<!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

Reverse Transcriptase Inhibitors

Subtype C
Gene RT
Mutation G333E
Rx RTI-naive
IncludeMixtures No
References 14
Patients 20
Isolates 20
 
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Sequences matching input query are shown below. Original reference, patient identifier, isolate name, partial treatment histories and accession number are indicated. Complete treatment histories, when available, can be accessed by clicking the isolate name. Sequences may additionally be downloaded in the fasta format, or viewed as individual or composite alignments using the options above. If the user wishes to view individual alignments of isolates for which there are multiple clones, the user can choose to view either an alignment of consensus sequences derived from the clones or an alignment of each clone as well as a consensus sequence.

Author (yr) Patient Isolate Acc# NRTIs NNRTIsNRTIDRMs NNRTIDRMs OtherMutSubtype
Maljkovic (2003)MI_Pat4999SE18397AY165223NoneNone  V35T, E36A, T39E, S48T, K122E, S162Y, K173A, D177E, I178L, G196E, T200A, E204K, Q207E, R211M, P243T, V245Q, S251N, A272P, Q278R, T286A, E291D, V292I, I293V, G333E, Q334H, G335DC
Carrion (2004)ARG4006ARG4006AY563170NoneNone  V35T, T39E, S48T, K122E, A158S, K173A, D177E, T200A, E204K, Q207E, R211K, F214L, V245Q, A272P, E291D, V292I, I293V, E297A, G333E, R356K, G359T, K366R, T377Q, V381I, K390R, A400S, E404D, V435T, L452M, V466I, S468A, H483Q, S519N, K527Q, A534S, A554S, K558RC
Bussmann (2005)01BW386S01BW386SAY829276NoneNone  V35T, E36A, T39E, S48T, K122E, D123G, K173A, D177E, I178M, T200A, Q207N, V245H, D250E, S251N, A272P, E291D, V292I, G333E, Q334HC
Weber (2005)F81301F81301AY677579NoneNone  V35T, E36A, T39E, S48T, K122E, D123S, I142V, A158S, K173A, D177E, T200A, Q207E, R211K, V245Q, E248D, A272P, K277R, T286A, E291D, V292I, I293V, S322A, I329IL, G333EC
Rousseau (2006)Pt16804PS284B1DQ164120NoneNone  V35T, T39K, S48T, V60I, K122E, D123G, I142V, S162A, K173A, D177G, T200A, Q207E, V245Q, T286A, E291D, V292I, I293V, P313T, V317A, G333E, Q334N, R356K, M357K, G359T, I375V, T377L, K390R, A400R, E404D, V435A, G436E, V467I, S468T, L469I, D471E, H483Q, L491S, E492K, S519N, K527N, A534S, A554K, K558RC
Brumme (2007)1332PRRT_1332EF368642NoneNone  V21I, V35T, E36A, T39E, S48T, V60I, K122KE, K173T, D177E, T200A, I202IV, Q207R, R211K, V245HQ, K277R, E291D, V292I, I293V, G333E, Q334H, R356K, G359AT, T377M, K390RC
Vidal (2007)U270202BU.U2702AM260248NoneNone  K32R, V35T, E36A, T39E, S48T, K122E, A158S, K173T, D177E, T200A, Q207K, V245Q, A272P, K277R, T286A, E291D, V292I, I293V, D324E, I329L, G333E, R356K, G359T, T377L, K390R, E404DC
 U070202BU.U0702AM260287NoneNone  K32E, V35T, E36A, T39E, S48T, V60I, K122E, D123S, I135R, A158S, K173A, D177E, T200A, Q207N, D218X, V245K, D250E, A272P, K277R, T286A, E291D, V292I, I293V, I326V, G333E, R356K, M357L, G359T, K366R, T377M, K390R, A400T, E404DC
Matthews (2008)PS164PS164FJ199727NoneNone  D177E, T200A, Q207G, F214L, V245Q, A272S, T286A, E291D, V292I, I293V, G333E, Q334Y, R356K, G359T, T377L, K385R, T386I, K390R, T397A, E399G, A400I, E404D, V435I, L452M, R461K, V466I, S468T, T470S, D471E, H483Q, E492G, S519N, K530R, A534SC
 PS284PS284FJ199775NoneNone  V35T, T39K, S48T, V60I, K122E, D123G, I142V, S162A, K173A, D177G, T200A, Q207E, V245Q, T286A, E291D, V292I, I293V, P313T, V317A, G333E, Q334N, R356K, M357K, G359T, I375V, T377L, K390R, A400R, E404D, V435A, G436E, V467I, S468T, L469I, D471E, H483Q, L491S, E492K, S519N, K527N, A534S, A554K, K558RC
 SK038SK038FJ199864NoneNone  V8I, V35T, E36A, T39E, S48T, V60I, K122E, D123G, K173A, Q174K, D177G, V179I, T200A, I202V, Q207A, V245Q, D250E, S251N, A272S, T286A, E291D, V292I, I293V, G333E, Q334C, T338S, R356K, G359T, T377L, K390R, A400R, E404D, E413D, V435A, L469I, D471E, H483QC
Nyombi (2008)TMS348TMS348EU251881NoneNone  V8I, V35T, E36A, T39E, S48T, K122E, A158S, K173A, Q174H, D177E, T200A, Q207A, R211K, P243T, V245Q, E248D, A272S, K277R, T286A, E291D, V292I, I293V, E297K, G333E, F346Y, R356K, M357T, G359AC
Vercauteren (2009)pt10526936846529GQ399972NoneNone  T39E, S48T, K103KR, K122E, D123N, K173A, I178M, T200A, Q207E, V245Q, E248ED, D250E, S251SDGN, A272P, K277R, Q278H, T286A, E291D, V292I, I293V, K311R, G333E, Q334HC
Chaturbhuj (2010)1-0151-015FJ878944NoneNone  V35T, T39TAEK, S48T, V60VI, K122E, D123S, K173A, D177E, I178M, T200A, Q207N, R211K, V245Q, A272P, E291D, I293V, G333EC
Tymchuck (2010)MW23MW23HM744732NoneNone  V35T, T39E, S48T, K122E, K173A, Q174R, D177E, G196E, T200A, Q207E, R211K, V245Q, E248V, K277R, T286A, I293V, G333E, Q334HC
Hamers (2011)302393CP076302393HM120102NoneNone V179VDV21I, V35T, T39E, K43R, S48T, W88C, K102Q, V118I, K122E, E138A, T139A, S162C, K173T, Q174K, T200A, Q207E, R211K, F214L, V245Q, T286TA, E291D, V292I, P313Q, I329IV, G333E, Q334NC
 303959CP076303959HM120146NoneNone  V35T, E36A, T39E, S48T, K122E, D123G, K173A, D177E, T200A, E204K, Q207D, R211K, P243S, V245Q, E248D, D250E, A272P, K277R, T286A, E291D, V292I, I293V, G333E, Q334LC
Bila (2013)MZ10-159HIV-1KF927264NoneNone  T27S, K32N, V35K, T39D, S48T, V60VI, D123E, I135R, K173T, T200A, I202IV, E204K, Q207E, R211K, F214L, V245Q, K281R, T286A, E291D, V292I, I293V, H315HY, S322A, G333E, Q334HC
 MZ10-143_XAHIV-1KF927250NoneNone  V35T, T39K, E40D, S48T, K104R, K122E, D123NS, I135V, K173AT, D177E, T200K, Q207A, R211K, P243T, V245Q, A272AS, K277R, T286A, E291D, V292I, I293V, G333E, Q334HC
 MZ10-188HIV-1KF927289NoneNone  K13KR, V35K, T39D, S48T, T58TP, K122E, D123N, S162AT, K166R, K173A, D177E, T200A, E204K, Q207E, V245Q, A272P, K275R, K277R, Q278HN, T286A, E291D, V292I, I329L, G333E, Q334H, G335SC