Reverse Transcriptase Inhibitors

HOME Genotype-Rx Genotype-Pheno Genotype-Clinical hivdb program

Reverse Transcriptase Inhibitors

Subtype	C
Gene	RT
Mutation	E40D
Rx	RTI-naive
IncludeMixtures	No

References	112
Patients	485
Isolates	488

Sequences matching input query are shown below. Original reference, patient identifier, isolate name, partial treatment histories and accession number are indicated. Complete treatment histories, when available, can be accessed by clicking the isolate name. Sequences may additionally be downloaded in the fasta format, or viewed as individual or composite alignments using the options above. If the user wishes to view individual alignments of isolates for which there are multiple clones, the user can choose to view either an alignment of consensus sequences derived from the clones or an alignment of each clone as well as a consensus sequence.

Author (yr)	Patient	Isolate	Acc#	NRTIs	NNRTIs	NRTIDRMs	NNRTIDRMs	OtherMut	Subtype
Koch (2001)	NK-9	NK-9	AY007756	None	None			V35T, E36A, T39E, E40D, K49KR, K122E, D123S, A158S, K173T, D177E, T200E, I202V, Q207K	C
	NK-15	NK-15	AY007763	None	None			V35T, E36A, T39E, E40D, K49R, K122E, D123S, I159V, K173A, T200A, Q207E	C
van Harmelen (2001)	JH_Du179	JH_Du179	AY043174	None	None			K32R, V35T, E36A, T39E, E40D, S48T, V60I, K122E, K173A, D177E, T200A, Q207E, R211K, V245N, E248D, A272P, K275Q, K277R, T286A, E291D, V292I, I293V, D324E, Q334D, G335D, R356K, M357R, G359T, A376S, T377L, S379C, K390R, A400I, E404D, E432D, V435L, V458I, T470R, D471E, H483Q, L491S, S519N, Q524E, K530R, A534S, A554S	C
Dowling (2002)	MSA4077	MSA4077	AF457085	None	None			K11T, V35T, E36A, T39E, E40D, S48T, K49R, K122E, D123G, Q145C, K173A, D177E, T200A, Q207E, V245Q, A272P, K277R, T286A, E291D, V292I, I293V, S322L, G335D, F346H, R356K, G359T, T377Q, K390R, A400T, E404D, V435A, A437V, L452M, R461K, S468A, D471E, H483K, L491S, S519N, A534S, A554N	C
Hierholzer (2002)	SU009	SU009	AY102489	None	None			V35T, E36A, T39E, E40D, K122E, D123G, K173A, Q174K, D177E, T200E, Q207E, R211K, V245Q	C
	SU231	SU231	AY102498	None	None			V35T, E36A, T39E, E40D, A98S, K104R, K122E, D123S, I135V, K166R, K173A, D177E, T200A, Q207E, V245Q	C
	SU504	SU504	AY102486	None	None			V35T, E36A, T39E, E40D, K122E, D123S, I135T, A158AS, K173A, Q174K, D177E, T200A, Q207E, R211K, F214L, V245Q, K249Q	C
Novitsky (2002)	00BW3842	00BW3842	AF443109	None	None			V35T, T39E, E40D, K43R, K122E, K173A, Q174K, T200A, Q207A, R211K, V245K, D250E, A272P, E291D, V292I, K311R, I326V, Q334H, G335D, R356K, G359T, I375X, T377M, S379C, K390R, A400T, E404D, E413D, P420L, V435I, E449D, L452I, D471E, H483Q, L491S, S519N, K530R, A534S, A554S	C
	00BW1795	00BW1795	AF443097	None	None			V35T, E36A, T39E, E40D, S48T, V118I, K122E, D123G, E138A, K166R, K173T, D177E, T200A, E204K, Q207E, R211K, F214L, A272P, K277T, T286A, E291D, V292I, I293V, E297D, Q334H, G335D, R356K, M357R, G359T, T377L, T386I, K390R, A400T, E404D, I434V, V435A, A437V, L452M, V466I, V467I, D471E, T477A, Q480H, H483Q, L491P, K527N, K530R, A534S, A554S	C
Pillay (2002)	00ZA_AC3	00ZA_AC3	AF468459	None	None			V35T, E36A, T39E, E40D, S48T, K122E, D123N, K173A, D177E, T200A, Q207E, V245Q, A272P, K277R, T286A, E291D, V292I, I293V	C
	00ZA_AC31	00ZA_AC31	AF468482	None	None			V35T, E36A, T39E, E40D, S48T, K122E, R125X, K173A, D177E, T200A, Q207E, V245Q, D250N, A272P, K277R, L279I, T286A, E291D, V292I, I293V, K311R	C
	00ZA_AC44	00ZA_AC44	AF468487	None	None			V35T, T39K, E40D, S48T, K122E, D123G, S162C, K173A, Q174K, D177E, T200A, Q207E, V245Q, A272N, K277R, T286A, E291D, V292I, I293V	C
	00ZA_AC49	00ZA_AC49	AF468492	None	None			V35T, E36A, T39E, E40D, S48T, V60I, K122E, D123G, K173A, D177E, V179I, T200A, Q207E, D218E, V245K, A272P, T286A, E291D, V292I, I293V	C
Snoeck (2002)	BE12	BE12	AF339000	None	None			V35T, T39E, E40D, K43R, S48T, K49R, K122E, D123G, A158S, K173V, D177E, T200A, Q207E, V245Q, A272P, K277R, T286A, E291D, V292I, I293V	C
Gordon (2003)	ZA077p02	ZA077p02	AY137001	None	None			V35T, E36A, T39E, E40D, S48T, V60I, K122E, D123S, T165A, K173A, Q174K, D177E, G196E, T200A, Q207G, R211K, V245Q, A272P, K277R, T286A, E291D, V292I, I293V	C
	ZA033p01	ZA033p01	AY136986	None	None			V8I, V35T, E36A, T39E, E40D, S48T, V60I, K64R, K122E, D123S, S162C, K166R, K173A, D177E, T200A, Q207E, R211K, V245Q, K277R, T286A, E291D, V292I, I293V	C
	ZA019p01	ZA019p01	AY136972	None	None			V35T, E36A, T39E, E40D, S48T, K122E, D123N, I135R, K173A, D177E, Q207E, L210F, R211K, V245Q, T253S, A272P, K277R, T286A, E291D, V292I, I293V	C
Harris (2003)	99ET1	99ET1	AY255823	None	None			V8I, V35T, E36A, T39E, E40D, K43R, K122E, D123N, I135T, K173A, D177E, T200A, I202V, Q207G, P243T, V245Q, A272P, K277R, T286A, E291D, V292I, I293V, P294A, Q334H, G335D, R356K, M357R, G359T, T377M, K390R, A400T, E404D, L452I, R461K, T470N, D471E, H483Q, L491S, E514D, L517I, S519N, K530R, A534S, A554K	C
Huang (2003)	UG268	UG268	AF447844	None	None			V35T, E36A, T39E, E40D, K49R, A98AS, D123E, T139A, A158S, K173T, D177E, T200A, Q207E, R211RK, V245Q, A272P, E291D, V292I, I293V, P294T	C
Hunt (2003)	98ZA528	98ZA528	AY158535	None	None			V35T, E36A, T39E, E40D, S48T, K122E, D123S, K173A, D177G, T200A, Q207E, R211K, V245Q, K277R, T286A, E291D, V292I, P294S, Q334H, G335D, R356K, G359T, T377M, K390R, A400T, E404D, V435A, A437V, V466I, S468T, D471E, T477S, H483Q, L491S, S519N, K530R, A534S, A554S	C
Jorgensen (2003)	JLB_Pat40	HIM419466	AJ419466	None	None			K20R, V35T, E36A, T39E, E40D, E42ED, K49R, K122KE, D123DN, A158S, T165TI, K166KR, K173A, D177E, T200A, Q207E, V245Q, K249Q, A272P, K277R, T286A, E291D, V292I, I293V, I309IV	C
	JLB_Pat45	HIM419471	AJ419471	None	None			V35T, E36A, T39E, E40D, S48T, K173T, T200A, Q207E, R211K, V245Q, A272P, K277R, T286TA, E291D, V292I, I293V, P294PT, K311R, H315X	C
Maljkovic (2003)	MI_Pat51	00SE18651	AY165225	None	None			V35T, E36A, T39E, E40D, K43KR, K104R, K122E, I135T, K173T, D177E, I195IT, T200A, I202IV, E204K, Q207E, V245Q, A272P, K277R, T286A, I293V, P294A	C
	MI_Pat91	01SE21634	AY165260	None	None			T7I, V35T, E36A, T39E, E40D, K49R, K122E, D123S, A158S, I159V, K173A, D177E, T200A, Q207E, R211K, V245Q, A272P, K277R, T286A, E291D, V292I, I293V	C
Papathanasopoulos (2003)	01ZATM45	01ZATM45	AY228557	None	None			V35T, E36A, T39E, E40D, S48T, K122E, D123N, K173T, Q174K, T200A, I202V, Q207E, R211K, V245Q, D250E, S251D, A272P, G273R, K275R, V276I, L283I, T286A, E291D, V292I, I293V, E328D, G335D, R356K, M357L, G359S, T377L, T386I, K390R, E399G, E404D, V435I, L452I, R461K, V466I, D471E, H483Q, L491S, K512R, S519N, K530R, A534S, A554S	C
Pollakis (2003)	14	AA88055GP	AY242579	None	None			V35T, E36A, T39E, E40D, K43R, K122E, D123S, A158S, K173A, D177E, T200A, Q207E, V245L, A272P, K277R, K281R, T286A, E291D, V292I, I293V	C
		AA88055GP	AH012547	None	None			V35T, E36A, T39E, E40D, K43R, K122E, D123S, A158S, K173A, D177E, T200A, Q207E, V245L, A272P, K277R, K281R, T286A, E291D, V292I, I293V	C
	11	DE96043GP	AY242584	None	None			K20R, V35T, E36A, T39E, E40D, P52T, K64N, K65T, K73T, P97T, D121H, K122E	C
	4	DE96054GP	AY242597	None	None			K11T, V35T, T39N, E40D, K122E, D123S, I142V, A158S, S162N, K166R, K173A, D177E, I178M, T200A, Q207E, V245Q, A272P, V276I, K277R, T286A, E291D, V292I, P294A	C
		DE96054GP	AH012553	None	None			K11T, V35T, T39N, E40D, K122E, D123S, I142V, A158S, S162N, K166R, K173A, D177E, I178M, T200A, Q207E, V245Q, A272P, V276I, K277R, T286A, E291D, V292I, P294A	C
Shafer (2003)	A384_0246	0246a	EF548204	None	None			T39E, E40D, D121HY, K122E, D123G, K173A, Q174K, D177E, T200A, V245Q	C
Willliamson (2003)	CW-GG5	GG5	AF543983	None	None			V35T, E36A, T39E, E40D, S48T, K122E, D123N, K173A, D177G, T200A, Q207E, R211K, V245Q, E248D, K277R, T286A, E291D	C
Arroyo (2004)	01TZA207	01TZA207	AY253307	None	None			V35T, E36A, T39E, E40D, S48T, K122E, D123S, I135T, K173A, Q174K, D177E, T200A, Q207E, V245Q, K281R, T286A, E291D, V292I, I293V, E297K, V317A, Q334H, G335D, R356K, G359T, A371V, T377M, T386I, K390R, A400T, E404D, V435P, E449D, L452I, V458I, V466I, S468P, D471E, H483Q, L491S, K530R, A534S, A554S	C
	01TZA247	01TZA247	AY253309	None	None			V8I, V35T, E36A, T39E, E40D, S48T, K122E, D123N, I142V, K173T, D177Q, I178L, T200A, Q207E, V245M, A272P, K277R, T286A, E291D, V292I, I293V, Q334N, G335D, R356K, G359T, A360V, T377M, K390R, E396D, A400T, E404D, L452I, T470N, D471E, T477A, H483Q, G490K, L491S, S519N, K527N, K530R, A534S, A554S	C
Deshpande (2004)	in106	in106	AY526059	None	None			K30KE, V35T, E36A, T39D, E40D, S48T, K49R, V60I, D121Y, K122E, A158S, S162A, K166R, K173A, D177E, T200A, K201KR, Q207E, V245K	C
	in8	in8	AY525959	None	None			K30E, V35T, E36A, T39E, E40D, S48T, V60I, D121Y, K122E, I135T, S162A, K173T, D177E, T200A, Q207E, R211K	C
	in22	in22	AY525971	None	None			V8D, V35T, E36A, T39E, E40D, S48T, V60I, D76DN, D121Y, K122E, I135T, S162A, K173T, D177E, T200A, Q207E, R211K	C
	in3	AD_in3rt	AY525955	None	None			V35T, E36A, T39D, E40D, S48T, V60I, D121Y, K122E, I135T, S162A, K173T, D177E, T200A, Q207E, R211K, V245H	C
Eshleman (2004)	SE73	SE73p	AY435389	None	None			V35T, E36A, T39E, E40D, K43R, S48E, E53D, K101Q, K122E, D123DG, E138A, S162HY, K173A, D177G, V179I, G196E, T200A, Q207DN, V245Q, A272P, K277R, T286A, E291D, V292I, K311R, Q334E	C
Gulick (2004)	RG24	RG24w0		None	None			T39E, E40D, S48T, K122E, D123NS, K173T, T200A, L205LF, Q207E, R211RK, V245Q	C
Servais (2004)	SJ_Pat6	SJKLM014	AJ412994	None	None			I37X, T39E, E40D, K122E, D123N, A158S, S162G, K173A, Q174R, D177E, T200A, Q207E, R211K, V245E	C
	SJ_Pat36	SJKLM028	AJ413007	None	None			I37X, T39E, E40D, K49R, K122E, D123G, A158S, D177E, T200A, Q207E, R211K, V245Q	C
Snoeck (2004)	BE64	BE64	AY901497	None	None			V35T, E36A, T39DE, E40D, K122E, D123N, D177E, I178L, T200E, Q207G, I244IV, V245Q, K281R, E291D, I293V, P294T	C
Yang (2004)	98KE384	98KE384	AY492764	None	None			V35T, E36A, T39E, E40D, S48T, K122E, D123S, K173A, D177E, T200A, Q207E, V245Q, A272P	C
Balakrishnan (2005)	YRG7	YRG7	AY787493	None	None			V35T, E36A, T39E, E40D, S48T, V60I, I135V, S162C, K173T, T200A, Q207E	C
Bellocchi (2005)	148	MC148	GU199561	None	None			V35T, E36A, T39E, E40D, S48ST, E53D, K122KE, D123N, K173A, Q174K, G196T, T200A, Q207E, R211K, V245I, A272P, K277R, L283LI, E291D, V292I, I293V	C
	141	MC141	GU199574	None	None			V35T, T39E, E40D, S48T, W88C, K122E, D123N, I135T, K166KR, K173T, Q174K, T200A, Q207E, R211K, F214L, V245X, E248EDKN, D250DE, A272P, K275R, K277KR, Q278H, T286A, E291D, V292I, I293V, L301I, K311KR	C
	388	MT000388	GU199578	None	None			V21I, V35T, E36A, T39E, E40D, S48T, K122E, D123N, E169D, K173A, D177E, I178IM, T200A, Q207N, R211K, V245Q, E248D, A272S, E291D, V292I, I293V	C
	779	MT000779	GU199581	None	None			V8I, V35T, T39A, E40D, S48T, K122AE, K173AT, D177E, T200A, Q207E, R211RK, V245Q, A272P, K275Q, V276T, Q278K, T286A, E291D, V292VI, I293V, K311R	C
Bessong (2005)	01PB18ZA	01PB18ZA	AY510052	None	None			V35T, E36A, T39E, E40D, S48T, V60I, K102Q, V118I, K122E, I135T, E138A, K173A, Q174N, D177E, T200A, Q207E, V245Q, A272P, K277R, T286A, E291D, V292I, I293V	C
	01PB1ZA	01PB1ZA	AY510044	None	None		Y318F	V35T, E36A, T39E, E40D, S48T, V60I, K102Q, V118I, K122E, I135T, E138A, K173I, Q174K, T200A, Q207E, L210V, F214L, V245Q, E248D, S251C, A272P, K275R, K277R, Q278H, T286A, E291D, V292I, I293V	C
	01PB2ZA	01PB2ZA	AY510045	None	None			K20R, V35T, T39E, E40D, S48T, V60I, K122E, D123K, I135T, K173V, Q174K, D177E, T200A, Q207E, V245Q, A272P, K277T, K281R, T286A, E291D, V292I, I293V	C
Bussmann (2005)	01BW3374N	01BW3374N	AY829316	None	None			V35T, E36A, T39E, E40D, S48T, K173A, D177E, G196R, T200A, Q207E, R211K, V245E, D250E, A272P, T286A, E291D	C
	01BW392S	01BW392S	AY829278	None	None			V35T, E36A, T39E, E40D, S48T, K122E, D123S, K173A, Q174K, D177E, L193F, G196E, T200A, Q207E, D250E, K277R, T286A, E291D, V292I, I293V	C
	01BW3920N	01BW3920N	AY829326	None	None			V35T, E36A, T39E, E40D, S48T, K122E, D123S, I135V, S162C, K173A, D177E, Q207E, R211K, V245Q, D250E, S251D, A272P, K277R, T286A, E291D, V292I, I293V, V317A	C
	01BW375S	01BW375S	AY829274	None	None			V35T, E36A, T39E, E40D, S48T, K122E, D123N, K173T, Q174K, T200A, Q207K, R211K, F214L, V245Q, E248D, D250E, S251D, E291D, V292I, I293V	C
	01BW2414S	01BW2414S	AY829290	None	None			P4S, V35T, E36A, T39E, E40D, S48T, D121Y, K122E, I142T, K173A, Q174K, D177E, I178L, I202V, Q207K, V245K, D250E, A272K, K277R, T286A, E291D, V292I, I293V	C
Carr (2005)	01NGPL364	01NGPL364	DQ013271	None	None			V35T, E36A, C38Y, T39E, E40D, S48T, D121H, K122E, A158S, K173I, D177E, Q197K, T200A, Q207D, R211K, K238R, P243S, V245Q, E248D	C
Ciccozzi (2005)	MC_AY611649	C27	AY611649	None	None			V35T, E40D, S48T, V60I, K122E, D123S, I135R, S162H, K173A, D177E, T200A, Q207E, V245Q, A272P, K277R, T286A, E291D, V292I, I293V	C
Grossman (2005)	17747	17747RT116		None	None			T39E, E40D, K122E, D123DG, A158S, K173A, D177E, Q207E, V245Q	C
	20658	20658RT218		None	None			T39E, E40D, D121DH, K122E, S134SG, E138A, A158S, S162SC, K166KR, K173A, T200A, R206RI, Q207G, V245Q	C
	21572	21572RT317		None	None			T39E, E40D, K122E, D123G, V148VG, A158S, K173A, D177E, Q207E, V245Q	C
	24554	24554RT355		None	None			E40D, K49KR, K64KR, K122E, D123S, A158S, K173A, Q174QK, D177E, T200A, Q207E, F214FL, V245Q	C
	26713	26713RT422		None	None			T39E, E40D, S48T, K49R, F116FI, K122E, A158S, F171Y, K173T, Q174K, D177E, T200A, Q207E, V245Q	C
	27523	27523RT452		None	None			T39E, E40D, K102Q, K122E, D123S, I135V, S162SC, K173A, D177E, G196R, T200A, Q207AE, V245Q	C
	28733	28733RT486		None	None			T39E, E40D, D121H, K122E, I135V, K173A, Q174QK, D177E, I178IV, Q207E, R211K, V245Q	C
	28797	28797RT691		None	None			T39E, E40D, N54NY, V90VI, K122E, D123S, T131TI, K173T, D177E, I178M, Q197QK, T200E, Q207E, E224ED, V245Q	C
K'Aluoch (2005)	OK_TC023004	TC023004	DQ079829	None	None			V8I, V35T, E36A, T39E, E40D, S48T, K122E, D123G, K173I, Q174K, D177E, T200A, Q207E, V245Q, A272P, K277T, T286A, E291D, V292I, I293V, S322A	C
Non-B Workgroup (2005)	UK953	UK953	AY901325	None	None			V8I, K32R, V35T, E36A, T39E, E40D, S48T, V90I, K122E, D123S, I135V, A158S, K173A, D177E, I180V, T200A, Q207K	C
	UK2048	UK2048	AY901382	None	None			V8VI, V35T, E36A, T39E, E40D, S48T, V60VI, K122E, D123S, I135IV, K173A, Q174K, T200A, I202IV, E203ED, Q207N, R211K	C
Petch (2005)	LP21	MAL-21RT	AY860486	None	None			T39E, E40D, S48T, K122E, D123G, L149LF, K166KR, K173A, D177E, D192N, T200A, I202IV, Q207E, R211K, V245Q	C
	LP06	MAL-06RT	AY860479	None	None			T39E, E40D, S48T, E53D, K122KE, D123DN, S162F, K166KR, K173A, D177E, T200S, Q207E, R211K, L228LQ, V245Q	C
	LP08	MAL-08RT	AY860481	None	None			T39E, E40D, S48T, K101KR, K122AV, D123DGNS, K173T, D177E, T200A, Q207E, R211K, V245K	C
	LP14	MAL-14RT	AY860494	None	None			T39E, E40D, S48T, E53D, V60VI, K122E, I135IT, S162Y, K166R, K173IT, Q174KR, D177E, T200A, Q207E, R211K, V245Q	C
Saad (2005)	SM_02YE511	02YE511	AY795906	None	None			K20R, V35T, T39E, E40D, S48T, D123E, K173A, D177E, G196K, T200A, I202V, Q207E, R211K, V245Q, E248D, A272P, K277R, T286A, E291D, V292I, I293V, Q334Y, G335D, R356K, M357I, G359T, T377M, T386I, K390R, A400T, E404D, I434M, A437V, L452M, V466I, T470N, D471E, T477A, L491S, S519N, A534S, A554S	C
Bessong (2006)	POB_01PB36ZA	01PB36ZA	DQ222295	None	None			V35T, E36A, T39E, E40D, K122E, D123S, S162Y, K166R, K173T, D177E, T200A, R211Q, V245Q, E248D, D250E, A272P, K275Q, E291D, V292I, I293V	C
	POB_02TS22ZA	02TS22ZA	DQ222307	None	None			V35T, E36A, T39E, E40D, S48T, K122E, S162C, K173A, D177E, I178L, G196K, T200A, Q207A, R211K, V245Q, A272P, K277R, T286A, E291D, V292I, I293V	C
	POB_02TS3ZA	02TS3ZA	DQ222301	None	None			V35T, E36A, T39E, E40D, S48T, K122E, D123S, S162C, K173V, D177E, I178L, G196K, T200A, Q207A, R211K, V245Q, A272P, K277R, T286A, E291D, V292I, I293V	C
Jayaraman (2006)	2-00-0491	2-00-0491		None	None			K20R, V35T, E36A, T39E, E40D, S48T, K122E, D123N, K173A, Q174K, T200A, Q207E, R211K, V245Q, E248D, D250E, S251C	C
	2-00-0622	2-00-0622		None	None			K11A, V35T, E40D, V60I, D121H, K122E, D123S, S162C, K166R, K173A, D177E, T200A, R211K, V245Q	C
	3-00-0122	3-00-0122		None	None			V35T, E36A, T39E, E40D, V118I, K122E, D123S, E138A, I142V, K173T, Q174K, T200A, Q207E, F214L, V245Q, E248EKQ, W252W*	C
Marechal (2006)	JF_065	JF_065	DQ443578	None	None			V35T, E36A, T39E, E40D, S48T, K102KR, K122E, K173T, D177E, I178M, T200A, Q207E, V245Q	C
Parreira (2006)	PG17	PG17	AM071439	None	None			E6D, V35T, E36A, T39E, E40D, S48T, K173A, D177E, V179I, T200A, I202V, R211G, V245Q	C
	PG67	PG67	AM071444	None	None			V35T, E36A, T39E, E40D, S48T, V60I, T69A, K122E, D123S, S134C, I142V, K173A, Q174K, D177E, T200A, Q207K, R211Q, E224G, V245Q	C
	PG175	PG175	AM071454	None	None			P4T, E6A, V35T, E36A, T39E, E40D, S48T, K122E, K173A, Q174K, D177E, G196R, T200A, I202V, R211K, V245K, E248D	C
Razafindratsimandresy (2006)	RR_MAD-GP074	MAD-GP074	DQ345042	None	None			V35T, T39E, E40D, K122E, D123S, I135R, S162C, K173AT, D177DE, T200A, Q207N, R211K, V245Q	C
Rodrigues (2006)	BR04RS125	BR04RS125	DQ070708	None	None			V35T, E36A, T39E, E40D, K43R, S48T, K122E, D123N, A158S, K173R, Q174H, D177E, T200A, Q207E, R211T	C
	BR04RS149	BR04RS149	DQ070674	None	None			V35T, E36A, T39E, E40D, K43R, S48T, V60I, D121Y, K122E, I135T, S162N, I180V, R211K, F214L	C
	BR04RS197	BR04RS197	DQ070703	None	None			V35I, T39D, E40D, S48T, K102R, K122E, I135M, K173A, D177E, T200A, E204K, Q207A, R211K	C
Rousseau (2006)	Pt5	02PS008MB1	DQ275647	None	None			V35T, E36A, T39E, E40D, S48T, V60I, K103R, K122E, D123G, K173T, D177E, T200A, Q207E, V245K, A272K, K277R, T286A, E291D, V292I, I293V, D324E, G335D, R356K, M357R, R358K, G359A, T377L, W383R, K390R, A400T, E404D, I434M, V435A, A437V, N447S, L452I, S468T, L469I, T470S, D471E, H483Q, L491S, S519N, Q524E, K530R, A534S, A554S	C
	Pt29	03PS052MB1	DQ369987	None	None			V35T, E36A, T39E, E40D, S48T, K66R, D121E, K122E, I135V, K173A, D177E, T200A, Q207E, R211K, V245Q, A272S, K277R, L283I, T286V, E291D, V292I, I293V, I329L, Q334Y, G335D, Y339D, R356K, G359T, K390R, A400T, V435A, G436E, L452I, V466I, V467I, S468T, D471E, H483Q, L491S, S519N, K530R, V531I, V548I, A554S	C
	Pt65	03PS123MB1	DQ396369	None	None			E6T, T7P, V35T, E36A, T39E, E40D, S48T, V60I, K122E, D123S, K173A, Q174K, D177E, T200A, Q207E, F214L, V245Q, A272S, K277R, T286A, E291D, V292I, I293V, Q334D, R356K, G359S, T377L, A400T, E404D, P421L, Q428H, V435A, V466I, T470S, D471E, H483Q, L491S, S515P, K530R, A534S, A554S, V559I	C
	Pt77	03PS152MB1	DQ396399	None	None			V21I, V35T, E36A, T39E, E40D, V60I, W88C, K102R, V118I, K122E, D123G, I142T, K166R, K173A, Q174K, D177E, T200A, Q207E, R211K, F214L, V245Q, A272S, K277R, T286A, E291D, V292I, I293V, R356K, G359T, A360T, T369A, T377L, K390R, A400I, E404D, N418S, V435A, E449K, L452M, K465E, V466I, S468P, D471E, L491S, I506L, S519N, K530R, A534S, A554K	C
	Pt90	03SK033B2	AY772692	None	None			V35T, E36A, T39E, E40D, V60I, R72G, D121Y, K122E, S162A, K173A, Q174K, D177E, G196E, T200A, Q207E, R211K, V245Q, D250E, A272P, E291D, V292I, I293V, Q334D, G335D, R356K, M357R, G359T, T377L, K390R, E399D, A400I, E404D, V435A, L452I, V466I, D471E, H483Q, L491S, L517V, S519N, K527N, K530R, A554S	C
	Pt125	03SK113B1	DQ351237	None	None			P4S, E6D, V35T, E36A, T39E, E40D, K122E, D123S, S134G, A158S, K173T, T200A, Q207E, R211K, V245L, A272P, K277R, T286A, E291D, V292I, I293V, V317A, Q334R, G335D, R356K, M357L, G359T, T377L, K390R, A400T, E404D, V435A, R461K, D471E, T477A, H483Q, S519N, K527N, K530R, V531I, A534S, A554S, K558R	C
	Pt138	04PS157MB1	DQ351232	None	None			V35T, E36A, T39E, E40D, S48T, E53D, V60I, K122E, D123S, K173A, Q174K, D177E, T200A, Q207E, R211K, V245Q, A272P, K277R, T286A, E291D, V292I, I293V, R307K, K311R, Q334H, G335D, F346H, G359T, V365I, T377M, K390R, A400T, E404D, V435A, L452I, R461K, V466I, V467I, D471E, H483Q, L491S, S519N, Q524E, K530R, A534S, A554R	C
	Pt195	04SK164B1	DQ056405	None	None			T27S, V35T, T39Q, E40D, S48T, K122E, D123S, K173A, Q197L, T200E, E204Q, Q207D, R211K, D218G, V245Q, E248T, A272P, K277R, E291D, V292I, I293V, Q334H, G335D, R356K, G359T, T377L, K385R, K390R, A400T, E404D, E432D, I434M, V435I, A437V, V467I, D471E, H483L, L491S, S519N, K527N, A534S, A554T	C
	Pt198	04SK168B1	AY878058	None	None			V35T, E36A, T39E, E40D, S48T, K122E, D123G, K173A, Q174K, D177E, I195X, T200A, Q207E, R211K, V245Q, A272P, K277R, T286A, E291D, V292I, I293V, V317A, S322A, K331R, Q334Y, G335D, R356K, G359T, T377M, K390R, A400T, E404D, V435A, L452I, V466I, S468T, T470S, D471E, H483Q, L491S, S519N, K530R, A534S, A554S	C
	Pt209	04SK181B1	AY878062	None	None			V35T, T39E, E40D, K122E, D123G, K166R, K173A, D177E, G196E, T200A, I202V, E204K, Q207D, R211K, V245Q, E248T, D250E, A272P, E291D, V292I, I293V, P313T, V317A, Q334H, G335D, R356K, G359T, T377M, K390R, A400T, E404D, I434T, A437V, L452V, V467I, S468T, L469I, D471E, H483Q, L491S, Q509R, S519N, K530R, A534S, A554S	C
	Pt221	04SK206B1	DQ056415	None	None		K103N	V35T, E36A, T39E, E40D, S48T, V60I, K122E, D123G, K173A, D177E, T200A, Q207N, R211K, V245Q, A272P, T286A, E291D, V292I, I293V, L310I, V317A, Q334H, G335D, R356K, G359T, T377M, K390R, A400T, E404D, V435A, A437V, N447S, L452M, V466I, S468T, T470N, D471E, T477A, I482V, H483Q, L491S, S519N, K527R, K530R, V531I, A534S, A554S	C
	Pt228	05SK245B1	DQ369982	None	None			V35T, T39K, E40D, S48T, V60I, K122E, D123G, I159V, K173A, D177E, T200A, Q207E, V245K, A272P, R284K, T286A, I293V, P294T, P321S, D324E, G335D, R356K, M357R, G359T, A360T, K366R, T369A, K374T, T377K, T386I, K390R, A400I, E404D, V435A, A437V, L452I, R461K, V467I, S468T, D471E, H483Q, L491S, S519N, Q524E, K530R, A534S, V548I, A554S	C
Saad (2006)	MDS_01UAKV166	01UAKV166	DQ055201	None	None		E138K	V10I, V35T, E36D, T39N, E40D, K122E, D123G, S162A, K173A, Q174K, P176L, D177E, V179I, T200A, I202V, Q207E, V241E, V245Q	C
	MDS_01UAKV168	01UAKV168	DQ055203	None	None		E138K	V35T, E36A, T39E, E40D, S48T, K122E, D123G, S162A, K173A, Q174K, D177E, T200A, I202V, Q207E	C
Santos (2006)	B150	B150	DQ190959	None	None			K11R, V35T, E36A, T39E, E40D, S48T, K122E, D123S, A158S, K173V, D177E, T200A, R211K	C
	C160	C160	DQ190958	None	None			K11R, V35T, E36A, T39E, E40D, S48T, K122E, D123S, A158S, K173V, D177E, T200A, R211K	C
	C065RT	C065RT	DQ191017	None	None			T39E, E40D, S48T, K122E, D123S, A158S, K173V, D177E, G196R, T200A, E204D, Q207E, R211K, Q242H	C
	C075RT	C075RT	DQ191029	None	None			E36D, C38S, T39I, E40D, M41G, S48T, Q85X, P97A, V118X, D121H, K122E, I135T, A158S, K173A, D177E, T200A, Q207E, R211K, P225X	C
Vidal (2006)	NV_LBDS072	02.LBDS072	AM041011	None	None			V35M, E36A, T39E, E40D, S48T, K173T, D177E, G196K, T200A, Q207E, R211K, P243A, V245Q, K249R, D250E, A272P, K277R, E291D, V292I, I293V, D324E, Q334H, G335E, R356K, G359T, T377Q, K390R, A400T, E404D, V435A	C
	NV_LBS012	02.LBS012	AM040991	None	None			V35T, E36A, T39E, E40D, K43R, K122E, I142V, K173A, D177E, I195L, Q197K, T200A, Q207I, R211K, F214L, V245Q, A272P, T286A, E291D, V292I, I293V, E308L, Q334Y, G335D, R356K, M357R, G359T, K366R, T377M, W383Q, K390R, A400V, E404D, E415V, F416V, V435A	C
Visawapoka (2006)	KNH1268	KNH1268	AY945738	None	None			V35T, E36A, T39E, E40D, S48T, K122E, I135T, K173T, D177E, T200A, Q207E, V245Q, A272P, T286A, E291D, V292I, I293V, P294T, E297D, G335D, F346Y, R356K, M357L, G359T, T377Q, K385R, K390R, A400T, T403S, E404D, L452M, R461K, V466I, T470N, D471E, Q480H, H483K, L491S, S519N, K530R, A534S, A554S	C
Zarandia (2006)	03GEMZ033	03GEMZ033	DQ205288	None	None			V35T, E36A, T39E, E40D, S48T, K122E, K173T, Q174R, I178M, T200A, Q207E, R211K	C
Church (2007)	1194	1194	EF602584	None	None			P4PS, K20R, V21I, V35T, E36A, T39E, E40D, S48T, V60I, K122E, D123G, S162HY, K173A, D177E, T200A, Q207G, R211K, V245Q, A272P, G273GR, K275KR, T286A, E291ED, V292I, I293V	C
	3066	3066	EF602590	None	None			S3V, I5L, E6K, V35T, E36A, T39E, E40D, S48T, K122E, D123S, K166KR, K173L, D177E, T200A, Q207A, R211RK, V245Q, A272P, K277R, T286A, E291D, V292I, I293V, V317A, I329L, Q334R	C
	3086	3086	EF602594	None	None			V35T, E36A, T39E, E40D, S48T, K102Q, K122E, D123NS, S162H, K166R, K173A, D177E, T200A, Q207E, P243H, V245Q, A272P, K277KR, K281KR, T286A, E291D, V317A	C
	5089	5089	EF602605	None	None			E29ED, V35T, E36A, T39E, E40D, S48T, V60I, D121HY, K122E, K173AT, Q174K, D177E, T200A, Q207E, V245Q, E248ED, D250DE, A272P, K277R, T286TA, E291D, V292I, I293V, K311KR, V317VA, S322A	C
	9031	9031	EF602621	None	None			V35T, T39E, E40D, S48T, K173T, T200E, E204K, Q207E, F214L, K220KIM, E224ED, V245Q, A272P, T286A, E291D, V292I, L310LI	C
	9036	9036	EF602622	None	None			V35T, E36A, T39E, E40D, S48T, V60I, K122E, D123G, A158S, S162SI, K173A, D177E, T200A, Q207E, V245Q, A272P, I274IV, E291D, V292I, I293V	C
Galluzzo (2007)	24060	RW_24060	JQ220010	None	None		A98AG	T39E, E40D, S48T, K122E, D123G, K173AT, D177E, I178LM, T200A, Q207EK, R211K, V245Q	C
	23610	RW_23610	JQ220052	None	None			T39E, E40D, E53D, K122E, D123G, K173A, Q174R, D177E, T200E, Q207A, R211S, F214L, L228M, V245E	C
Gatanaga (2007)	C03-51110095-1	C03-51110095-1	AB640195	None	None			V21G, V35T, E36A, T39D, E40D, K104R, K122E, D123N, I135T, I142V, K173A, G196E, T200A, Q207A, R211K, F214L	C
	C04-2066230-1	C04-2066230-1	AB640496	None	None		V179D	V35T, T39E, E40D, S48T, D121N, D123E, R143K, K173A, D177E, I178L, T200A, Q207E, R211K, V245Q, E248T	C
Kassu (2007)	ETH-G-037	G-037	AB285770	None	None			V35T, E36EA, T39E, E40D, A98S, K122E, D123N, A158S, K173A, Q174K, D177E, T200A, Q207E, R211RK, K220KN, V245Q, D250E	C
	ETH-G-060	G-060	AB285777	None	None			V35T, E36A, T39E, E40D, K43R, K122E, I135M, K173A, Q174K, D177E, T200A, Q207E, R211K, V245Q, E248D	C
	ETH-G-075	G-075	AB285783	None	None			V35T, E36A, T39E, E40D, S48T, K173AT, Q174K, D177E, V179VI, I180IV, T200A, Q207E, R211K, V245Q, E248V	C
	ETH-G-089	G-089	AB285791	None	None			T27S, V35T, E36A, T39E, E40D, K49KR, V60I, A98AS, K101KR, K102IMR, K104R, K122E, D123GS, K173T, D177E, I178M, T200A, Q207E, V245Q	C
	ETH-G-135	G-135	AB285807	None	None		G190A	V35T, E36A, T39E, E40D, K49R, I50IV, K122E, A158S, K173A, Q174N, V179I, T200A, Q207E, R211K, V245Q	C
	ETH-G-139	G-139	AB285808	None	None			V8I, V35T, E36A, T39E, E40D, K49KR, K122E, D123S, A158S, K173T, Q174K, D177E, V179I, T200A, Q207E, R211K, V245Q, E248D, K249Q	C
	ETH-G-159	G-159	AB285812	None	None			V35T, E36A, T39E, E40D, A98S, K122E, D123S, I135IT, A158AS, K173A, D177E, T200A, E204EK, Q207E, V245Q, E248ED	C
	ETH-G-177	G-177	AB285814	None	None			V35T, T39E, E40D, K43KR, K102KQ, K122E, D123DGNS, K126N, K173A, D177E, T200A, Q207E, R211RK, H221HL, V245Q	C
	ETH-G-238	G-238	AB285833	None	None			E28V, V35T, E36A, T39E, E40D, K43R, K122E, D123S, A158S, K166R, K173A, D177E, Q207E, F214FL, K238Q, V245Q, K249Q, D250E	C
Novitsky (2007)	1194	1194_0201	EF026188	None	None			V35T, E36A, T39E, E40D, S48T, K122KE, D123DGNS, P170S, K173T, G196E, T200A, I202V, Q207EK, R211K, V245Q, A272P, K277R, E291D, V292I, I293V, K311KR	C
Seoighe (2007)	CHB122	06_C122EN	EF381768	None	None			V35T, T39E, E40D, S48T, K122E, D123N, S162C, K173I, Q174K, I178IV, T200A, Q207E, R211K, V245Q, E248D, A272P, K277R, T286A, E291D, V292I, I293V	C
	CHB152	06_C152EN	EF381790	None	None			E6K, V8I, M16K, L26M, V35T, E36A, T39E, E40D, S48T, K104R, K122E, K173T, Q174K, P176K, T200A, Q207E, R211Q, F214L, V245Q, E248D, A272P, E291D, V292I, I293V	C
	CHB21	06_C21EN	EF381828	None	None			P4PS, K11KQ, V35T, E36A, T39E, E40D, S48T, K122E, D123S, I135V, T165I, K166R, K173T, D177E, T200A, Q207E, V245Q, A272P, K277R, T286A, E291D, V292I	C
	CHB231	06_C231EN	EF381832	None	None			V35T, E36A, T39E, E40D, S48T, K122E, D123G, K173A, Q174K, D177E, T200A, Q207E, R211K, F214FL, V245Q, A272P, K277R, T286A, E291D, V292I, I293V	C
	CHB353	06_C353EN	EF381906	None	None		V179D	V35T, E36A, T39E, E40D, S48T, K104R, V118I, K122E, D123S, E138A, T139A, T165I, K173T, Q174K, I178IV, T200A, I202V, Q207EG, R211K, F214L, V245Q, E248DN, A272P, T286A, E291D, V292I, I293V	C
	CHB43	06_C43EN	EF381927	None	None			V35T, E36A, T39E, E40D, S48T, K122E, I142V, D177E, T200A, Q207E, R211K, V245Q, K277KR, T286A, E291D, V292I, I293V	C
	CHB77	06_C77EN	EF381951	None	None			K22KN, V35T, E36A, T39E, E40D, S48T, V60I, K122E, D123G, K173A, D177E, T200A, Q207E, V245E, A272P, T286A, E291D, V292I, I293V	C
	KEH169	06_K169EN	EF381997	None	None			P4S, V35T, E36A, T39E, E40D, S48T, V60I, K122E, D123S, E138A, T165I, K173A, Q174K, D177E, T200A, Q207E, R211K, V245Q, A272P, K277R, T286A, E291D, V292I, I293V	C
	KEH214	06_K214EN	EF382005	None	None			E6ED, K11N, V35T, E36Q, I37F, T39E, E40D, S48T, V60I, W88C, K122E, D123G, K166R, K173T, D177E, T200A, Q207E, R211K, V245Q, A272P, T286A, E291D, V292I, I293V	C
	KEH31	06_K31EN	EF382011	None	None			V35T, E36A, T39E, E40D, S48T, V60I, V118I, K122E, D123S, E138A, T139A, I142V, K166R, K173A, Q174N, T200A, Q207A, R211K, F214L, V245Q, A272P, K277R, T286A, E291D, V292I, I293V	C
	PL122	06_PL122EN	EF382067	None	None			E6Q, V21I, V35T, E36A, T39E, E40D, S48T, V60I, K122KE, T165TI, K173A, Q174K, D177E, T200A, Q207E, R211RK, V245K, A272P, Q278Y, K281R, T286TA, E291D, V292I, I293V	C
	PL262	06_PL262EN	EF382177	None	None			E6K, V35T, E36A, T39E, E40D, K122E, D123S, I135V, S162C, K173A, D177E, T200A, Q207E, R211RK, V245Q, A272P, K281R, T286A, E291D, V292I, I293V	C
	PL54	06_PL54EN	EF382189	None	None			V8VA, V35T, E36A, T39E, E40D, S48T, K64KN, K122E, D123N, K173A, D177E, T200A, Q207E, V245Q, K277R, T286A, E291D, V292I, I293V	C
	PL68	06_PL68EN	EF382203	None	None			V35T, E36A, T39E, E40D, S48T, K49R, K122E, D123G, S162N, K166R, K173A, D177E, T200A, E204EK, Q207E, V245Q, D250N, A272K, K277R, T286A, E291D, V292I	C
	PL319	06_PL319EN	EF382255	None	None			V35T, E36A, T39E, E40D, K104R, K122E, D123S, T139A, I142IV, A158S, T200A, Q207EV, R211RK, F214L, V245KQ, D250N, A272S, K277KR, E291D, V292I, I293V	C
	PL225	06_PL225EN	EF382287	None	None			V35T, E36A, T39E, E40D, S48T, K49R, K122A, D123E, T139TA, R172RS, K173IM, Q174K, T200A, Q207E, R211K, V245Q, A272S, K277R, E291D, V292I, I293V	C
	PL230	06_PL230EN	EF382291	None	None			V35T, E36A, T39E, E40D, S48T, V60I, K122E, D123G, I142IV, K173A, Q174K, D177E, T200A, I202V, R211K, F214FL, H221HY, V245Q, A272P, K277KR, E291D, V292I, I293V	C
	PL247	06_PL247EN	EF382299	None	None			V35T, E36A, T39E, E40D, S48T, K122E, K173A, D177E, T200A, Q207AEKT, R211AMTV, V245Q, A272P, K275Q, K277R, T286A, E291D, V292I, I293V	C
	PL272	06_PL272EN	EF382312	None	None			V35T, T39KN, E40D, S48T, V60I, K122E, D123G, K173A, D177E, I178M, T200A, Q207E, R211K, V245Q, A272P, K281R, E291D, V292I, I293V	C
	PL280	06_PL280EN	EF382316	None	None			P4ST, K11KR, V35T, E36A, T39E, E40D, S48T, K122E, D123E, A158S, K173A, D177E, T200A, Q207E, V245Q, A272P, K275R, Q278H, T286A, E291D, V292I, I293V	C
	PL302	06_PL302EN	EF382326	None	None			E6D, V8VI, V35T, E36A, T39E, E40D, K122E, D123N, A158S, K173T, Q174QR, T200A, Q207E, V245L, D250E, A272P, K277R, L279M, E291D, V292I, I293V	C
	PL339	06_PL339EN	EF382336	None	None			E6K, V35T, E36A, T39E, E40D, S48T, K122E, D123N, K173V, Q174K, D177E, Q207A, F214L, V245Q, A272P, K277R, T286A, V292I, I293V, E297K	C
Vidal (2007)	U0118	02BU.U0118	AM260219	None	None			V35T, E36A, T39E, E40D, K49R, K122E, D123G, I135T, K173T, D177E, T200A, Q207K, V245Q, A272P, T286A, E291D, V292I, I293V, P294S, Q334H, G335D, R356K, M357R, G359T, T377L, K390R, E404D	C
	U0139	02BU.U0139	AM260222	None	None			E6EK, K20R, V35T, E36A, T39E, E40D, K49R, K122E, D123G, K173T, D177E, T200A, Q207KT, V245Q, A272P, T286A, E291D, V292I, I293V, Q334H, G335D, R356K, M357R, G359T, T377L, K390R, E404D	C
	U2013	02BU.U2013	AM260233	None	None			K20R, V35T, E36A, T39E, E40D, S48T, K49R, K122E, D123G, E138G, A158S, K173A, D177E, I195V, G196R, T200A, Q207K, V245Q, A272P, K277R, T286A, E291D, V292I, I293V, G335D, R356K, G359T, T377L, S379C, K390R, A400T, E404D, E432D	C
	U2025	02BU.U2025	AM260234	None	None			V35T, T39E, E40D, K122E, D123S, I135IT, I142V, A158AS, K173A, D177E, T200A, E204K, Q207E, V245Q, E248N, D250E, A272P, K277R, T286A, E291D, I293V, I329L, Q334N, G335D, R356K, G359T, T377Q, S379C, K390R, K395KR, A400T, E404D, K431T	C
	U2201	02BU.U2201	AM260237	None	None			V35T, E36A, T39E, E40D, K122E, D123G, K173T, D177E, T200A, Q207E, V245Q, A272P, T286A, E291D, V292I, I293V, G335D, R356K, G359T, K366R, T377L, K390R, E404D	C
	U2809	02BU.U2809	AM260249	None	None			V35T, E36A, T39E, E40D, S48T, V60I, K122E, A158S, K173T, D177E, T200A, Q207K, R211K, L234X, V245E, E248D, A272P, K277R, E291D, V292I, I293V, Q332P, Q334H, G335E, R356K, G359T, T377Q, S379C, K390R, A400T, E404D, E413D, V435A	C
	U2905	02BU.U2905	AM260251	None	None			V35M, E36A, T39E, E40D, S48T, V60I, K122E, D123G, A158S, K173A, D177E, T200A, Q207N, R211K, V245Q, A272P, K275Q, V276T, K277R, K281R, T286A, E291D, V292I, I293V, G335D, R356K, M357R, G359T, T377Q, S379C, K390R, E404D, K431R	C
	U3124	02BU.U3124	AM260256	None	None			V35T, E36A, T39E, E40D, S48T, V60I, K122E, D123N, K173A, D177E, T200A, Q207E, R211K, V245Q, E248D, A272P, K277R, T286A, E291D, V292I, I293V, P294T, G335D, R356K, G359T, T377M, K390R, A400V, E404D	C
	U3135	02BU.U3135	AM260257	None	None			V35T, E36A, T39E, E40D, K122E, D123G, A158S, K173V, D177E, Q182E, T200A, Q207A, V245Q, A272P, K277R, T286A, E291D, V292I, I293V, G335D, R356K, M357R, G359T, T377L, V381I, K390R, E404D	C
	B1048	02BU.B1048	AM260262	None	None			V35T, E36A, T39E, E40D, S48T, V60I, K122E, D123S, K173A, Q174R, D177E, T200A, Q207E, V245Q, A272P, K277R, T286A, E291D, V292I, I293V, V317A, G335D, R356K, R358K, G359A, T377M, K390R, E404D	C
	B1078	02BU.B1078	AM260266	None	None			V35T, E36A, T39E, E40D, K49R, K122A, A158S, K166R, K173T, D177E, T200A, Q207E, V245Q, A272P, K277R, T286A, E291D, V292I, I293V, Q334N, G335D, R356K, G359T, T377L, K390R, T403M, E404D, V435I	C
	B1085	02BU.B1085	AM260268	None	None			V35T, E36A, T39E, E40D, S48T, V60I, T69S, K122E, K173A, D177E, T200A, Q207A, V245M, D250E, A272P, K277R, E291D, V292I, I293V, P294Q, G335E, R356K, G359T, T369V, Q373H, I375V, A376S, T377Q, S379C, K390R, E399D, A400I, E404D	C
	B1100	02BU.B1100	AM260270	None	None			V35T, E36A, T39E, E40D, K43R, K49R, K122E, D123T, Q145C, K173A, Q174K, D177E, T200A, Q207E, R211K, P243T, V245K, A272P, K277R, T286A, E291D, V292I, I293V, G335D, R356K, G359T, V365I, T377M, S379C, K390R, E399G, E404D, V435I	C
	SF426	02BU.SF426	AM260274	None	None			V35T, E36A, T39E, E40D, I47L, S48T, V60I, K122E, D123S, I135T, K173A, T200A, Q207K, V245Q, E248K, A272P, K277R, T286A, E291D, V292I, I293V, V317A, G335D, R356K, G359T, T377L, K390R, E404D, V435A, A437V	C
	U0211	02BU.U0211	AM260278	None	None			V35T, E36A, T39E, E40D, S48T, K122E, D123N, A158S, K173T, I178M, T200A, Q207E, V245Q, A272P, K277R, T286A, E291D, V292I, I293V, P294A, K311R, Q334H, G335D, R356K, G359T, T377Q, V381I, K390R, E404D, V435A	C
	U0333	02BU.U0333	AM260281	None	None			V35M, E36A, T39E, E40D, S48T, D123E, K173T, D177E, T200A, Q207K, R211K, V245Q, A272P, K277R, E291D, V292I, I293V, V317A, Q334D, G335D, R356K, G359T, T377L, K390R, E404D, V435A	C
	U0710	02BU.U0710	AM260290	None	None			E6K, V35T, E36A, T39E, E40D, K122E, D123G, T139A, I142T, K173A, I202V, Q207E, R211K, V245H, E248N, D250E, A272P, K277R, T286A, E291D, V292I, I293V, G335D, R356K, G359T, K366R, A376S, T377M, K390R, A400T, E404D, V435A	C
	U0727	02BU.U0727	AM260291	None	None			V35T, E36A, T39E, E40D, K122E, D123G, I142V, A158S, K173A, D177E, T200A, Q207E, R211K, V245Q, A272S, T286A, E291D, V292I, I293V, V317A, Q334N, R356K, M357A, G359A, V365I, T377R, V381I, K390R, L391I, A400T, E404D	C
	U0804	02BU.U0804	AM260293	None	None			V35T, E36A, T39E, E40D, S48T, D123G, S163X, K173A, D177E, T200A, Q207E, R211K, P243A, V245Q, A272P, K277R, E291D, V292I, I293V, G335D, R356K, G359T, K366R, T377M, K390R, A400T, E404D, V435A	C
	U0820	02BU.U0820	AM260297	None	None			K32R, V35T, E36A, T39E, E40D, I47L, S48T, V60I, D113N, K122E, D123S, K173A, Q174K, D177E, T200A, Q207D, R211K, V245Q, A272P, T286A, E291D, V292I, I293V, V317X, P321S, R356K, G359T, T377L, K390R, E404D, V435A	C
	U0824	02BU.U0824	AM260298	None	None			V35T, E36A, T39E, E40D, K49R, K122E, D123S, A158S, K173T, Q174K, D177E, T200A, Q207G, R211K, V245Q, A272P, K277R, T286A, E291D, V292I, I293V, L310I, D324E, Q334C, R356K, G359T, T377Q, K390R, E404D, P421S	C
	U0832	02BU.U0832	AM260300	None	None			V35T, E36A, T39E, E40D, S48T, K122E, D123N, K166R, K173A, D177E, T200A, Q207E, V245Q, E248D, D250E, A272S, K277R, T286A, E291D, V292I, I293V, I329L, G335D, F346L, R356K, G359T, K366R, T377Q, S379C, T386I, K390R, A400T, E404D, A437V	C
	U0932	02BU.U0932	AM260301	None	None			V35T, E36A, T39E, E40D, S48T, K122E, D123N, I142V, K173A, D177E, I178L, T200A, V245Q, D250E, K277R, T286A, E291D, V292I, I293V, Q334H, G335D, R356K, G359T, T377M, K390R, A400T, E404D	C
	U1101	02BU.U1101	AM260304	None	None			K20R, V35T, E36A, T39E, E40D, S48E, K49R, D121X, K122E, D123G, S162A, K173T, Q174K, T200A, I202V, Q207E, R211K, V245Q, A272P, K277R, T286A, E291D, V292I, I293V, E297G, E312Q, D324E, G335D, R356K, G359T, K366R, T377L, K390R, E404D	C
	U1206	02BU.U1206	AM260306	None	None			E28K, K32E, V35T, E36A, T39E, E40D, K49R, V60I, K173V, D177E, T200A, Q207D, R211K, V245K, D250E, A272P, K277R, T286A, E291D, V292I, I293V, Q334H, G335D, R356K, M357R, G359T, T377Q, K390R, A400T, E404D, I411L	C
	U1305	02BU.U1305	AM260307	None	None			V35T, E36A, T39E, E40D, K122E, D123S, K173A, D177E, T200A, E203D, Q207D, V245Q, E248D, A272P, T286A, E291D, V292I, I293V, Q334H, G335D, R356K, M357R, G359A, I375V, T377Q, K390R, E404D	C
	U1333	02BU.U1333	AM260309	None	None			V35T, E36A, T39E, E40D, S48T, D121H, K122E, A158S, K173V, Q174K, D177E, T200A, R211K, V245Q, A272P, Q278H, K281R, T286A, E291D, V292I, I293V, I326V, Q334N, G335D, R356K, G359T, K366R, T377L, K390R, E404D	C
	U1605	02BU.U1605	AM260314	None	None			V35T, T39K, E40D, K43R, S48T, V60I, Q145C, A158S, K173A, D177E, V179I, T200A, Q207E, R211K, V245Q, L246I, A272P, K277R, T286A, E291D, V292I, I293V, K311R, D324E, Q334H, G335D, F346Y, R356K, G359T, T369A, T377R, V381I, K390R, A400T, T403V, E404D	C
	U1625	02BU.U1625	AM260317	None	None			V35T, E36A, T39E, E40D, K49R, E53D, K122E, K173A, Q174K, D177E, T200E, Q207E, R211K, V245Q, E248D, A272P, K277R, E291D, V292I, I293V, Q334N, G335D, R356K, M357R, G359T, T377M, K390R, A400T, E404D	C
	U1734	02BU.U1734	AM260321	None	None			V35T, E36A, T39E, E40D, S48T, K49R, K122E, D123S, A158S, K173T, D177E, T200A, Q207E, V245Q, A272P, I274V, T286A, E291D, V292I, I293V, D324E, I326V, G335D, R356K, G359T, K366R, T377Q, K390R, E404D	C
von Wyl (2007)	26	7279065	EF449930	None	None			V35T, E36A, T39E, E40D, Y56C, A98S, K122E, A158S, K173A, T200A, Q207G, R211K	C
	37	5933971	EF449943	None	None			V35T, T39E, E40D, K43R, K122E, D123S, K173A, D177E, I178M, G196Q, T200V, Q207D, R211K	C
Chang (2008)	TW9577a	TW9577a		None	None			V35T, E36A, T39E, E40D, S48T, T69X, K122E, D123S, K173T, D177E, T200A, I202V, Q207E, V245Q	C
Deho (2008)	192	192	EU244658	None	None			V35T, E36A, T39E, E40D, K104R, K122E, D123N, E138A, K173T, Q174K, T200A, Q207E, R211K, F214L	C
Jacobs (2008)	1514B	1514B	EF602177	None	None			E6D, K20R, V35T, E36A, T39E, E40D, S48T, K49R, V60I, K122E, D123G, K166R, K173T, D177E, T200A, Q207E, R211K, V245Q	C
	1776	1776	EF602216	None	None			K20R, V35T, E36A, T39E, E40D, S48T, K122E, K173I, Q174K, T200A, K201X, Q207E	C
	1816	1816	EF602245	None	None		Y181C	V35T, T39N, E40D, V60I, K166R, K173A, D177G, T200A, Q207E, R211K, V245Q	C
Kamoto (2008)	MW5	MW5	JQ617133	None	None			E6K, V35T, E36A, T39E, E40D, S48T, E53D, K104N, K122E, D123G, S162Y, K173A, E194K, G196E, T200A, Q207E, R211K, V245Q	C
	MW18	MW18	JQ617140	None	None			V8I, V35T, E36A, T39E, E40D, S48T, V118I, K122E, K173T, T200A, Q207G, R211K, F214L, V245Q	C
	MW28	MW28	JQ617145	None	None			V35M, E36A, T39E, E40D, S48T, K122E, A158S, K173A, Q174K, D177E, T200A, L205LS, Q207D, R211K, P243S, V245K	C
	MW39	MW39	JQ617155	None	None			V35T, E36A, T39E, E40D, S48T, K122E, D123G, K173T, Q174K, D177E, T200A, Q207E, R211K, V245Q, D250E	C
	MW54	MW54	JQ617168	None	None			V35T, T39K, E40D, S48T, K122E, A158S, K173A, Q174K, D177E, G196M, T200A, I202V, Q207K, V245Q	C
	MW67	MW67	JQ617176	None	None			P4S, V35T, E36A, T39E, E40D, S48T, K122E, D123G, K173T, D177E, T200A, Q207E, R211K, V245H, K249Q	C
	MW58	MW58	JQ617182	None	None			P4T, V35T, E36A, T39E, E40D, S48T, V118I, K122E, T165I, Q174K, T200A, Q207E, R211K, F214L, V245L	C
Lloyd (2008)	TX012	03HN_TX012	EU312784	None	None			V35T, E36A, T39E, E40D, S48T, K122E, I142T, K173T, Q174K, T200A, Q207G, R211K, F214L, V245Q, A272P, K277R, T286A, E291D, V292I	C
Matthews (2008)	PS008	PS008	FJ199590	None	None			V35T, E36A, T39E, E40D, S48T, V60I, K103R, K122E, D123G, K173T, D177E, T200A, Q207E, V245K, A272K, K277R, T286A, E291D, V292I, I293V, D324E, G335D, R356K, M357R, R358K, G359A, T377L, W383R, K390R, A400T, E404D, I434M, V435A, A437V, N447S, L452I, S468T, L469I, T470S, D471E, H483Q, L491S, S519N, Q524E, K530R, A534S, A554S	C
	PS037	PS037	FJ199618	None	None			E6T, V8I, V35T, E36A, T39A, E40D, S48T, K122E, D123G, S162C, K173A, D177E, T200A, Q207E, R211K, V245Q, A272P, K277R, T286A, E291D, V292I, P294T, R307K, Q334H, G335D, R356K, M357L, G359A, T377M, K390R, A400T, E404D, V435A, L452I, R461K, V466I, S468T, T470N, D471E, T477A, H483Q, L491S, L517I, S519N, I521V, K530R, A534S	C
	PS052	PS052	FJ199633	None	None			V35T, E36A, T39E, E40D, S48T, K66R, D121E, K122E, I135V, K173A, D177E, T200A, Q207E, R211K, V245Q, A272S, K277R, L283I, T286V, E291D, V292I, I293V, I329L, Q334Y, G335D, Y339D, R356K, G359T, K390R, A400T, V435A, G436E, L452I, V466I, V467I, S468T, D471E, H483Q, L491S, S519N, K530R, V531I, V548I, A554S	C
	PS123	PS123	FJ199695	None	None			E6T, T7P, V35T, E36A, T39E, E40D, S48T, V60I, K122E, D123S, K173A, Q174K, D177E, T200A, Q207E, F214L, V245Q, A272S, K277R, T286A, E291D, V292I, I293V, Q334D, R356K, G359S, T377L, A400T, E404D, P421L, Q428H, V435A, V466I, T470S, D471E, H483Q, L491S, S515P, K530R, A534S, A554S	C
	PS152	PS152	FJ199716	None	None			V21I, V35T, E36A, T39E, E40D, V60I, W88C, K102R, V118I, K122E, D123G, I142T, K166R, K173A, Q174K, D177E, T200A, Q207E, R211K, F214L, V245Q, A272S, K277R, T286A, E291D, V292I, I293V, R356K, G359T, A360T, T369A, T377L, K390R, A400I, E404D, N418S, V435A, E449K, L452M, K465E, V466I, S468P, D471E, L491S, I506L, S519N, K530R, A534S, A554K	C
	PS157	PS157	FJ199720	None	None			V35T, E36A, T39E, E40D, S48T, E53D, V60I, K122E, D123G, K173A, Q174K, D177E, T200A, Q207E, R211K, V245Q, A272P, K277R, T286A, E291D, V292I, I293V, K311R, Q334N, G335D, F346H, R358K, G359T, T377M, K390R, A400T, E404D, V435A, R461K, V466I, V467I, D471E, H483Q, L491S, S519N, Q524E, K530R, A534S	C
	PS187	PS187	FJ199745	None	None			E6A, K11N, V35T, E36A, T39E, E40D, S48T, V60I, K122E, D123G, K173A, Q174K, D177E, T200A, Q207A, R211K, V245Q, A272P, K277R, T286A, E291D, V292I, I293V, Q334D, G335D, R356K, M357R, G359T, A376S, T377M, K390R, A400I, E404D, V435A, V467I, S468P, D471E, H483Q, L491S	C
	PS408	PS408	FJ199815	None	None			V35T, E36A, T39E, E40D, S48T, K122E, D123N	C
	PS417	PS417	FJ199820	None	None			V35T, E36A, T39E, E40D, S48T, V60I, K122E	C
	SK033	SK033	FJ199860	None	None			V35T, E36A, T39E, E40D, V60I, R72G, D121Y, K122E, S162A, K173A, Q174K, D177E, G196E, T200A, Q207E, R211K, V245Q, D250E, A272P, E291D, V292I, I293V, Q334D, G335D, R356K, M357R, G359T, T377L, K390R, E399D, A400I, E404D, V435A, L452I, V466I, D471E, H483Q, L491S, L517V, S519N, K527N, K530R, A554S	C
	SK113	SK113	FJ199900	None	None			P4S, E6D, V35T, E36A, T39E, E40D, W71~, K122E, D123S, S134G, A158S, K173T, T200A, Q207E, R211K, V245L, A272P, K277R, T286A, E291D, V292I, I293V, V317A, Q334R, G335D, R356K, M357L, G359T, T377L, K390R, A400T, E404D, V435A, R461K, D471E, T477A, H483Q, S519N, K527N, K530R, V531I, A534S, A554S, K558R	C
	SK168	SK168	FJ199939	None	None			V35T, E36A, T39E, E40D, S48T, K122E, D123G, K173A, Q174K, D177E, I195~, T200A, Q207E, R211K, V245Q, A272P, K277R, T286A, E291D, V292I, I293V, V317A, S322A, K331R, Q334Y, G335D, R356K, G359T, T377M, K390R, A400T, E404D, V435A, L452I, V466I, S468T, T470S, D471E, H483Q, L491S, S519N, K530R, A534S, A554S	C
	SK181	SK181	FJ199950	None	None			V35T, T39E, E40D, K122E, D123G, K166R, K173A, D177E, G196E, T200A, I202V, E204K, Q207D, R211K, V245Q, E248T, D250E, A272P, E291D, V292I, I293V, P313T, V317A, Q334H, G335D, R356K, G359T, T377M, K390R, A400T, E404D, I434T, A437V, L452V, V467I, S468T, L469I, D471E, H483Q, L491S, Q509R, S519N, K530R, A534S, A554S	C
	SK206	SK206	FJ199964	None	None		K103N	V35T, E36A, T39E, E40D, S48T, V60I, K122E, D123G, K173A, D177E, T200A, Q207N, R211K, V245Q, A272P, T286A, E291D, V292I, I293V, L310I, V317A, Q334H, G335D, R356K, G359T, T377M, K390R, A400T, E404D, V435A, A437V, N447S, L452M, V466I, S468T, T470N, D471E, T477A, I482V, H483Q, L491S, S519N, K527R, K530R, V531I, A534S, A554S	C
	SK238	SK238	FJ199985	None	None			E6D, V21I, V35T, E36A, T39E, E40D, S48T, V60I, I135V, K173A, Q174K, T200A, Q207V, R211K, V245Q, A272P, K277R, T286A, E291D, I293V, I326V, Q334N, G335D, R356K, G359T, T369A, A371T, T377L, K390R, A400T, E404D, V435A, E449D, L452K, V466I, S468T, D471E, H483Q, L491S, S519N, K527N, K530R, A534S	C
	SK245	SK245	FJ199990	None	None			V35T, T39K, E40D, S48T, V60I, K122E, D123G, I159V, K173A, D177E, T200A, Q207E, V245K, A272P, R284K, T286A, I293V, P294T, P321S, D324E, G335D, R356K, M357R, G359T, A360T, K366R, T369A, K374T, T377K, T386I, K390R, A400I, E404D, V435A, A437V, L452I, R461K, V467I, S468T, D471E, H483Q, L491S, S519N, Q524E, K530R, A534S, V548I, A554S	C
Nyombi (2008)	TBK070	TBK070	EU251757	None	None			V35T, E36A, T39E, E40D, S48E, K49R, K173V, Q174QK, D177E, T200A, Q207D, R211K, V245Q, A272P, K275R, Q278N, T286A, E291A, V292T, I293V, G335D, R356K, M357V, G359T, K366R, T377Q	C
	TBK075	TBK075	EU251762	None	None			E6K, V35T, E36A, T39E, E40D, S48T, K122E, D123DGNS, A158S, K173A, D177E, T200A, Q207E, R211K, V245Q, A272P, K277KR, T286A, E291D, V292I, I293V, G335D, P345Q, F346Y, R356K, G359T, T377L	C
	TBK096	TBK096	EU251778	None	None			V35T, E36A, T39E, E40D, S48T, K122E, K173A, Q174K, D177E, G196R, T200A, R211K, F214L, V245Q, D250E, S251H, A272P, G273R, Q278N, T286A, E291D, V292I, I293V, L310I, Q334E, G335D, F346Y, R356K, R358S, G359T, V365I	C
	TMS012	TMS012	EU251792	None	None			T27S, V35T, E36A, T39E, E40D, G45E, S48T, V60VI, K122E, I135T, S162C, E169A, K173A, D177E, T200A, Q207E, R211K, V245Q, T286A, E291D, V292I, K311R, D324E, G335E, F346H, K347R, R356K, G359T	C
	TMS202	TMS202	EU251839	None	None			V21VI, E28K, K32E, V35T, E36A, T39E, E40D, D123N, K173T, Q174K, D177E, T200A, Q207E, R211K, V245Q, D250E, S251D, A272P, K277R, T286A, V292I, I293V, G335D, R356K, G359T, T377Q	C
	TMS205	TMS205	EU251842	None	None		V179E	K20M, V35T, E36A, T39E, E40D, K43R, S48T, K49R, V60I, K102Q, D123N, I135K, K173A, D177E, T200A, Q207E, V245Q, A272P, K275R, K277R, Q278H, T286A, E291D, V292I, I293V, A327T, G335D, R356K	C
	TMS326	TMS326	EU251871	None	None		P225H	V35T, E36A, T39E, E40D, S48T, K122E, D123S, K173A, D177E, T200A, Q207K, V245Q, A272S, K277R, T286A, E291D, V292I, I293V, H315Y, G335D, E344D, F346H, R356K, G359T, T377L	C
Pillay (2008)	8762	2002_8762	JQ070658	None	None			V35T, E36A, T39E, E40D, S48T, Y56YC, V60I, K122E, K166R, K173A, D177E, T200AE, Q207S, R211K, D218DN, E233EA	C
	0138	2004_0138	JQ070678	None	None			V35T, E36A, T39E, E40D, S48T, K166R, K173V, Q174K, D177E, T200A, Q207A, F214L	C
Somi (2008)	KM-05-135	KM-05-135	JQ616959	None	None			V35T, E36A, T39E, E40D, S48T, K122E, D123G, E138A, K173A, Q174K, T200E, V245N	C
	OY-05-275	OY-05-275		None	None			V35T, E36A, T39E, E40D, S48T, V60I, K102Q, K173A, D177E, T200A, Q207E, V245K, D250E, S251A	C
	OY-05-390	OY-05-390	JQ616971	None	None			V35T, E40D, S48T, V60I, K102Q, K122E, D123S, K173A, D177E, I178V, T200A, Q207E, V245Q, E248N	C
Aghokeng (2009)	CDG0338	CDG0338	GU191633	None	None			V35T, E36D, E40D, N54NY, V60I, D121H, K122E, D123S, K173A, Q174K, D177E, T200A, I202V, E204EG, Q207A, R211K, P243PS, V245HQ, A272P, K281R, T286A, E291D, V292I, I293V, P294T, D324Q, I326T, I329V, Q334L, G335D, F346Y, R356K, M357R, R358G, G359S, E370D, A371V, I375IV, V381I, T386V, Q394R, E399D, A400V	C
Bartolo (2009)	HJM64	01AOHJM64	EU068390	None	None			V35T, E36A, T39E, E40D, S48T, K122E, D123N, K173R, T200A, Q207A, R211K, V245Q, A272P, I274V, K275Q, T286A, E291D, I293V	C
	HM183	01AOHM183	EU068394	None	None			V35T, E36A, T39E, E40D, E44K, S48T, I135V, K166R, K173A, D177E, T200A, Q207E, V245Q, T286A, E291D, V292I, I293V	C
Brumme (2009)	E5539	E5539	GQ371849	None	None			V35T, E36A, T39E, E40D, K122E, D123N, K173A, D177E, I178M, T200A, E204K, Q207E, F214L	C
Dalai (2009)	SC011	SC011_06	GQ463287	None	None		V179D	T27S, V35T, T39E, E40D, S48T, V60I, K122E, D123S, I135T, E138A, K173T, Q174K, T200A, I202V, Q207E, R211K, F214L	C
	SC274	SC274_06	GQ463304	None	None			V35T, E36A, T39E, E40D, S48T, K122E, K173T, D177E, T200A, Q207E, R211K	C
	SC292	SC292_06	GQ463308	None	None			V35M, E36A, T39E, E40D, S48T, K122E, D123G, K173A, D177E, T200A, Q207E, R211K	C
	SC306	SC306_06	GQ463310	None	None			P4S, D17A, V35T, E36A, T39E, E40D, S48T, H96HP, V118I, K122E, D123N, K173E, D177E, I178L, D192N, T200A, E204Q, Q207E, R211K, F214L	C
	SC522	SC522_06	GQ463318	None	None			V35T, E36A, T39E, E40D, S48T, K122E, D123G, K173T, D177E, T200A, Q207EG	C
	SC527	SC527_06	GQ463320	None	None			P4S, V35T, E36A, T39E, E40D, S48T, K122E, D123N, K173A, D177G, T200A, Q207E	C
	SC756	SC756_06	GQ463331	None	None			V35T, E36A, T39E, E40D, S48T, K122P, D123S, K166R, K173A, Q174K, D177E, T200A, Q207E	C
	0026T	0026T_91	GQ463348	None	None			V35T, E36A, T39E, E40D, S48T, V60I, D76DN, G93E, K122E, D123G, K173A, D177E, T200A, Q207E, R211K	C
	0119C	0119C_91	GQ463358	None	None			V35T, E36A, T39E, E40D, S48T, K122E, D123G, K166KR, K173AE, D177E, T200A, Q207E	C
	0247Y	0247Y_91	GQ463367	None	None			V35T, E36A, T39E, E40D, S48T, K122E, D123G, K166R, K173A, D177E, T200A, Q207E	C
	0250C	0250C_91	GQ463368	None	None			V35T, E36A, T39E, E40D, S48T, K122E, D123G, K166R, K173A, D177E, T200A, Q207E	C
	0154Z	0154Z_91	GQ463375	None	None			V35T, E36A, T39E, E40D, S48T, K122E, D123G, K166R, K173A, D177E, I178M, G196R, T200A, Q207E	C
	3028	3028_98	GQ463394	None	None			V35T, E36A, T39E, E40D, S48T, K122E, K173T, T200A, Q207E	C
	3029	3029_98	GQ463395	None	None			V35T, E36A, T39E, E40D, S48T, V60I, K122E, D123G, K173A, D177E, T200A, Q207E, R211K	C
	3033	3033_98	GQ463398	None	None			V35T, E36A, T39E, E40D, S48T, K122E, D123G, K173A, D177G, T200A, Q207N, R211K	C
	3040	3040_98	GQ463405	None	None			V35T, E36A, T39E, E40D, K122E, S162A, K173T, D177E, T200A, Q207E	C
	3056	3056_98	GQ463418	None	None			V35T, E36A, T39E, E40D, S48T, K122E, D123N, K173A, D177E, T200A, Q207E, R211K	C
	3058	3058_98	GQ463420	None	None			T27S, V35M, E36A, T39E, E40D, S48T, K122E, D123G, S162C, K173A, Q174K, D177E, T200A, Q207E, R211K, P226X	C
	3092	3092_98	GQ463425	None	None			K13KT, I31V, K32KE, V35T, E36A, I37IRS, T39E, E40D, S48T, R72RI, K122E, D123N, E138A, I142T, S162SR, F171Y, K173T, Q174K, T200A, Q207E, F214L	C
	3123	3123_98	GQ463429	None	None		V179D	V35T, E36A, T39E, E40D, S48T, K122E, D123G, V148VG, A158S, K173T, Q174K, T200A, I202V, Q207E	C
Deshpande (2009)	Pat381	in3rt	FJ530560	None	None			V35T, E36A, T39D, E40D, S48T, V60I, D121Y, K122E, I135T, S162A, K173T, D177E, T200A, Q207E, R211K, V245H	C
	Pat377	in8rt	FJ530564	None	None			K30E, V35T, E36A, T39E, E40D, S48T, V60I, D121Y, K122E, I135T, S162A, K173T, D177E, T200A, Q207E, R211K	C
	Pat365	in22rt	FJ530576	None	None			V8D, V35T, E36A, T39E, E40D, S48T, V60I, D76DN, D121Y, K122E, I135T, S162A, K173T, D177E, T200A, Q207E, R211K	C
	Pat290	in106rt	FJ530651	None	None			K30KE, V35T, E36A, T39D, E40D, S48T, K49R, V60I, D121Y, K122E, A158S, S162A, K166R, K173A, D177E, T200A, K201KR, Q207E, V245K	C
Fujisaki (2009)	588	588	AB442259	None	None			V35T, T39E, E40D, S48T, K122E, D123G, K173A, Q174K, D177E, T200A, Q207E	C
Rajesh (2009)	N45	TRCNRT45	FJ595289	None	None			V35T, E36A, T39E, E40D, S48T, V60I, D121Y, K122E, I135T, S162A, K173E, Q174QH, D177DE, T200A, Q207E	C
Vercauteren (2009)	pt2146	328131992	GQ398878	None	None			V35L, E36N, I37F, T39E, E40D, S48T, V60I, I135V, S162C, K173A, Q174K, D177E, V189I, T200A, K201I, I202V, Q207E, R211K, V245Q	C
	pt2119	595986209	GQ398905	None	None			V35L, E36N, I37F, T39E, E40D, K49KR, K122E, D123GS, A158S, K173A, D177E, T200AV, Q207E, R211RK, V245Q	C
	pt1996	1346500444	GQ399028	None	None			V35T, E36A, T39E, E40D, K64KR, K173A, D177E, I178IV, V179I, G196E, T200V, Q207E, V245Q, D250E, S251I, A272P, T286A, E291D, V292I, I293V, K311KR	C
	pt1901	1899096765	GQ399123	None	None			T39E, E40D, K43R, K122E, D123S, S162SC, K173A, D177E, T200A, E204EK, Q207E, V245Q	C
	pt1897	1938495309	GQ399127	None	None			P4S, V35T, E36A, T39E, E40D, S48T, K122E, D123N, I135V, S162C, K166R, K173AT, D177E, T200A, Q207R, R211KQ, V245Q, A272P, T286A, E291D, V292I, I293V, I329L, Q334E	C
	pt1566	3946130214	GQ399458	None	None	K70KQ		T39TK, E40D, S48T, E53ED, N57NH, I63IMR, F116L, K122D, D123S, K166R, D177E, T200A, Q207E, R211K, V245Q	C
	pt1527	4104583469	GQ399497	None	None			V35L, E36N, I37F, T39E, E40D, S48T, K122E, D123DG, I142V, K173IT, Q174QK, D177EG, T200A, Q207E, R211K, V245Q	C
	pt1031	7003794670	GQ399993	None	None			V35L, E36N, I37F, T39E, E40D, K43R, V60VG, K122E, D123G, A158S, K173A, D177E, T200A, Q207G, V245Q	C
	pt787	8441749326	GQ400237	None	None			V35T, E36A, T39E, E40D, K122E, D123G, I135T, S162C, K173T, D177E, T200A, Q207E, V245Q, A272P, T286A, E291D, V292I, I293V	C
	pt651	9117848907	GQ400373	None	None			T39E, E40D, S48T, V60I, D76DN, Q91QH, A98S, K122E, D123S, A158AS, K166R, K173A, D177E, T200A, Q207E, V245Q	C
	pt429	DSIB5OlVib	GQ400595	None	None			T27S, V35T, E36A, T39E, E40D, S48T, K49R, K122E, D123N, Q145C, T165TI, E169A, K173A, D177E, T200A, Q207E, R211K	C
	pt425	Ec8M4v5PjG	GQ400599	None	None			V35T, E36A, T39E, E40D, K43R, K122E, D123G, A158S, K173T, D177E, I178M, T200A, Q207K, F214L, V245Q	C
	pt380	gPH7Vj8rpT	GQ400644	None	None			K20R, V35T, E36A, T39E, E40D, S48T, K122E, D123S, I135T, S162A, K166KR, K173A, G196K, Q197E, T200A, Q207E, V245Q	C
	pt31	YgYVEmdcb2	GQ400993	None	None			V35T, T39E, E40D, S48T, K49R, V60I, K122E, D123S, I135T, K173T, D177E, T200A, Q207E, V245Q, D250E	C
	pt30	YH1xmA932i	GQ400994	None	None			V35T, T39K, E40D, A98S, K122E, D123S, K173T, D177E, T200A, Q207E, R211K	C
Bonura (2010)	1173_36	1173_36	GU969538	None	None			K20R, V35T, E36A, T39E, E40D, V60I, K122E, D123S, I135T, I142IV, K173A, Q174K, D177E, T200TA, Q207E, R211K, V245Q, A272P, K277R, T286A, E291D, V292I, I293V	C
	1199_92	1199_92	GU969550	None	None			V35T, E36A, T39E, E40D, K122E, D123S, I135T, E138A, T139I, S162C, K173T, T200A, Q207AD, R211K, V245Q, A272P, K277R, T286A, E291D, V292I, I293V, K311R	C
Chaturbhuj (2010)	2-004	2-004	FJ878950	None	None			K20R, V35T, E36A, T39E, E40D, S48T, V60I, D121Y, K122E, S162A, K166R, K173A, Q174R, D177E, I178M, T200A, E204EK, Q207E, R211K, V245Q, A272P, K277R, T286A, E291D, V292I, I293V, L310I, V317A, D324E	C
Descamps (2010)	569odyssee	569odyssee	HQ718402	None	None			V35T, E36A, T39E, E40D, K49R, V60VI, K122E, D123S, K173A, Q174K, D177E, T200A, Q207E, V245Q, D250T, A272P, K277R, T286A, E291D, V292I, I293V, P294S, K331N	C
Djoko (2010)	613	CD0866	FR666613	None	None			P4S, E6ED, V35T, E36A, T39E, E40D, S48T, V60I, D121H, K122E, I135T, K173E, Q174K, P176K, T200A, I202IV, Q207E, R211K, V245K, E248D, D250E, S251SN, A272P, K277R, E291D, V292I, I293V, V317A, Q334N, R356RK, G359T	C
	649	CD3522	FR666649	None	None			K20R, V35T, E36A, T39E, E40D, S48T, D121H, K122E, E138A, T139A, T165I, K173T, Q174K, I178L, T200A, Q207E, F214L, V245Q, E248D, A272P, K275KR, Q278HY, T286A, E291D, V292I, I293V, Q334H, G335D, R356K, G359T	C
Gonzalez (2010)	SO_2	SO_2	GQ433887	None	None			V35T, E36A, T39E, E40D, S48T, V60I, K122E, D123N, K173T, Q174K, T200A, Q207E, R211K, V245Q, K277R, T286A, E291D, V292I, I293V, E297K	C
	1084_M23m	1084_M23m	GQ427127	None	None			K20R, V35T, E36A, T39E, E40D, S48T, K122E, D123N, E138A, T139A, K173T, Q174K, T200A, I202V, Q207A, R211K, F214L, V245Q, A272P, T286A, E291D, V292I, I293V	C
	1690_M00m	1690_M00m	GQ427134	None	None			V35T, E36A, T39E, E40D, S48T, L80R, K104R, K122E, D123G, S162A, K173T, D177E, T200A, Q207E, R211K, V245Q, A272P, R284K, T286A, E291D, V292I, I293V	C
	KLesa2	KLesa2	GQ433820	None	None			V35T, E36A, T39E, E40D, S48T, K104R, K122E, D123N, K173A, Q174K, D177E, T200A, Q207E, R211K, V245Q, A272P, K277R, T286A, E291D, V292I	C
	LUK6	LUK6	GQ433854	None	None			P4S, V35T, E36A, T39E, E40D, S48T, T69S, K122E, D123S, K173T, D177E, T200A, E204K, Q207E, V245Q, D250E, A272P, K277R, T286A, E291D, V292I, I293V	C
	MA6	MA6	GQ433867	None	None			V35T, E36A, T39E, E40D, S48T, V60I, K122E, D123S, I135V, E138A, K173M, Q174K, D177N, T200A, Q207E, R211K, F214L, V245E, E248D, D250E, L264Y, T286A, E291D, I293V	C
	MO9	MO9	GQ433879	None	None			V35T, E36A, T39E, E40D, S48T, V60I, K122E, D123S, K173A, D177E, I178M, T200A, Q207D, R211K, V245Q, E248D, D250E, A272P, T286A, E291D, V292I, I293V, E297A	C
	ND_6	ND_6	GQ433884	None	None			V35T, T39E, E40D, S48T, K102Q, K122E, D123S, T165I, K173T, Q174K, T200A, R211K, V245Q, D250E, S251N, A272P, K277R, T286A, E291D, V292I, I293V	C
Hamers (2010)	300039	CP076300039	HM119633	None	None			V35T, E36A, T39E, E40D, K122E, D123S, I135T, S162SC, T165TI, K173T, D177E, T200A, Q207E, R211K, V241I, V245Q, A272S, E291D, V292I, I293V	C
	300046	CP076300046	HM119638	None	None		A98G	V35T, E36A, T39E, E40D, S48T, V60I, V118I, K122E, D123G, E138A, S162SC, T165TI, K173T, T200A, I202V, Q207T, R211RK, F214L, V245Q, A272P, I274IV, T286A, V292I, I293V, K311R	C
	300052	CP076300052	HM119643	None	None			V8VIM, V35T, E36A, T39E, E40D, S48T, K49KR, V60I, K122KE, K173AT, T200A, Q207E, R211K, V245Q, D250E, K277KR, T286A, E291D, V292VI, I293V, E297EA, E300EQ	C
	300057	CP076300057	HM119646	None	None			V35T, E36EA, T39E, E40D, S48T, Q91X, I94X, K173IT, D177E, I178IV, T200A, Q207E, R211RK, V245Q, A272P, T286TA, E291D, V292I, I293V, K311KR	C
	300067	CP076300067	HM119655	None	None		K103N, Y181C	V35T, E36A, T39E, E40D, D123E, I142V, K173T, Q174K, T200A, Q207E, R211K, H221Y, V245Q, D250E, A272P, E291D, V292I, I293V	C
	300135	CP076300135	HM119711	None	None			V8I, V35T, E36A, T39E, E40D, T107P, K122E, D123N, A158S, K173T, Q174K, D177E, T200A, Q207D, R211K, V245M, A272P, K277R, T286A, E291D, V292I, I293V, E305D, N306Y, I309X, K311R	C
	300167	CP076300167	HM119741	None	None			T27S, V35T, E36A, T39E, E40D, S48T, K122E, S162A, K173T, D177E, T200A, Q207G, R211K, V245Q, K277R, T286A, E291D, V292I, I293V, S322Q, D324X	C
	300181	CP076300181	HM119753	None	None			V35T, T39E, E40D, D76X, H96X, K122E, D123G, K173IT, Q174K, D177E, T200A, Q207E, R211K, V245Q, E248V, A272P, I274IV, K277R, Q278N, E291D, V292I, I293V	C
	300190	CP076300190	HM119761	None	None			M16MT, V35T, T39N, E40D, S48T, E53D, V118I, D121DA, K122E, E138A, R172K, D177E, T200A, Q207E, R211K, F214L, V245Q, E248DN, D250E, S251SN, A272P, K277R, T286A, E291D, V292I, I293V, E308A, I309F, E312EQ, H315HL, D324E, L325I, E328K	C
	300245	CP076300245	HM119803	None	None			V35T, E36A, T39E, E40D, S48T, V60I, F87X, L100X, K122E, D123S, K173A, T200A, Q207E, R211K, V245K, D250E, A272P, K277KR, E291D, V292I, I293V, P294T	C
	300252	CP076300252	HM119804	None	None		V179D	K20R, V35T, E36A, T39E, E40D, K103R, K122E, D123S, E138A, S162C, K173T, Q174R, D177N, T200E, E203K, R206Q, Q207D, R211K, P243T, V245Q, A272P, K275Q, V276I, E291D, V292I, I293V, I329X	C
	300284	CP076300284	HM119818	None	None			K20KR, V35T, E36A, T39E, E40D, S48T, V60I, K122E, D123S, K166R, K173A, D177E, I178M, G196K, T200A, I202IV, Q207E, R211K, V245Q, D250E, A272P, K277R, T286A, E291D, V292I, I293V, L310I	C
	300289	CP076300289	HM119822	None	None			V35T, E36A, T39E, E40D, S48T, K122E, D123S, K173A, T200A, Q207E, R211K, V245Q, P247A, A272P, K275R, Q278Y, T286A, E291D, V292I, I293V, E297K, R307X, L310S	C
	300414	CP076300414	HM119838	None	None			P4H, E6EK, V35T, E36A, T39E, E40D, S48T, K122E, D123G, K173A, Q174QK, D177E, T200A, Q207E, R211K, V245Q, A272P, K277R, E291D, V292I, I293V, V317A	C
	300440	CP076300440	HM119862	None	None			P4PS, E6KT, V35T, E36A, T39E, E40D, S48T, K122E, D123S, A158S, K173A, D177G, I195T, T200A, Q207E, R211K, V245M, D250E, A272P, K277R, T286A, A288T, E291D, V292I, I293V	C
	300482	CP076300482	HM119901	None	None			V35T, E36A, T39E, E40D, S48T, V60I, K122E, D123S, I135T, A158AS, K173AITV, Q174K, T200A, Q207E, R211K, F214L, V245Q, A272P, K277R, E291D, V292I, I293V, K311R	C
	300483	CP076300483	HM119902	None	None		K103N	E6D, V35T, E36A, T39E, E40D, K122E, D123G, S162C, K173A, Q174K, G196E, T200A, E203D, Q207D, R211RK, V245Q, E248D, A272P, E291D, V292I, I293V, P294Q, E328K	C
	300492	CP076300492	HM119911	None	None		A98G	V35T, T39E, E40D, S48T, K122E, D123G, I142IV, K173A, Q174K, D177E, G196M, T200A, Q207E, R211K, V245Q, D250E, A272P, K277R, E291D, I293V	C
	300500	CP076300500	HM119919	None	None			V8I, V21VI, V35T, E36A, T39E, E40D, S48T, V60I, K122E, D123N, I135T, K173T, Q174K, D177E, T200DEKN, Q207E, R211K, V245Q, A272Q, T286A, A288AS, E291D, V292VI, I293V	C
	300508	CP076300508	HM119925	None	None			A33AS, V35T, E36A, T39E, E40D, S48T, E53D, K122E, D123G, K173V, Q174R, V189I, T200V, Q207E, R211K, V245Q, D250E, A272P, K277R, E291D, V292I, I293V	C
	300530	CP076300530	HM119946	None	None			V35M, T39AS, E40D, S48T, D76X, K122E, D123N, Q145C, K173T, Q174K, T200A, Q207E, R211K, V245EQ, E248EDKN, A272P, V292T, I293V, K311R	C
	300558	CP076300558	HM119967	None	None			T27S, V35T, E36A, T39E, E40D, S48T, K49KR, E53D, K122E, D123G, Q145H, S162H, K173A, Q174QK, D177DE, I178IV, T200A, Q207DE, R211RK, V245Q, A272P, K277R, E291D, V292I, I293V, V317VA	C
	300560	CP076300560	HM119968	None	None			V35T, E36A, T39E, E40D, S48T, K122E, D123N, K173IR, Q174K, D177E, I178IM, T200A, Q207G, R211K, F214FL, P243PT, V245Q, D250E, A272P, K275Q, K277R, L279I, T286A, E291D, V292I, I293V, E312T	C
	300593	CP076300593	HM119994	None	None			V35T, E36A, T39E, E40D, S48T, T69TS, V118I, K122E, D123N, I135R, K173A, Q174KN, D177DE, G196K, T200A, Q207D, R211K, F214L, V245Q, E248D, E291D, V292I, I293V, P294T, D320G, D324E, L325I, I326T, E328K	C
	300597	CP076300597	HM119998	None	None			V35T, E36A, T39E, E40D, S48T, V60I, K122E, D123DN, K173T, D177E, I178M, T200A, E204K, Q207E, R211K, K238KR, V245Q, D250DE, A272S, E291D, V292I, I293V, E297EAPQ, H315Y, S322A	C
	300608	CP076300608	HM120009	None	None			E6Q, K20R, V35T, T39E, E40D, S48T, K122E, D123DG, K173A, D177DG, T200A, Q207E, R211K, V245Q, A272P, K277S, Q278K, T286A, E291D, V292I, I293V, V317A	C
	300610	CP076300610	HM120011	None	None		V179D	K20R, V35T, E36A, T39E, E40D, K122E, D123S, I135T, K166R, K173T, D177E, T200A, Q207E, R211K, F214L, K238KR, V245Q, K277R, T286A, E291D, V292I, I293IM, P313T, V317A	C
	300627	CP076300627	HM120026	None	None			V35T, E36A, T39E, E40D, S48T, K122E, D123G, E138AG, K173AT, Q174K, T200A, I202V, Q207DEKN, R211RK, P243T, V245H, E248EDKN, K249KQR, A272P, K277KR, T286TA, E291D, V292VI, I293V, V317A, E328K	C
	300640	CP076300640	HM120037	None	None		V179D	K20R, V35T, E36A, T39E, E40D, K122E, D123N, E138A, K173T, Q174K, T200A, Q207E, R211K, F214L, V245Q, E248D, A272P, K277R, T286A, E291D, V292I, I293V	C
	300645	CP076300645	HM120041	None	None			V35T, T39A, E40D, S48T, K122E, D123S, K173A, D177E, T200A, Q207E, K275KQ, K281R, T286A, E291D, V292I, I293V	C
	300677	CP076300677	HM120066	None	None			V35T, E36A, T39E, E40D, S48T, V60I, K122E, D123S, K173T, Q174K, L193F, T200A, Q207E, V245Q, E248Q, D250E, A272P, K277R, T286A, E291D, V292I, I293V	C
	300692	CP076300692	HM120077	None	None			V35T, E36A, T39E, E40D, S48T, E89K, K122E, K173A, Q174K, D177E, T200A, Q207E, R211K, V245Q, A272P, K277R, E291D, V292I, I293V, K311R	C
	300693	CP076300693	HM120078	None	None			V35T, E36A, T39E, E40D, S48T, V60I, K102R, K122E, D123N, E138A, K173T, Q174KR, T200AE, Q207D, R211K, V245VELQ, D250DE, S251D, A272P, L279M, T286A, E291D, V292I, I293V	C
	302365	CP076302365	HM120089	None	None			V8VI, K32R, V35T, T39N, E40D, V60I, D121H, K122E, K173A, Q174QR, D177E, T200A, Q207AEKT, R211RK, V245Q, R284K, T286A, E291D, I293V, P294A, L295M, I326IV, I329IN, Q330R	C
	302436	CP076302436	HM120123	None	None			K20KR, V35T, E36A, T39E, E40D, S48T, V60I, K122E, D123S, S162SCNY, K166KR, K173A, Q174N, D177E, I178L, I195IL, T200A, Q207E, R211K, P243T, V245Q, A272P, K277R, E291D, V292I, I293V, V317A	C
	302441	CP076302441	HM120127	None	None			V35T, E36A, T39E, E40D, S48ST, K49R, K122KE, D123DG, I135IT, K173A, D177E, V179VI, T200A, Q207D, R211K, V245Q, A272S, E291D, V292I, I293V, E328D	C
	302462	CP076302462	HM120135	None	None			E6EG, K20KR, K30KE, V35T, E36A, T39E, E40D, S48T, V60I, K122E, D123E, I142V, K173T, Q174K, D177E, T200A, I202V, Q207E, V245T, D250E, S251SN, A272P, T286A, E291D, V292I, I293V, D324E	C
Papathanasopoulos (2010)	17462	07ZA17462	GU253428	None	None			K20KR, T27S, V35T, E36A, T39E, E40D, S48T, K122E, D123N, I135T, S162C, K166KR, K173AT, Q174K, D177E, L187LF, T200A, I202V, R211K, V245Q, D250E, K277R, T286A, E291D, V292I, I293V, P294T	C
	17657	07ZA17657	GU253423	None	None		K103KN	V35T, E36A, T39E, E40D, K122E, D123N, A158S, S162A, K173AT, D177E, T200A, Q207G, R211K, V245Q, E248N, A272P, K277R, T286A, A288AS, E291D, V292I	C
Yebra (2010)	296425	06SP0296425	FJ481653	None	None			T39E, E40D, S48T, K122E, K173T, D177E, T200A, Q207E, R211K, V245Q	C
Bussmann (2011)	B0540	B0540	JQ616986	None	None			T27S, V35T, E36A, T39E, E40D, S48T, K122E, S162C, K173A, D177E, T200A, Q207D, R211K, V245Q	C
	B0679	B0679	JQ616990	None	None			V35T, E36A, T39E, E40D, S48T, K122E, D123N, E138A, K173T, Q174KR, G196E, T200A, Q207E, F214L	C
	B0681	B0681	JQ616991	None	None			V35T, E36A, T39E, E40D, S48T, K122E, D123N, E138A, K173T, Q174KR, G196E, T200A, Q207E, F214L	C
	B0682	B0682	JQ616992	None	None			V35IT, E36A, T39D, E40D, S48T, K122E, D123G, A158S, K173A, Q174K, D177E, T200A, Q207E, V245K, D250E	C
	B0703	B0703	JQ617003	None	None			V35MT, E36A, T39E, E40D, S48T, V60I, S68G, K122E, D123N, K173A, D177E, I178L, T200A, Q207E, V245Q	C
	B0741	B0741	JQ617021	None	None			V35T, E36A, T39E, E40D, S48T, K122E, D123G, K173A, Q174K, T200A, Q207E, R211K	C
	B0757	B0757	JQ617030	None	None			V35T, T39E, E40D, S48T, K122E, D123N, I135T, S162C, K173A, D177E, I178L, T200A, Q207E, R211K, F214L, V245Q, E248EK	C
	B0549	B0549	JQ617031	None	None			K20R, V35T, E36A, T39E, E40D, S48T, V118I, K122E, E138A, T139A, K173T, Q174K, T200A, Q207E, R211K, F214L, V245M, D250E	C
	B0768	B0768	JQ617035	None	None			V35T, E36A, T39E, E40D, S48T, K122E, D123N, A158S, K173V, Q174K, D177E, I178M, G196E, T200A, Q207E, V245Q, D250E	C
	B0578	B0578	JQ617071	None	None			V35T, E36A, T39E, E40D, S48T, K122E, D123N, I135V, T165I, K173I, Q174K, I195T, T200A, Q207E, R211K, F214L, V245E	C
	B0622	B0622	JQ617105	None	None			V35T, E36A, T39E, E40D, S48T, K122E, D123N, K173A, Q174K, D177E, T200A, Q207D, R211K, V245K	C
	B0652	B0652	JQ617117	None	None			V35T, T39E, E40D, S48T, K122E, D123G, K173T, D177E, G196K, T200E, I202V, Q207V, R211K, V245K	C
	B0663	B0663	JQ617123	None	None			V35T, E36A, T39E, E40D, K43R, S48T, K122E, D123G, I135V, I142V, K173A, D177G, T200A, I202V, Q207K, V245Q, D250E	C
	B0665	B0665	JQ617124	None	None			V35T, E36A, T39E, E40D, S48T, V118I, K122E, D123N, E138A, T139V, I142T, S162C, K166R, K173T, T200A, Q207E, R211K, F214L	C
	B0667	B0667	JQ617125	None	None		V179E	V35T, E36A, T39E, E40D, D123E, A158S, K173T, Q174K, I180L, G196M, T200A, Q207E, R211K, P243T, V245K, D250E	C
	B0678	B0678	JQ617129	None	None			V35T, E36A, T39E, E40D, S48T, K122E, D123S, K173A, Q174K, D177E, T200A, Q207E, R211K, P243T, V245Q, E248T	C
Carvalho (2011)	O32-43	O32-43	GU214076	None	None			V35T, E36A, T39E, E40D, S48T, K122E, I135T, K173T, D177E, T200A, Q207E, R211K	C
	O04-83	O04-83	GU214085	None	None			V8I, V35T, T39E, E40D, K43R, S48T, V60I, K122E, D123S, I135M, K173A, D177E, T200V, Q207G, R211K, V245Q	C
Graf (2011)	SC42	SC42	JF774008	None	None			K20R, V35T, T39E, E40D, K43R, S48T, K122E, D123N, I135R, K173T, Q174R, D177E, T200A, I202V, Q207E, R211K, V245Q, A272P, K277R, T286A, E291D, V292I	C
	SC121	SC121	JF774049	None	None			V35T, E36A, T39E, E40D, S48T, K122E, A158S, K173T, D177E, Q207K, R211K, V245Q, A272P, K277R, T286A, E291D, V292I, I293V	C
	SC126	SC126	JF774050	None	None			V35T, E36A, T39E, E40D, K43R, S48T, V60I, D121H, K122E, D123S, I142V, K173T, D177E, T200A, Q207E, R211K, V245Q, P247A, E248R	C
	SC127	SC127	JF774051	None	None			V35M, E36A, T39E, E40D, K43R, S48T, V118I, K122E, I135T, I142T, A158S, T165I, K173T, T200A, Q207E, R211K, F214L, H235N, V245Q	C
	SC140	SC140	JF774059	None	None			K20R, V35T, E36A, T39E, E40D, K122E, D123N, K173T, Q174K, D177E, T200A, I202V, Q207E, R211K, V245Q, A272P, K277R, T286A, E291D, V292I	C
	SC143	SC143	JF774062	None	None			V8I, K30Q, V35M, E36A, T39E, E40D, S48T, D86V, G93W, K122E, D123N, A158S, K173A, D177E, T200A, Q207K, L210M, R211K, M230K, V245Q, A272P, E291D, V292I, I293V	C
Hamers (2011)	CP076301576	CP076301576	HQ993615	None	None			V35T, E36Q, E40D, K49R, V60I, K122E, D123DG, A158S, I159V, K173A, D177E, I202V, Q207A, R211K, V245Q, A272P, T286A, A288S, E291D, V292I, I293V, E297K	C
	CP076301594	CP076301594	HQ993632	None	None			V35T, E36A, T39E, E40D, D121DE, K122KE, D123S, D177E, T200A, Q207E, V245Q, E248T, A272P, K275Q, K277R, T286A, E291D, V292I, I293IV, P294T, L295M, V317A, D324E	C
	CP076301617	CP076301617	HQ993653	None	None			V35T, E36Q, E40D, K49R, V60I, K122E, D123N, A158S, I159V, K173A, D177E, I202IV, Q207A, R211K, V245Q, P247Q, A272P, T286A, E291D, V292I, I293V, E297EK	C
	CP076301682	CP076301682	HQ993678	None	None			V35T, E36A, T39E, E40D, K43R, S48T, K49R, V60I, K122E, D123S, A158S, K173T, Q174K, D177E, T200A, Q207E, R211K, V245Q, A272P, K275R, K277R, T286A, E291D, V292I, I293V	C
	CP076301739	CP076301739	HQ993729	None	None			V35T, E36A, T39E, E40D, S48T, K122E, D123N, A158S, K173T, Q174K, D177E, T200A, Q207D, R211K, A272P, I274V, Q278N, T286A, E291D, V292I, I293V, L301F	C
	CP076302302	CP076302302	HQ993849	None	None			V35T, E36A, T39E, E40D, S48T, K49R, E53D, V60I, D121H, K122E, A158S, E169D, K173T, Q174K, D177E, G196E, T200A, Q207E, R211K, V245Q, A272P, K281R, R284K, T286A, E291D, I293IV, K311R, D324E	C
	CP076304247	CP076304247	HQ993937	None	None			V35T, E36A, T39E, E40D, S48T, K122E, D123N, A158S, K173T, Q174K, D177E, T200A, Q207E, R211K, V245Q, D250E, A272P, K277R, L283I, T286A, E291D, V292I, I293V	C
	CP076304277	CP076304277	HQ993963	None	None			V35T, E36A, T39E, E40D, S48T, K49R, K122E, D123S, E169K, K173T, D177E, T200A, Q207E, V245Q, D250DE, K277R, T286A, E291D, V292I, I293V	C
	CP076305182	CP076305182	HQ994129	None	None			V35T, E36A, T39E, E40D, S48T, K104R, V111VI, D121Y, K122KE, I135T, T165I, K173A, Q174K, D177E, T200A, Q207EG, R211K, F214L, V245Q, E248D, D250E, S251D, A272P, T286TA, E291D, V292I, I293V	C
	CP076303149	CP076303149	HQ994171	None	None			V35T, T39A, E40D, S48T, K122E, D123G, K173AT, D177E, T200A, Q207E, R211K, V245Q, A272P, I274V, K275Q, V276T, Q278K, E291D, V292I, I293V, K311R	C
	CP076303159	CP076303159	HQ994178	None	None			V35T, E36EA, T39E, E40D, S48T, V60VI, K166KR, K173AT, D177E, G196GE, T200A, Q207E, R211K, V245Q, A272P, K277R, T286A, A288AS, E291D, I293V	C
	CP076303170	CP076303170	HQ994188	None	None			V35T, E36A, T39E, E40D, V60I, K122E, D123S, K173A, Q174K, D177E, Q207E, R211K, F214L, V245Q, A272P, T286A, E291D, V292I, I293V, E297K, L310V, V314A, V317L, D320S, S322A, K323T, D324P, L325M, I326T, A327X, I329V, K331R	C
	CP076303187	CP076303187	HQ994201	None	None			V35T, E36A, T39E, E40D, S48T, K122E, D123N, K173A, Q174K, D177E, G196E, T200A, Q207E, R211K, V245Q, K277KR, E291D, V292I, I293V, L325X	C
	CP076303201	CP076303201	HQ994212	None	None			V35T, E36A, T39E, E40D, S48T, K122E, D123N, K173A, Q174K, D177E, G196E, T200A, Q207E, R211RK, V245Q, A272AG, K277KR, E291D, V292I, I293V	C
	CP076303250	CP076303250	HQ994247	None	None			V35T, E36A, T39E, E40D, S48T, V60VI, K122E, D123S, K173A, Q174K, D177E, T200A, Q207E, R211K, V245Q, E248ED, A272P, K281R, E291D, V292I, I293V, D324E	C
	CP076303283	CP076303283	HQ994272	None	None			V8VI, E28K, K32E, V35M, E36A, T39E, E40D, S48T, K122E, D123DG, K173T, Q174K, T200E, Q207E, R211K, F214L, V245Q, E248EV, D250DN, S251SDGN, A272P, K275R, E291D, V292I, I293V, E328K	C
	CP076305030	CP076305030	HQ994276	None	None			K20R, V35T, E36A, T39E, E40D, S48T, K122E, D123N, E138A, K173T, Q174KR, V179I, T200A, Q207E, R211K, F214L, V245Q, E248N, D250E, A272P, K275R, Q278F, T286A, E291D, V292I, I293V, E305F, V314A	C
	CP076305048	CP076305048	HQ994288	None	None			K20KR, V21VI, V35T, E36A, T39E, E40D, S48T, V60I, A98S, K101Q, K122E, D123S, E138A, S163T, T165I, K173AT, D177EG, T200A, Q207A, R211RK, V245Q, Y271F, A272P, K275R, Q278HN, K281KR, E291D, V292I, I293X, P294~	C
	CP076305072	CP076305072	HQ994306	None	None			V8VI, V35T, E36A, T39E, E40D, S48T, K122E, D123N, K173A, D177E, T200A, Q207E, R211RK, V245Q, A272P, K277R, T286A, E291D, V292I, I293V, V317A	C
	CP076305108	CP076305108	HQ994332	None	None			V35T, E36A, T39E, E40D, S48T, E138EG, Q145E, E169D, K173T, Q174K, T200A, I202IV, Q207D, R211K, V245Q, D250E, A272P, Q278H, T286A, A288S, V292VI, I293V, K311R, I329V	C
	CP076305115	CP076305115	HQ994338	None	None			V35T, E36A, T39E, E40D, S48T, Q145E, E169D, K173T, Q174K, T200A, I202V, Q207D, R211K, V245Q, D250E, A272P, Q278H, T286A, A288S, I293V, K311KR, E328K	C
	CP076305117	CP076305117	HQ994339	None	None			K20R, V35T, E36A, T39E, E40D, S48T, K122E, D123N, E138A, T139A, K173T, Q174R, V179I, T200A, Q207E, R211K, F214L, V245Q, E248N, D250E, A272P, K275R, Q278S, T286A, E291D, V292I, I293V	C
	CP076300311	CP076300311	HQ994359	None	None			V35T, E36A, T39E, E40D, S48T, V60I, K122E, D123GS, I135T, K173A, Q174K, D177E, T200A, Q207K, R211KQ, V245Q, A272P, K275R, K277R, T286A, E291D, V292I, I293V	C
	CP076301455	CP076301455	HQ994425	None	None		Y318F	V35T, E36A, T39E, E40D, S48ST, K102KR, K122A, K166R, K173I, Q174K, D177E, V179I, G196GE, T200A, Q207E, R211K, V245QR, A272P, K275R, K277R, Q278N, L283I, E291D, V292I, I293V, E308H, E312ED	C
	CP076301478	CP076301478	HQ994441	None	None			V35T, E36A, T39E, E40D, S48T, V90VI, K122E, D123E, K173A, Q174K, D177E, T200A, Q207E, R211RK, V245N, E248D, A272P, E291D, V292VI, I293IV	C
	CP076301525	CP076301525	HQ994470	None	None			V35T, T39A, E40D, S48T, I63X, K122E, D123N, I135T, E138A, S162C, K173A, Q174K, D177E, T200A, Q207QEGR, R211K, F214L, V245Q, A272P, K277R, E291D, V292I, I293V	C
	CP076302114	CP076302114	HQ994487	None	None			E6D, V35T, E36A, T39E, E40D, K122E, D123N, K173AT, Q197K, T200A, Q207E, F214L, V245Q, A272P, Q278NY, T286A, E291D, V292I, I293V, E297EK, L310F, K311R	C
	CP076302118	CP076302118	HQ994489	None	None			K20R, V35T, E36A, T39E, E40D, S48T, V60I, K122E, D123G, T165I, K173A, Q174K, D177E, I178L, T200A, Q207E, R211K, F214L, V245Q, A272Q, T286V, V292I, I293V, E312K, V317A, D324E	C
	CP076302126	CP076302126	HQ994496	None	None			V35T, E36EA, T39E, E40D, S48ST, V60VI, K122E, D123S, T165TI, K173AE, T200A, Q207E, R211K, V245Q, A272P, K277R, T286A, E291D, V292I, I293V, K311R	C
	CP076301001	CP076301001	HQ994563	None	None			V35M, E40D, S48T, A98S, K122E, D123G, K173T, D177G, T200A, Q207EG, R211K, V245Q, A272P, K277R, T286A, V292I, I293V, L310X, P321A, S322A	C
	CP763A03683	CP763A03683	HQ994695	None	None			V35T, E36A, T39E, E40D, K43KR, S48T, V90I, K122E, T139A, A158S, S162SC, E169ED, K173T, Q174K, D177E, V179I, G196E, T200A, I202V, Q207E, R211RK, V245Q, A272P, K277R, E291D, V292I, I293V	C
	CP076300976	CP076300976	HQ994739	None	None			K32KR, V35T, E36A, T39E, E40D, S48T, V60I, K122E, D123G, S162CFY, K173A, Q174K, D177DE, I178IL, T200A, Q207A, K238KR, V245Q, A272P, K275QR, Q278H, E291D, V292I, I293V	C
	CP076302643	CP076302643	HQ994790	None	None			V35T, E36EA, T39E, E40D, S48T, K122E, D123S, E138A, K173T, Q174K, T200A, R211K, F214L, V245Q, A272P, K277R, T286A, E291D, V292I, I293V, D324DE	C
	CP076302663	CP076302663	HQ994806	None	None		V179D	V35T, T39N, E40D, S48T, E53ED, V60I, K64R, K173A, Q174K, D177E, I195IL, G196E, T200A, Q207A, R211K, F214L, V245Q, A272P, K277R, T286A, E291D, V292I	C
	CP076302673	CP076302673	HQ994815	None	None			V35T, E36EA, T39E, E40D, S48T, D123E, K173T, Q174K, D177E, T200A, Q207AE, R211A, V245Q, E248T, A272P, K277R, E291D, V292I, I293V, D324DE	C
	CP076302712	CP076302712	HQ994849	None	None			V8VI, V35T, T39E, E40D, S48T, V60I, K122E, D123N, K173T, Q174K, T200A, Q207E, R211K, V245Q, E248DN, D250E, A272P, K277R, T286A, E291D, V292I, I293V, L310I	C
	CP763A03354	CP763A03354	HQ994893	None	None			V35T, E36A, T39E, E40D, S48T, V60I, K122E, D123G, K173T, Q174K, T200A, Q207E, V245Q, A272P, T286A, E291D, V292I, I293V, P294T	C
	CP763A03365	CP763A03365	HQ994902	None	None			V8G, P9Q, V21D, L26S, V35T, E36A, T39E, E40D, S48T, K122P, D123S, E138A, T139A, K173T, V179A, T200A, I202IV, Q207A, R211K, F214L, V245Q, E248N, D250DE, A272P, K277R, T286TA, E291D, V292I, I293V, P313Q, S322E	C
	CP076300801	CP076300801	HQ994940	None	None			K32R, V35T, E36A, T39E, E40D, S48T, K122E, D123DG, E138A, K173Q, T200A, Q207AE, R211RK, F214FL, V245Q, A272P, K277R, T286TA, E291D, V292I, I293V	C
	CP076303013	CP076303013	HQ995078	None	None			V35T, E36A, T39E, E40D, K122E, D123G, K173L, T200A, Q207E, V245K, D250E, I257L, A272P, K277R, L282C, E297A	C
	CP076303071	CP076303071	HQ995251	None	None			V35T, E36A, T39E, E40D, K173A, D177E, V179I, T200A, I202V, Q207EK, V245K, D250E, A272S, K277R, K281R, L282C, L283I, T286A, I293V, P294T	C
	CP076302913	CP076302913	HQ995477	None	None			V35T, E36A, T39E, E40D, K43R, K49R, K122E, D123G, A158S, K173T, D177E, I178M, T200A, Q207G, R211K, V245Q, K281R, T286A, E291D, V292I, I293V	C
	CP076302466	CP076302466	HQ995494	None	None			V35T, E36A, T39E, E40D, S48T, K102E, K122E, S162SCNY, T165TI, K173KT, Q174EK, T200A, I202IV, Q207AE, R211K, V245Q, A272P, K277R, L283I, E291ED, V292I, I293V, K311KR, V317VA	C
Kasang (2011)	32641	32641	HM572399	None	None			V35AT, E36AT, T39E, E40D, S48T, K49KR, K122E, D123N, A158S, K173A, D177E, T200A, Q207N, R211K, V245Q, A272P, K277R, L283I, V292I, I293V	C
	3319	3319	HM572401	None	None			V35T, E36EA, T39E, E40D, K43KR, S48T, W88W*, E89EK, K122E, D123DN, A158S, K173AT, Q174K, D177E, T200A, Q207E, L228Q, E233EK, V245VEKM, A272P, G273GE, K277R, T286A, E291D, V292I, I293IV, E298EK, Q334E	C
	6018	6018	HM572405	None	None			V35AT, E36A, T39E, E40D, E42ED, V60VI, F61FL, K64KIN, R83RIM, K122E, D123N, A158S, K173T, Q174K, D177E, I178M, T200AV, Q207E, R211K, F214L, P243A, V245Q, A272P, K277KR, T286A, E291D, V292I, I293V, K311KR, V317A	C
	29746	29746	HM572406	None	None			K22R, V35T, E36A, T39E, E40D, S48T, W88W*CY, K122E, D123N, I159IL, K173A, D177E, R199K, T200A, Q207E, F214L, V245E, E248D, A272P, T286A, E291D, V292I, I293V, V317A	C
	29742	29742	HM572410	None	None			E6K, V35T, E36A, T39E, E40D, K49R, D113DG, D121E, K122E, D123S, A158S, K166R, K173A, D177E, T200A, Q207E, V245K, T286A, E291D, V292I, I293V, I326V	C
	32647	32647	HM572411	None	None		A98G	T27S, V35T, E36A, T39E, E40D, S48T, K122E, D123G, I135T, S163T, K173T, D177E, T200A, E204EK, Q207EK, R211T, F214L, E248Q, A272P, K275R, Q278H, T286A, E291D, V292I, I293V, I329L	C
	32651	32651	HM572417	None	None			K20KR, V35T, T39E, E40D, S48T, V60I, K122E, D123N, I135L, I142T, K173A, Q174K, I178M, T200A, Q207D, V245Q, D250E, A272P, K277R, E291D, V292I, I293V, K311R, D324E	C
Manasa (2011)	1001428	1001428	JN664979	None	None			K20R, V35T, E36A, T39E, E40D, S48T, K122E, D123G, E138Q, T139V, S162C, K173A, T200A, Q207G, R211K, F214L, V245Q, A272S, K277R, E291D, V292I, I293V	C
	1001440	1001440	JN664980	None	None			V35T, E36A, T39E, E40D, S48T, V60I, K122E, D123S, I135R, S162C, K173A, D177E, V179I, G196E, T200A, E204K, Q207E, R211A, V245Q, A272P, Q278H, K281R, T286A, E291D, V292I, I293V	C
	1001552	1001552	JN664985	None	None			V35T, T39E, E40D, S48T, V60I, S68G, K102Q, K122E, D123G, K173A, D177E, I178L, T200A, Q207G, R211K, V245Q, A272P, K281R, T286A, E291D, V292I, I293V	C
	1002972	1002972	JN664998	None	None			V35T, T39K, E40D, S48T, K103R, K122E, D123S, I135T, S162C, K173A, T200A, Q207E, R211K, V245Q, K277R, T286A, E291D, V292I, I293V	C
	1009139	1009139	JN665032	None	None			V35T, T39E, E40D, S48T, K122E, D123S, S162C, K173A, D177E, T200A, Q207N, R211K, V245K, A272P, K275Q, V276T, K277R, Q278Y, E291D, V292I, I293V	C
	1012654	1012654	JN665041	None	None			V21I, V35T, E36A, T39E, E40D, S48T, V60I, K122E, D123G, T165I, K173A, D177E, T200A, Q207A, R211K, V245T, E291D, V292I, I293V	C
Ndembi (2011)	NTCPS710	NTCPS710	HQ702660	None	None			E6D, I31V, V35T, C38H, T39I, E40D, E44K, K49R, V60I, K122E, D123S, I135T, A158S, K173T, Q174K, D177E, T200V, Q207E, R211K	C
	NTCPS708	NTCPS708	HQ702662	None	None			P4S, V35T, E36A, T39E, E40D, K43R, S48T, V60I, N137Y, I142N, Q145K, N147T, A158S, Q161N, K166R, I167V, K173S, P176S, T200A, Q207E, R211K	C
Nwobegahay (2011)	08MB03ZA	08MB03ZA	GU188754	None	None			K20R, V35T, T39E, E40D, V118I, K122E, D123N, I135R, K173A, D177E, G196R, T200A, Q207K, R211K, F214L, V245K, D250E, K275R, T286A, E291D, V292I, I293V	C
	08MB59ZA	08MB59ZA	GU188791	None	None			V35T, E36A, T39E, E40D, S48T, K122E, D123N, K173A, D177G, V179I, T200A, Q207E, R211K, V245Q, K277R, T286A, E291D, V292I	C
Parboosing (2011)	Pat055	HRR22	HQ844571	None	None			V35T, T39K, E40D, S48T, V60I, K122E, D123DGNS, K173V, Q174K, D177E, T200A, Q207D, R211K, V245Q, E248D, A272P, K277R, T286A, E291D, V292I, I293V, P294PQ, K311R	C
	Pat021	HRS161	HQ844605	None	None			V35T, T39E, E40D, S48T, V60I, D123E, I135V, S162C, K173A, D177E, T200A, Q207E, V245E, A272P, K277R, T286A, E291D, V292I, I293V, P294Q, E297K, L310I	C
	Pat010	HRS205	HQ844616	None	None			K20R, V35T, T39E, E40D, S48T, E53D, K122E, D123S, I135T, S162W, K173A, Q174K, D177E, I178V, T200A, Q207A, R211RK, V245Q, D250T, A272P, K277R, T286A, E291D, V292I, I293V	C
Santos (2011)	J95	J95_PR_RT	JN010466	None	None			V35T, E36A, T39E, E40D, K43R, S48T, K122E, D123N, S162C, K173A, Q174K, T200A, Q207E	C
Su (2011)	GXNN2514	GXNN2514	HQ588277	None	None			V35T, E36A, T39E, E40D, S48T, K122E, D123E, I135T, S162C, K173A, D177E, T200E, E203Q, Q207D, R211K, V245Q, K249Q, S251I, A272P	C
Tshabalala (2011)	SCR020	SCR020	HQ874283	None	None			V35T, E36A, T39E, E40D, K173T, Q174QK, D177DE, I178IM, T200A, Q207E	C
	SCR086	SCR086	HQ874292	None	None			V35T, E36A, T39E, E40D, S48T, K122E, D123N, E138Q, T139A, T165I, K173T, Q174K, D177E, I178L, G196E, T200A, Q207E, F214L	C
	SCR097	SCR097	HQ874296	None	None			V35M, E36A, T39E, E40D, S48T, K122E, D123S, K173A, Q174E, D177E, T200A, Q207E, R211K	C
	SCR101	SCR101	HQ874298	None	None			V35T, E36A, T39E, E40D, S48T, V60I, D121Y, K122E, D123N, K173V, Q174K, D177E, T200A, Q207D, R211K	C
	SCR299	SCR299	HQ874326	None	None			V35T, E36A, T39E, E40D, S48T, D121Y, K122E, D123E	C
	SCR314	SCR314	HQ874334	None	None			V35T, E36A, T39E, E40D, S48T, K122E, E138A, S162C, K173A, T200A, Q207E	C
	SCR370	SCR370	HQ874336	None	None			V35T, E36A, T39E, E40D, S48T, D123E, S162C, K173A, D177E, T200A, Q207E, R211K	C
	SCR409	SCR409	HQ874367	None	None			V35T, E36A, T39E, E40D, S48T, D123S, K173A, D177E, T200A, Q207E	C
	SCR417	SCR417	HQ874375	None	None			V35T, E36A, T39E, E40D, S48T, K122E, D123N, I142V, K173A, Q174K, D177E, T200A, Q207E	C
	SCR423	SCR423	HQ874379	None	None			K20R, V35T, E36A, T39E, E40D, K43R, S48T, V60I, K122E, D123G, K173T, D177G, T200A, Q207E	C
	SCR429	SCR429	HQ874381	None	None			V35T, E36A, T39E, E40D, S48T, K122E, D123S, K173T, Q174K, D177E, V179I, T200A, Q207E, R211K	C
	SCR512	SCR512	HQ874391	None	None			K20R, V35T, E36A, T39E, E40D, S48T, W88C, D123E, E138A, S162Y, E169Q, K173IM, Q174K, D177E, T200A, Q207E, F214L	C
	SCR577	SCR577	HQ874401	None	None			V35T, E36A, T39E, E40D, S48T, K122E, D123G, T165I, K173T, Q174K, T200A, Q207K, R211K	C
	SCR754	SCR754	HQ874409	None	None			V35T, E36A, T39E, E40D, S48T, K122E, D123N, A158S, S162A, K166R, K173A, Q174N, D177E, T200A, Q207E, R211K	C
	SCR810	SCR810	HQ874421	None	None			V35T, E36A, T39E, E40D, S48T, E53D, K122E, E138A, K173A, Q174K, T200A, Q207E, R211K, F214L	C
	SCR815	SCR815	HQ874425	None	None			V35T, T39E, E40D, S48T, V60I, K122E, K166R, K173A, D177E, T200E, Q207E, R211K	C
	SCR821	SCR821	HQ874427	None	None			P4S, D17DG, K20R, V35T, E36A, T39E, E40D, S48T, K122E, D123G, E138A, K173A, D177G, T200A, Q207EG, R211K	C
Ye (2011)	BJ07839	BJ07839	JF906698	None	None		K103N	V8I, V35T, E36A, T39E, E40D, S48T, K173A, D177E, T200A, Q207D, R211K, V245Q, A272P, E291D, V292I, I293V, P294A	C
Ye (2011)	CNBJ279	CNBJ279	HQ007318	None	None			V35I, T39N, E40D, S48T, V60I, V111I, D121H, K122E, I135T, K166R, Q207E, R211K, V245K	C
Ajoge (2012)	H58	HR58	HM854152	None	None			V35T, E36A, T39E, E40D, S48T, D123S, K173T, Q174R, I178L, V179I, T200A, Q207E, R211K, V245Q, A272P, Q278N, T286A, E291D, V292I, I293V, K311R, Q334N, G335D, R356K, M357K, G359A, A376T, T377M, K390R, A400T, E404D, V417I, Y427C, E432D, V435I	C
Akrim (2012)	N319CC	N319CC	JQ344194	None	None			V35T, E36A, T39E, E40D, K49R, I50V, V60I, K104R, K122E, D123G, I135T, K166R, K173T, D177E, T200A, Q207E, R211K	C
	N220BC	N220BC	JQ344196	None	None			V35T, E36A, T39E, E40D, K49R, I50V, V60I, K104R, K122E, D123G, I135T, K166R, K173T, D177E, T200A, Q207E, R211K	C
Brehm (2012)	02ZA	02ZA.0	JN601893	None	None			V35T, E36A, T39E, E40D, K43R, S48T, K122E, D123DGNS, K173A, D177E, G196K, T200A, Q207E, R211K, V245Q, A272Q, K277KR, T286A, E291D, V292I, I293V, K311R, E312EDKN, Q334H, G335D, R356K, G359T, K366R, Q373QH, T377M, K390R, A400T, E404D, V435A, L452T, R461K, V466I, S468T, T470N, D471E, T477A, H483Q, L491S, S519N, K527N, K530R, V531I, A534S, V548I, A554NS	C
	17ZA	17ZA.0	JN601928	None	None			E6D, V8I, K20R, V21I, V35T, T39E, E40D, K122E, D123N, I135T, I159IV, S162SC, K173T, E194DN, T200A, Q207E, R211K, A272P, L279T, T286A, E291D, V292I, I293V, V317A, I329V, Q334H, G335D, R356K, G359T, T369A, A371T, T377L, K390R, A400T, E404D, V435A, G436GE, N447S, V466I, T470N, D471E, T477A, H483Q, L491S, S519N, K527N, E529D, K530R, V531I, A534S, A554S	C
	33ZA	33ZA.0	JN601964	None	None			K20R, V35T, T39A, E40D, K122E, D123S, I135R, S162C, K173A, T200A, Q207AE, R211K, F214L, V245Q, E248D, D250E, A272P, K277R, T286A, E291D, V292I, I293V, V317A, Q334H, G335D, R356K, G359T, T377L, K390R, A400T, E404D, E432D, V435A, A445AG, E449ED, K465KR, V466I, V467VI, T470P, D471E, T477A, Q480H, H483Q, L491PS, S519N, K527N, K530R, V531I, A534S, A554K	C
	39ZA	39ZA.0	JN601977	None	None			V35T, E36A, T39E, E40D, S48T, K122E, D123S, K173A, Q174K, D177E, T200A, Q207KN, R211RM, V245Q, A272P, K277R, T286A, E291D, V292I, I293V, K311R, Q334H, G335D, R356K, G359T, T377S, K390R, A400T, E404D, V435A, A437V, N447S, E449D, L452V, V467I, S468T, L469I, T470S, D471E, H483Q, L491PS, E492EK, S519N, K530KR, A534S, A554S	C
da Silveira (2012)	BRMS09_10	BRMS09_10	JF342317	None	None			V8I, V35T, E36EA, T39E, E40D, K43KR, S48T, V60I, K122E, D123DN, I135L, S162C, K173A, Q174K, D177E, T200A, Q207A, R211K	C
Delwart (2012)	476-5214-5	476-5214-5	JN215115	None	None			V8VI, V35T, E36A, T39E, E40D, S48T, K104R, L120LS, D121H, K122E, I135T, T139A, K173T, D177E, T200A, Q207E, V245Q, A272P, K277R, T286A, E291D, V292I, I293V	C
Gaspareto (2012)	LASB29	LASB29TR	HM752211	None	None			K20R, V35T, E36A, T39E, E40D, S48T, K122E, K173A, D177E, T200A, Q207E, R211K	C
	LDD31	LDD31TR	HM752213	None	None			V35T, E36A, T39E, E40D, S48T, K173A, D177K, G196E, T200A, Q207E, R211K	C
	AO66	AO66TR	HM752234	None	None			V35T, E36A, T39E, E40D, S48T, K173A, D177E, T200A, Q207E, F214L	C
Hassan (2012)	RS09000896	RS09000896	HQ441641	None	None			V35M, E36AT, T39E, E40D, S48T, D121DH, K122KE, D123DGNS, A158S, K166R, K173A, D177E, T200A, Q207E, R211K, V245Q, I270V, K275Q, V276T, Q278N, K281R, T286A, E291D, V292I, I293V	C
	RS11000311	RS11000311	JQ698393	None	None			K32R, V35T, T39K, E40D, S48T, V118I, K122E, T131TP, R143RK, T165I, K173A, D177E, T200A, Q207E, R211K, F214L, V245Q, A272P, K277R, Q278H, T286A, E291D, V292I, I293V, E297D	C
Iweriebor (2012)	07V29ZA	07V29ZA	GU201762	None	None			V35T, T39E, E40D, S48T, K122E, D123G, K173T, D177E, I178L, T200A, Q207A, V245K, E248D, K277R, T286A, E291D, V292I, I293G, L295I, T296N	C
	07M19ZA	07M19ZA	GU201774	None	None			V35T, E36A, T39E, E40D, S48T, K122E, D123G, K166R, K173T, D177E, T200A, Q207E, R211K, F214L, V245Q, A272P, K277R, T286A, E291D, V292I	C
	07M20ZA	07M20ZA	GU201775	None	None			V35T, E36A, T39E, E40D, S48T, V60I, K122E, T139M, K173A, Q174K, I202V, Q207K, R211K, V245Q, E248N, A272P, Q278Y, K281R, T286A, E291D, V292I, I293V	C
Karlsson (2012)	SE_19	SE_19	JQ698679	None	None			K20R, V35T, E36A, T39E, E40D, K122E, D123S, T139A, I142V, K166R, K173AT, Q174N, D177E, T200A, Q207E, R211K, V245Q, D250V	C
	SE_29	SE_29	JQ698685	None	None			K20R, V35T, E36A, T39E, E40D, S48T, K122E, D123S, I135T, S162A, K166KR, K173A, G196K, Q197E, T200A, Q207E, V245Q	C
	SE_42	SE_42	JQ698695	None	None			V35T, T39E, E40D, S48T, K122E, D123S, I135T, K173A, D177E, T200A, I202V, Q207E, R211K, V245Q	C
	SE_86	SE_86	JQ698723	None	None		E138K	K20R, V35T, E36A, T39E, E40D, G45GR, S48T, W71W*, K122E, D123N, I135T, S162C, K173A, G196K, Q197L, T200A, I202V, Q207E, R211K, V245Q, E248D	C
	SE_116	SE_116	JQ698747	None	None			V35T, E36A, T39E, E40D, S48T, K122E, D123DN, I135T, K173A, G196KN, T200A, I202V, Q207E, R211K, V245Q, E248N	C
	SE_227	SE_227	JQ698827	None	None			V35T, E36A, T39E, E40D, K122E, D123S, A158S, K166R, K173A, D177E, G196E, T200A, E204V, V245Q	C
	SE_257	SE_257	JQ698845	None	None			V35T, E36A, T39E, E40D, K43R, K122E, D123G, A158S, K173T, D177E, I178M, T200A, Q207K, F214L, V245Q	C
Musyoki (2012)	DGM.21	DGM.21	JN176302	None	None			P4S, V35T, T39E, E40D, S48T, V60I, K122E, K173A, D177E, T200A, E204K, Q207D, R211K, V245Q, E248D, A272P, K277R, T286A, E291D, V292I, I293V, Q334D, G335D, R356K, M357R, G359T, T377Q, K390R, A400T, E404D, W414R	C
	DGM.20	DGM.20	JN176303	None	None			V35T, E36A, T39E, E40D, S48T, V60I, K122E, D123G, T165I, K173A, Q174K, T200A, Q207D, R211K, V245Q, A272P, V292I, I293V, K311R, D324E, G335D, R356K, M357R, G359T, T377S, K390R, A400L, E404D	C
Nwobegahay (2012)	BBCR19ZA	BBCR19ZA	GU177560	None	None			V35I, T39N, E40D, S48T, V60I, K122E, D123G, K173T, Q174K, D177G, G196E, T200A, Q207A, R211K, V245Q	C
	BBCR31ZA	BBCR31ZA	GU177568	None	None			V35T, T39E, E40D, S48T, W88C, K104R, V118I, K122E, D123N, E138A, K173A, Q174K, T200A, Q207E, R211K, F214L, E224K, P226R, V245Q, E248N, K277R, K281R, T286A, E291D, V292I, I293V, P313Q, E328D	C
	BBCR36ZA	BBCR36ZA	GU177570	None	None			V35T, E36A, T39E, E40D, S48T, V60I, K122E, D123G, K173T, Q174R, T200A, Q207A, R211K, E248D, T286A, E291D, V292I, I293V	C
	MC34ZA	MC34ZA	GU177610	None	None			D17E, K32R, V35T, E36A, T39E, E40D, S48T, V60I, K122E, D123S, T165I, K173A, D177E, T200A, Q207E, R211K, I244Y, V245K	C
Sigaloff (2012)	KEKSN418	KEKSN418	JN628479	None	None			E6D, I31V, V35T, T39I, E40D, K49R, V60I, K122E, D123G, I135T, K173V, D177E, T200A, Q207E, R211K	C
	KELKN220	KELKN220	JN628493	None	None			V35T, E36A, T39E, E40D, S48E, K49R, V60I, D123S, I135R, K173A, D177E, T200A, Q207E	C
	KELKN257	KELKN257	JN628518	None	None			E6D, E28K, V35T, E36A, T39V, E40D, K43R, K49R, K104R, K122E, D123S, K166R, K173A, D177E, I178V, Q197L, T200A, Q207E	C
Alencar (2013)	PE2-0050	PE2-0050	JQ238077	None	None			V35T, E36A, T39E, E40D, S48T, I135T, S162W, K166R, K173A, D177E, T200A, Q207E, R211K, F214L	C
	MG2-0040	MG2-0040	JQ238210	None	None			K32R, V35T, E36A, T39E, E40D, S48T, D121H, K122E, D123S, I135R, S162A, K173T, D177E, T200A, I202V, Q207E, R211K	C
Ferreira (2013)	BR09SP242	BR09SP242	HM534027	None	None		V179D	Q23Q*, T27TI, A33AV, V35IT, E36AV, T39E, E40D, K43R, S48T, K122E, D123S, I135IRT, T139TA, A158AS, K173T, Q174K, D177E, T200A, Q207E, R211K, F214L	C
	BR09SP262	BR09SP262	HM534030	None	None			P4PS, V35T, T39E, E40D, S48ST, D121H, K122E, E138A, K173I, Q174K, D177E, T200A, Q207G, R211K, F214L, V245Q	C
	BR09SP306	BR09SP306	HM534034	None	None			V35T, E36A, T39E, E40D, S48T, K104R, I135T, T165I, K173A, Q174R, D177K, E194Q, G196E, T200A, I202V, Q207E, R211K, F214L	C
	BR09SP373	BR09SP373	HM534197	None	None			V8VI, V35T, T39N, E40D, S48T, K122E, D123S, I135T, K173A, D177E, T200A, Q207E, R211K, V245Q, A272P, K277R, E291D, V292I, I293V, P294T, I329L, G335N	C
Frentz (2013)	EHR-02568	EHR-02568	JX299590	None	None			K20R, V35T, E36A, T39E, E40D, I142V, A158S, K173T, D177E, T200A, Q207E, R211K, V245Q	C
	EHR-04118	EHR-04118	JX299613	None	None			T39E, E40D, K49R, K122E, D123G, A158S, K173T, D177E, Q207E, R211RK, V245Q	C
	EHR-05127	EHR-05127	JX299628	None	None			V35T, T39E, E40D, S48T, K122E, D123S, I135T, K173A, D177E, T200A, I202V, Q207E, R211K, V245Q	C
	EHR-11466	EHR-11466	JX299723	None	None			V35T, E36A, T39E, E40D, S48T, K103R, K122E, D123G, K173A, T200L, Q207K, R211A, V245T	C
	EHR-41332	EHR-41332	JX300239	None	None			V35L, E36N, I37F, T39E, E40D, S48T, V60I, K122E, D123G, K173A, D177E, I178M, T200TA, E204K, Q207QE, R211KQ, V245Q	C
	EHR-42789	EHR-42789	JX300261	None	None			K22R, V35T, E36A, T39E, E40D, S48T, K49R, K122E, D123N, A158S, E169A, K173A, D177E, T200A, Q207E, W212WG, V245Q	C
	EHR-58959	EHR-58959	JX300526	None	None			K11KQ, V35T, T39E, E40D, L100X, D121X, K122E, D123GS, I135IM, A158AS, K173A, Q174K, D177E, G196GE, Q197QK, T200A, Q207E, R211K, V245Q	C
	EHR-71806	EHR-71806	JX300754	None	None			T39E, E40D, S48T, K49KR, A98AS, K122E, D123S, I135T, K173A, Q174K, D177E, T200A, Q207E, R211K, V245LQ	C
	EHR-759709	EHR-759709	JX300834	None	None			V35T, T39E, E40D, K43R, K122E, D123S, I135R, K173T, D177E, T200A, I202V, Q207EK, L210LF, R211K, V245Q	C
	EHR-77225	EHR-77225	JX300865	None	None			V21VI, K32R, V35T, E36A, T39E, E40D, S48T, K122E, D123G, E138A, K173A, T200E, Q207E, V245Q	C
	EHR-79197	EHR-79197	JX300897	None	None			K20R, V35T, E36A, T39E, E40D, K49R, F87L, A158S, K173A, D177E, T200A, Q207E, R211K, V245Q	C
Hawke (2013)	18317169	18317169	KC237995	None	None			V35T, E36A, T39E, E40D, S48T, K49R, K122E, D123N, K173AITV, D177E, T200A, Q207E, V241I, V245Q, E248N	C
	21237697	21237697	KC238059	None	None			V35T, E36A, T39D, E40D, S48T, V60I, K102Q, D121Y, K122E, S162A, K173A, Q174EGKR, D177E, T200A, Q207E, R211K, V245Q	C
	21376678	21376678	KC238062	None	None			V35T, E36A, T39E, E40D, S48T, K122E, D123NS, T165I, K173T, D177E, T200A, I202V, Q207E, R211K, V245E, D250E	C
Temereanca (2013)	SR24	SR24	JX966501	None	None			L12V, A33P, V35T, E36A, T39E, E40D, S48T, K122E, D123S, I135T, K173T, Q174K, D177E, I178V, T200A, Q207E, V245Q, E248D, A272P, K277R, E291D, V292I, I293V	C
Tramuto (2013)	CV1270_23	CV1270_23	HQ667677	None	None			V8I, V35T, E36A, T39E, E40D, K49KR, K122E, D123G, A158AS, K173T, D177E, T200V, E203D, Q207D, V245Q, D250E, S251V, A272P, K277R, T286A, E291D, V292I, I293V, P294V	C

Reverse Transcriptase Inhibitors

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