<!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

Reverse Transcriptase Inhibitors

Subtype A
Gene RT
Mutation E40D
Rx RTI-naive
IncludeMixtures No
References 99
Patients 385
Isolates 389
 
Show mutation frequency as:
Exclude mutations:

Sequences matching input query are shown below. Original reference, patient identifier, isolate name, partial treatment histories and accession number are indicated. Complete treatment histories, when available, can be accessed by clicking the isolate name. Sequences may additionally be downloaded in the fasta format, or viewed as individual or composite alignments using the options above. If the user wishes to view individual alignments of isolates for which there are multiple clones, the user can choose to view either an alignment of consensus sequences derived from the clones or an alignment of each clone as well as a consensus sequence.

Author (yr) Patient Isolate Acc# NRTIs NNRTIsNRTIDRMs NNRTIDRMs OtherMutSubtype
Gao (1996)92UG03792UG037U51190NoneNone  E6S, K20R, V21I, V35T, T39A, E40D, K43R, K46R, V60I, K122E, D123S, I135T, S162A, K173S, Q174K, Q207E, R211K, V245E, D250E, E291D, V292I, I293V, P294T, E312D, V317A, G335D, T338I, M357K, G359S, T369A, A371V, I375V, A376V, T377M, A400T, T403M, E404D, W410*, E432D, V435A, D471E, Q480H, L491S, K512R, S519N, Q524K, K527E, E529D, A534S, A554SA
Cornelissen (1997)92RW01692RW016AF009409NoneNone  V35T, E40D, K49R, H96X, G99X, K122E, D123S, I135T, K173S, D177E, V179I, Q207A, R211S, V245Q, K281R, E291D, I293V, P294TA
 92UG03192UG031AF009398NoneNone  E6D, V35T, E40D, V60I, V118I, K122E, D123N, I135T, E138A, I142V, K173S, Q174K, V179I, T200A, Q207G, R211S, F214L, V245E, D250E, S251H, T286A, E291D, V292I, I293V, P294AA
Carr (1999)SE9488SE9488AF071474NoneNone  K11T, V35T, E40D, I47L, K49R, V60I, I135T, E169A, K173S, D177E, V179I, Q207A, R211S, V245Q, E248D, A288S, E291D, I293V, P294T, K311R, E312D, G335D, R356K, M357K, G359S, K366R, T369A, A371V, I375V, A376V, T377M, V381I, A400T, T403M, E404D, E432D, V435I, D471E, Q480H, H483Q, L491S, K512R, L517I, S519N, Q524K, K527Q, E529D, A534S, A554SA
Becker-Pergola (2000)225.745BPG225.745AF177544NoneNone  K11Q, E29D, V35T, T39A, E40D, K49R, K122E, D123S, I135T, I142V, K173S, D177E, V179I, T200A, Q207A, R211S, V245Q, K281R, L283I, E291ED, I293V, P294T, E312DA
 171.005BPG171-005AF177366NoneNone  E6D, V35T, E40D, K43R, V118I, K122E, D123N, I135T, S162G, K173S, Q174K, D177E, V179I, Q207A, R211S, F214L, P243S, V245E, A272P, K281R, E291D, I293V, P294T, E312DA
 190.574BPG190-574AF177368NoneNone  V35T, E40D, V60I, K122E, D123S, I135T, A158S, T165I, K173LS, Q174K, D177E, V179I, T200A, Q207A, R211S, V245E, D250E, E291D, I293V, E297K, E312DA
 225.706BPG225-706AF177371NoneNone  E6DN, V35T, E40D, V60I, K122E, D123N, I135T, K173A, Q174K, D177E, I178IL, V179I, I202V, Q207K, R211S, F214L, V245E, D250E, V261I, T286A, E291D, V292VI, I293V, P294T, E312DA
Vergne (2000)LVMP582LVMP582AJ286930NoneNone  K11T, K20R, E29D, V35T, E40D, K49R, K122E, D123N, I135T, I142V, K173S, D177E, V179I, Q207A, R211S, V245Q, E248D, E291D, I293V, P294T, E312D, G335D, I341V, M357K, G359S, T369A, A371V, I375V, A376V, T377M, A400T, T403M, E404DA
 LVMP1270LVMP1270AJ287032NoneNone  K11T, V35T, T39N, E40D, K122E, D123S, A158S, K173T, D177E, T200A, E203D, Q207A, V245Q, L260I, A272P, T286A, E291D, I293V, P294T, E312D, I326V, G335E, M357K, R358G, G359S, E370A, A371V, I375V, T377I, K390R, T403MA
Balotta (2001)CB-2045CB-2045AF295285NoneNone  V21I, V35T, T39A, E40D, V60I, K122E, D123S, I135T, K173L, Q174K, D177G, V179I, T200I, Q207A, R211S, V245Q, E248D, D250E, K281R, T286A, E291D, V292I, I293V, P294T, E297KA
 CB-2673CB-2673AF295286NoneNone  V21I, V35T, T39A, E40D, V60I, K122E, D123S, I135T, K173L, Q174K, D177E, V179I, T200I, Q207A, R211S, V245Q, E248D, D250E, K281R, T286A, E291D, V292I, I293V, P294T, E297KA
Carr (2001)CM53392CM53392AF377957NoneNone  K11S, V35T, T39N, E40D, V60I, K104R, K122E, D123S, I135T, T165I, K173A, D177E, T200A, Q207K, R211K, V245Q, K281R, E291D, V292I, I293V, P294T, E297K, S322G, D324E, Q334D, G335D, R356K, M357R, G359S, K366R, A371V, K374R, I375V, A376T, K390R, K395R, A400T, T403M, V435E, D471E, Q480H, H483Y, G490E, L491T, E492K, K512R, L517V, S519N, Q524K, K527E, A534S, A554SA
Yahi (2001)NY_M23M23AY010450NoneNone  V35IT, T39N, E40D, D121DY, K122E, I135T, S162C, K173T, Q174K, Q207A, R211SA
Dowling (2002)KNH1207KNH1207AF457068NoneNone  V35T, E40D, I47L, K49R, K122E, D123G, K173S, Q174K, D177E, V179I, Q207A, R211S, V245Q, K281R, E291D, I293V, L295M, E312D, G335D, R356K, M357R, G359S, A371V, I375V, A376V, T403M, E404D, E432D, T459I, D471E, Q480H, L491S, K512R, S519N, Q520L, K527G, E529D, A534S, A554SA
 KNH1199KNH1199AF457067NoneNone  V35T, E40D, K49R, V60I, F87L, A98S, K122E, D123N, I135T, K173L, Q174K, D177E, V179I, T200A, Q207A, R211S, D250E, K277R, T286A, E291D, I293V, P294T, K311R, E312D, G335D, M357K, R358K, G359S, K366R, T369A, A371V, I375V, A376V, T377M, K390R, A400T, T403M, E404D, E432D, V435A, V466I, D471E, K476R, Q480H, H483Y, L491S, Q507H, K512R, E514D, S519N, Q524K, K527G, E529D, A534S, A554SA
Hanna (2003)HG100HG100AY049532NoneNone  T39N, E40D, K122E, D123S, I135T, I142V, K173S, Q174K, D177E, V179I, T200A, Q207A, R211RS, V245QA
Jorgensen (2003)JLB_Pat81HIM419507AJ419507NoneNone  K11KN, V35T, T39M, E40D, I50V, V60I, K122E, D123S, I135T, I142V, S162A, T165I, K173S, Q174K, D177E, V179I, T200A, Q207A, R211K, D250E, Q278H, T286A, E291ED, I293V, P294A, E312D, V317A, D320DEA
Maljkovic (2003)MI_Pat900SE19902AY165240NoneNone  K11T, V21I, V35T, T39N, E40D, V60I, D121H, K122E, D123S, R172RK, K173AT, Q174K, D177E, Q207A, R211S, V245Q, I257L, A272P, K275KQ, K277R, T286A, E291D, I293V, P294T, E312D, Q334E, G335DA
Shafer (2003)A384_27742774aEF548532NoneNone  E40D, V60I, K64R, D76DN, D110DN, V111VL, D113DN, D121H, K122E, D123S, I135T, K173S, Q174K, D177E, V179I, T200TA, Q207A, R211S, V245MA
Arroyo (2004)01TZA35901TZA359AY253319NoneNone  E6T, T27S, V35T, E40D, K49R, E53K, V60I, K122E, D123G, I135T, E169D, K173A, Q174K, D177E, T200A, Q207E, F214L, D250E, G262E, T286A, E291D, I293V, E302K, E312D, G335D, M357K, G359S, K366R, T369A, A371V, I375V, A376V, T377M, A400T, T403M, E404D, E432D, G453E, V466I, D471E, Q480H, S519N, K527N, E529K, A534S, A554SA
Eshleman (2004)SE599SE599pAY435394NoneNone  V35T, E40D, I50V, K122E, D123S, I135T, I142T, K173S, D177E, V179I, Q207A, R211S, F214L, V245Q, A272P, E291D, I293V, P294T, L310I, E312D, D324EA
Konings (2004)KFA_01CMNYU520301U5203AY534744NoneNone  V35T, E40D, S48T, V60I, V118I, K122E, D123N, K173S, I202V, Q207A, R211S, F214L, V245Q, E248D, D250E, S251N, Y271F, A272P, V276I, T286A, E291D, V292I, I293V, P294T, L295M, E297Q, E312D, I326V, G335D, R356K, M357R, G359S, T369V, A371V, I375V, A376S, T386I, K390R, A400L, E432D, V435L, L452S, R461K, V467I, S468T, D471E, Q480H, H483Y, L491S, K512S, L517I, S519N, Q524K, K527E, K530R, A534SA
Servais (2004)SJ_Pat5SJKLM030AJ413009NoneNone  I37X, E40D, K49KR, K122E, D123N, K173S, Q174K, D177E, V179I, Q207A, R211S, F214L, K238KIA
 SJ_Pat10SJKLM017AJ412997NoneNone  I37X, E40D, K49R, I50V, V60I, D121H, K122E, I135T, K173L, Q174K, D177E, V179I, T200A, Q207A, R211S, V245KA
 SJ_Pat11SJKLM050AJ413023NoneNone  I37X, E40D, K122E, D123N, K173S, Q174K, D177E, V179I, Q207A, R211S, F214L, V245QA
 SJ_Pat12SJKLM034AJ413011NoneNone  I37X, E40D, K49R, V60I, D121Y, K122E, I135T, K173L, Q174K, D177E, V179I, T200A, Q207A, R211S, I244VA
 SJ_Pat14SJKLM051AJ413024NoneNone  I37X, E40D, S48T, K49R, K122E, D123N, E138G, K173S, V179I, Q207A, V245QA
 SJ_Pat15SJKLM019AJ412999NoneNone  I37X, E40D, S48T, K49R, V60I, K122E, D123S, I135T, T165I, K173S, Q174K, V179I, D186DY, T200A, Q207A, R211S, V245QA
 SJ_Pat21SJKLM004AJ412985NoneNone  I37X, E40D, K49R, Q145C, K173S, D177E, V179I, T200A, I202V, Q207A, R211S, V245QA
 SJ_Pat22SJKLM020AJ413000NoneNone  I37X, E40D, V60I, D121H, K122E, D123G, T165I, K173S, Q174K, D177E, V179I, T200A, Q207A, R211S, V245QA
 SJ_Pat26SJKLM023AJ413002NoneNone  I37X, E40D, S48ST, K49KR, K122E, D123N, I142V, K173S, D177E, I178IL, V179I, Q207A, R211S, V245P, L246VA
 SJ_Pat29SJKLM009AJ412989NoneNone  I37X, T39M, E40D, K122E, D123N, I135T, S162C, K173S, D177E, V179I, T200A, Q207A, R211S, V245QA
 SJ_Pat32SJKLM026AJ413005NoneNone  I37X, E40D, K49R, K122E, D123N, K173S, Q207A, R211SA
 SJ_Pat41SJKLM047AJ413020NoneNone  I37X, E40D, K49R, K122E, I135T, G141GE, S162H, K173A, Q174K, D177E, V179I, Q207A, R211S, V245EA
 SJ_Pat42SJKLM048AJ413021NoneNone  I37X, T39A, E40D, V60I, D121Y, K122E, D123G, I135T, I142V, K173X, Q174K, D177E, V179I, D186N, D192N, Q207A, R211S, M230I, V245IA
Snoeck (2004)BE48BE48AY901303NoneNone  K11T, V35T, E40D, K49R, N57NI, K122E, D123NS, I135IV, E169T, K173S, D177E, V179I, T200A, Q207A, R211S, F214LA
 BE58BE58AY901310NoneNone  V35T, T39A, E40D, V60I, K104KR, K122E, D123S, I135T, I142V, K173LS, Q174K, D177E, V179I, T200A, Q207A, R211S, V245Q, D250E, K281KR, T286A, E291D, I293V, P294T, L295LM, K311KR, E312DA
 BE65BE65AY901498NoneNone  K22R, E28EA, V35T, T39E, E40D, K49KR, I50IV, V118I, K122E, D123NS, I135T, K173L, Q174K, D177E, Q207A, R211S, F214L, V245X, E248ED, D250DE, S251SN, K281R, T286A, E291D, V292I, I293V, P294T, E312DN, D320DE, D324EA
Yang (2004)98KE17898KE178AY492761NoneNone  K20R, K32R, V35T, E40D, K49R, V60I, K122E, D123S, I135T, T165I, K173S, Q174K, D177E, V179I, Q207A, R211S, V245Q, D250EA
 99KE57999KE579AY492780NoneNone  V35T, E40D, V60I, D121H, K122E, D123E, I135T, K173S, Q174K, D177E, V179I, Q207A, R211S, V245K, D250EA
Brown (2005)BB_92UG_02992UG_029AY713407NoneNone  E6D, V35T, E40D, K49R, V60I, K122E, D123S, I135T, K173S, Q174K, D177E, V179I, Q197K, T200A, Q207A, R211S, V245E, E248A, D250E, K275Q, T286A, E291D, V292I, I293V, P294T, E312D, G335D, M357K, G359S, T369A, A371V, I375V, A376T, T377M, A400T, T403R, E404D, E432D, L452Q, T470N, D471E, Q480H, H483Y, L491S, K512R, E516G, Q524K, K527E, E529D, A534S, A554SA
Ciccozzi (2005)MC_AY611655A44AY611655NoneNone  V35T, E40D, V60I, D121E, K122E, D123N, I135T, K173S, Q174K, D177E, I178M, V179I, Q207A, R211S, F214L, V245I, D250E, K281R, T286A, E291D, V292I, I293V, P294T, E312N, V317A, A327VA
 MC_AY611703A25AY611703NoneNone  V21I, V35T, E40D, V60I, K122E, D123N, I135T, K173S, Q174K, D177E, V179I, T200A, Q207A, R211S, V245K, D250E, T286A, E291D, V292I, I293V, E312D, V317AA
 MC_AY611714A40AY611714NoneNone  V35T, E40D, V60I, K122E, D123N, I135T, K173S, Q174K, D177E, V179I, Q207A, R211S, V245I, D250E, T286A, E291D, V292I, I293V, P294T, E312D, V317AA
Grossman (2005)2078120781RT271 NoneNone  T39K, E40D, K122E, D123S, A158S, K173L, Q174K, D177E, K201KQ, Q207A, R211S, V245MA
K'Aluoch (2005)OK_TC023504TC023504DQ079827NoneNone  V35T, T39A, E40D, V60I, D121H, K122E, I142V, K173S, Q174K, D177E, V179I, T200A, Q207A, R211S, D250E, E291D, I293V, P294T, K311RA
Non-B Workgroup (2005)IL353IL353AY901361NoneNone  E40D, V60I, K102Q, K104R, K122E, D123S, K166R, F171FL, K173A, Q174K, D177E, V179I, Q197L, T200A, Q207A, R211S, V245N, L246C, P247RA
Paraskevis (2005)GRSPR57GRSPR57AY940276NoneNone  E40D, V60I, D123E, I135T, K173S, Q174R, D177E, I178L, V179I, Q207A, R211SA
 GRSPR114GRSPR114AY940275NoneNone Y181CE40D, K49R, V60I, K122E, D123N, I135T, K173L, Q174K, V179I, T200A, Q207T, R211SA
 GRSPR46GRSPR46AY940272NoneNone  E40D, K49R, V60I, L100P, K122E, D123N, I135T, K173S, Q174K, D177E, T200A, Q207A, R211S, V245KA
Vazquez de Parga (2005)RUSO02RUSO02EU345799NoneNone  V35T, T39M, E40D, V60I, K122E, D123S, I135T, K173L, Q174K, Q207A, R211S, V245LQ, E248D, A272P, T286A, E291D, V292I, I293V, P294T, D324EA
Eshleman (2006)SE599599-preDQ230330NoneNone  V35T, E40D, I50V, K122E, D123S, I135T, I142T, K173S, D177E, V179I, Q207A, R211S, F214L, V245Q, A272P, E291D, I293V, P294T, L310I, E312D, D324EA
Lindstrom (2006)SIIDC0204SIIDC0204 NoneNone  V35T, E40D, V60I, K122E, D123N, I135T, K173S, Q174K, D177E, V179I, Q207A, R211S, V245R, D250EA
Marechal (2006)JF_051JF_051DQ443571NoneNone  E6R, V35T, T39N, E40D, K122E, D123E, S162D, K173S, D177E, Q207E, V245Q, L246V, E248N, S251G, N255HA
 JF_079JF_079DQ443585NoneNone  V35IT, T39N, E40D, D123E, I142V, A158S, K173A, Q174K, D177E, V179I, Q207D, R211KA
 JF_124JF_124DQ443611NoneNone  E6K, K11A, D17E, V35T, T39N, E40D, K122E, D123N, K173S, D177E, Q207S, R211K, V245Q, E248DA
Njai (2006)MP58297CM.582AM279370NoneNone  K11T, K20R, E29D, V35T, E40D, K49R, K122E, D123N, I135T, I142V, K173S, D177E, V179I, Q207A, R211S, V245Q, E248D, E291D, I293V, P294T, E312D, G335D, I341V, M357K, G359S, T369A, A371V, I375V, A376V, T377M, A400T, T403M, E404D, E432D, V435L, R463K, D471E, Q480H, H483L, L491S, Q507H, K512R, E514D, S519N, Q524K, K527G, E529D, A534S, A554SA
Saad (2006)MDS_01UAPol30401UAPol304DQ055259NoneNone  K11T, V35T, T39K, E40D, D123S, K173L, Q174K, D177E, Q207A, R211SA
Vessiere (2006)AV_M4556NAV_M4556NDQ297332NoneNone  V35T, E40D, K49R, K122Q, I135T, K173AS, Q174K, D177E, V179I, T200A, Q207A, R211T, V245QA
 AV_M4716NAV_M4716NDQ297338NoneNone  K11A, V35T, T39N, E40D, V60I, D121Y, K122E, D123G, I135T, E169D, K173A, Q174K, D177E, G196E, Q207A, R211S, V245Q, E248NA
Vidal (2006)NV_KS00902.KS009AM041007NoneNone  V35T, E40D, K49R, K122E, D123N, I142V, K173A, D177E, V179I, T200A, Q207A, R211S, V245Q, A272S, T286A, E291D, V292I, I293V, P294T, E312N, G335D, M357R, R358G, G359S, E370A, A371V, I375V, A376V, T403M, E432D, V435IA
Zarandia (2006)MZ_03GEMZ00703GEMZ007DQ205266NoneNone  K11T, V35T, E36D, T39N, E40D, K122E, D123S, K173L, Q174K, D177E, Q207A, R211SA
 99GEMZ01199GEMZ011DQ205257NoneNone  K11T, V35T, E36D, T39N, E40D, K104R, K122E, D123S, I135T, S162C, K173S, Q174K, D177E, Q207A, L210M, R211SA
 03GEMZ03703GEMZ037DQ207944NoneNone  K11T, V35T, E36D, T39N, E40D, K104R, K122E, D123S, I135T, S162C, K173S, Q174K, D177E, Q207A, L210M, R211S, V245M, P247L, E248D, A272P, T286A, E291D, V292I, I293V, P294T, K311R, I326V, R356K, M357K, R358G, G359S, E370A, A371V, I375V, K390R, T403M, L452I, S468P, D471E, Q480H, L491S, I506V, K512R, L517I, S519N, Q520K, Q524K, K527E, K530R, A534S, A554N, K558RA
Baker (2007)A1021MBA1021-170805EF186204NoneNone  L26W, V35T, E40D, V60I, K173S, Q174K, D177E, V179I, T200A, Q207A, R211S, V245M, D250E, T286A, E291ED, I293V, P294PT, E312NA
 A1037MBA1037-060905EF186211NoneNone  V35T, E40D, K49R, V60I, K122E, D123S, I135T, K173A, Q174K, D177E, I178IV, V179I, G196E, Q207A, R211RS, V245T, D250E, K275R, V276I, T286A, E291D, I293V, P294T, E297K, E312DA
Brumme (2007)1660PRRT_1660EF368970NoneNone  V35T, E40D, V60I, D121H, K122E, I135T, K173S, Q174K, D177E, V179I, I202V, E203ED, Q207A, L210LM, R211S, V245EK, D250E, S251SN, T286A, E291D, V292I, I293V, E312D, A327AV, Q334P, G335D, M357R, G359S, T369A, A371AV, I375V, A376AV, K390RA
Church (2007)031-106897U031EF611996NoneNone  E6D, V35T, E40D, K49R, V60I, K122E, D123N, I135T, K173S, Q174K, D177E, I178V, V179I, Q207D, R211RS, V245K, D250E, V261I, K275Q, K281R, T286A, E291D, V292I, I293V, E312D, V317VAA
 034-109734M034EF611999NoneNone  E6D, V35T, E40D, K49KR, V60I, K122E, D123DG, I135T, S162A, K173S, Q174K, D177E, V179I, T200TA, Q207D, V245E, D250E, S251N, T286A, E291D, V292I, I293V, P294T, E312D, V317VAA
 046-110300R046EF612003NoneNone  K20R, V35T, E40D, K49R, K122E, D123N, I135T, K173S, Q174QK, V179I, Q207A, R211S, V245Q, E291D, I293V, P294T, L295M, E312DA
 057-110308G057EF612007NoneNone  E6D, K20R, V35T, T39TA, E40D, V60I, V106VI, D123E, I135T, K173A, Q174K, D177DE, I178IV, V179I, Q207A, F214L, V245Q, D250E, E291D, V292I, I293V, P294T, E312NA
 199-114660F199EF612015NoneNone  E6N, V35T, E40D, V60I, K122E, I135T, K173A, Q174K, D177E, V179I, Q207A, R211S, V245EKQ, E248ED, D250E, S251HN, T286A, E291D, V292I, I293V, P294T, E312D, V317AA
 408-125049Q408EF612022NoneNone  K11T, V35T, E40D, K43R, K122E, D123N, K173A, D177E, V179I, Q207A, R211S, F214L, V245K, D250E, T286A, E291D, I293V, P294T, E312D, V317AA
 476-126649x476EF612039NoneNone  E6N, V35T, E40D, K43R, K122X, D123E, K173ALSV, Q174K, D177E, V179I, Q207A, R211S, V245Q, E291D, I293V, P294T, E312D, A327VA
 503-127844l503EF612048NoneNone  V8I, V35T, E40D, K49R, K122E, D123S, I135T, T165I, K173S, D177E, E194ED, T200A, Q207AT, R211S, V245Q, E291ED, I293V, P294T, E312D, S322SA, A327AVA
 514-128712J514EF612052NoneNone  E6D, V35T, E40D, K49R, V60I, K122E, D123S, I135T, K173S, Q174K, D177E, V179I, Q207A, R211RS, V245Q, D250E, T286A, E291D, I293V, P294T, E312D, P321SA
 582-130283Q582EF612073NoneNone  I5IV, E6ED, K11KN, V35T, E40D, K43R, K49R, V60I, D121H, K122E, I135T, I142V, K173AS, Q174K, D177E, V179I, T200A, Q207A, R211S, V245E, D250E, K277KR, T286A, E291D, V292I, I293V, P294T, E312DA
 584-131489e584EF612075NoneNone  V35T, E40D, V60I, D121Y, K122E, K173S, Q174K, D177E, I178M, V179I, T200A, Q207A, R211S, D250E, K281R, T286A, E291D, V292I, I293V, P294T, E312D, V317AA
 662-135975N662EF612099NoneNone  K11T, V35T, E40D, K43KR, K122KE, D123DGNS, K173L, Q174K, D177E, I178V, V179I, T200A, Q207A, R211S, F214L, V245Q, D250S, A272P, K275Q, K277R, T286A, E291D, V292I, I293V, P294T, E312D, S322AA
 679-137708Q679EF612104NoneNone  E6K, K11T, V35T, T39TAIV, E40D, K122E, D123N, T139TA, K173S, D177E, V179I, T200A, Q207A, F214L, V245Q, A272T, K277KR, T286A, E291D, I293V, P294T, E312D, G333GEA
 690-138008N690EF612109NoneNone  E6N, K11KR, V35T, T39TA, E40D, K49KR, V60VI, K64KR, K122E, D123NS, I135T, K173L, Q174K, D177E, V179I, G196E, Q207A, R211S, V245X, D250DE, A272P, K275Q, K277R, T286A, E291D, V292VI, I293V, P294T, E312DA
 702-136536A702EF612115NoneNone  E6D, K20R, V35T, E40D, V60I, K122E, D123G, I135T, K173S, Q174T, D177E, T200A, I202V, Q207K, R211S, F214L, D250E, T286A, E291D, V292I, I293V, E312NA
 792-142856n792EF612147NoneNone  K11T, V21I, V35T, T39A, E40D, K122E, D123N, K173L, Q174K, D177E, V179I, I202V, Q207A, R211S, V245Q, E248D, T286A, E291D, I293V, P294T, L295M, E312DA
 820-144896A820EF612159NoneNone  K11RT, E28G, V35I, E40D, K49R, K122E, D123S, I135T, S162SN, K173S, Q174K, D177E, V179I, I202IV, Q207A, R211S, F214L, V245Q, E248D, A272T, T286A, E291D, I293V, E312DA
 839-146276F839EF612164NoneNone  E6D, K11Q, V35T, E40D, K49R, V60I, D123N, T165I, K173T, D177E, T200A, Q207E, V245Q, D250E, V292VI, I293V, P294TA
 866-147223K866EF612174NoneNone  K20R, V35T, E40D, V60I, K102Q, K122E, D123NS, I142IV, K173AS, Q174K, D177E, T200A, I202V, Q207A, R211S, P243PS, V245K, D250E, S251SN, A272P, K281R, T286A, E291D, V292I, I293V, P294T, E312DA
 876-147573X876EF612178NoneNone  V35T, E40D, V60I, K122E, D123N, I135T, K173S, Q174K, T200L, Q207A, R211S, V245T, D250E, T286A, E291D, V292I, I293V, P294T, E312D, V317AA
Galluzzo (2007)24260RW_24260JQ220022NoneNone  E40D, K49R, V60I, K122E, D123S, I135IT, I142V, K173A, D177E, V179I, Q197QK, T200A, Q207A, V245KA
 24130RW_24130JQ220056NoneNone  E40D, K49R, K122E, D123S, K173S, D177E, V179I, I195IT, Q207A, R211S, V245QA
 M22310UG_M22310JQ220072NoneNone  E40D, V60I, D121Y, K122E, K173A, Q174K, D177E, V179I, T200R, Q207A, R211S, K238R, V245QA
 M21200UG_M21200JQ220136NoneNone  E40D, K43R, K122E, D123S, K173L, Q174K, D177E, I178V, V179I, T200A, I202IV, Q207A, R211S, F214L, K238KI, V245QA
 M21270UG_M21270JQ220150NoneNone  E40D, K49R, V60I, K122E, D123GS, Q174K, D177E, I178IM, Q207A, V245KA
Gatanaga (2007)C04-51110143-1C04-51110143-1AB640243NoneNone  I31T, V35T, E40D, V60I, R83S, D121H, K122E, I135T, I142V, K173S, Q174K, D177E, V179I, Q207A, R211NA
Han (2007)LN1400CNLN14EF122512NoneNone K103NK11N, V35T, E40D, K49R, V60I, K122E, D123S, K173S, D177E, V179I, Q207A, R211S, V245TA
 LN1300CNLN13EF122563NoneNone  V35T, E40D, K49R, V60I, K122E, D123S, K173S, D177E, I178M, V179I, Q207A, R211S, V245TA
Holguin (2007)LP582659LP582659DQ009048NoneNone  K11T, T27S, V35T, T39N, E40D, K49R, I50IV, D123N, K173AS, Q174K, D177E, I178IV, V179VI, T200A, Q207A, R211S, V245Q, K281R, T286A, E291D, V292T, I293V, P294A, E297R, A304EA
Li (2007)PS10441044_d0DQ676872NoneNone  E28A, V35T, E40D, V60I, K122E, D123N, I135T, F171Y, K173A, Q174K, V179I, T200A, Q207A, R211S, V245N, D250E, T286A, E291D, I293V, P294T, D324E, G335D, M357K, G359S, H361HY, K366R, T369A, A371V, I375V, A376V, T377M, E399D, A400T, T403M, E404D, E432D, V467I, D471E, Q480H, H483Y, L491S, K512R, S519N, Q524K, K527G, E529D, A534S, A554S, K558RA
  1044_d177DQ676873NoneNone  E28A, V35T, E40D, V60I, K122E, D123N, I135T, F171Y, K173A, Q174K, V179I, T200A, Q207A, R211S, V245N, D250E, V276VI, T286A, E291D, I293V, P294T, D324E, G335D, M357K, G359S, K366R, T369A, A371V, I375V, A376V, T377M, E399D, A400T, T403M, E404D, E432D, V467I, D471E, Q480H, H483Y, L491S, K512R, S519N, Q524K, K527G, E529D, A534S, A554S, K558RA
Lwembe (2007)NYU6262MFEB01 NoneNone  V35T, E40D, K49R, V60I, V106I, K122E, D123S, K173S, Q174K, D177E, I178M, V179I, T200A, Q207A, R211SA
  62MSEP02 NoneNone G190AV35T, E40D, V60I, K101Q, V106I, K122E, D123G, K173L, Q174K, D177E, V179I, T200A, Q207A, R211SA
McNulty (2007)Cam32Cam32PLDQ869193NoneNone  E6N, V8I, K11T, V35T, E40D, V118I, D121H, K122E, D123S, I142V, F171Y, K173S, D177E, I202V, Q207A, R211S, F214LA
Razafindratsimandresy (2007)1111HIV-SEYEF143545NoneNone  K11R, V21I, V35T, T39A, E40D, K122E, D123N, I135T, K173S, Q174K, D177E, V179I, T200A, I202V, Q207A, R211RS, V245Q, E248DA
Sanchez Onoro (2007)582659582659 NoneNone  K11T, T27S, V35T, T39N, E40D, K49R, I50IV, D123N, K173AS, Q174K, D177E, I178IV, V179VI, T200A, Q207A, R211S, V245Q, K281R, T286A, E291D, V292T, I293V, P294A, E297R, A304EA
Shang (2007)CNLN13CNLN13AY548274NoneNoneV75L V35T, E40D, E44G, K49R, V60I, I63M, K64R, D121H, K122E, D123S, E138D, Q145H, N147H, K173S, D177E, I178M, V179I, Q197PA
Vicenti (2007)551374574REF376882NoneNone  I5V, K11A, V35T, T39N, E40D, K49R, D121Y, K122E, E169D, K173T, Q174K, D177E, G196E, Q207A, R211SA
Vidal (2007)U180802BU.U1808AM260224NoneNone  K11T, V35T, E40D, K49R, K122E, D123N, A158AS, K173S, Q174K, D177E, V179I, Q207D, V245K, D250E, A272P, K281R, T286A, E291D, P294T, G335D, M357Q, G359A, T369A, A371V, A376T, T377R, A400T, T403M, E404DA
 U222602BU.U2226AM260240NoneNone  I5V, K11T, V35T, E40D, S48T, K104R, V118I, K122E, D123S, S163T, T165I, K173L, Q174K, D177E, V179I, G196S, T200I, Q207A, R211N, F214L, V245K, E248D, A272P, V276I, T286A, E291D, I293V, P294T, E312D, G335D, R356K, M357K, R358K, G359S, A360T, A371V, I375V, A376V, T377M, A400T, T403M, E404N, K431T, E432D, V435AA
 U312602BU.U3126AM260255NoneNone  V35T, E40D, V60I, K122E, D123G, I135T, K173L, Q174K, D177E, V179I, T200A, Q207E, R211K, V245Q, D250E, A272P, T286A, E291D, V292I, I293V, P294T, G335D, M357K, G359S, K366R, T369A, A371V, I375V, A376V, K388R, A400T, T403M, E404DA
von Wyl (2007)5610371527EF450011NoneNone  V35T, E40D, V60I, K64KR, K122E, D123S, I135T, K173S, Q174K, D177E, V179I, Q207E, R211SA
Chang (2008)TW3632aTW3632a NoneNone  V35T, E40D, V60I, K122E, D123S, I135T, K173S, Q174K, D177E, V179VI, T200TI, I202MV, Q207K, R211S, V245IMA
Land (2008)ML1990ML1990EU110092NoneNone  V35T, E40D, K49R, V60I, K122E, D123S, I135T, K173S, Q174K, D177E, V179I, T200A, Q207A, R211S, V245Q, D250E, E291D, V292I, I293V, P294T, E312D, I326M, G335D, M357K, G359S, K366R, T369A, A371V, I375V, A376V, T377M, A400T, E404D, E432D, V435A, D471E, Q480H, L491S, S519N, Q524K, K527E, E529D, A534S, A554KA
 ML2014ML2014EU110094NoneNone  V35T, E40D, K49R, V60I, D121H, K122E, I135T, K173S, Q174K, D177E, V179I, T200A, Q207A, R211S, V245Q, K249R, D250E, I257IV, T286A, E291ED, I293IV, P294T, E312DH, G335D, M357K, G359S, A360AT, K366R, A371V, I375V, A376V, T377M, A400T, T403M, E404D, E432D, V435E, F440Y, S468T, D471E, T477A, Q480H, L491S, K512R, S519N, Q524K, K527G, E529D, A534S, A554S, V559IA
Ndembi (2008)IAEM031IAEM031EU306763NoneNone  V21I, V35T, T39A, E40D, D123S, K173A, Q174K, D177E, V179I, T200A, Q207A, R211KA
 IAEM033IAEM033EU306764NoneNone  V35T, E40D, K49R, V60I, K122E, D123S, I135T, F171Y, K173S, Q174K, D177E, V179I, T200A, Q207A, R211SA
 IAEM039IAEM039EU306769NoneNone  K11T, V35T, E36D, E40D, K49R, V60I, K122E, D123N, I135T, E138G, T165I, K173T, Q174K, D177E, I178V, V179I, G196E, T200A, I202V, Q207A, R211S, F214LA
 IAEM054IAEM054EU306778NoneNone  V35T, E40D, I135T, K173S, Q174K, D177E, V179I, Q182R, T200E, Q207A, R211SA
 IAEM060IAEM060EU306781NoneNone  I5V, E6D, V35T, E40D, V60I, K122E, D123S, I135T, G141R, I142V, K173L, Q174K, D177E, V179T, I202V, Q207G, R211S, F214LA
 IAEM065IAEM065EU306784NoneNone  V35T, E40D, V60I, K122E, D123S, I135T, K173S, Q174K, D177E, V179I, T200A, Q207E, R211SA
Nyombi (2008)TBK024TBK024EU251730NoneNone  V35T, E40D, K49R, V60I, K122E, D123G, I135T, E169D, K173S, Q174K, D177E, I178M, V179I, G196E, I202V, Q207A, R211K, V245I, D250E, A272P, K277R, L283I, T286A, E291D, I293V, P294T, E312D, V317A, G335D, N348T, M357K, G359SA
 TBK056TBK056EU251750NoneNone  V35T, E40D, K49R, V60I, K122E, D123S, I135T, K173V, Q174K, D177E, V179I, T200A, Q207A, R211N, D250E, S251I, K281R, T286A, E291D, I293V, P294T, E297K, E312D, G335D, M357K, G359S, K366R, T369A, A371V, I375V, A376V, T377LA
 TMS001TMS001EU251782NoneNone  K11R, V35T, E40D, K49R, V60I, K122E, D123N, I135T, T139S, K173S, Q174K, N175H, D177E, V179I, T200A, Q207A, R211S, F214L, V245I, D250E, K281R, T286A, E291D, V292I, I293V, P294T, E297K, A327V, G335D, M357K, G359S, T369A, A371V, I375T, A376V, T377MA
 TMS002TMS002EU251783NoneNone  K11Q, V35T, T39M, E40D, I50V, V60I, V118I, D121H, K122E, D123S, I135T, K173L, Q174K, D177E, T200A, Q207A, F214L, I244V, A272P, K277R, T286A, I293V, P294T, G335D, M357K, G359S, T369AA
 TMS134TMS134EU251832NoneNone  K11T, K20R, V21I, V35T, T39K, E40D, D121H, K122E, D123S, I142V, T165I, K173S, D177E, V179I, Q207A, R211S, T286A, E291D, V292I, I293V, P294T, E312D, P321Q, D324E, G335D, M357K, R358K, G359SA
 TMS137TMS137EU251833NoneNone  K11T, K20R, V21I, V35T, T39K, E40D, D121H, K122E, D123S, I142V, T165I, K173S, D177E, V179I, Q207A, R211S, T286A, E291D, V292I, I293V, P294T, E312D, P321Q, D324E, G335D, M357K, R358K, G359S, K366R, T369V, A371V, I375V, A376V, T377MA
 TMS142TMS142EU251835NoneNone  V35T, T39A, E40D, K122E, D123N, I142V, K173S, Q174K, D177E, V179I, T200A, Q207A, R211S, K238R, E248D, A272P, K281R, E291D, I293V, P294T, E312D, G335D, R356K, M357K, G359S, A360AT, K366R, T369V, A371V, I375V, A376VA
Somi (2008)BG-05-746BG-05-746JQ616952NoneNone  V35T, E40D, K43R, K49R, V60I, K122E, D123N, I135T, K173L, Q174K, V179I, T200A, Q207A, R211SA
 OY-05-288OY-05-288JQ616969NoneNone  E28A, V35A, E40D, V60I, D121H, K122E, I135T, K173S, Q174K, D177E, I178L, V179I, V189I, Q207A, V245T, D250EA
 OY-05-271OY-05-271JQ616976NoneNone  V35T, E40D, K49R, K122E, D123S, I135T, S162C, T165I, K173A, Q174K, D177EG, Q207A, R211S, V245E, D250EA
Aghokeng (2009)CYR028CYR028GU191583NoneNone  V35T, E40D, K49R, K122E, D123N, I135T, K173S, V179I, E204EQ, Q207A, R211N, V245M, V276I, E291D, I293V, P294T, E312D, G335D, M357K, G359S, K366R, T369A, K374R, I375V, A376V, A400T, T403M, E404D, V417IA
 AV_0274AV_0274GU191655NoneNone  K20R, V35T, T39K, E40D, E53D, V60I, V106VI, T107S, V111VI, K122E, D123EQ, S162CF, D177E, I178L, E194EK, Q207E, R211RK, F214L, L228LH, E233EK, V245E, D250E, A272P, K277R, T286A, V292I, E297RA
 HG_0943HG_0943GU191658NoneNone  E6D, K11LS, V35T, T39N, E40D, K43KR, D123DN, K166R, K173S, D177E, Q197K, T200A, Q207D, V245Q, D250EK, G262GE, V276VI, K277KR, Q278QP, T286TA, V292I, I293V, E297Q, E312NT, I326V, G335DA
 HG_0130HG_0130GU191659NoneNone  K11T, V35T, T39K, E40D, K49R, D121H, K122E, D123G, K173L, D177E, G196K, Q207A, R211K, V245Q, T286A, E291D, V292I, I293V, E312D, G335DA
Bartolo (2009)CSE13501AOCSE135EU068355NoneNone  K11T, V35T, T39K, E40D, K122E, D123G, P150R, S162A, K173S, D177E, T200A, Q207N, V245Q, E248N, A272P, K281R, T286A, I293VA
Cuevas (2009)X2711_1X2711_1GU326181NoneNone  K20R, V35T, E40D, K49R, V60I, K122E, D123N, K173L, Q174K, D177E, V179I, T200A, Q207A, R211S, V245M, D250E, I274V, T286A, E291D, V292I, I293V, P294I, E312N, G335D, M357K, G359SA
Eshleman (2009)D27089W207-156927FJ389066NoneNone  E6D, V35T, T39A, E40D, V60I, V118VA, K122E, D123S, I135T, I142V, K173S, Q174K, D177E, V179I, Q207N, V245K, D250E, T286A, E291D, V292I, I293V, P294TA
 G08798W307-156948FJ389074NoneNone  V35T, E40D, K122E, D123N, I135T, K173L, Q174K, Q207E, R211S, F214L, V245E, D250E, V261I, K275R, V276I, T286A, E291D, I293V, P294TA
 K24111W107-156976FJ389083NoneNone  V35T, E40D, V60I, K122E, I135T, K173S, Q174K, D177E, V179I, Q207S, R211S, V245E, D250E, L282LF, L283I, I293V, P294AA
 B06769W207-156979FJ389085NoneNone  E6D, V35T, E40D, V60I, K122E, D123N, I135V, K173A, Q174K, D177E, V179I, Q207A, R211S, F214L, V245E, D250E, T286A, E291D, I293V, P294TA
 H37159W208-101504FJ389108NoneNone  K11T, K20R, V21I, V35T, E40D, V60I, K122E, D123N, K173S, D177G, Q207A, R211S, V245Q, E248N, T286A, E291D, V292I, I293VA
 J21783R908-101521FJ389115NoneNone  E6D, V35T, E40D, V60I, K122KE, D123N, I135V, K173A, Q174K, D177E, V179I, Q207A, R211S, F214L, V245E, D250E, T286A, I293V, P294TA
 E21593W308-101544FJ389118NoneNone  K11T, K20R, V21I, V35T, E40D, V60I, K122E, D123N, K173S, D177G, Q207A, R211S, V245Q, E248N, T286A, E291D, V292I, I293VA
Kousiappa (2009)CY057CY057EU673388NoneNone  K11T, V35T, T39K, E40D, K122E, D123S, A158S, K173L, Q174K, N175H, D177E, Q207A, R211S, V245M, E248D, A272P, K277R, T286A, E291D, V292I, I293V, P294T, D324E, I326V, Q334PA
 CY171CY171EU673403NoneNone  K11A, V35T, E36D, T39N, E40D, V60I, K122E, D123S, I135T, K173L, Q174K, D177E, T200TI, Q207AT, R211S, V245IK, E248D, A272P, T286A, E291D, V292I, I293V, P294T, I326VA
Mintsa-Ndong (2009)MKK248MKK248AM903432NoneNone  K11T, V35T, T39N, E40D, K49R, K122E, D123G, K173S, D177E, Q207N, V245QA
Thomson (2009)915_1007RU_915_1007FJ009719NoneNone  K11T, V35T, E36D, T39N, E40D, K122E, D123S, K173L, Q174K, D177E, T200TI, Q207AD, R211S, V245T, E248D, A272P, T286A, E291D, V292I, I293V, P294TA
Vercauteren (2009)pt2078839276430GQ398946NoneNone  K30Q, K32G, A33C, L34T, V35L, E36N, I37F, E40D, V60I, K102Q, K122E, D123N, F171Y, K173A, Q174K, D177E, V179I, Q197L, T200A, Q207A, R211N, V245QA
 pt2059930282707GQ398965NoneNone  K11T, V35T, E40D, K49R, V60I, D121H, K122E, D123S, I135T, E138A, K173S, Q174K, D177E, V179L, T200A, Q207A, E248D, A272P, K281R, L283I, T286A, E291D, V292I, I293V, P294T, E312DA
 pt15014262857598GQ399523NoneNone  E36K, I37F, E40D, I50L, V60I, K122E, I135T, K173S, Q174K, D177E, V179I, T200A, Q207A, R211S, V245KA
 pt14324663774098GQ399592NoneNone  K30Q, K32G, A33C, L34T, V35L, E36N, I37F, E40D, K49R, V60I, K122E, D123N, I135T, K173S, Q174K, D177E, T200A, Q207D, R211S, F214L, V245KA
 pt13325234413600GQ399692NoneNone  E36K, I37F, E40D, K49R, V60I, K122E, D123N, I135T, K173S, Q174K, V179I, Q207A, R211S, V245KA
 pt13025399654061GQ399722NoneNone  E36K, I37F, E40D, V60I, G99A, K122Q, I135T, K173V, Q174K, D177E, V179I, Q207A, R211S, V245IA
 pt12115962214103GQ399813NoneNone  K32G, A33C, L34T, V35L, E36K, I37F, E40D, V60I, K122E, D123N, I135T, K173S, Q174K, D177E, V179I, T200E, Q207T, R211S, F214L, V245KA
 pt11136548025931GQ399911NoneNone  E6D, V21I, V35T, E40D, V60I, K122E, D123N, I135T, E138A, S162H, K173I, Q174K, V179I, Q207A, R211N, V245E, D250E, K281R, T286A, E291D, V292I, I293V, P294T, E312N, I329VA
 pt11016578125797GQ399923NoneNone  V35T, E36A, T39E, E40D, K43R, S48E, D123N, S162C, K173S, Q174K, D177E, Q207A, R211S, K281R, E291D, I293V, P294T, E312DNA
 pt9467577549413GQ400078NoneNone  K30Q, K32G, A33C, L34T, V35L, E36N, I37F, T39A, E40D, V60I, K122E, D123N, I135T, K173S, Q174K, D177E, V179I, T200E, Q207T, R211S, F214L, V245KA
 pt8837919903120GQ400141NoneNone  E36K, I37F, T39A, E40D, E44G, V60I, F87V, K122E, D123N, I135T, K173S, Q174K, D177E, V179T, T200E, Q207T, R211S, F214L, V245K, L246SA
 pt5019909712185GQ400523NoneNone  V35T, E40D, K43R, K49R, V60I, K122E, D123G, K173S, Q174K, D177E, V179I, T200A, Q207A, R211S, V245M, D250E, T286A, E291D, V292I, I293V, P294T, E312DA
 pt309KO77cU6lrqGQ400715NoneNone  K11S, V35T, E40D, S48T, K49R, V60I, K122E, D123N, I135T, K173S, Q174K, D177E, V179I, T200A, Q207AD, R211RKA
 pt272M84cPMYKg3GQ400752NoneNone  E6ED, K11KNT, V35T, E40D, K49R, K122E, D123G, K173S, Q174QK, D177E, V179I, Q207A, R211S, V245Q, L283LI, I293V, P294A, E312ED, G335DA
Burda (2010)06LPH19CM06LPH19CMGQ344999NoneNone  E6K, K11V, L12S, V35T, E40D, K102Q, V118I, K122E, D123N, I135T, T139L, S162A, K173S, V179IA
Carr (2010)1445MV01CM.1445MVGU201516NoneNone  V35T, T39K, E40D, D121Y, K122E, I142V, T165I, K173T, Q174K, D177E, V179I, T200A, Q207A, V245K, K275Q, K281R, T286A, E291D, V292I, I293V, E297R, A304E, E312N, I326T, G335D, R356K, M357K, G359T, A360T, A376V, T377M, K390R, A400T, K431Q, V466I, D471E, K476R, Q480H, H483Y, L491S, K512R, S519N, Q524E, K530R, V531I, A534S, A554SA
Djoko (2010)624CD3729FR666624NoneNone  K11T, V35T, E40D, K49R, K122E, D123S, I142IV, A158S, K173S, D177E, V179I, Q207AS, R211RS, V245E, K281R, I293V, P294T, E312N, G335D, M357K, G359S, A360T, T369AA
 628CD0062FR666628NoneNone  K11T, K20R, K22KN, V35T, T39K, E40D, V60I, D121H, K122E, D123S, I135T, A158S, K173S, Q174R, D177E, G196E, Q207A, R211S, V245Q, D250E, T286A, I293V, E297R, A304E, E312D, Q334H, M357K, G359S, K366R, T369VA
 634CD4617FR666634NoneNone  E6K, K11T, V35T, T39N, E40D, K122E, D123G, T139V, K173S, T200TA, Q207N, V245Q, A272P, K277R, T286A, I293V, E297K, E312D, I326V, M357K, G359S, T369IA
 660CD2743FR666660NoneNone  I5IL, T27S, V35T, E36A, T39D, E40D, K122E, D123N, I142V, E169D, K173V, Q174K, D177E, I178L, V179I, G196E, T200A, Q207T, V245Q, E248D, A272S, Q278N, T286A, E291D, I293V, P294T, K311R, I326V, G335D, R356K, M357R, R358G, G359S, K366R, T369A, E370QA
Mosha (2010)S8PolS8PolJQ071456NoneNone  V35T, E40D, V60I, V118G, K122E, D123S, I135T, S162Y, K173S, Q174K, D177E, V179I, Q207A, R211S, V245E, D250E, T286A, E291D, V292I, I293V, P294T, E312T, G335D, M357K, G359S, K366R, T369A, I375V, A376T, T377M, T386A, A400T, T403M, E404DA
 S23PolS23PolJQ071469NoneNone  V35T, T39TI, E40D, V60I, K122E, D123S, E138Q, S162C, K173S, Q174K, V179I, Q207A, R211S, V245I, D250E, A272P, T286A, E291D, V292I, I293V, P294PT, E312D, I326V, G335D, R356EK, M357R, R358K, G359S, E370D, A371AV, I375V, T377TA, T386TA, K390KR, A400T, T403M, E404DA
 S28PolS28PolJQ071473NoneNone  V35T, T39TA, E40D, K49KR, V60I, K122E, D123S, I135IT, E138EA, T139TS, K173A, Q174K, D177DN, I178IM, V179I, T200A, Q207A, R211S, V245Q, E248DN, A272P, T286A, E291D, I293V, P294T, K311KR, S322SA, Q334QL, G335D, M357K, R358Q, G359S, K366R, E370A, A371V, I375V, A376V, T377M, A400T, T403M, E404DA
 S47PolS47PolJQ071479NoneNone  V35T, E40D, V60I, K122E, I135T, E138A, K173S, Q174K, D177E, I178M, V179I, Q207A, R211S, F214FL, V245K, D250E, T286A, E291D, V292I, I293V, E312D, Q334D, G335D, M357K, G359S, K366R, A371V, I375V, A376V, T377L, K390R, A400T, T403M, E404DA
 S72PolS72PolJQ071489NoneNone  E6D, V35T, E40D, K49KR, V60I, K122E, D123S, K173LS, Q174K, D177E, T200A, Q207A, R211S, D250E, T286A, E291D, V292I, I293V, P294T, E312D, I326IV, G335D, M357K, R358RK, G359S, K366KR, A371V, I375V, T377M, E399ED, A400T, T403M, E404DA
 S73PolS73PolJQ071490NoneNone  V35T, T39A, E40D, E53D, K102KR, K122E, D123S, I135T, K173L, Q174K, D177E, V179I, T200TI, I202V, Q207AD, R211K, E248D, T286A, E291D, V292I, I293V, P294T, E312D, G335D, Q340P, A376T, A400T, T403KA
Tovanabutra (2010)KECst_007KECst_007FJ623476NoneNone  V35T, T39A, E40D, V60I, D121Y, K122E, I135T, K173S, Q174K, D177E, V179I, G196R, I202V, Q207A, F214L, V245K, K281R, T286A, E291D, V292I, I293V, P294S, E312D, G335D, M357R, G359S, A371V, I375V, A376V, T377L, E399D, A400I, T403M, E404D, E432D, V435E, N447Q, L452I, D471E, Q480H, H483Y, L491S, L503I, K512R, L517V, S519N, Q524K, K527G, E529D, V548I, A554SA
 KECst_021KECst_021FJ623477NoneNone  K11Q, V35T, T39A, E40D, S48T, V60I, D121H, I135T, K173L, Q174K, D177E, V179I, T200A, Q207A, R211S, V245E, K281R, T286A, E291D, I293V, P294T, P313T, V317A, G335D, M357K, G359S, K366R, T369A, A371V, I375V, A376V, T377L, A400T, T403M, E404D, E432D, V467I, T470P, D471E, Q480H, L491S, K512R, L517I, S519N, Q524K, K527E, E529D, A534S, A554SA
Towler (2010)11337194-AHM037814NoneNone  V35T, T39K, E40D, K49R, V60I, K122E, I135T, T165I, K173L, Q174K, D177E, V179I, G196GE, T200A, I202V, Q207A, R211S, F214L, V245E, D250E, K281KR, T286TA, E291D, I293V, P294TA
 439552-J439552-JHM037829NoneNone  E6D, V35T, E40D, K49R, V60I, K122E, D123S, K173S, Q174K, D177E, V179I, T200A, Q207A, R211S, V245Q, D250E, K281R, T286A, E291D, I293V, P294T, E312DA
 318244-S318244-SHM037837NoneNone  E6K, K11T, E29D, V35T, E40D, K122E, D123S, S162H, K173A, D177E, V179I, Q207A, R211S, F214FL, V245Q, A272V, E291D, I293V, P294T, E312DA
 328958-W328958-WHM037847NoneNone  V35T, T39A, E40D, L80LF, K122E, D123S, I135T, K173S, Q174K, D177E, V179I, T200A, Q207A, R211S, F214L, V245Q, T286A, E291D, V292I, I293V, P294PT, I326TA
 393958-V393958-VHM037867NoneNone  K20R, V21I, V35T, T39A, E40D, V60I, K122E, D123N, F130L, T131P, I132*, I135T, K173S, Q174K, D177E, I178V, V179I, D185DN, Q207E, R211RK, V245E, D250E, K281R, T286A, E291D, I293V, P294T, E312DA
 427986-C427986-CHM037874NoneNone  E6D, V35T, E40D, K49KR, V60I, K122E, D123S, I135T, K173L, Q174K, D177E, V179I, T200A, Q207A, R211S, V245E, D250E, A272S, K277R, T286A, E291D, I293V, P294I, E312D, V317AA
Yang (2010)20106934512010693451JQ616890NoneNone  V35T, T39N, E40D, K43R, S162C, K173T, D177E, T200A, Q207E, R211K, V245E, E248NTA
Charpentier (2011)patng_19patng_19HQ021249NoneNone  V35T, T39A, E40D, K102Q, K122E, D123N, I135K, I142IL, S162H, K173ST, V179I, Q207A, V245QA
Hamers (2011)CP076301581CP076301581HQ993620NoneNone  E28A, K32Q, V35T, T39K, E40D, I50V, V60I, V118I, K122E, D123S, I135T, A158S, T165I, K173S, Q174K, D177E, V179I, T200A, Q207A, R211S, F214L, V245E, T286A, I293V, P294TA
 CP076301583CP076301583HQ993621NoneNone  K11KT, K20R, V21VI, V35T, E40D, V60I, K122E, D123N, I135T, S162A, K173S, Q174K, D177E, V179I, T200A, Q207A, R211S, V245K, D250E, K281R, T286A, I293V, E297EKA
 CP076301597CP076301597HQ993635NoneNone  E6D, V35T, T39A, E40D, S48T, V60I, K122E, D123S, I135T, K173S, Q174K, D177E, V179I, I202V, Q207A, R211S, V245K, D250E, S251H, T286A, E291D, V292I, I293V, P294T, E312DA
 CP076301598CP076301598HQ993636NoneNone  V35T, T39A, E40D, V60I, D121H, K122E, D123E, I135T, I142V, K173AS, Q174K, D177E, I178IMV, V179VI, T200TA, Q207A, R211S, V245M, D250E, A272AP, T286A, E291D, V292I, I293V, P294T, E312NA
 CP076301605CP076301605HQ993642NoneNone  E6D, V35T, T39A, E40D, S48T, V60I, K122E, D123S, I135T, K173S, Q174K, D177E, V179I, I202V, Q207A, R211S, V245K, S251H, T286A, E291D, V292I, I293V, P294T, L295M, E312DA
 CP076301610CP076301610HQ993647NoneNone  K11T, V35T, E40D, K49R, V60I, K122E, D123N, I135T, K173T, Q174K, D177E, V179I, Q207A, R211N, V245Q, D250E, A272P, E291D, V292I, I293V, P294T, E312D, V317AA
 CP076301616CP076301616HQ993652NoneNone  K20R, V35T, E40D, K49R, V60I, K122E, D123N, I135T, T165I, K173A, Q174K, D177E, V179I, T200A, Q207A, R211K, V245I, D250E, T286A, E291D, V292I, I293VA
 CP076301684CP076301684HQ993680NoneNone  P4S, K11T, K20R, V21I, V35T, T39A, E40D, K122E, D123N, K173L, Q174R, D177E, V179I, I202V, Q207A, R211K, V245T, D250E, K277R, T286A, E291D, V292I, I293V, P294T, R307S, E308F, I309F, L310I, E312D, Y319C, D324E, L325IA
 CP076301687CP076301687HQ993683NoneNone  E6D, V35T, E40D, K49R, V60I, K122E, D123N, I135IT, K173A, Q174K, D177E, I178MV, V179I, Q207A, V245E, D250E, S268C, A272P, T286A, E291D, V292I, I293V, P294T, K311R, I326M, I329VA
 CP076301690CP076301690HQ993686NoneNone  E6D, K20R, V35T, E40D, K43KR, V60I, K122E, K173S, Q174K, D177E, V179I, T200TAEK, Q207A, R211S, F214L, V245E, D250E, A288AS, E291D, V292I, I293V, P294TA
 CP076301708CP076301708HQ993703NoneNone  E6D, V35T, T39TI, E40D, V60I, K122E, D123N, I135T, K173S, Q174K, V179I, T200A, I202V, Q207N, R211S, V245K, D250E, S251V, V261VI, K281KR, T286A, E291D, V292I, I293V, P294T, E312D, S322A, G335DA
 CP076301734CP076301734HQ993724NoneNone  K11T, V21I, Q23K, V35T, T39K, E40D, K49R, V60I, K102Q, K122E, D123NS, K173S, V179I, T200A, I202V, Q207A, R211RK, V245Q, E248D, A272P, T286A, E291D, I293V, P294T, E312DA
 CP076301741CP076301741HQ993731NoneNone  E6D, E28A, V35T, T39N, E40D, V60I, D121H, K122E, I135T, K173S, Q174K, D177E, I178IM, T200A, I202V, Q207A, R211S, V245D, D250E, A272P, T286A, E291D, I293V, P294T, E308F, I309X, E312D, E328R, I329K, Q330Y, Q332KA
 CP076301742CP076301742HQ993732NoneNone  V35T, T39TA, E40D, K49R, V60I, K122E, D123N, I135T, I142V, K173T, Q174QR, D177E, T200A, Q207A, R211RS, V245Q, K281R, E291D, K311R, E312NA
 CP076301749CP076301749HQ993738NoneNone  V35T, E40D, K49R, V60VI, E79EK, K122E, D123N, I135T, S162C, E169D, K173A, Q174K, D177E, G196E, T200TA, Q207A, R211S, K281R, T286A, E291D, I293V, P294T, E297K, S322AA
 CP076301760CP076301760HQ993748NoneNone  V35M, T39KN, E40D, K122E, D123S, I178IM, Q207E, R211K, V245K, V261I, A272P, K275Q, K281R, T286A, E291D, V292I, I293V, P294T, E297K, A304EA
 CP076302253CP076302253HQ993767NoneNone  V21I, V35T, T39A, E40D, K49R, V60I, T69S, K122E, I135T, I142V, K173S, Q174K, D177E, V179VI, T200A, Q207E, R211AGST, F214FL, V245E, D250E, T286A, E291D, V292I, I293VA
 CP076301640CP076301640HQ993786NoneNone  V35T, E40D, K49R, V60I, K64KR, D121Y, K122E, I135T, S162A, K173S, Q174K, D177E, V179I, T200AE, Q207A, R211K, F214FL, V245K, D250E, K277KR, K281KR, T286A, E291D, V292I, I293V, P294T, G335DA
 CP076302204CP076302204HQ993809NoneNone  V35T, E40D, K49R, K122E, D123N, I135T, I142V, K173S, D177E, V179I, T200A, Q207A, R211RS, V245Q, K281R, T286A, E291D, I293V, E312DA
 CP076302249CP076302249HQ993820NoneNone  V35T, E40D, K49KR, V60I, D121H, K122E, I135T, K173A, Q174K, D177E, V179I, Q207A, R211S, F214FL, V245E, D250E, T286A, E291D, V292VI, I293V, P294AITV, E312EDA
 CP076302250CP076302250HQ993821NoneNone  V35T, E40D, V60I, G99GS, T107S, D121H, K122E, S162A, K173S, Q174K, D177E, G196E, T200A, Q207A, R211NS, D250E, S251T, T286A, E291D, V292I, I293V, P294T, E297R, A304E, E312D, V317A, D324EA
 CP076302299CP076302299HQ993846NoneNone  V35T, E40D, V60I, K64KR, D121H, K122E, I135T, K173L, Q174K, D177E, V179I, T200TA, E203ED, Q207A, R211S, V245I, D250E, T286A, E291D, V292I, I293V, P294T, E312D, V317AA
 CP076302315CP076302315HQ993857NoneNone  E6D, V35T, E40D, V60I, K122E, D123S, I135IT, S162A, K173S, Q174K, D177E, V179I, T200TA, Q207A, R211NS, D250E, S251Q, A272Q, K275Q, K281R, E291D, V292I, I293V, P294T, E312RS, S322TA
 CP076302334CP076302334HQ993874NoneNone  V21I, V35T, T39A, E40D, V60I, K122E, D123S, I135T, S162SAGT, T165TI, F171Y, K173S, Q174K, D177E, I178IM, T200TA, I202V, Q207A, R211S, F214L, I244V, V245T, D250E, A272P, K281R, T286A, E291D, V292I, I293V, P294T, V317EA
 CP076304139CP076304139HQ993875NoneNone  V35T, E40D, V60I, K122E, D123S, I135T, S162A, K173A, Q174K, D177E, G196V, T200A, Q207A, R211N, V245K, D250E, T286A, E291D, V292I, I293IV, P294TA
 CP076304140CP076304140HQ993876NoneNone  V35T, E40D, K43KR, K49KR, V60I, K122E, D123N, I135T, K173S, Q174K, D177E, V179I, T200A, Q207A, R211S, V245M, D250E, A272S, L283I, E291D, I293V, P294T, L295M, E312DA
 CP076304177CP076304177HQ993892NoneNone  P4PS, I5IV, E6EK, K20R, V21I, E28EK, K32KE, V35T, T39TK, E40D, V60I, K122E, I135T, K173S, Q174K, D177E, I178IV, V179IT, T200A, I202V, Q207A, R211S, F214FL, V245Q, E248D, D250E, T286A, E291D, I293V, P294T, E312DA
 CP076304194CP076304194HQ993899NoneNone  V35T, E36A, T39E, E40D, V60I, K122E, D123G, I135T, I142V, K173S, Q174K, D177E, V179I, T200TA, Q207DE, R211K, V245E, D250E, V254I, A272S, R284K, T286A, E291D, V292I, I293V, E312NA
 CP076304197CP076304197HQ993901NoneNone  P4H, V35T, E40D, S48ST, V60I, D121H, K122E, I135R, S162Y, K173L, Q174K, D177E, I178M, V179I, Q207A, R211S, V245E, D250E, T286A, E291D, V292I, I293V, P294TA
 CP076304223CP076304223HQ993918NoneNone  V35T, E36ED, E40D, V60I, K122E, D123S, I135T, S162Y, K173S, D177E, I178L, V179I, V189VI, T200A, Q207A, R211S, A272P, K275KR, Q278HN, K281KR, L282C, T286A, V292IA
 CP076304224CP076304224HQ993919NoneNone  K20R, V35T, T39A, E40D, V60I, K122KE, I135T, K173S, Q174K, D177E, V179I, G196E, Q197EK, T200TA, Q207AS, R211S, F214L, V245VI, D250E, K275Q, T286A, E291D, V292I, I293V, E312HA
 CP076304225CP076304225HQ993920NoneNone  V35T, E40D, K43R, V60I, K122E, D123S, I135T, K173LS, Q174K, D177E, V179I, T200A, Q207A, R211S, V245KQ, D250E, A272P, K277R, T286A, E291D, V292VI, I293V, P294AT, K311KR, E312D, V317VAA
 CP076304262CP076304262HQ993950NoneNone  I5V, E6Q, K11T, K20R, V35T, E40D, K122E, D123S, I142V, S163T, K173S, D177EG, T200K, I202V, Q207A, R211K, V245Q, E248N, T286A, E291D, I293V, P294T, E312D, E328DA
 CP076304263CP076304263HQ993951NoneNone  E6T, V35T, E40D, V60I, K122E, D123S, I135T, K173A, Q174K, D177E, V179I, Q207A, R211S, D250E, S251D, A272P, K281R, T286A, E291D, V292T, I293IV, P294I, E297K, A304E, S322TA
 CP076304266CP076304266HQ993954NoneNone  K20KR, V35T, E40D, V60I, D121H, K122E, I135T, T165TI, K173E, Q174R, D177DE, V179I, Q207A, R211S, V245E, D250E, S251H, K277R, T286A, E291D, V292I, I293V, P294T, E312N, E328DA
 CP076304282CP076304282HQ993967NoneNone  K11KT, V35T, T39A, E40D, K122E, D123N, I135T, I142V, K173S, Q174K, D177E, V179I, T200TA, Q207A, R211S, V245K, A272P, K277R, L282C, I293V, P294SA
 CP076300740CP076300740HQ994930NoneNone  K11T, K20R, V21I, V35T, T39A, E40D, K122E, D123N, I135T, K173L, D177E, V179I, I202V, Q207A, R211K, V245Q, E248D, T286A, E291D, P294TA
 CP076301854CP076301854HQ994995NoneNone  E6K, K11T, V35T, E40D, K43R, E44G, K122E, D123S, I135IT, K166KR, K173I, Q174K, D177E, I178L, V179I, I202V, Q207K, R211S, F214L, V245E, D250E, A272P, K277R, T286A, E291ED, I293V, P294T, E312DA
 CP076301875CP076301875HQ995007NoneNone  E6D, V8I, V35T, E40D, K49R, V60I, K122E, D123S, I135T, K173S, Q174K, D177E, T200A, Q207A, R211S, V245E, D250E, A272P, K275Q, T286A, E291D, I293V, P294TA
 CP076302068CP076302068HQ995029NoneNone  K11T, K20R, V35T, T39K, E40D, K43R, K173S, Q174K, D177E, V179I, T200A, I202V, Q207A, R211G, F214L, V245Q, E248D, K281R, T286A, E291D, V292I, I293V, E312NA
 CP076302072CP076302072HQ995032NoneNone  K11T, K20R, V21I, V35T, T39K, E40D, K122E, D123N, K173S, D177E, I178V, V179I, T200A, I202V, Q207A, R211G, V245Q, E248D, K277R, K281R, T286A, E291D, V292I, I293VA
 CP076302991CP076302991HQ995063NoneNone  E6D, V35T, E40D, K49R, I50V, V60I, K122E, D123S, I135T, S162H, K166Q, K173A, Q174K, D177E, V179I, Q207A, R211S, V245E, D250E, K277R, T286A, E291D, I293V, P294TA
 CP076303002CP076303002HQ995070NoneNone F227LE6K, K11T, V35T, E40D, K82KR, K122E, D123N, K173AS, V179I, Q207A, R211S, F214L, V245E, D250E, E291D, I293V, P294T, E312DA
 CP076303014CP076303014HQ995079NoneNone  V35T, T39A, E40D, K122E, D123NS, K173A, Q174K, D177E, V179I, T200A, Q207E, R211K, F214L, V245K, D250E, A272P, L283I, I293V, P294AA
 CP076300728CP076300728HQ995099NoneNone  V35T, E40D, V60I, D121H, K122E, I135T, E138A, K173AS, Q174K, D177E, I178L, V179I, G196GE, T200A, I202V, Q207N, R211S, F214L, V245M, D250E, T286A, E291D, I293V, P294TA
 CP076300835CP076300835HQ995110NoneNone  V35T, E40D, V60I, K122E, D123S, K166R, K173L, Q174K, D177E, I178M, V179I, T200A, Q207A, R211S, V245E, A272P, K277R, T286A, E291ED, V292I, I293VA
 CP076300847CP076300847HQ995114NoneNone  E6D, K11Q, K20R, V35T, T39A, E40D, V60I, V118I, K122E, D123N, I135T, K173L, Q174K, D177E, V179I, Q207A, R211S, F214L, V245Q, E248D, T286A, E291D, I293V, P294TA
 CP076300857CP076300857HQ995121NoneNone  E6D, V35T, E40D, K49R, V60I, K122E, D123S, I135T, E169ED, K173S, Q174R, D177E, V179I, T200A, Q207A, R211S, V245E, D250E, A272P, K281R, T286A, I293V, P294TA
 CP076300868CP076300868HQ995127NoneNone  K11Q, V35T, E40D, V60I, D121DY, K122E, D123G, I135T, K173A, Q174K, D177E, V179I, T200A, Q207A, R211S, D250E, T286A, E291D, V292I, I293V, P294TA
 CP076300878CP076300878HQ995133NoneNone  E28EG, V35T, E40D, V90VI, K104KR, K122E, D123NS, K173S, Q174QK, T200AE, Q207A, R211K, V245Q, K281R, T286A, E291D, V292I, I293V, L310*A
 CP076301815CP076301815HQ995159NoneNone  V35T, T39A, E40D, K122E, D123NS, K173A, Q174K, D177E, V179I, T200TA, Q207E, R211K, F214L, P243PS, V245K, D250E, A272P, L283I, I293V, P294AA
 CP076301818CP076301818HQ995160NoneNone  V35T, E40D, K49R, V60I, K122E, D123N, K173L, Q174K, D177E, V179I, Q207A, P243S, V245K, E248D, D250E, A272S, V276I, K277R, Q278N, L283I, T286A, E291D, V292I, I293V, P294TA
 CP076301833CP076301833HQ995166NoneNone  K11T, K20R, V21I, V35T, T39R, E40D, K43E, K49R, V60I, D121H, K122E, K173S, Q174K, D177E, I202V, Q207A, R211N, V245Q, E248D, A272P, T286A, E291D, V292I, I293V, P294TA
 CP076302054CP076302054HQ995204NoneNone  E6D, K11Q, K20R, V35T, T39A, E40D, V60I, V118I, K122E, D123N, I135T, K173L, Q174K, D177E, V179I, Q207A, R211S, F214L, V245Q, E248D, T286A, E291D, I293V, P294TA
 CP076302066CP076302066HQ995206NoneNone  E6D, K20KR, V35T, E40D, K49R, V60I, K122E, D123S, I135T, E169ED, K173S, Q174R, D177E, V179I, T200A, Q207A, R211S, V245E, D250E, A272P, K281R, T286A, I293V, P294TA
 CP076303038CP076303038HQ995223NoneNone  E6K, K11T, V35T, E40D, K122E, D123N, K173A, V179I, Q207A, R211S, F214L, V245Q, A272P, K275Q, V276I, E291D, I293V, P294TA
 CP076303052CP076303052HQ995234NoneNone  E6D, V35T, E40D, K49R, I50V, V60I, K122E, D123S, I135T, T165I, E169D, K173A, Q174K, D177E, V179I, G196E, T200TA, Q207A, R211K, V245E, D250E, A272AP, K277R, T286A, I293V, P294TA
 CP076303063CP076303063HQ995243NoneNone  E6D, K20R, V35T, T39TA, E40D, V60I, D123E, K166KR, K173L, Q174KR, D177E, V179I, T200TA, Q207A, R211S, V241I, V245E, D250E, A272S, T286A, E291D, V292VI, I293V, P294PTA
 CP076303082CP076303082HQ995259NoneNone  P4T, K20R, V21I, V35T, T39A, E40D, P52R, V60I, K122E, D123S, T165I, E169D, K173S, Q174R, D177E, I178L, T200A, I202V, Q207E, R211K, V245Q, E248D, A272P, K281R, T286A, E291D, I293V, P294TA
 CP076303126CP076303126HQ995300NoneNone  V35T, E40D, K49R, V60I, K122E, D123S, T139K, S163T, T165I, K173Q, Q174K, N175NH, D177DE, V179I, T200A, Q207A, R211K, F214FL, V245Q, E248V, D250E, K281R, T286A, E291D, I293V, P294TA
 CP076303134CP076303134HQ995306NoneNone  K11T, V35T, E40D, I50V, V60I, K122E, D123G, I142V, K173T, D177E, V179I, T200A, I202V, Q207A, R211S, V245Q, A272P, K277R, I293V, P294T, L295MA
 CP076300715CP076300715HQ995317NoneNone  K20R, V35T, E40D, V60I, V118I, D121H, K122E, I135T, E138A, K173A, Q174R, D177E, I178V, V179I, Q207A, R211S, V245K, A272P, K277R, T286A, E291D, V292I, I293V, P294TA
 CP076300737CP076300737HQ995326NoneNone  K11T, K20R, V21I, V35T, T39K, E40D, K49R, V60I, K122E, D123GS, E138A, K173S, Q174K, V179I, Q197QP, I202V, Q207E, R211K, V245Q, E248N, A272P, K281KR, T286A, E291D, V292I, I293IVA
 CP076300739CP076300739HQ995327NoneNone  E6N, K20R, V35T, T39A, E40D, K49R, I50V, V60I, K104R, K122E, D123NS, I135T, S162A, K173L, Q174K, D177E, Q207E, R211K, V245Q, K281R, I293V, P294TA
 CP076300755CP076300755HQ995331NoneNone  K11T, K20R, V21I, V35T, T39R, E40D, K122E, D123NS, S162A, K173S, D177E, V179I, I202V, Q207A, R211K, V245Q, E248D, K281R, T286A, E291D, V292I, I293V, P294T, L295MA
 CP076300756CP076300756HQ995332NoneNone  P4S, E6S, K11T, K20R, V21I, V35T, T39A, E40D, K122E, D123G, S162A, K173S, Q174K, D177E, V179I, I202V, Q207A, R211S, V245Q, E248D, T286A, E291D, V292I, I293VA
 CP076300762CP076300762HQ995334NoneNone  V35T, E40D, V60I, D121H, K122E, D123E, I135T, I142V, K173S, Q174K, D177E, V179I, T200A, Q207A, R211S, D250E, S251D, A272P, T286A, A288AT, E291D, V292I, I293V, P294TA
 CP076300770CP076300770HQ995339NoneNone  K11T, K20R, V21I, V35T, T39K, E40D, K49R, V60I, K122E, D123GS, E138A, K173S, Q174K, V179I, I202V, Q207E, R211K, V245Q, E248N, A272P, K281R, T286A, E291D, V292I, I293VA
 CP076300774CP076300774HQ995342NoneNone  I5V, E6D, T27S, K32R, V35T, T39S, E40D, K122E, D123S, I142V, S162C, K173S, Q174K, D177E, I178L, V179T, T200A, Q207D, R211K, V245T, D250E, T286A, E291D, I293V, E312TA
 CP076300781CP076300781HQ995347NoneNone  K11KT, V35T, E40D, K49R, V60VI, K122E, D123S, I135IT, K173L, D177E, V179I, T200A, Q207A, R211S, V245Q, K281R, E291D, I293V, P294TA
 CP076301891CP076301891HQ995370NoneNone K103NP4T, E6D, V35T, E40D, V60I, K122E, D177DE, I178IMV, T200A, Q207D, R211K, V245Q, A272P, Q278H, T286A, I293V, L295RA
 CP076301904CP076301904HQ995380NoneNone  E6S, V35T, E40D, V60I, K102Q, K122E, D123N, I135T, K173A, Q174K, D177E, V179I, Q207E, R211S, I244V, V245K, D250E, A272P, K281R, L283I, I293V, P294T, K311RA
 CP076301906CP076301906HQ995381NoneNone  I31IK, V35T, T39A, E40D, K49R, V60I, K122E, D123N, I135T, I142V, K173IL, Q174K, D177E, V179I, Q207A, R211S, V245E, D250E, E291D, V292I, I293V, P294TA
 CP076301911CP076301911HQ995386NoneNone  E6S, V35T, E40D, V60I, K102Q, K122E, D123N, I135T, K173A, Q174K, D177E, V179I, I195IL, Q207E, R211RS, I244V, V245K, D250E, A272P, K281R, L283I, I293V, P294T, K311RA
 CP076301926CP076301926HQ995397NoneNone  V35T, E40D, V60I, K122E, D123N, I135T, S162C, K173S, Q174K, D177E, V179I, T200TA, Q207A, R211S, E248D, K249Q, D250E, K275Q, V276T, T286A, I293V, P294TA
 CP076301938CP076301938HQ995404NoneNone  K11AT, T27TS, V35T, E40D, K49KR, K122E, D123N, K173LS, Q174EK, D177E, V179I, T200A, Q207A, R211S, V245Q, K277R, E291D, I293V, P294AA
 CP076301962CP076301962HQ995426NoneNone  V35T, T39A, E40D, V60I, K122E, D123S, I135T, K173S, Q174K, D177E, V179I, T200A, I202V, Q207D, R211S, V245K, D250E, A272P, K277R, L282C, L283I, I293VA
 CP076302924CP076302924HQ995482NoneNone  V35T, E40D, K49R, I50M, V60I, K122E, D123S, I135T, K173I, Q174K, V179I, Q207A, R211S, V245K, D250E, A272P, K277R, T286A, I293V, P294T, E312DA
Kasang (2011)33133313HM572370NoneNone  K32KR, V35T, E40D, K49R, V60I, K122E, D123S, I135T, K173S, Q174K, D177E, V179I, T200A, Q207A, R211S, V245M, D250E, S268C, K275Q, K281K*, T286TA, E291D, V292VI, I293V, P294T, E298EK, E312NA
 2974429744HM572377NoneNone  K11T, K20R, K22R, V35T, E40D, K49R, V60I, K122E, D123N, I135T, K173S, Q174K, D177E, T200A, Q207A, R211N, A272P, K277R, L282C, L283I, R284K, I293V, K311R, D324E, I326LA
 20292029HM572381NoneNone  K11T, K20R, V35T, E40D, V60I, D121H, K122E, D123S, I135T, K173A, Q174K, D177E, V179I, T200TI, Q207G, R211S, I244V, D250E, S251N, T286A, E291D, V292I, I293V, P294T, E312D, I326IV, I329IVA
 3264632646HM572389NoneNone  K11T, V35T, E40D, K122E, D123S, I135T, K173L, Q174K, D177E, V179I, T200A, Q207A, R211S, F214L, V245Q, E248N, D250E, A272S, K281R, T286A, I293V, P294T, L295M, E312D, V317A, I326VA
 60156015HM572394NoneNone  K11T, K20R, V21I, V35T, T39KR, E40D, K46KR, K64KR, K122E, D123N, K173S, D177E, V179I, I202V, Q207A, R211S, V245Q, E248N, E291D, I293V, P294T, E312DN, V317VAA
Ndembi (2011)NTCPS729NTCPS729HQ702616NoneNone  V35T, E40D, V60I, K122E, D123N, P133R, Y146S, K173S, Q174K, D177E, V179I, T200A, Q207A, R211SA
 NTCPS731NTCPS731HQ702628NoneNone  E6D, V35T, E40D, V60I, K122E, D123S, I135T, E138A, K173L, Q174K, V179I, G196K, T200A, Q207A, R211SA
 AICPS107AICPS107HQ702634NoneNone  V35T, E40D, K122E, D123S, K173S, Q174K, D177E, V179I, T200A, Q207A, R211SA
 AICPS438AICPS438HQ702638NoneNone G190AE6D, V35T, T39A, E40D, V60I, K122E, D123S, I135T, I142V, K173A, Q174K, D177E, V179I, T200I, Q207A, R211SA
 AICPS283AICPS283HQ702652NoneNone  E6D, I31V, V35T, C38R, T39I, E40D, K43N, K49R, V60I, K122E, D123S, I135T, T165I, K173S, D177E, T200A, I202V, Q207A, R211SA
 NTCPS709NTCPS709HQ702661NoneNone  E6D, V35T, E36D, E40D, K49R, V60I, D121H, K122E, D123S, I135T, I142V, S162A, K173S, Q174K, D177E, V179I, T200A, Q207AA
 AICPS106AICPS106HQ702675NoneNone  E6D, V35T, T39A, E40D, S48T, V60I, K122E, D123N, I135T, G141A, S162C, K173A, Q174K, D177E, T200A, Q207EA
Caron (2012)Gab014268Gab014268HQ541900NoneNone  K20R, V35T, T39K, E40D, K122E, D123N, K173S, G196K, T200A, I202V, E204G, Q207A, R211S, V245Q, D250EA
 Gab082238Gab082238HQ541937NoneNone  V35T, T39K, E40D, D121Y, K122E, D123G, I135T, S162F, E169D, K173A, Q174K, N175Y, D177E, G196E, T200A, Q207A, R211S, V245M, D250EA
 Gab082180Gab082180JN705002NoneNone  K11T, V35T, T39K, E40D, K102Q, D123E, I135V, S162A, T200A, Q207N, R211K, V245QA
Frange (2012)130217GJR130217GJRJQ292410NoneNone  V35T, T39L, E40D, D121Y, K122E, D123G, I142V, A158S, S162A, T165TI, E169D, K173AT, Q174K, D177DE, I178M, V179I, G196E, T200A, Q207A, R211SA
 751607LAC751607LACJQ292415NoneNone  V10X, V35T, E40D, V60I, D121H, K122E, D123G, I135T, S162A, K173S, Q174K, D177E, V179I, T200A, Q207A, R211S, D250EA
 690207CUBF690207CUBFJQ292418NoneNone  P4S, K11T, V35T, T39A, E40D, V60I, K122E, D123N, I135T, K173S, Q174K, D177E, V179I, T200E, Q207T, R211S, F214LA
 870105EPS870105EPSJQ292421NoneNone  T39A, E40D, K49R, E53Q, T107S, G112A, K122E, D123S, T131TP, T139A, K173S, Q174K, D177E, V179I, T200A, Q207A, R211K, V245EA
 490109JT490109JTJQ292443NoneNone  T39A, E40D, S48T, V90VA, K122E, D123N, K173T, Q174K, D177E, Q207A, R211KA
Karlsson (2012)SE_9SE_9JQ698670NoneNone  V35T, E36A, T39E, E40D, D123N, I142V, K173L, Q174K, D177E, V179I, T200A, I202V, Q207A, R211S, F214L, V245TA
 SE_34SE_34JQ698689NoneNone  E28A, V35T, E40D, K49R, V60I, D121H, K122E, I135T, S162C, K173L, Q174K, D177E, I178M, V179I, Q207A, R211S, V245I, E248D, D250EA
 SE_53SE_53JQ698704NoneNone  V35T, E36ED, T39AS, E40D, K122E, D123S, I135T, K173A, D177E, V179I, Q207K, R211S, F214L, V245TA
 SE_207SE_207JQ698812NoneNone  E6D, V35T, T39K, E40D, G45R, V60I, K122E, D123S, I135T, K173L, Q174K, D177E, V179I, T200A, Q207A, R211S, F214L, V245Q, S251NA
Mollan (2012)MK105MK105w0 NoneNone  K20KR, V35T, T39A, E40D, V60I, K122E, D123N, I135T, K173S, Q174K, D177E, T200A, Q207D, R211S, F214LA
Nazziwa (2012)10116011011601JX498971NoneNone  V35T, T39A, E40D, V60I, K122E, D123S, I135T, I142VA
 50445015044501JX499001NoneNone  I5V, V35T, T39A, E40D, V60I, K122E, D123S, I135T, I142V, D177E, I178M, V179I, T200I, Q207E, R211K, P243T, V245Q, T286A, E291D, I293V, P294TA
Reynolds (2012)J0747J0747-0JN652167NoneNone  V35IT, E40D, K49R, K122E, D123N, I135T, K173LS, D177E, V179I, T200A, Q207A, R211S, V245Q, E291D, P294TA
Sigaloff (2012)KECGP001KECGP001JN628461NoneNone  V21I, V35T, T39A, E40D, V60I, K122E, D123S, I135T, S162C, K173S, Q174R, D177E, G196E, Q207A, R211SA
 KECGP051KECGP051JN628467NoneNone  K20R, I31V, V35T, T39I, E40D, K122E, D123N, K173A, Q174K, D177E, V179I, T200A, I202V, Q207A, R211KA
 KECGP061KECGP061JN628470NoneNone  V35T, E40D, K49R, I50V, V60I, K122E, D123S, I135T, K173S, D177E, V179I, Q207A, R211SA
 KEKSN404KEKSN404JN628472NoneNone  E6D, I31V, V35T, T39I, E40D, K49R, V60I, D121H, K122E, D123E, D177E, Q207E, R211KA
 KEKSN406KEKSN406JN628473NoneNone  V35T, E40D, V60I, K122E, D123S, K166R, K173A, Q174K, D177E, T200A, Q207A, R211SA
 KELKN201KELKN201JN628482NoneNone  E6D, I31V, V35T, E40D, V60I, K122E, D123N, I135T, K173S, Q174K, V179I, T200A, I202V, Q207A, R211S, F214LA
 KELKN227KELKN227JN628499NoneNone  V35T, T39I, E40D, V60I, K122E, A158S, Q174K, D177E, T200A, Q207A, R211S, F214LA
 KELKN231KELKN231JN628501NoneNone  V35T, E40D, V60I, K102Q, D121Y, K122E, D123S, I135T, K173S, Q174K, D177E, V179I, Q207A, R211N, F214LA
 KELKN242KELKN242JN628508NoneNone  E6D, V21I, K32R, V35T, E40D, K49R, V60I, V90I, K122E, D123S, I135T, K173L, Q174K, D177E, T200A, Q207A, R211SA
 KELKN246KELKN246JN628510NoneNone K101NI2M, I5M, E6D, L12S, P14S, T27I, I31V, K32E, V35A, E40D, K43L, K46R, I47L, K49R, V60I, P97Q, K104E, D121H, K122E, D123S, I135T, E138D, K173S, Q174K, D177E, V179I, T200A, I202V, Q207A, R211KA
 KELKN253KELKN253JN628516NoneNone  E6D, V35T, E40D, V60I, D121N, K122E, D123S, K173V, Q174K, V179I, T200E, Q207A, R211SA
 KELKN260KELKN260JN628519NoneNone K103NE6D, I31V, V35T, E40D, K102R, K122E, D123N, I142M, K173S, Q174R, D177E, V179I, Q197K, T200A, I202V, Q207A, R211NA
 KELKN262KELKN262JN628521NoneNone K103NE6D, I31V, V35T, E40D, S48T, K49R, K122E, D123N, I135T, I142V, K173T, Q174K, D177E, Q207E, R211KA
 KELKN268KELKN268JN628526NoneNone  K20R, I31V, V35T, T39I, E40D, K49R, V60I, K122E, D123N, I135T, K173L, Q174K, D177E, V179I, Q207A, R211SA
 KEMGO613KEMGO613JN628532NoneNone  I2T, E6D, K11E, K20R, V35T, T39I, E40D, E42K, V60I, K104E, V118I, K122E, D123S, Q145W, K173L, Q174K, D177E, V179I, L193I, Q197K, R199G, T200A, Q207D, F214LA
Ssemwanga (2012)RCC_TDR_358561RCC_TDR_358561JQ266029NoneNone  E6K, K11Q, V35T, T39A, E40D, K122E, D123N, K173S, D177E, V179I, T200A, I202V, E204D, Q207A, F214LA
 RCC_TDR_480631RCC_TDR_480631JQ266033NoneNone  V35T, T39A, E40D, K49R, V60I, V118I, K122R, I135T, Q145C, K173L, Q174K, D177E, V179T, Q207A, R211S, F214LA
 RCC_TDR_483515RCC_TDR_483515JQ266050NoneNone  V35T, T39A, E40D, V60I, V118I, I135T, Q145C, K173L, Q174K, D177E, V179T, T200A, Q207A, R211S, F214LA
Ssemwanga (2012)3272HR3272HRJF800198NoneNone  V35T, E40D, V60I, K166R, K173L, Q174K, D177E, V179I, Q207A, R211SA
 6356HR6356HRJF800205NoneNone  E6K, K20R, V35T, E40D, V60I, K101Q, K122E, K173S, Q174K, D177E, T200A, Q207E, R211SA
Yang (2012)KN-44KN-44JQ616920NoneNone  K20R, V35T, E40D, V60I, D121H, K122E, I135T, T165TI, K173V, Q174K, D177E, V179I, Q207A, R211S, V245KA
 KN-54KN-54JQ616923NoneNone  V21I, V35I, E40D, V60I, D121H, K122E, D123G, I135IR, K173S, Q174K, V179I, Q207A, R211NA
 KN-96KN-96JQ616925NoneNone  K20R, V21I, V35T, T39A, E40D, V60I, K122E, D123N, I135T, K173S, Q174KR, D177E, V179I, T200A, I202V, Q207A, R211SA
 KEN-68TKEN-68T NoneNone  E36EK, I37F, C38C*, E40D, K49R, V60I, K122E, D123S, I135T, K173S, Q174K, V179I, T200A, Q207A, R211S, V245TA
Youngpairoj (2012)cm8bbcm8bbDQ166432NoneNone  E6N, V8I, K11T, V35T, E40D, V118I, D121H, K122E, D123S, I142V, F171Y, K173S, D177E, I202V, Q207A, R211S, F214L, V245Q, E248D, K275Q, V276I, R284K, T286A, V292I, I293V, P294T, L295M, E297Q, E312N, S322T, M357K, G359S, T369A, A371V, I375A, K390R, A400L, E432D, V435LA
Antoniadou (2013)GR054GR054KF671875NoneNone  E40D, V60I, K122E, D123N, I135T, K173S, Q174K, D177E, I178M, T200A, Q207A, R211S, V245RA
 GR134GR134KF671941NoneNone  E40D, K49R, V60I, D121H, K122E, I135T, K173L, Q174K, V179I, Q207A, R211K, V245MA
 GR088GR088KF671898NoneNone  T39A, E40D, V60I, K122E, D123S, I135T, I142V, K173S, Q174K, D177E, V179I, T200TA, Q207A, R211S, F214FL, V245QA
 GR140GR140KF671947NoneNone  E40D, K49R, V60I, D121H, K122E, I135T, K173L, Q174K, V179I, Q207A, R211K, V245MA
Avi (2013)3636JX431647NoneNone  K11T, V35T, E36D, T39N, E40D, K49R, V60I, K122E, D123S, I135T, S162A, K173S, Q174K, Q207A, R211KA
Billong (2013)MR102MR102KF192225NoneNone  P4H, K11T, V35T, T39N, E40D, D121H, K122E, D123S, I135V, S162C, E169D, K173A, Q174K, D177E, G196E, T200A, Q207A, R211S, V245Q, E248D, K281R, T286A, E291D, V292VI, I293V, E297P, E312D, G335DA
Frentz (2013)EHR-09113EHR-09113JX299682NoneNone  K30Q, K32G, A33C, L34T, V35L, E36N, I37F, E40D, K49R, V60I, V90VI, K122E, D123S, I135T, K173S, Q174K, D177E, V179I, Q197QE, T200A, E203ED, Q207A, R211RKNS, V245KNA
 EHR-14086EHR-14086JX299772NoneNone  V35T, E40D, I50V, V118I, K122E, D123DN, I135T, I142IT, T165I, K173S, Q174QR, V179VI, E194ED, T200TA, Q207A, R211S, F214L, V245LA
 EHR-16074EHR-16074JX299809NoneNone  E6D, V35T, T39K, E40D, V60I, W88WC, K122E, D123S, I135T, K166KR, E169ED, K173L, Q174K, D177E, V179I, T200A, Q207A, R211S, F214L, V245QA
 EHR-49747EHR-49747JX300367NoneNone  V35T, E40D, K49R, V60I, K173L, Q174K, D177E, V179I, Q207A, R211K, V245KA
 EHR-76153EHR-76153JX300841NoneNone  T39K, E40D, K122E, D123S, A158S, K173S, Q174K, D177E, Q207A, R211S, V245MA
Hassan (2013)RS09000890RS09000890HQ441635NoneNone  V35T, E40D, K49R, V60I, K122E, I135T, K173S, Q174K, D177E, V179I, I195IL, Q207A, R211S, D250E, K281KR, T286A, E291D, I293V, P294T, E312DA
 RS09000891RS09000891HQ441636NoneNone  V8I, P9PQ, V35T, E40D, V60I, K122E, I135T, K173L, Q174K, D177E, V179I, Q197QL, Q207A, R211S, D250E, A272P, K277R, T286A, E291D, V292I, I293V, P294T, L301IA
 RS09000911RS09000911HQ441656NoneNone  V35T, E40D, V60I, D121H, I135T, K173L, Q174K, D177E, V179I, T200M, Q207A, R211K, F214L, V245E, T286A, E291D, V292I, I293V, T296S, E312TA
 RS09000913RS09000913HQ441658NoneNone  V35T, E40D, V60I, K122E, K173S, Q174K, D177E, V179I, T200A, Q207D, R211RK, D250E, K281R, T286A, E291D, V292I, I293V, L295MA
 RS09000941RS09000941HQ441683NoneNone  E6D, V35T, E40D, K49R, V60I, K64KR, T69S, K122E, D123S, I135T, S162C, K173A, Q174K, D177E, I178L, V179I, Q207A, R211AT, V245E, E248D, D250E, A272P, K275Q, E291D, I293V, P294IV, E312DA
 RS09000966RS09000966HQ441704NoneNone  E29D, V35T, T39A, E40D, K49R, I135T, I142V, K173T, D177E, V179I, T200A, Q207A, R211RS, P243A, V245Q, E248D, E291D, I293V, P294T, E312DA
 RS11000253RS11000253JQ698353NoneNone  K20R, V21I, V35T, T39A, E40D, V60I, K64KR, K122E, D123G, I135T, K173L, Q174K, D177E, V179I, T200A, Q207A, R211S, V245E, D250E, T286A, E291D, V292I, I293V, P294T, E312DA
 RS11000256RS11000256JQ698355NoneNone  K32Q, V35T, E40D, K49R, V60I, K122E, D123N, I135T, E169D, K173L, Q174K, D177E, V179I, T200A, Q207A, R211K, A272P, I293VA
 RS11000259RS11000259JQ698357NoneNone  P4H, K11KE, K20R, V35T, T39A, E40D, D121H, K122E, D123S, I135T, S162C, E169D, K173S, Q174K, D177E, V179I, T200A, Q207A, R211S, V245VI, E248ED, D250E, S251HR, T286A, E291D, I293V, P294T, E312EDA
 RS11000265RS11000265JQ698361NoneNone  V35T, T39A, E40D, V60VI, K122E, D123S, T131TP, I135T, I142IV, S162A, K173A, Q174K, Q207A, R211NS, V245E, E248D, D250E, A272P, E291D, V292I, I293V, P294T, L295M, E312D, V314VGA
 RS11000274RS11000274JQ698365NoneNone  V8I, V35T, E40D, V60I, D121H, K122E, I135T, R143RK, K173L, Q174K, D177E, V179I, Q207A, R211K, E248D, D250E, K277R, T286A, E291D, I293V, P294T, E312EKA
 RS11000281RS11000281JQ698371NoneNone  E6D, V35T, E40D, K49KR, I50V, V60I, K122E, D123S, I135T, E169D, K173A, Q174K, D177E, I178V, V179I, T200A, Q207AD, R211K, V245E, D250E, K281KR, R284K, T286A, E291D, I293V, P294T, E312DA
 RS11000290RS11000290JQ698377NoneNone  V35T, T39K, E40D, D121H, K122E, D177E, I178M, G196E, T200A, Q207E, R211K, P243S, V245K, A272P, K281R, E291D, V292I, I293IV, E297R, A304E, E312NA
 RS11000301RS11000301JQ698386NoneNone  K11T, K20R, V21I, V35T, T39KR, E40D, V60I, K122E, D123N, I135T, S163T, T165I, K173S, D177E, V179I, Q197K, T200E, I202V, E203Q, Q207D, R211K, F214L, V245Q, E248D, T286A, E291D, I293V, P294T, E312NA
 RS11000310RS11000310JQ698392NoneNone  E6K, K11T, V35T, E36D, T39A, E40D, V118I, K122E, D123N, I135T, K173A, D177E, V179I, V189I, Q207A, R211K, F214L, V245Q, D250E, V276I, Q278N, T286A, E291D, I293V, P294T, E312DA
 RS11000340RS11000340JQ698413NoneNone  V35T, E40D, K49R, V60I, D121H, R125RK, I135T, K173L, Q174K, Q207A, R211N, V245E, D250E, K277R, T286A, E291D, V292I, I293VA
 RS11000341RS11000341JQ698414NoneNone  V35T, E40D, V60I, D121H, K122E, I135T, R143RK, K173L, Q174K, D177E, V179I, Q207A, R211S, V245E, D250E, A272P, K275Q, K281R, T286A, E291D, V292I, I293V, E312DA
Hawke (2013)2082347020823470KC238048NoneNone  K11Q, V21I, V35T, T39A, E40D, T58SY, D121Y, K122E, D123G, I135T, K173S, Q174K, D177E, I178V, V179I, T200A, Q207A, R211S, V245EQA
 5545224 H5545224 HKC238184NoneNone  K11T, V35T, E40D, K122E, D123S, S162A, K173S, D177E, Q207A, R211S, F214L, V245Q, A272TA
Inzaule (2013)517517JQ914101NoneNone  V35T, E40D, K49KR, V60I, D121H, K122E, I135T, K173S, Q174K, D177E, V179I, Q207EA
 472472JQ914056NoneNone  K11S, K20R, V21I, V35T, T39N, E40D, I50V, K122KE, D123N, Y146YS, S163T, K173S, D177G, V179I, T200A, I202V, Q207A, R211KA
Kemal (2013)75877587JQ364521NoneNone  E6D, K20R, V35T, T39A, E40D, K49R, V60I, K104R, D121Y, K122E, I135T, K173A, Q174E, D177E, V179I, T200A, E204K, Q207A, R211S, F214L, V245E, D250E, K277R, T286A, E291D, I293V, P294I, E312D, G335D, M357K, G359S, K366R, E370D, A371V, A376V, T377M, A400T, T403M, E404DA
 76217621JQ364522NoneNone  V35T, E40D, K49R, V60I, K122E, D123N, I135T, K173S, Q174K, D177E, V179I, T200A, Q207A, R211S, V245Q, E248D, K275Q, E291D, I293V, P294T, K311R, E312D, I329V, G335D, M357K, G359S, K366R, T369A, A371V, A376V, T377M, E399D, A400T, T403M, E404DA
 80088008JQ364531NoneNone  V35T, E40D, K49R, V60I, K122E, D123S, I135T, I142V, K173S, Q174K, D177E, V179I, T200A, Q207A, R211S, D237E, V245K, D250E, A272S, T286A, E291D, V292I, I293V, P294T, R307K, E312D, G335D, R356K, M357R, G359T, K366R, A371V, I375V, A376V, T377M, T386S, E396D, A400T, T403M, E404DA
Kiertiburanakul (2013)R41056R41056KC970942NoneNone  V35T, T39A, E40D, K122E, D123S, I135T, K173A, Q174K, D177E, I178M, Q207A, R211S, V245Q, D250EA
Kiptoo (2013)SNH053SNH053KC516947NoneNone  K20R, V35T, E40D, V60I, K122E, D123DEG, I135T, K173A, Q174KR, I178IM, V179I, Q207A, R211S, V245EK, A272AT, K281R, T286A, E291D, I293V, P294T, E312DA
 SNH031SNH031KC516986NoneNone  I5V, V35T, E40D, W71W*, K122E, D123N, I135T, K173S, Q174K, D177E, V179I, T200A, Q207A, R211S, I293V, P294TA
 SNH080SNH080KC516984NoneNone  V35T, T39A, E40D, V60I, S68G, D121H, K122D, D123S, I135T, K173LV, Q174K, D177E, I178M, V179VI, T200A, Q207A, R211S, P243S, V245E, E248I, D250E, T286A, E291D, I293V, P294T, K311R, E312DA
 KAP050KAP050KC516899NoneNone  K32KR, V35T, E40D, K43KR, K49KR, V60I, D121H, K122E, I135T, S162H, K173S, Q174K, I195IL, T200TA, Q207A, I244V, D250E, T286A, E291D, V292I, I293V, P294T, K311KR, E312DA
 KTL029KTL029KC516999NoneNone  V21I, V35T, T39A, E40D, K122E, D123NS, E138EA, A158AS, T165TI, K173S, Q174K, N175NY, V179I, T200AS, I202V, Q207A, R211RS, V245Q, E248D, T286A, E291D, V292I, I293V, P294T, E312D, P321PSA
 KAP075KAP075KC516919NoneNone  K32R, V35T, E40D, K104R, K122E, K173S, D177G, V179I, T200TA, I202V, Q207A, R211K, V245Q, D250E, T286A, E291EG, V292I, I293V, P294T, E312DA
 KAP037KAP037KC516890NoneNone  V35T, E40D, V60I, D121H, K122E, I135T, S162Y, K173L, Q174K, D177E, V179I, Q207A, R211N, V245K, D250E, T286A, K287R, E291D, V292I, I293V, P294A, E312DA
 KAP035KAP035KC516888NoneNone  K20KR, T27TS, V35T, E40D, V60I, K64KR, E79ED, K122E, D123S, I135T, E138EA, I142IT, S162Y, K173L, Q174K, D177EG, I178IV, V179I, T200A, Q207A, R211NS, V245E, D250E, T286A, E291D, V292VI, I293V, P294PT, E312DA
 KAP033KAP033KC516887NoneNone  V35T, E40D, K49R, I50V, V60I, K122E, D123S, A158AT, S162H, K173A, Q174K, D177E, V179I, Q207A, R211S, P243PS, V245Q, S251H, T286TA, E291D, V292I, I293V, P294T, E312DA
 SNH026SNH026KC516942NoneNone  E6AT, V35T, E36A, T39E, E40D, K49R, K122E, D123DN, I135T, S162SN, K173LS, Q174KR, D177E, T200A, Q207E, V245K, D250E, A272P, K281R, E291D, V292I, I293V, P294TA
 KTL112KTL112KC517025NoneNone  V35T, E40D, K49R, V60I, K122E, I135T, K173AV, Q174K, D177E, V179I, V189VI, Q207A, R211RS, V245N, E248EK, D250E, A272AP, V276I, T286A, E291D, I293IV, E312NA
 KTL015KTL015KC516993NoneNone  V35T, T39E, E40D, S48T, K122E, D123S, I135T, K173A, Q174K, D177E, V179I, T200A, Q207A, R211S, V245E, D250E, V254I, A272G, E291D, V292I, I293V, P294T, E312DA
 SNH044SNH044KC516964NoneNone  V35T, T39A, E40D, G45GE, S48T, V60I, T69S, D121HY, K122E, I135T, I142V, K173L, Q174K, D177E, V179I, T200A, Q207A, R211S, V245K, E248ED, D250E, T286A, E291D, V292I, I293V, P294T, E312DA
 SNH068SNH068KC516950NoneNone  V35IT, E40D, V60I, D121H, K122E, I135T, K173L, Q174K, D177E, V179I, I202V, Q207A, R211S, P243ST, V245E, D250E, K281R, T286A, E291D, V292I, I293V, P294A, E312DA
 KAP072KAP072KC516917NoneNone  V35T, E40D, V60I, K122E, D123N, I135T, S162Y, K173L, Q174K, D177E, V179I, T200A, Q207A, R211S, V245E, D250E, K275KQ, K281KR, T286A, E291D, V292I, I293V, P294T, E312DA
 KAP046KAP046KC516896NoneNone  V35T, T39M, E40D, K43R, V60I, K122E, D123N, I135T, K173S, Q174K, D177E, V179I, Q207A, R211N, V245KM, D250E, S251SN, A272P, Q278H, T286A, E291D, V292VI, I293V, P294T, E312DA
Leye (2013)SN.MS823SN.MS823FM210742NoneNone  V21I, V35T, E40D, V60I, K64R, D123E, I135T, S163T, Q174K, V179I, T200A, I202V, Q207E, R211K, V245K, E248D, D250E, A272P, T286A, K287R, E291D, V292I, I293V, P294T, S322T, I326V, G335D, R356K, M357K, R358K, G359S, V365I, K366R, A371M, A376ST, I380V, A400T, T403A, E432D, G436EA
Masimba (2013)TZ.HLM.173TZ.HLM.173KC537274NoneNone  V35T, T39A, E40D, V60I, K122E, D123S, I135T, K173L, Q174K, D177E, Q207T, R211SA
 TZ.ET.34TZ.ET.34KC537201NoneNone  E29R, V35T, T39A, E40D, V60I, K122E, D123S, K173S, Q174K, D177E, T200A, I202V, Q207A, R211KA
 TZ.ET.38TZ.ET.38KC537207NoneNone  E29R, V35T, E40D, K43R, V60I, V118I, K122E, D123N, Q145QH, K173S, Q174K, D177E, V179I, Q207A, R211S, F214LA
 TZ96TZ96KC537182NoneNone  T39A, E40D, V60I, T107S, D121H, K122E, K173S, Q174K, D177E, Q207A, R211SA
 TZ85TZ85KC537174NoneNone  E40D, V60I, K122E, D123S, E138Q, S162A, K173S, Q174K, D177E, V179I, T200A, Q207A, R211NA
 TZ73TZ73KC537167NoneNone  E40D, K43R, V60I, K122E, D123S, I135T, K173I, Q174K, V179I, Q207A, R211NA
 TZ.ET.42TZ.ET.42KC537219NoneNone  E29R, V35T, E36EA, E40D, V60I, V118I, K122E, D123N, I135T, K173A, Q174K, V179I, G196E, E203Q, Q207A, R211S, F214LA
 TZ62TZ62KC537162NoneNone  E40D, K43R, V60I, K122E, D123S, I135T, K173I, Q174K, V179I, Q207A, R211NA
 TZ154TZ154KC537100NoneNone  V35T, T39A, E40D, K49KR, P55PS, V60I, V118I, K122E, D123S, I135T, E138A, T139IV, K173A, Q174K, T200A, Q207A, R211RK, F214LA
 TZ.ET.388TZ.ET.388KC537213NoneNone  E29KR, V35T, E40D, V60I, K122E, D123N, I135T, K173LS, Q174K, D177E, V179I, T200A, Q207A, R211S, F214LA
Rusine (2013)722H722HKC841746NoneNone  K11T, V35T, E40D, K49R, V60VI, K122E, D123G, I135T, K173S, Q174K, D177E, V179I, T200TA, Q207A, R211S, F214L, V245Q, E291D, I293V, E312DA
 761H761HKC841771NoneNone  E6K, K11T, V35T, T39AE, E40D, K49R, K122E, D123N, I135T, I142V, K173S, Q174R, D177E, V179I, I195L, T200A, I202V, Q207A, R211S, F214L, V245Q, A272P, I293V, P294T, E312DA
 747H747HKC841760NoneNone  I5IV, E6EGKR, V21I, V35T, E40D, K49R, V60I, K122E, D123GS, I135T, S162SHNR, K173S, Q174K, D177E, T200TA, Q207A, R211S, V245E, D250E, T286A, E291D, V292VI, I293V, P294AT, E312DA
 701H701HKC841726NoneNone  K11T, V35T, T39A, E40D, K49R, K122E, D123S, I135T, I142V, K173L, Q174K, D177E, V179I, Q207A, R211S, V245Q, K275Q, K277R, I293V, P294T, E312DA
 409H409HKC841669NoneNone  K11T, V35T, T39A, E40D, V60I, D121Y, K122E, I135T, I142V, K173S, Q174K, D177E, V179I, Q207A, R211S, V245K, D250E, T286A, E291D, V292I, I293V, P294T, E312D, D320E, S322LA
 766H766HKC841775NoneNone  K11T, V35T, E40D, K49R, V60I, K122E, D123N, I135T, K173S, V179I, Q207A, R211K, V245Q, E248N, D250E, S251IT, K275Q, I293V, P294T, E312DA
 445H445HKC841695NoneNone  K11T, K20R, V35T, T39A, E40D, K49R, V60VI, K122E, D123S, I135T, K173S, Q197K, Q207A, R211S, F214L, V245M, A272P, T286A, I293V, P294T, E312D, Q334QKA
 728H728HKC841750NoneNone  V35T, E40D, V60I, D121H, K122E, D123S, I135T, I142IV, S162SAGT, K173S, Q174R, D177E, V179I, T200A, Q207A, R211S, F214FL, D250E, A272G, T286A, E291D, V292I, I293V, P294T, E312DA
 719H719HKC841742NoneNone  V21I, V35T, T39TA, E40D, S48ST, K49KR, I50IV, V60I, K122E, D123N, I135T, S162A, T165I, K173AS, Q174K, D177E, V179I, T200A, I202V, Q207A, V245Q, K281R, E291D, I293V, P294A, E297K, E312DA
 744H744HKC841759NoneNone  E6K, V35T, T39A, E40D, S48S*AE, K49KR, I50IV, V60I, S68SG, K122E, D123S, K173L, Q174K, D177E, Q207A, R211S, V245M, A272P, T286A, E291D, V292I, I293V, P294T, E312NA
 768H768HKC841777NoneNone  V35T, E40D, V60I, D121H, K122E, I135T, I142V, K173A, Q174K, D177E, V179I, Q207A, R211S, K281R, T286A, E291D, V292I, I293V, P294T, E312DA
Bartolo (2014)09AOHDP21209AOHDP212KF853659NoneNone  V35IMT, T39N, E40D, V60I, K122E, D123S, I135T, K173A, Q174K, D177E, I178M, G196E, T200A, E204ED, Q207A, R211K, V245Q, P247A, E248D, S251T, A272P, L283LI, T286A, E291D, I293V, P294PTA
 09AOHDP29009AOHDP290KF853705NoneNone  V8I, V35T, T39S, E40D, K49R, P52PA, K122E, D123N, I142V, K154R, K173T, T200R, Q207D, R211K, V245E, K275Q, K277KR, L283I, T286A, E291D, I293V, P294T, E297KA