<!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

Reverse Transcriptase Inhibitors

Subtype F
Gene RT
Mutation V90I
Rx >= 1 NNRTI
(+/- NRTI)
IncludeMixtures No
References 10
Patients 12
Isolates 12
Show mutation frequency as:
Exclude mutations:

Sequences matching input query are shown below. Original reference, patient identifier, isolate name, partial treatment histories and accession number are indicated. Complete treatment histories, when available, can be accessed by clicking the isolate name. Sequences may additionally be downloaded in the fasta format, or viewed as individual or composite alignments using the options above. If the user wishes to view individual alignments of isolates for which there are multiple clones, the user can choose to view either an alignment of consensus sequences derived from the clones or an alignment of each clone as well as a consensus sequence.

Author (yr) Patient Isolate Acc# NRTIs NNRTIsNRTIDRMs NNRTIDRMs OtherMutSubtype
Yahi (2001)NY_M44M44AY010472AZT, 3TCNVPM41L, M184VK103N, K238NK20R, V35T, T39S, P52PL, V90I, K122E, S162Y, E169D, K173A, Q174K, Q207N, R211K, D237EF
Apetrei (2003)AC_Pat23RO.01.IS.23AY333601AZT, 3TC, DDINVPD67N, T69D, K70R, K219QK103N, Y181CV35T, T39A, E40D, V60I, V90I, D123E, I135L, T139S, S162H, K173A, Q174K, I195L, G196E, Q197K, T200E, E203D, Q207E, R211K, E224D, L228HF
Rodrigues (2005)BLF_Pat26BR03SP138AY643234AZT, 3TCNVPD67NS, K70R, M184V, T215F, K219EV108I, Y181CK20KR, V35T, T39R, K43E, T69N, E79D, V90I, D123E, I135L, S162Y, K173T, Q174K, V179I, T200A, Q207E, R211K, V245Q, E248D, D250DE, A272P, R284K, T286TA, E291D, V292VI, I293V, E297V, Q332HF
 BLF_Pat33BR03SP36AY643247AZT, 3TC, DDI, D4TNVP, EFVD67N, K70R, M184V, T215F, K219EK101E, V108I, Y181C, G190AE6D, K20R, V35T, T39L, V60I, V90I, I135R, S162H, E169D, K173A, Q174K, V179I, T200R, Q207E, R211K, L228H, V245Q, E248D, A272P, T286A, E291D, V292I, I293V, P294S, E297AF
Baxter (2006)48-12061206-30604DQ877750NRTINNRTIM41L, D67N, T69D, L74V, L210W, T215YK103N, Y181CV35T, T39A, E44D, K49R, V60I, V90I, K122E, D123S, S162D, E169A, K173A, Q174K, I178L, Q207E, R211K, D237E, V245Q, E248D, A272P, T286A, A288T, E291D, V292I, I293V, E297A, E312E*, F346Y, R356K, M357R, G359S, A376S, T377L, K390R, Q394L, E399D, A400TF
Waleria-Aleixo (2008)02PE06082402PE060824FJ591164NRTINNRTID67N, K70R, T215F, K219QY181IV35I, T39D, V90I, K104R, K122KE, D123DN, I135L, S162Y, E169D, K173A, Q174K, V179I, G196GE, T200A, Q207E, R211RK, V245Q, E248DF
 RES304RES304FJ591995NRTINNRTID67N, K70R, T215F, K219QK101P, K103NP4L, K20R, V35IT, T39LS, V60VI, K64KR, V90I, I135V, S162Y, K173T, Q174K, T200TA, Q207D, H208HY, R211K, L228H, Q242QH, V245Q, E248D, A272P, K277R, T286A, E291D, V292I, I293V, E297TF
Dumans (2009)RENA244RENA244FJ405174AZT, DDI, D4T, 3TC, UnknownNVP, EFV, UnknownM41L, D67N, T69D, K70R, V75M, T215F, K219QK103N, G190AE6D, V35T, V60I, V90I, K102N, S117A, D121H, K122E, I135T, S162Y, E169D, P170L, F171Y, Q174K, D177E, G196E, T200A, E203D, Q207E, L228H, V245Q, D250E, A272P, T286A, E291D, V292I, I293V, E297A, V317AF
Hawkins (2009)Q242ZZQ242FJ931229D4T, 3TCNVPM184V, T215YV108I, Y181CI31L, V35I, T69A, V90I, L109I, D123E, I142V, E169D, K173A, Q174K, D177E, I178L, G196V, T200A, I202V, Q207E, R211K, V245Q, D250S, A272P, K275R, Q278Y, T286TA, E291D, I293V, E297AF
Rodrigues (2010)328_07BR07SC328GQ401323AZT, 3TCNVPM184VK103N, V108VIK20KR, V35T, T39L, V90I, I135IT, S162Y, F171Y, K173T, Q174K, E203D, Q207E, R211K, F214L, V245Q, E248D, A272P, T286A, A288T, E291D, V292I, I293V, E297A, V317A, I326V, I329LF
Billong (2013)MR040MR040KF192237NRTINNRTIM184VK103N, V108VIK22R, V35IT, T39M, S48T, W88C, V90I, D123E, T139K, K173A, Q174K, D177E, I178L, V189I, Q207E, H208HL, R211K, F214LF
Theys (2013)65676567KC219496NRTI, TDFNNRTIM184MIVK103NE44D, V90I, I135V, I142T, S162C, K173T, Q174K, I178L, Q197K, T200A, Q207K, R211QF