V245Q, E248D, A272P, K275Q, T286A, E291D, V292I, I293V, P294A, I326V, G335D, M357R, G359S, T369V, I375V, A376S, K390R, T403M, K431R, E432D, V435I | CRF02_AG |
| | H37 | HR37 | HM854145 | None | None | | | V35M, T39A, E40D, W88C, A98S, K122E, I135V, S162A, K173A, Q174K, D177E, I178V, T200A, I202V, R211E, V245M, S251H, K275Q, V276T, T286A, E291D, V292I, I293V, P294T, S322T, I326V, R356K, M357K, G359S, T369A, A371V, I375A, A376S, K390R, A400T, E432D, V435D, G436E | CRF02_AG |
| Akrim (2012) | S27AGAG | S27AGAG | JQ344203 | None | None | K65KN | | K32E, V35T, E40D, K49R, V60I, S162E, K173T, Q174K, D177E, T200A, Q207E, R211K, F214L, K220KI | CRF02_AG |
| Caron (2012) | Gab014129 | Gab014129 | HQ541894 | None | None | | | V35T, T39A, E40D, I135V, S162A, K173I, Q174K, D177E, T200A, Q207G, R211N, V245Q, E248D, D250E | CRF02_AG |
| | Gab031225 | Gab031225 | HQ541908 | None | None | | | P4S, V35T, E40D, K64R, D123E, I135V, S162A, K173A, Q174K, T200E, E203Q, Q207D, V245K | CRF02_AG |
| | Gab051079 | Gab051079 | HQ541917 | None | None | | | S3I, P4L, V8G, V35T, E40D, D121H, K122E, I135T, S162A, K173A, Q174R, D177E, T200A, Q207E, R211K, V245Q | CRF02_AG |
| | Gab071263 | Gab071263 | HQ541927 | None | None | | | V35T, E36D, E40D, T69S, D123E, S162A, K173T, Q174K, D177E, T200V, Q207N, E248K, D250E | CRF02_AG |
| | Gab081178 | Gab081178 | HQ541955 | None | None | | | V35T, T39N, E40D, K49R, I50V, V60I, K173S, T200A, Q207E, V245Q | CRF02_AG |
| | Gab091163 | Gab091163 | JN705006 | None | None | | | V35T, T39N, E40D, V60I, D121H, K122E, D123G, S162A, K173T, Q174N, D177E, T200A, Q207E, V245Q | CRF02_AG |
| Chamberland (2012) | C401S | C401S | HQ267535 | None | None | | | V35T, E40D, K49R, V60I, V90I, I135V, S162A, K173T, Q174R, D177E, I178M, T200A, Q207E, V245K, K277T, K281R, T286V, E291D, I293V, P294T, E297R, I326IV, G335GD, R356RK, R358K, G359S, T369A, A371AV, I375V, K390KR, K395KR, A400AT, T403M | CRF02_AG |
| | C412S | C412S | HQ267542 | None | None | | | V35T, T39A, E40D, D123E, I135V, I142V, S162A, E169Q, K173T, Q174E, D177E, T200A, Q207N, V245R, K249Q, T286A, E291D, V292I, I293V, K311R, S322T, G335D, R356K, M357R, G359S, A371V, I375V, T377L, K390R, K395R, T403M, E413D, V435M, E438X | CRF02_AG |
| | C442S | C442S | HQ267567 | None | None | | V108VI | V35T, T39A, E40D, V60I, I135V, I142V, S162A, K173AT, Q174E, D177E, T200A, P243T, V245Q, Y271F, T286A, E291D, V292I, I293V, P294T, S322T, I326V, G335D, R356K, M357R, G359S, A371V, K390R, T403R, K431AT | CRF02_AG |
| | C456S | C456S | HQ267575 | None | None | | | V35T, E36ED, E40D, K49R, V60I, I135V, S162A, K173T, Q174K, D177E, G196E, T200V, Q207E, L210M, E224D, V245Q, A272P, K281R, T286A, E291D, V292I, I293V, P294T, R307K, E312D, S322T, I326L, G335D | CRF02_AG |
| | C475S | C475S | HQ267585 | None | None | | | V35T, E36D, E40D, K49R, V60I, I135L, S162A, K173I, Q174K, D177E, T200A, Q207DGNS, R211K, V245Q, T286A, A288T, E291D, V292I, I293V, P294T, S322T, I326V, G335D, F346Y, R356K, M357R, G359S, I375V, T377V, K390R | CRF02_AG |
| | C480S | C480S | HQ267587 | None | None | | K103N | K32R, V35T, E40D, V60I, S68SG, I135V, I142V, S162A, K173T, Q174R, D177E, T200A, Q207A, R211K, F214L, V245Q, E248D, Y271H, T286A, E291D, V292I, I293V, E297A, I309IL, V317A, E328D, G335D, M357R, G359S, K366R, T369V, A371V, I375V, A376V, T386P, A400T, W410Y | CRF02_AG |
| | C482S | C482S | HQ267589 | None | None | | | V35T, E40D, K49R, V60I, K122R, I135V, S162A, K173T, Q174K, D177E, T200A, Q207E, V245T, D250E, S251N, T286A, E291D, V292I, I293V, S322T, G335D, R356K, M357R, G359S, E370A, A371V, I375V, A376S, K390R, K395R, T403M | CRF02_AG |
| | C507S | C507S | HQ267598 | None | None | | | V35T, E40D, K49R, V60I, K122A, S162A, K173T, D177E, T200A, Q207E, V245Q, D250DE, T286A, E291D, V292I, I293V, P294T, S322T, G335D, R356K, M357R, G359S, V365I, T369V, A371V, V372I, I375V, A376S, S379G, K390R, T403M, E432D, V435M | CRF02_AG |
| | C511S | C511S | HQ267601 | None | None | | | V35T, T39A, E40D, K122R, D123E, I135V, S162A, K173T, Q174KR, D177E, I178IM, T200A, Q207E, R211Q, V245Q, E248EDKN, T286A, E291D, V292I, I293V, P294T, S322A, R356K, M357K, G359S, A371V, I375A, K390R, K395R, A400AT, T403M | CRF02_AG |
| | D325T | D325T | HQ267622 | None | None | | | V35T, T39N, E40D, I135A, S162A, K173KT, Q174N, D177E, I178IV, Q207E, R211K, V245Q, K281KR, T286A, E291D, I293V, P294T, I329V, F346Y, M357V, G359S, A376S | CRF02_AG |
| | D326T | D326T | HQ267623 | None | None | | K103N | V35T, E36ED, T39A, E40D, E53D, V90I, S162A, K173I, Q174K, D177E, G196E, T200A, Q207G, R211A, V245M, V276I, Q278E, T286A, V292I, I293V, E297K, S322T, D324E, G335D, R356K, M357K, G359S, T369A, A371V, I375V, A376V, T377TIM, I380V, T386P, K390R, K395R, A400T, T403M, I411M, E432D | CRF02_AG |
| | D339T | D339T | HQ267633 | None | None | | | V35T, E36D, T39A, E40D, K49R, I135L, S162A, K173T, Q174QK, D177E, T200A, Q207E, R211K, V245Q, V276I, K277KR, T286A, E291D, V292I, I293V, I326V, G335D, R356K, M357K, G359S, K366KR, T369V, A371V, I375V, A376T, T377I, K390R, A400T, T403TM, E432D | CRF02_AG |
| | D356T | D356T | HQ267648 | None | None | | E138K | V35T, E36D, T39A, E40D, I135V, S162A, K173T, Q174K, D177E, I178M, T200A, Q207D, V245Q, K275Q, T286A, E291D, V292I, I293V, P294T, L301X, S322T, G335D, R356K, M357K, G359S, A371V, I375V, S379G, K390R, K395R, T403M, E432D, V435I | CRF02_AG |
| | D361T | D361T | HQ267650 | None | None | | V179E | E6D, V21I, K32R, V35T, T39A, E40D, R78S, D123E, K173I, Q174K, D177E, I195L, T200A, Q207E, R211K, V245Q, E248N, D250E, A272G, T286A, E291D, V292I, I293V, P294T, K311R, S322A, G335D, R356K, M357K, G359A, A376V, T386A, K390R, E399D, A400I, T403A | CRF02_AG |
| | D372T | D372T | HQ267658 | None | None | | | V35T, E40D, K49R, I50V, E53ED, V60I, Q174K, D177E, I178IM, T200A, Q207DE, F214FL, V245Q, D250E, K281R, T286A, E291D, V292I, I293V, P294T, G335D, F346Y, R356K, M357K, G359S, K366R, T369V, A371V, I375V, A376V, A400T, T403M, W410C | CRF02_AG |
| El Annaz (2012) | 12481 | 12481.RT | JN185309 | None | None | | | V35T, T39A, E40D, K102Q, K122E, I135T, I142V, S162A, K173T, Q174A, D177E, T200A, Q207DGNS, R211K, F214L, E224D, P225F | CRF02_AG |
| Frange (2012) | 690227KRJ | 690227KRJ | JQ292250 | None | None | | | E36D, T39S, E40D, K49R, K102E, I135V, S162A, K173T, Q174K, D177E, I178M, T200A, E204K, Q207E, V245Q, E248D | CRF02_AG |
| | 440114GYM | 440114GYM | JQ292440 | None | None | | | V21I, V35T, T39N, E40D, V60I, D123E, D177E, T200A, Q207E, R211K, V245E | CRF02_AG |
| Karlsson (2012) | SE_115 | SE_115 | JQ698746 | None | None | | | V35T, E36D, E40D, D121HY, K122KE, I135V, S162A, K173IT, Q174A, D177E, T200A, Q207E, R211K, P243A, V245Q | CRF02_AG |
| | SE_191 | SE_191 | JQ698798 | None | None | | | V35T, E36D, T39I, E40D, K49R, E53D, S162A, K173T, Q174K, D177E, I178L, T200A, E204EK, Q207E, R211T, E224EK, W239WG, I244V, V245E | CRF02_AG |
| Youngpairoj (2012) | cm1567 | cm1567 | DQ166398 | None | None | | | V35T, E36D, E40D, V90I, K104R, K122E, D123G, S162A, K173I, Q174K, D177E, I178M, I180V, T200A, Q207E, V245Q, E248D, V276I, T286A, E291D, V292I, I293V, P294T, S322G, I326V, R356K, M357R, R358K, G359S, T369A, I375V, A400T, T403Q, V435A | CRF02_AG |
| | cm1778 | cm1778 | DQ166409 | None | None | | V179E | K20R, V35T, T39A, E40D, D123N, S162A, K173T, Q174K, D177E, T200A, Q207E, F214L, V245Q, T286A, E291D, V292I, I293V, P294T, E312Q, S322T, I326V, G335D, R356K, M357K, G359S, A371V, I375A, T377I, K390R, A400T, T403M, E432D, V435A | CRF02_AG |
| | cm18bb | cm18bb | DQ166420 | None | None | | | V35T, E36D, T39S, E40D, K49R, V90I, K122E, D123S, S162A, K173T, Q174K, D177E, T200A, Q207E, V245K, E248D, D250E, S251N, K281R, T286A, E291D, V292I, I293V, P294T, E297K, A304E, S322A, G335D, R356K, M357R, G359S, T369A, A371V, I375A, K390R, K395R, T403M, E432D | CRF02_AG |
| Frentz (2013) | EHR-00105 | EHR-00105 | JX299533 | None | None | | | P14AS, V35T, T39A, E40D, S68G, V90I, I135V, S162A, K173AT, Q174K, D177DE, I178IM, V179VI, T200A, Q207E, V245T | CRF02_AG |
| | EHR-13777 | EHR-13777 | JX299767 | None | None | | | V35T, E36D, E40D, D121HY, K122KE, I135V, S162A, K173IT, Q174A, D177E, T200A, Q207E, R211K, P243A, V245Q | CRF02_AG |
| | EHR-22580 | EHR-22580 | JX299930 | None | None | | | V35T, E40D, K49R, S162A, K173A, Q174K, D177E, Q197H, T200A, Q207G, R211S, V245Q | CRF02_AG |
| | EHR-42510 | EHR-42510 | JX300256 | None | None | | | V35T, T39A, E40D, I135V, S162A, K173T, Q174R, D177E, I178M, T200A, Q207E, R211K, F214L, V245Q | CRF02_AG |
| | EHR-46061 | EHR-46061 | JX300307 | None | None | | | T27S, V35T, E40D, V60I, S68SN, D123E, S162AT, K173T, Q174K, D177E, I178L, Q207E, R211K, V245E | CRF02_AG |
| Hawke (2013) | 16256179 | 16256179 | KC237973 | None | None | | | V35T, T39A, E40D, S162A, K173T, Q174KR, D177E, T200A, Q207E, R211K, V245KQ, S251SN | CRF02_AG |
| Tramuto (2013) | CV970_63 | CV970_63 | EF192302 | None | None | | | V35T, E36D, T39TA, E40D, D123DE, E138EA, S162A, K173T, Q174K, D177E, V179VIM, T200A, Q207E, R211K, P243T, V245Q, E291D, V292I, I293V, P294PT, S322T | CRF02_AG |
| | CV1268_21 | CV1268_21 | HQ667676 | None | None | | | V35T, E40D, K49R, V60I, I135K, S162A, K173T, Q174K, D177E, I178V, V179I, Q182QP, G196E, T200A, Q207G, F214FL, V245E, E248D, T286A, E291D, V292I, I293V, P294T, K311R, I326V | CRF02_AG |
| | CV1329_101 | CV1329_101 | HQ667699 | None | None | | | V35T, T39TA, E40D, K49R, K122E, E138A, S162A, E169K, K173T, Q174K, D177E, I178IM, G196E, T200A, Q207D, R211RK, F214FL, V245IL, K281R, T286A, E291D, V292VIM, I293V, P294T, S322T | CRF02_AG |