<!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

Reverse Transcriptase Inhibitors

Subtype CRF01_AE
Gene RT
Mutation L210M
Rx RTI-naive
IncludeMixtures No
References 24
Patients 30
Isolates 30
 
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Sequences matching input query are shown below. Original reference, patient identifier, isolate name, partial treatment histories and accession number are indicated. Complete treatment histories, when available, can be accessed by clicking the isolate name. Sequences may additionally be downloaded in the fasta format, or viewed as individual or composite alignments using the options above. If the user wishes to view individual alignments of isolates for which there are multiple clones, the user can choose to view either an alignment of consensus sequences derived from the clones or an alignment of each clone as well as a consensus sequence.

Author (yr) Patient Isolate Acc# NRTIs NNRTIsNRTIDRMs NNRTIDRMs OtherMutSubtype
Lan (2003)NTHvr131NTHvr131AY238042NoneNone  E6D, K11T, K20R, V35I, T39K, K43E, V111X, K122E, D123S, K173I, Q174K, D177E, I178M, Q207A, L210M, R211S, F214L, K238R, V245ECRF01_AE
Hsu (2005)LYH_AY870223BAA161413AY870223NoneNone  E6D, V35T, T39K, K43E, S68G, K122E, D123S, I135T, K173M, Q174K, D177E, I178L, T200A, Q207A, L210M, R211S, V245E, V276I, T286A, V292I, I293V, E312T, I326V, I329V, G335D, K350R, M357K, G359S, K366R, A371V, A376V, K390R, K395RCRF01_AE
Ly (2005)NL_KHM_CD18KHM_CD18DQ013443NoneNone  K20R, V35T, E36D, T39K, K43E, K122E, D123N, T139S, S162C, K173T, Q174K, D177E, I178M, E194D, Q207N, L210M, R211K, K238R, V245ECRF01_AE
Tee (2005)03MYKL155503_1555AY904655NoneNone  V35T, T39K, K43E, K122E, D123N, K173I, Q174K, D177E, I178M, I202V, Q207A, L210M, R211N, V245ECRF01_AE
 04MYKL173404_1734AY904684NoneNone  T27P, V35T, T39K, K43E, K122E, D123S, I135T, S162C, K173I, Q174K, D177E, T200A, I202V, Q207A, L210M, R211S, K238R, V245ECRF01_AE
Chang (2008)TW5407aTW5407a NoneNone  E6D, K20R, V21I, V35T, T39K, K43E, V60I, K122E, D123S, I135T, K173I, Q174K, D177E, V179I, I202V, Q207A, L210M, R211S, K238R, V245ECRF01_AE
Sirivichayakul (2008)BED-49BED-49RTJQ364383NoneNone  V35T, T39K, K43E, K102E, K122E, D123N, K173I, Q174K, D177E, V179T, I202V, Q207A, L210M, R211S, F214L, D237E, I244D, V245ECRF01_AE
Auwanit (2009)135AE-RT135FJ463587NoneNone  E6D, V35T, T39K, K43E, K122E, D123S, K173I, Q174K, D177E, T200A, Q207A, L210M, R211S, K238KR, V245HKNQCRF01_AE
 153AE-RT153FJ463590NoneNone  E6D, V35T, T39K, K43E, V60I, K122E, D123S, I135T, I142IV, K173I, Q174K, D177E, I178M, Q207A, L210M, R211S, V245ECRF01_AE
 162AE-RT162FJ463595NoneNone  E6D, K11T, V35T, T39K, K43E, V106I, K122E, D123S, S162C, K173T, Q174K, T200A, Q207ADNT, L210M, R211RKNS, K238R, V245E, K249RCRF01_AE
Ishizaki (2009)A2_441A2_441FJ007099NoneNone  E6D, V35T, T39N, K122E, D123S, I135T, I142V, S162C, K173I, Q174K, D177E, Q207N, L210M, R211S, K238R, V245ECRF01_AE
Nouhin (2009)KC21KC21RTFJ531893NoneNone  E40D, V111I, K122E, D123N, K166R, K173IT, Q174K, N175H, I178L, V179I, Q207A, L210M, R211N, K238RCRF01_AE
Tu (2009)49plasma49EU518339NoneNone  E6D, K11T, V35T, T39K, K43E, E89EK, S105SP, K122E, D123S, I135T, S162C, K173I, Q174K, D177E, I178M, Q207A, L210M, R211S, Q222QH, K238RCRF01_AE
Vercauteren (2009)pt19701448749787GQ399054NoneNone  E6D, K11A, V35T, T39K, K43Q, V60I, K122E, D123S, I142IV, A158AS, K166R, K173I, Q174K, D177E, Q207A, L210M, R211S, K238R, V245E, A272P, V292VI, I293V, P294AITV, K311KR, E312ADNT, I326V, I329VCRF01_AE
Han (2010)LN206LN206FJ531471NoneNone  E6D, K11T, V35T, T39K, K43E, K122E, D123S, S162C, K173S, Q174K, D177E, I178M, Q207A, L210M, R211S, K238R, V245ECRF01_AE
Phan (2010)ND08ND08AB519453NoneNone  E6D, K11T, K32E, V35T, T39K, K122E, D123S, I135K, S162C, K173I, Q174K, D177E, Q207S, L210M, R211SCRF01_AE
Selimova (2010)42MOS42MOSHM345571NoneNoneA62V K11T, V35I, E36D, T39S, K49R, K122E, D123S, A158S, K166R, E169A, K173S, Q174K, I178M, Q207A, L210M, R211K, V245M, E248D, A272P, V276VI, K277KR, T286A, E291D, V292I, I293V, P294T, E297EKCRF01_AE
Bontell (2011)Pat03508.VL786UsHQ852881NoneNone  E6D, K11T, V35T, T39K, K43Q, H96E, A98T, K122E, D123S, I135IT, S162C, K173T, Q174K, D177E, I178M, T200TA, Q207N, L210M, R211SCRF01_AE
Lazaro (2011)DN-M12DN-M12HQ542755NoneNone  I5IN, E6NY, V35I, K122E, D123S, S162C, E169ED, K173IMRT, Q174K, D177E, G196E, E203ED, Q207A, L210M, R211S, K238R, V245ECRF01_AE
 DT-M1DT-M1HQ542784NoneNone  K30KE, V35T, T39K, K43E, K102Q, K122E, D123NS, S162C, F171Y, K173AGRT, Q174K, D177E, I178M, T200TI, Q207A, L210M, R211S, K238RCRF01_AE
Zeng (2011)K13K13JF505554NoneNone  E6D, K11T, V35T, T39K, K43E, K64R, D121H, K122E, D123S, S162C, K173S, Q174K, D177E, I178M, Q207A, L210M, R211S, K238RCRF01_AE
 K64K64JF505555NoneNone  E6D, K11T, V35T, T39K, K43E, K64R, K122E, D123S, S162C, K173S, Q174K, D177E, I178M, Q207A, L210M, R211S, K238RCRF01_AE
Chen (2012)YN10DH0080YN10DH0080JQ658701NoneNone  E6D, K11T, V35T, T39K, K43E, S68G, K122E, D123S, S162C, K173I, Q174K, D177E, Q207A, L210M, R211S, K238R, V245E, K249KR, A272P, E291D, V292I, I293VCRF01_AE
Chow (2012)10MYKJ06710MYKJ067JX390612NoneNone  E6D, P9S, V35T, K122E, D123S, S162C, K173R, Q174K, D177E, Q207A, L210M, R211N, V245E, T286A, E291D, V292I, I293V, E312T, I329V, G335D, M357K, G359S, K366R, A371V, K390R, A400T, T403M, E432D, N447S, R448K, L452LS, D471E, Q480H, L491S, K512R, L517V, S519N, Q524E, E529D, A534S, I556V, K558KRCRF01_AE
Kijak (2012)05TH74145205TH741452JN248355NoneNoneN348IY181CK11T, V35T, T39K, K43E, K122E, D123S, K173I, Q174K, D177E, I178M, T200E, Q207A, L210M, R211K, D218E, K238R, V245Q, A272P, T286A, E291D, I293V, E312T, I326V, I329V, G335D, P345Q, M357R, G359S, K366R, A371V, K390R, K395R, A400T, T403M, E432D, L452Q, D471E, Q480H, H483Y, L491S, K512R, L517V, S519N, Q524E, K530R, A534S, A554SCRF01_AE
Rolland (2012)AA036a05LAA036a05LJX447114NoneNone  E6D, K11T, V35T, T39K, K43E, K64R, K122E, D123S, T165I, K173I, Q174K, D177E, I178M, T200A, Q207A, L210M, R211S, K238R, V245E, T286A, I293V, E312T, I326V, I329V, G335D, M357K, G359S, K366R, T369A, A371V, T377S, S379G, K390R, K395R, A400T, T403M, E432D, N447S, D471E, Q480H, H483Y, L491S, A502T, K512R, L517V, S519N, Q524E, A534S, A554SCRF01_AE
Telan (2012)1105274811052748AB747453NoneNone  E6D, V35I, E36A, T39K, K43E, V111I, K122E, D123S, S162C, K173I, Q174K, D177E, I178M, V179I, T200A, Q207A, L210M, R211S, K238R, V245ECRF01_AE
Yang (2012)GZ107GZ107JN848847NoneNone  I2V, E6D, K11T, K20R, V35T, T39K, K43E, V60I, S68G, V106I, K122E, D123N, T139A, I167IV, K173IT, Q174K, D177E, I178L, T200R, Q207A, L210M, R211S, K238R, V245E, T286A, E291D, V292I, I293VCRF01_AE
 GZ106GZ106JN848892NoneNone  I2V, E6D, K11T, K20R, V35T, T39K, K43E, V60I, S68G, V106I, K122E, D123N, T139A, K173I, Q174K, D177E, I178L, T200R, Q207A, L210M, R211S, K238R, V245E, T286A, E291D, V292I, I293VCRF01_AE
Li (2013)28692869JQ901075NoneNone  E6D, K11T, V35T, T39K, K43E, V118I, K122E, D123S, I135T, K173I, Q174K, D177E, T200R, Q207A, L210M, R211S, F214L, K238R, V245D, V276I, T286A, E291D, V292I, I293V, E312T, I326V, I329V, G335D, P345Q, F346Y, M357K, G359S, K366R, A371V, K390R, K395R, A400T, E432D, N447S, R448K, D460N, D471E, Q480H, H483Y, L491P, K512R, L517I, S519N, Q524E, I526V, A534S, A554SCRF01_AE

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