<!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

Reverse Transcriptase Inhibitors

Subtype CRF02_AG
Gene RT
Mutation V90I
Rx >= 1 NNRTI
(+/- NRTI)
IncludeMixtures No
References 11
Patients 43
Isolates 45
 
Show mutation frequency as:
Exclude mutations:

Sequences matching input query are shown below. Original reference, patient identifier, isolate name, partial treatment histories and accession number are indicated. Complete treatment histories, when available, can be accessed by clicking the isolate name. Sequences may additionally be downloaded in the fasta format, or viewed as individual or composite alignments using the options above. If the user wishes to view individual alignments of isolates for which there are multiple clones, the user can choose to view either an alignment of consensus sequences derived from the clones or an alignment of each clone as well as a consensus sequence.

Author (yr) Patient Isolate Acc# NRTIs NNRTIsNRTIDRMs NNRTIDRMs OtherMutSubtype
Montes (2004)MB_patSCHE02_SCHE715AJ578156D4T, DDINVPM41L, T215YV108I, Y181CP4S, V35T, E36D, V90I, K104R, K122E, I135V, S162A, E169G, K173A, Q174K, D177E, I178M, V189I, T200A, Q207E, R211K, H221Y, F227ICRF02_AG
Baxter (2006)48-30363036-30310DQ877947NRTINNRTID67N, T69D, K70R, M184I, K219HA98G, V108I, Y181C, G190AV35T, E36A, T39K, K46M, V60I, V90I, K101R, K122E, D123S, S162A, S163T, T165I, Q174E, D177E, T200A, E203N, Q207K, L210I, D218E, V245Q, K275KQ, K277R, T286A, E291D, I293V, P294T, E297EK, E300EQ, S322T, G335D, R356K, M357K, G359S, A360I, A371V, I375V, K390R, K395RCRF02_AG
 48-30903090-30925DQ877999NRTINNRTIM41L, D67N, T69D, K70R, L74I, M184V, L210W, T215F, K219QA98G, K103N, V108I, Y181CV35T, T39A, K49R, V60I, V90I, K122E, I135V, S162E, E169K, K173T, Q174K, D177E, I178M, T200A, E203D, Q207E, D218E, L228H, V245Q, E248D, D250E, L283I, A288T, E291D, V292I, I293V, P294T, S322T, G335D, M357Q, G359S, A371V, I375V, A376S, K390R, K395RCRF02_AG
Laurent (2006)CK22-202CM2-2AM279451AZT, 3TCEFVM41L, M184IK101E, K103NE28K, V35T, T39A, K43N, V90I, K104R, K122E, D123N, I135V, S162A, K173I, Q174K, D177E, I178M, G196E, T200A, Q207G, V245Q, T286A, T290S, E291D, V292I, I293V, P294T, E312D, S322A, I326V, G335D, R356K, M357K, G359S, A371V, I375V, K390R, T403M, E404DCRF02_AG
Seyler (2007)501CS_501 AZT, D4T, 3TCEFV  V35T, E36D, V60I, S68SG, V90I, I135V, S162A, K173T, Q174KR, D177E, I178M, T200A, Q207E, R211K, V245QCRF02_AG
Zhong (2007)D000805CN_008EF199556NRTINVPM41L, T215YK103N, P225HL34I, V35T, T39K, K43E, V90I, K122E, D123S, I178M, K238R, V245E, V254A, N255DCRF02_AG
Sylla (2008)A1469A1469_C1EF525655D4T, 3TCNVPM184VK103N, Y188HV21I, V35T, K49R, V60I, V90I, K122E, I135V, S162A, E169Q, K173T, Q174E, D177E, I178L, V189I, T200A, Q207E, R211K, V245Q, D250E, K275R, T286A, E291D, V292I, I293V, P294T, S322A, I326V, R356K, M357K, G359S, A371V, I375V, V381I, K390R, T403M, E432DCRF02_AG
  A1469_C2EF525656D4T, 3TCNVPM184VK103N, Y188LV21I, V35T, K49R, V60I, V90I, K122E, I135V, S162A, E169Q, K173T, Q174E, D177E, I178L, V189I, T200A, Q207E, R211K, V245Q, D250E, K275R, T286A, E291D, V292I, I293V, P294T, S322A, I326V, R356K, M357K, G359S, A371V, I375V, V381I, K390R, T403M, E432DCRF02_AG
 A2619A2619_C1EF525657AZT, 3TCEFVD67N, K70R, M184V, T215Y, K219EA98G, V108I, V179E, Y181CV35T, E36D, V90I, L109I, D121Y, K122E, I135V, T139S, S162A, K173T, Q174N, D177E, T200A, Q207E, R211K, V245Q, K281R, T286A, E291D, V292I, I293V, P294T, S322T, I326V, G335D, R356K, M357K, G359S, A371V, I375V, K390R, K395R, E399D, T403M, E432D, V435LCRF02_AG
  A2619_C2EF525658AZT, 3TCEFVD67N, K70R, M184V, T215Y, K219EA98G, V108I, V179E, Y181CV35T, E36D, V90I, L109I, D121Y, K122E, I135V, T139S, S162A, K173T, Q174N, D177E, T200A, Q207E, R211K, V245Q, K281R, T286A, E291D, V292I, I293V, P294T, S322T, I326V, G335D, R356K, M357K, G359S, A371V, I375V, K390R, K395R, E399D, T403M, E432D, V435LCRF02_AG
Hawkins (2009)P614ZZP614FJ931128D4T, 3TCNVPA62AV, V75I, Y115F, M184VV106A, Y181CK20R, V21I, V35T, E36D, V60VI, V90I, D121H, K122E, D123E, I135V, S162A, K173T, Q174K, D177E, I178IM, T200A, Q207E, R211K, H221Y, P243T, V245Q, K277Q, T286A, E291D, I293V, E297R, S322T, I326VCRF02_AG
 Q176ZZQ176FJ931192D4T, 3TCNVPM184VK103NK20R, V35T, E40D, V90I, S162A, K173T, Q174K, T200A, Q207E, R211RK, V245E, E248D, T286A, E291ED, V292I, I293V, P294T, V317A, S322TCRF02_AG
 Q218ZZQ218FJ931204D4T, 3TCNVPD67DN, K70R, M184V, T215TFIS, K219EQK101KHNQ, Y181CV35T, E36D, V60I, V90I, I135V, S162A, K173T, Q174K, D177E, I178M, T200A, Q207E, R211K, F214L, D218E, L228LR, P243H, V245Q, Q278N, T286A, E291D, V292I, I293V, P294T, S322A, I326VCRF02_AG
 Q226ZZQ226FJ931219D4T, 3TCNVPK65R, K70KT, V75I, F77L, F116Y, Q151MY181C, G190AV35T, E36D, K49R, S68G, V90I, K101KT, D123E, I135V, S162A, K173T, Q174K, D177E, T200A, Q207E, R211K, F214L, P243PS, V245PQ, T286A, E291D, V292I, I293V, P294T, S322T, I326VCRF02_AG
 Q410ZZQ410FJ931231D4T, 3TCNVPK65R, T69~, K219RK103N, Y181CK11Q, V21VI, L34LI, V35T, T39A, S68SN, V90I, K122KE, D123N, I135V, S162A, K173T, Q174K, D177E, T200A, Q207E, R211K, F214FL, D218DY, H221Y, V245T, D250E, S251C, T286A, E291D, V292I, I293V, P294T, S322T, I326VCRF02_AG
 Q774ZZQ774FJ931246TDF, 3TCEFV, NVPK65R, M184IK103N, Y181C, M230LV35T, E36D, S68G, T69N, V90I, D123E, I135T, I142V, S162A, K173I, Q174K, D177E, T200A, Q207E, K220NS, H221I, Q222R, E224N, L228R, P243T, V245Q, E248EDKN, K249KQ, S251C, A272P, L283I, T286V, E291D, V292I, I293V, P294T, L295M, S322TCRF02_AG
 Q942ZZQ942FJ931274D4T, 3TCNVPD67N, K70R, M184V, K219QK101E, G190AK20R, E28K, A33AG, V35I, V60VI, V90I, K102Q, I135IT, S162A, K173T, Q174K, T200A, Q207E, D218DE, L228LH, V245Q, D250E, K275R, V276VI, T286A, E291D, V292VI, I293V, P294T, S322TCRF02_AG
 Q980ZZQ980FJ931285D4T, 3TCEFV, NVPK65R, F116Y, Q151MK103N, Y181CT27S, V35I, E36D, K43E, S68G, T69I, V90I, K101KR, K122KE, D123E, R172K, K173I, Q174K, D177E, I178L, T200A, Q207E, R211K, F214L, K223Q, L228R, V245Q, E248D, K249Q, S251H, K277R, T286A, E291D, V292I, I293V, P294T, S322T, I326VCRF02_AG
 Q944ZZQ944FJ931288D4T, 3TCNVPD67DN, K70R, M184V, K219QK101E, G190AP4S, V35T, V60I, K64R, V90I, I135V, E138A, S162A, K173T, Q174K, D177E, V179M, T200A, Q207D, R211K, D218DE, V245K, T286A, E291D, V292I, I293V, P294T, S322T, I326VCRF02_AG
 Q960ZZQ960FJ931289AZT, D4T, 3TCNVPK70R, L74LI, M184V, T215F, K219QK103N, V108I, M230LV35T, E36D, K64KR, T69N, V90I, K122M, S162A, K173T, Q174K, D177E, I178L, Q207E, R211K, L228Q, Q242K, V245Q, K275KR, K281KR, L283I, T286A, V292I, I293V, P294T, S322T, I326VCRF02_AG
 R121ZZR121FJ931330D4T, 3TCNVPM184V, T215YV108I, Y181CT7I, V35T, E36D, V90I, K122E, I135V, S162A, K173T, Q174E, D177E, V179VI, T200A, Q207E, R211K, H221Y, V245Q, K281R, T286A, K287KR, E291D, V292I, I293V, P294T, E297EK, S322T, I326VCRF02_AG
 R129ZZR129FJ931336AZT, 3TCNVPM184V, T215YK103NP9KQ, K20R, V35T, V60I, V90I, I135V, T139R, A158S, S162A, K173T, Q174N, D177E, T200A, I202IV, Q207E, R211K, V245E, I270IV, K281R, T286A, E291D, V292I, I293V, P294T, S322A, I326VCRF02_AG
 R69ZZR69FJ931345TDF, 3TCNVPK65RK103N, Y181CV35T, E36D, V60VI, V90I, D123E, I135V, S162A, K173I, Q174E, D177E, I178IMV, T200A, E204K, Q207E, R211RK, V245Q, A272P, K281R, T286A, E291D, V292I, I293V, S322T, I326VCRF02_AG
 R23ZZR23FJ931363AZT, 3TCNVPM184VV108I, Y181CV35T, E36D, V90I, I135V, T139TK, S162A, K173T, Q174K, D177E, I178M, T200A, Q207D, R211K, H221Y, V245K, S251N, K275R, V276I, T286A, E291D, V292I, I293V, S322TCRF02_AG
 R203ZZR203FJ931366D4T, 3TCNVPK70KR, M184VK103NV35T, V90I, K122Q, I135T, S162A, K173T, Q174K, D177E, T200A, Q207E, R211K, V245E, A272PT, T286A, E291D, I293V, P294T, R307RK, S322TCRF02_AG
 R469ZZR469FJ931393D4T, 3TCNVPM41L, D67DG, T69TADN, M184V, T215YK101E, V108I, Y181C, G190AE28R, K32E, V35T, E36D, E44ED, K49R, E53D, V60VI, V90I, L109I, I135V, S162A, K173T, Q174E, D177E, I178IM, T200A, E203ED, Q207EK, H208HY, R211K, W212WR, H221HY, V245K, A272P, K281R, T286A, E291D, V292I, I293V, E297Q, S322T, I326VCRF02_AG
 R377ZZR377FJ931422NRTIEFVM184VK103NV35T, T39AS, V60I, V90I, I135T, I142V, S162A, K173T, Q174E, D177E, I178IM, T200A, Q207E, R211K, V245T, D250T, K281R, T286A, E291D, V292IK, I293V, P294T, V317A, S322TCRF02_AG
 R234ZZR234FJ931429D4T, 3TCNVPD67DN, K70R, M184V, K219QA98AG, K103N, K238TV35T, K49R, V60I, V90I, D123E, I135V, S162A, E169R, R172T, K173T, Q174E, D177E, T200A, E203EK, Q207E, R211K, V245Q, S251SN, K275KR, T286A, E291D, V292I, I293V, P294T, S322ACRF02_AG
 R235ZZR235FJ931430D4T, 3TCNVPM184VK103N, K238TV35T, T39L, S68SG, V90I, K122E, I135V, S162A, K173T, Q174K, D177E, I178M, T200A, E203ED, Q207E, H221Y, V245Q, E248N, K277R, T286A, E291D, V292I, I293V, P294PT, S322TCRF02_AG
 R439ZZR439FJ931449AZT, 3TCNVPM41L, L74LI, M184V, L210W, T215YK103N, V108IV35T, E44ED, V90I, D123E, I135IT, S162A, K166R, K173T, Q174R, D177E, I178L, T200A, Q207E, R211K, V245E, A272P, K277R, K281R, L283I, T286A, E291D, V292I, I293V, I326VCRF02_AG
Germanaud (2010)54955495 AZT, 3TCNVPM184V V35T, T39L, S48T, V90I, K122E, S162A, K173T, Q174K, D177Q, V189I, T200A, Q207E, R211KCRF02_AG
 55185518 AZT, 3TCNVPM184VK103NE28R, K32E, V35T, E36D, T39N, V60I, V90I, D123N, I135V, T139R, S162A, K173A, Q174K, D177E, T200A, Q207E, R211KCRF02_AG
 55195519 AZT, 3TCNVPM184VK103NV35T, E36D, V60I, V90I, I135V, E138Q, S162A, K173T, Q174K, D177E, I178L, T200A, Q207E, R211KCRF02_AG
 55685568 AZT, 3TCNVPM184VK101E, Y181CK20R, K22N, V35T, E36D, T39M, K49R, V90I, I135T, S162A, P170L, R172K, K173A, Q174E, D177E, I178M, T200A, K201R, E204K, Q207E, R211KCRF02_AG
 55745574 AZT, 3TCNVPM184VG190AT27S, V35T, E36D, T39L, V90I, I135M, S162A, E169Q, K173T, Q174E, D177E, T200A, E203K, Q207E, R211K, K220RCRF02_AG
 55935593 AZT, 3TCNVPM184VK103N, Y181CV35T, K43E, K49R, N57H, V90I, K101R, K122E, D123N, I135V, S162A, K173T, Q174K, D177E, I180V, T200A, Q207E, Q222R, V245QCRF02_AG
 56005600 AZT, 3TCNVPM184VK103N, Y181C, G190AL26W, V35T, E40D, V60I, V90I, K101Q, I135V, S162A, K173A, Q174K, D177E, Q207E, V245QCRF02_AG
 56365636 AZT, 3TCNVPM184VV106AT7I, E42D, E44K, G45E, K66N, V90I, D123E, S162A, Q174E, D177E, T200ACRF02_AG
 56655665 AZT, 3TCNVPM184VV106M, G190AV35T, E36D, V90I, I135V, S162A, K173T, Q174K, D177E, I178M, T200A, Q207E, R211K, E248DCRF02_AG
Dagnra (2011)08TG.E502408TG.E5024FR715275D4T, 3TCNVPM184VV106A, F227LK20R, V35T, V60I, V90I, K122E, D123E, I135V, S162Q, K173T, Q174K, D177E, V179I, G196E, T200A, Q207A, R211K, V245Q, A272P, K275R, T286A, E291D, V292I, I293V, P294A, G335D, R356K, M357K, G359FS, A371V, I375V, T377LS, K390R, A400T, T403M, E432D, V435ICRF02_AG
 08TG.E505308TG.E5053FR715282D4T, 3TCNVPD67N, L210WY181C, G190GAV35T, V90I, D121H, K122E, D123E, I135T, I142V, S162A, K173R, Q174K, D177E, T200A, I202V, Q207E, V245Q, K281R, T286A, E291D, V292I, I293V, P294T, S322T, G335D, R356K, M357K, G359S, A371V, I375V, K390RCRF02_AG
Fokam (2011)CIRCB-10124CIRCB-10124JQ796164AZT, 3TCNVPM184VA98G, K103N, V108IV35T, T39A, V90I, K122KE, D123T, I135V, S162A, K173T, Q174K, D177E, T200A, Q207N, R211K, V245Q, E248D, K275Q, V276I, T286A, E291D, V292VI, I293V, P294T, E300K, S322TCRF02_AG
 CIRCB-10362CIRCB-10362JQ796169AZT, 3TCNVPM184V, T215FYK103N, M230LV35M, V90I, A98S, V111VG, I135V, S162A, K173T, Q174K, D177E, T200A, Q207D, R211K, K275R, L283LI, T286A, I293V, P294T, S322A, G335DCRF02_AG
 CIRCB-10613CIRCB-10613JQ796174AZT, 3TCNVPM184V, T215YK103NP1PA, K11T, I31L, V35IT, T39K, K43E, E44ED, K49KR, V90I, K122E, D123G, E138G, S162A, K173T, Q174K, D177E, V179I, T200A, I202V, Q207A, L210LMPT, R211K, V245Q, T286A, E291D, V292I, I293V, P294T, S322ACRF02_AG
Billong (2013)MR086MR086KF192144NRTINNRTIM184IK103N, Y188HP4S, V35T, T39M, V90I, S162A, K173T, Q174K, D177E, Q197EK, T200A, Q207E, R211K, V245E, E248Q, T286A, E291D, V292I, I293V, P294A, S322T, I326V, G335DCRF02_AG