<!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

Reverse Transcriptase Inhibitors

Subtype C
Gene RT
Mutation K101E
Rx >= 1 NNRTI
(+/- NRTI)
IncludeMixtures No
References 28
Patients 220
Isolates 237
 
Show mutation frequency as:
Exclude mutations:

Sequences matching input query are shown below. Original reference, patient identifier, isolate name, partial treatment histories and accession number are indicated. Complete treatment histories, when available, can be accessed by clicking the isolate name. Sequences may additionally be downloaded in the fasta format, or viewed as individual or composite alignments using the options above. If the user wishes to view individual alignments of isolates for which there are multiple clones, the user can choose to view either an alignment of consensus sequences derived from the clones or an alignment of each clone as well as a consensus sequence.

Author (yr) Patient Isolate Acc# NRTIs NNRTIsNRTIDRMs NNRTIDRMs OtherMutSubtype
Johnston (2003)TC-60TC-60 DDI, ABCEFVK65RK101E, V106M, V108VIV35T, T39A, S48T, K122P, D123S, K166R, K173T, Q174K, D177E, I178L, Q207E, F214L, V245Q, E248D, A272P, K277R, T286A, E291D, V292I, I293VC
Montes (2004)MB_patNIB01_NIB719AJ577965AZT, DDI, 3TC, ABCEFVK65R, L74V, M184VL100I, K101E, K103N, V106MK20R, V35T, E36A, T39E, S48T, K122E, D123N, K173A, D177E, T200A, Q207E, R211KC
Non-B Workgroup (2005)UK1125UK1125AY901329D4T, DDI, AZT, 3TCNVP K101E, Y181CV35T, T39D, S48T, V60I, D121Y, K122E, I135R, S162A, K173A, Q174R, D177E, T200A, Q207E, R211KC
 SA77_DR19SA77_DR19AY901711AZT, DDIEFVM41L, D67E, L210W, T215YK101E, V106M, G190A, F227FLV8VA, V35I, T39E, E53D, T69S, K122E, D123S, S162C, E169A, K173T, Q174K, D177E, T200A, Q207E, R211K, V245Q, D250DE, A272P, K277KR, E291D, V292VIC
 TK2024TK2024b D4T, 3TC, AZT, DDIEFVM184VK101E, V106M, G190AV35T, E36A, T39E, W88C, K122E, D123S, E138A, K173T, Q174K, D177E, T200P, Q207N, L209LV, R211K, F214L, V245Q, S268C, A272P, K275R, E291D, V292I, I293V, V317AC
 TK3007TK3007b ABC, D4T, DDI, AZT, 3TCEFVM184VK101E, V106ME28A, V35T, T39AV, S48T, K122E, D123S, S162AD, K173T, D177E, T200A, Q207E, P243T, V245Q, E291D, V292I, I293V, E312EGC
  TK3007c ABC, D4T, DDI, AZT, 3TCEFVM184VK101E, V106M, F227FLE28A, V35T, T39A, S48T, R83RK, K122E, D123S, S162A, K173T, D177E, T200A, Q207E, P243T, V245Q, E291D, V292I, I293VC
 TK3035TK3035 AZT, 3TC, D4T, DDI, ABCNVP, EFVM41L, D67N, K70R, L74I, L210W, T215Y, K219EK101E, G190A, K238TV35T, E36A, T39E, V60I, K122E, D123S, I135T, E138A, R172RK, K173T, Q174K, T200A, E203K, Q207E, R211K, D218DE, V245Q, E248D, A272P, K275R, Q278H, E291D, V292I, I293V, G316E, V317VG, Y319XC
 TK4001TK4001 AZT, 3TCNVPM184VK101E, G190AV35T, T39E, S48T, K104R, K122E, D123N, I135IT, K173A, D177E, Q197K, T200A, Q207E, V245Q, A272P, K277R, E291D, V292I, I293V, K311KR, V314X, V317VAC
 PL3405796049 AZT, 3TC, DDI, TDFNVPD67T, K70R, T215F, K219EK101E, Y181C, G190AV8I, P9PL, V35T, T39D, V60I, T69N, K102Q, V118I, D121H, K122E, I135RT, I142V, S162SN, K166R, D177E, T200A, Q207E, R211K, F214L, V245H, E248D, D250E, A272P, K277R, T286A, E291D, V292I, I293V, E300QC
 PL3830764461 AZT, DDIEFVD67N, K70R, T215F, K219QK101E, K103N, V106VM, G190GAE28K, V35T, T39E, S48T, V60I, T69TN, K122E, D123N, K166R, K173A, D177E, T200A, I202V, Q207G, R211K, V245Q, A272P, K277KR, T286A, E291D, V292I, I293V, D324E, I329VC
Weber (2005)F26249F26249AY677547AZT, D4T, 3TC, ABCEFV K101E, Y181C, G190SV35T, T69N, K102Q, K122E, D123G, R172RI, K173T, Q174K, D177E, T200A, Q207E, D218DY, V245Q, E248ED, D250E, A272P, K277R, E291D, V292I, I293VC
Baxter (2006)48-22542254-30930DQ877888NRTINNRTID67N, K70R, M184V, T215F, K219WA98G, K101E, V108I, Y181CV8VI, K20R, E28K, K32E, V35K, T39E, V118I, K122E, D123S, I135T, E138A, K173A, D177G, V179I, T200A, E203K, L205F, Q207D, H208Y, L210S, R211K, D218E, K223Q, L228H, Q242K, V245Q, K275Q, T286A, E291D, V292I, I293V, Q334E, G335D, R356K, M357R, G359T, T377L, K385R, K390RC
Doualla-Bell (2006)Pt16FDB_Pt16EF434880AZT, DDI, 3TCNVPK65R, M184VK101E, Y181C, G190AT27S, V35T, T39E, S48T, K122E, D123G, T139TK, S162C, K173A, Q174K, D177E, I178L, T200A, Q207D, R211K, L228R, V245Q, A272S, K277R, E291D, V292I, I293VC
Novitsky (2007)15991599_2995EF026213AZT, DDINNRTID67N, K70R, T215F, K219KEK101E, K103NE28K, K32E, V35T, E36A, T39E, S48T, K122E, D123G, E138G, K173A, Q197K, T200E, Q207E, V245Q, A272P, K277R, T286A, E291D, V292IC
Sen (2007)T100NPT100-PLEF186970AZT, 3TCNVPM41L, D67N, K70R, V75M, M184V, T215YK101E, G190AT27S, E28K, V35T, T39D, S48T, V60I, D121H, K122E, I142V, K166R, D177E, I178F, I180V, T200A, Q207E, H208HY, R211K, V245Q, A272P, K277R, E291D, V292I, I293V, P294T, G335D, Y342F, R356K, M357MR, G359T, T377M, K390RC
 T110NPT110-PLEF186982D4T, 3TCNVPD67N, K70R, M184V, K219QA98G, K101E, G190AK32E, V35K, E36A, T39D, I47IL, S48T, V60I, T69A, D121Y, K122E, I135K, S162A, K173T, Q174K, D177E, V179VI, T200A, E203K, Q207E, R211K, V245Q, A272P, K277R, E291D, V292I, I293V, Q334N, G335D, K350R, R356K, G359T, T377MC
Marconi (2008)ICH02ICH02EU307997D4T, 3TCEFVD67N, M184VK101E, V106M, G190AS48T, E53D, V60I, R83K, K122E, I135V, K173A, Q174R, D177E, I178L, E194Q, T200A, Q207E, R211K, V245QC
 ICH10ICH10EU308003D4T, 3TC, AZTEFV, NVPK70KR, M184VK101E, V106MK122E, D123S, K173V, Q174K, D177E, T200A, Q207G, R211K, F214L, V245QC
 ICH19ICH19EU308010D4T, 3TCEFVD67N, K70R, M184VK101E, Y181YC, G190AS48T, V60I, K122E, D123G, K173A, D177E, T200A, Q207E, R211K, V245QC
 ICH21ICH21EU308012AZT, 3TCEFVM184V, T215FK101E, G190CK122E, D123S, I135T, K173A, D177E, V189I, T200A, Q207E, R211K, V245QC
 SW002sw002EU308021D4T, 3TCEFVM184VK101E, Y188LK122E, D123DG, G141GR, K173T, Q174K, V179I, T200A, Q207E, R211K, V245LC
 SW089SW089EU308098D4T, 3TCEFVM41ML, M184VK101E, G190AE44EV, V60I, W88C, K122E, D123G, K173A, D177E, T200A, Q207E, R211K, V245EC
Pillay (2008)DR1902ZA.DR19AY589880AZT, DDIEFVM41L, D67E, T69S_SS, L210W, T215YK101E, V106M, G190A, F227FLV8VA, V35I, T39E, E53D, K122E, D123S, S162C, E169A, K173T, Q174K, D177E, T200A, Q207E, R211K, V245Q, D250DE, A272P, K277KR, E291D, V292VIC
Deshpande (2009)Pat25208artFJ530689AZT, 3TCEFVK70KT, M184VA98G, K101E, V108IV35T, T39D, S48T, G99GR, L120LF, K122E, D123S, I135K, S162A, K173A, D177E, R199RS, T200A, E203K, Q207D, K220KQC
 Pat22943artFJ530712NRTINNRTIM41ML, M184V, T215FA98AG, K101E, Y181YC, G190AV35T, T39D, S48T, V60I, D121Y, K122E, I135KR, S162A, K173GIRV, D177E, D186DN, T200A, Q207E, R211K, V245QC
 Pat22550artFJ530716AZT, 3TCNVPM41L, D67N, M184V, T215YA98AG, K101E, Y181C, G190AV35T, T39E, E44DY, S117SA, V118VI, K122E, D123S, Q145QL, S162AD, E169EA, K173A, D177E, T200A, E203D, Q207D, H208Y, R211K, W212R, H221Y, Y232YH, V245Q, E248KC
 Pat21118RTFJ530730AZT, 3TCNVP, EFVM41L, D67N, V75M, F77L, M184V, T215YK101E, G190AE28KR, K32E, V35T, E36A, T39E, E44D, S48T, V60I, V118I, D121H, K122E, I135T, S162A, E169A, K173A, Q174K, N175Y, D177E, T200A, E203D, Q207E, H208Y, V245QC
 Pat20429RTFJ530737D4T, 3TCNVPK65R, F116Y, Q151M, M184VK101E, Y181C, G190AE28K, K32E, V35T, E36A, T39D, V60I, S68G, K102Q, D121Y, K122E, I135T, K173I, Q174K, D177E, I178L, T200A, Q207K, R211KQ, F214FL, V245QC
 Pat20331RTFJ530738AZT, 3TC, D4TNVPM41L, D67N, T69D, M184V, T215YA98G, K101E, Y181C, G190AV35T, T39E, E44Y, S117A, K122E, D123S, I132IT, S162A, P170PS, K173A, D177E, T200A, E203D, Q207D, H208Y, R211K, W212MR, H221Y, V245QC
 Pat19155RTFJ530750NRTINNRTIM41L, D67N, K70KR, M184I, T215Y, K219WK101E, Y181C, G190AE28A, V35T, T39D, E44ED, V60I, V90I, D121H, K122E, D123E, I135T, K173A, Q174R, D177E, V179A, T200A, Q207E, H208HY, R211K, D218E, V245QC
 Pat18765RTFJ530754AZT, 3TC, D4TNVPM184V, T215YK101E, K103NS, G190AI2N, E28K, V35T, T39H, S48T, V60I, K122E, D123S, I142V, K166R, K173A, Q174R, D177E, I178L, Q207E, R211K, V245QC
 Pat17786RTFJ530764D4T, 3TCNVPM184V, T215FA98G, K101E, G190SE28K, V35T, T39E, S48T, V60I, D121Y, K122E, I135L, Q151QH, K173T, D177E, T200A, Q207E, R211KC
 Pat168108RTFJ530773D4T, 3TCNVPD67N, K70R, M184V, K219QK101E, G190AV35T, T39E, S48T, V60I, D121H, K122E, I135R, I142V, K166S, K173A, D177E, Q207N, R211KC
 Pat161138RTFJ530780D4T, 3TCNVPM184VK101E, G190AE28K, K32E, V35I, K102N, D121H, K122E, D123S, K173A, Q174K, D177E, Q207E, R211K, V245QC
 Pat150164RTFJ530791NRTINNRTIM41L, D67N, L74LV, V75M, M184V, L210W, T215Y, K219KRK101E, K103KN, V106A, G190GA, F227LK20R, V35T, T39D, E44A, S48T, V60I, K82KR, A98AS, K122E, I135L, E138A, I142IV, K166R, K173A, I178L, V179I, T200A, Q207D, H208Y, R211KC
 Pat144176RTFJ530797NRTINNRTIM41L, D67N, K70R, M184V, L210W, T215F, K219QK101EE28A, V35T, T39E, V60I, I94IL, Q151QH, S162T, K173A, D177E, I178M, I195L, G196E, T200A, Q207E, R211KC
 Pat143178RTFJ530798NRTINNRTIM184VK101E, G190AV35PT, T39N, K43KM, S48T, V60I, K122E, K173A, Q174R, D177E, I178M, T200A, Q207A, R211KC
 Pat134195RTFJ530807NRTINNRTIM184MVK101E, Y181YC, G190GAV35T, T39N, V60I, V90VI, D121H, K122E, I135R, S162N, D177E, T200A, Q207A, R211K, H221Y, V245QC
 Pat126208RTFJ530815NRTINNRTIM41L, D67N, L74I, M184V, L210W, T215Y, K219NA98G, K101E, V108I, Y181CK20R, K32T, V35K, T39D, E44D, S48T, V60I, V118I, D121Y, K122E, I135R, S162A, K173ST, V189I, T200A, E203V, Q207E, H208HY, R211K, K223Q, T240KC
 Pat124210RTFJ530817NRTINNRTID67N, K70R, M184V, T215V, K219QK101EK20KR, T27S, V35T, T39D, K49R, V60I, T69N, K122E, D123DN, I135R, S162D, K166R, Q174R, D177E, V179I, T200A, I202V, Q207E, R211K, V245QC
 Pat078283RTFJ530863AZT, 3TCNVPM41L, V75M, M184V, T215YA98G, K101E, G190AV35T, E36A, T39D, S48T, V60I, K122E, I135L, K173V, D177E, T200A, Q207E, V245QC
 Pat058328aRTFJ530883NRTINNRTIM41L, D67N, K70R, V75M, M184V, T215Y, K219EK101E, K103N, G190AE28A, K32E, V35T, E36A, T39D, V60I, S105T, K122E, D123N, I135K, S162A, I167V, E169A, K173A, D177N, T200A, Q207A, R211K, V245QC
 Pat051338aRTFJ530890NRTINNRTIM41L, D67N, K70R, L74LV, M184V, T215F, K219EK101E, K103KN, V106VILM, Y181C, G190GAV10VI, V35T, T39N, S48T, D121Y, K122E, I135R, S162A, K173T, D177E, T200A, I202IV, Q207E, R211K, D218DE, E224ED, D237DE, V245Q, D250DEC
 Pat036346FJ530905NRTINNRTID67N, M184V, T215YK101E, K103N, G190AV35T, T39N, V60I, K122E, I135K, K173A, Q174R, D177E, T200A, Q207E, R211K, V245QC
 Pat022391rtFJ530919AZT, D4TNVPM184I, T215YK101E, Y181CI31L, V35T, E36A, T39D, S48T, V60I, T69N, V90I, D121Y, K122E, S162A, K173T, D177E, T200A, Q207E, R211K, V245QC
 Pat019397rtFJ530922AZT, D4TNVPD67DN, K70KR, M184V, T215TIK101E, G190AV35T, E36A, T39D, V60I, D121H, K122E, I135K, K166R, K173T, D177E, I178L, V179VI, T200A, Q207QEGR, V245QC
 Pat017418rtFJ530924D4T, 3TCNVPM41L, D67N, M184V, T215YA98G, K101E, Y181V, G190AK32KQ, V35T, T39DN, S48T, V60I, D121Y, K122E, I135K, S162A, T165I, K173A, Q174R, D177E, I178L, T200A, Q207E, R211K, H221Y, V245QC
 Pat015421RTFJ530926AZT, 3TCNVPM41ML, D67N, K70R, M184V, T215Y, K219EA98AG, K101E, G190AV35T, T39E, V60I, K122E, I135R, S162C, K173T, D177E, T200A, Q207E, R211K, L228H, V245QC
Hoffmann (2009)pat028MD24064 AZT, 3TCEFVM184VK101E, E138K, Y188LT27S, V35T, E36A, T39E, S48T, P52S, K103R, K122E, D123S, I135V, S162C, K173T, D177E, T200A, Q207A, R211K, V245Q, A272PC
  MD118823 AZT, 3TCEFVM184VK101E, E138K, Y188L, G190AT27S, V35T, E36A, T39E, S48T, K103R, K122E, D123S, I135V, S162C, K173T, D177E, T200A, Q207A, R211K, V245Q, D250DE, A272PC
Hosseinipour (2009)73447344GQ228302D4T, 3TCNVPA62V, K70E, V75T, Q151M, M184VK101E, Y181C, G190AT39E, E40K, S48T, K104R, K122E, D123N, K173T, Q174R, I178L, T200A, Q207E, R211K, F214L, L228H, V245KC
 89908990GQ228310D4T, 3TCNVPD67N, K70R, M184V, K219QK101E, G190A, K238KTT39E, E53D, K122E, D123S, I135T, A158S, K173A, Q174K, D177E, I178M, G196K, T200E, Q207E, R211K, L228Q, V245QC
 89348934GQ228314D4T, 3TCNVPF116Y, Q151M, M184VK101E, G190AT39E, S48T, K122E, D123G, S162C, K173A, Q174K, D177E, T200A, Q207E, R211K, V245QC
 94439443GQ228342D4T, 3TCNVPD67N, M184V, T215YK101E, G190AT39K, K43E, S48T, V60I, D123E, K173AT, D177E, T200A, Q207G, R211K, K238KRC
 94579457GQ228343D4T, 3TCNVPD67N, M184V, L210W, T215YA98G, K101E, V108I, Y181CT39E, E44ED, S48T, K49R, V118VI, K122E, D123S, I135R, K173A, D177E, V179VI, T200A, E203K, Q207D, H208Y, R211K, H221Y, V245QC
 93699369GQ228358D4T, 3TCNVPD67N, K70R, M184V, T215F, K219QA98G, K101E, G190A, P225HT39E, S48T, I94IL, K103R, K122E, D123N, K173T, Q174K, D177E, I195IM, T200A, Q207D, R211K, F214L, V245QC
 94229422GQ228364D4T, 3TCNVPD67N, K70R, M184V, T215F, K219QK101E, Y188WT39E, K49R, E53D, I94L, K122E, D123G, S162Y, K173A, Q174K, D177E, I178M, T200A, Q207N, R211K, V245QC
 94559455GQ228370D4T, 3TCNVPM184V, T215YK101E, G190AT39DE, S48T, K122E, D123S, S162C, K173T, Q174K, N175NY, T200A, Q207E, R211K, V245TC
 85038503GQ228377D4T, 3TCNVPK65R, T69~, K219RK101E, Y181C, G190AT39E, S48T, V60I, S68G, K122E, D123S, E138A, P157A, K173A, D177E, T200A, I202V, E204K, Q207A, L210S, R211K, F214L, H221Y, V245QC
Kassaye (2009)TCDD-28TC28_2004FJ445727AZT, 3TC, D4T, TDFNVPD67N, K70R, T215F, K219QK101E, Y181C, G190AV35T, T39E, S48T, V60I, T69N, K122E, D123G, I135T, E138A, I167V, K173A, Q174K, N175Y, T200A, I202V, Q207A, H221YC
Rajesh (2009)F9TRCFRT9FJ5953573TC, DDIEFVL74I, M184VK101E, V106M, G190A, F227LV35T, T39E, E40EG, D121Y, K122E, I159V, S162A, K173A, D177K, T200A, Q207G, R211T, I244IV, V245QC
Wallis (2009)TJC2540965TJC2540965 D4T, 3TCEFVM184VK101E, K103NE28K, K32E, V35T, E36A, T39E, S48T, K122E, D123DG, K173A, Q174K, I178L, T200A, E203EK, Q207A, R211K, V245Q, A272P, V276I, K277R, E291D, V292I, I293VC
 GT00565939GT00565939 AZT, 3TCNVPM184VK101E, G190AV35T, E36A, T39E, E53D, K122E, D123G, S134SR, I135V, E138EQ, S162SC, R172RK, K173A, Q174K, D177E, I178L, T200A, Q207D, R211K, V245Q, A272P, K275Q, K277R, T286A, E291D, V292I, I293VC
 TJC2407957TJC2407957 D4T, 3TCEFVD67DN, M184VK101E, K103N, V108VI, G190GAV35T, E36A, T39E, S48T, V60VI, K122E, D123N, I135R, K173A, Q174K, D177E, T200A, Q207A, R211K, V245Q, E248D, A272P, K277R, T286A, E291D, V292IC
 GT00057847GT00057847 AZT, 3TCEFVA62V, M184VK101E, G190VV35T, E36A, T39E, S48T, T58S, V90I, K122E, D123S, I135IT, N147NK, K173A, Q174K, D177E, T200A, E203G, Q207E, R211K, V245Q, K277R, T286A, E291D, V292I, I293V, E297KC
 TJC2415406TJC2415406 D4T, 3TCEFVM184VK101E, V106M, G190AP4S, V35T, E36A, T39E, S48T, K103R, K122E, D123N, I135V, S162C, K173T, Q174K, D177E, T200A, Q207E, R211K, F214L, V245Q, A272P, K275Q, T286TA, E291D, V292I, I293V, E297EKC
 23464402346440 D4T, 3TCNVPK65R, V75I, F116Y, Q151M, M184VK101E, G190A, F227LV35T, T39E, S48T, V60I, S68G, V118I, K122E, D123S, I132L, E138A, T139A, K173T, Q174K, D177E, V179I, T200A, I202V, E204D, Q207E, R211K, F214L, V245Q, A272S, T286A, E291D, V292I, I293V, V317A, I329LC
 TJC2368272TJC2368272 D4T, 3TCEFVD67N, M184VK101E, E138K, G190EK20R, E28G, V35T, T39E, S48T, K122E, D123S, Q174K, V179G, G196E, T200A, E203K, Q207E, R211K, V245Q, A272S, K275Q, K277R, T286A, E291D, V292I, I293V, P294T, I329V, Q334NC
 TJC2413549TJC2413549 D4T, 3TCEFVM184VK101E, V179DE, G190A, P225HE28EGKR, V35M, E36A, T39E, E40D, S48T, K103R, K122E, D123S, E138N, S162C, K173T, T200A, Q207D, R211K, V245Q, D250DE, A272P, Q278CNSY, K281R, E291D, V292I, I293V, L310CF, Q334NC
 TJC2379522TJC2379522 D4T, 3TCEFVM184VK101E, V106M, F227LV35T, T39E, S48T, V60I, S105A, I135V, K173T, Q174K, D177E, T200A, Q207E, R211K, V245E, A272P, K277R, E291D, V292I, I293VC
 GT00387892GT00387892 D4T, 3TCEFVD67N, M184VK101E, V106M, F227LK20R, V35T, T39E, S48T, T69S, K122E, K173A, Q174K, D177E, T200A, E204D, Q207E, R211K, F214L, V245Q, A272P, K277R, T286A, E291D, V292I, I293VC
 23628782362878 AZT, 3TCEFVD67N, K70R, M184V, T215F, K219QA98G, K101E, V106M, F227LK20R, V35I, T39D, E40D, S48T, T69TN, D86DE, W88S, K103R, L109I, V118VI, D121H, K122E, E138A, I142V, K173A, D177E, I178L, T200A, I202V, E204K, Q207E, R211K, F214L, V245Q, E248N, D250DN, A272P, T286A, E291D, V292I, I293VC
 22803922280392 AZT, 3TCEFVM184VK101E, V106M, G190AV35T, E36A, T39E, E40D, S48T, V60I, K122E, D123NS, K173I, Q174K, D177E, T200A, I202V, Q207E, R211K, P243T, V245Q, A272P, K277R, T286A, E291D, V292I, I293V, D324EC
 TJC2422791TJC2422791 AZT, 3TCEFVK65R, Y115FK101E, V106M, F227FLV21I, V35T, T39EK, S48T, V60I, D123E, T139TK, S162C, K173A, Q174R, D177E, I178L, I195M, T200A, Q207E, G231GR, V245Q, A272P, K277T, K281R, E291D, V292I, I293VC
 23499842349984 D4T, 3TCNVPK65R, V75I, F116Y, Q151M, M184VK101E, G190A, F227LV35T, T39E, S48T, V60I, S68G, V118I, K122E, D123S, I132L, E138A, T139A, K173T, Q174K, D177E, V179I, T200A, I202V, E204D, Q207E, R211K, F214L, V245Q, A272S, T286A, E291D, V292I, I293V, V317A, I329LC
 TJC2417303TJC2417303 D4T, 3TCNVPM184VK101E, Y181CV35T, E36A, T39E, S48T, K64R, V90I, K122E, D123N, K173A, Q174R, D177E, I178M, T200A, Q207E, R211K, V245Q, D250E, A272P, K277R, E291D, V292I, I293V, V317AC
 23330832333083 AZT, 3TCEFVD67N, K70R, M184V, T215Y, K219QK101E, K103NK20R, E28K, V35T, T39D, E44D, S48T, I94L, D121H, K122E, K173A, Q174K, D177E, T200E, I202V, E203K, Q207E, R211K, D218E, V245Q, D250E, S251D, A272P, L283I, R284RK, V292I, I293V, I309IV, S322AC
 23676422367642 D4T, 3TCEFVD67N, M184V, T215FK101E, V106M, G190AK20R, E28K, V35T, T39E, K122E, D123N, K173A, Q174R, D177E, I178L, T200A, Q207D, R211K, V245Q, E248T, A272P, K277R, E291D, V292IC
 GT00470140GT00470140 D4T, 3TCEFVD67N, M184V, T215F, K219QK101E, G190SV35T, T39E, K122E, D123N, I135L, E138A, K173A, D177E, T200A, Q207D, R211K, V245Q, E248D, A272P, R284K, E291D, V292I, I293VC
 GT00349623GT00349623 D4T, 3TCEFVM41L, M184V, T215FK101E, V106M, G190AV35T, T39E, K43R, S48T, V60I, K122E, I135IK, K173A, D177E, I178M, T200A, Q207E, V245Q, V254VA, A272P, Q278QH, K281*R, R284RG, E291D, V292I, I293V, V317AC
 TJC2367415TJC2367415 D4T, 3TCEFVM184VK101E, G190AK20R, V35T, E36A, T39D, S48T, V60I, V106I, T107Q, K122E, D123N, K173A, Q174K, D177E, I178L, T200A, Q207E, R211K, F214L, P236PS, V245Q, A272P, K277T, T286A, E291D, V292I, I293V, D324EC
 GT00011279GT00011279 D4T, 3TCEFVM184V, T215YA98G, K101E, Y181C, G190AI31L, V35R, E36A, T39DE, K122E, D123G, K173T, D177EG, I195L, T200A, Q207E, R211K, H221Y, V245E, A272P, K275R, K277R, Q278H, R284K, T286A, E291D, V292I, I293VC
Deshpande (2010)22IND42922IND429GU108155D4T, 3TCNVPM41L, D67N, M184V, L210W, T215YA98AG, K101E, V106VAMT, V108I, Y181IS, G190AK20R, V35T, T39D, E44D, K49R, V60I, I94L, V118I, K122E, D123S, I135T, S162A, T165L, K173A, D177E, V179I, V189VI, T200A, E203D, Q207E, R211K, H221Y, V245QC
 36IND43736IND437GU108163AZT, 3TCEFV, NVPM41L, D67N, K70R, M184V, T215F, K219QK101E, V106M, G190AE28K, K32E, V35T, E36A, T39D, S48T, V60I, V90I, I94L, D121Y, K122E, S162A, K173AT, D177E, V179VI, T200E, Q207R, R211DE, V245QC
 66IND44966IND449GU108175D4T, 3TCNVPD67N, M184V, T215F, K219WK101E, Y181C, G190AV35T, T39E, S48T, V60I, V118I, D121H, K122E, I135R, T139K, S162D, K173T, V179I, T200A, Q207E, H208Y, R211K, K223E, V245Q, D250EC
El-Khatib (2010)Pat00610ZA_SAVE1048HQ012284D4T, 3TCEFVD67DN, M184VK101E, V106M, G190AV35T, T39E, S48T, V60I, R83RK, K122E, E169EA, K173A, D177E, T200A, Q207E, R211K, V245QC
 Pat01210ZA_SAVE1161HQ012290AZT, 3TCNVPD67N, K70R, M184V, T215I, K219EK101E, V108VI, Y181CV35T, E36A, T39E, S48T, K122E, D123G, T139K, K166R, K173I, Q174K, D177E, T200A, Q207E, R211K, V245QC
 Pat01810ZA_SAVE1252HQ012296D4T, 3TCEFVM184VK101E, V108VI, G190A, M230LV35T, E36A, T39E, S48T, V60I, K122E, D123S, K173A, D177E, T200A, Q207A, R211K, H221HY, P243T, V245Q, D250EC
 Pat03010ZA_SAVE1500HQ012308D4T, 3TCNVPM184VK101E, V106M, F227FLK13KN, V35T, E36A, T39E, S48T, K122E, D123DG, E138A, S162C, K173A, Q174K, T200A, E204D, Q207D, R211K, V245K, E248D, K249QC
 Pat05210ZA_SAVE2285HQ012330D4T, 3TCEFVD67N, M184VK101E, V106M, G190AK20R, V35T, T39G, S48T, K103R, K122E, D123N, S162A, K173T, G196K, T200A, Q207G, R211K, F214L, L228LFHY, V245QC
 Pat06710ZA_SAVE2424HQ012345D4T, 3TCEFVM184MVK101E, V106MV35T, E36A, T39E, S48T, K122E, D123S, I142T, Y144F, K173A, I178L, T200A, E204K, Q207D, R211K, V245QC
 Pat06910ZA_SAVE2430HQ012347D4T, 3TCEFVM184VK101E, V106M, Y188YCE29ED, V35T, E36A, T39E, S48T, V60I, K122E, D123G, I132V, K173A, Q174K, D177E, T200A, Q207E, F214L, V245QC
Green (2011)707PKE35F707PKE35FHM623522D4T, 3TCEFVT69TADN, M184V, T215TIK101E, Y181C, G190SV8VA, E28K, V35T, T39E, W88WC, V118I, K122E, D123N, T165I, K166KR, K173A, Q174K, D177E, T200A, Q207E, L210LS, F214L, H221Y, V245Q, A272P, K275KQ, K281R, T286A, E291D, V292I, E297EK, Q334DC
 707PKE51F707PKE51FHM623533D4T, 3TC, AZT, DDIEFVD67N, K70R, T215TFIS, K219QK101E, V106M, V179VDK32R, V35T, T39N, E40D, V60I, T69TN, K122E, D123S, T139TS, K173A, Q174K, D177E, I178LV, T200A, E203ED, Q207E, R211RK, F214L, V245Q, A272P, K277R, Q278H, K281R, T286A, E291D, V292I, I293V, E297KC
Ngo-Giang-Huong (2011)PHPT3789PHPT3789RTHQ996467D4T, 3TCNVPM184VK101E, G190AK32R, V35T, T39K, S48T, A98S, K122E, E138Q, K166R, K173A, Q174R, D177E, I178M, G196M, T200A, E203K, Q207DN, R211KQ, F214LC
Sigaloff (2011)GT00057847GT00057847_1JN381565AZT, 3TCEFVA62V, M184VK101E, G190VV35T, E36A, T39E, S48T, T58S, V90I, K122E, D123S, I135IT, N147NK, K173A, Q174K, D177E, T200A, E203G, Q207E, R211K, V245Q, K277R, T286A, E291D, V292I, I293V, E297KC
  GT00057847_2JN381566AZT, 3TCEFVA62V, M184VK101E, G190VV35T, E36A, T39E, S48T, T58S, V90I, K122E, D123S, N147K, K173A, Q174K, D177E, T200A, E203G, Q207E, R211K, V245Q, K277R, T286A, E291D, V292I, I293V, E297KC
 GT00312709GT00312709_1JN381600D4T, 3TCEFVM184V, T215YK101E, K103N, G190AP4S, E28K, V35T, T39E, S48T, K122E, D123S, I135T, S162G, K166R, K173T, D177E, T200A, Q207E, R211K, V245Q, A272P, K277R, T286A, E291D, V292I, I293VC
  GT00312709_2JN381601D4T, 3TCEFVM41L, M184V, L210L*W, T215YK101E, K103N, G190AP4S, E28K, V35T, T39E, S48T, K122E, D123S, I135T, S162A, K166R, K173T, D177E, D192DN, T200A, Q207E, R211K, L228LF, V245Q, A272P, K277R, T286A, E291D, V292I, I293VC
 GT00349623GT00349623JN381605D4T, 3TCEFVM41L, M184V, T215FK101E, V106M, G190AV35T, T39E, K43R, S48T, V60I, K122E, I135IK, K173A, D177E, I178M, T200A, Q207E, V245Q, V254VA, A272P, Q278QH, K281*R, R284RG, E291D, V292I, I293V, V317AC
 GT00387892GT00387892_1JN381612D4T, 3TCEFVD67N, M184VK101E, V106M, F227LK20R, V35T, T39E, S48T, T69S, K122E, K173A, Q174K, D177E, T200A, E204D, Q207E, R211K, F214L, V245Q, A272P, K277R, T286A, E291D, V292I, I293VC
  GT00387892_2JN381613D4T, 3TCEFVD67N, M184VK101E, V106M, F227LK20R, V35T, T39E, S48T, T69S, K122E, K173A, Q174K, D177E, T200A, E204D, Q207E, R211K, F214L, V245Q, A272P, K277R, T286A, E291D, V292I, I293VC
van Zyl (2011)A103A103JN638067D4T, 3TCNVP K101E, V106MT27S, V35T, T39E, S48T, K122E, D123N, S162A, K173T, D177E, T200A, Q207E, R211K, V245Q, D250EC
 A184A184JN638109D4T, 3TCEFVM184VK101E, V106M, G190AK20KR, V35T, T39E, S48T, V60I, K122E, D123S, I135IT, K166R, K173I, Q174K, D177E, T200A, Q207A, R211K, F214L, V245QC
 A188A188JN638110D4T, 3TCNVPM184VK101E, G190AV35T, E36A, T39E, S48T, I142V, K173A, Q174K, D177N, T200A, Q207E, R211Q, V245QC
 A191A191JN638112AZT, 3TCNVPD67N, M184VK101E, G190AV35T, T39E, S48T, V60I, W71WG, K122E, D123G, K173T, D177E, T200A, Q207E, V245QC
 A205A205JN638124D4T, 3TCNVPM184VK101E, G190AV35T, T39E, E53D, R83K, K122E, D123G, S162A, K173A, D177E, T200A, Q207E, R211K, V245QC
 A255A255JN638151AZT, 3TCNVPM184VA98G, K101E, Y181YC, G190AV35T, E36A, T39E, S48T, E53D, K122E, F171Y, K173T, D177E, I178L, T200A, Q207K, R211K, V245RC
 A314A314JN638191AZT, 3TCNVPM184VK101E, G190AV35T, E36A, T39E, K122E, D123N, K173A, Q174K, D177E, T200A, Q207E, R211K, V245QC
 A67A67JN638220D4T, 3TCNVPM184VK101E, G190AV35T, E36A, T39E, S48T, K122E, D123G, K166R, K173T, Q174K, D177E, I178M, T200A, Q207E, R211K, V245QC
 A82A82JN638227D4T, 3TCEFVM184VK101E, V106ME6K, V35T, E36A, T39E, S48T, V60I, K122E, K173T, D177E, T200A, Q207E, R211K, V245QC
Brehm (2012)33ZA33ZA.96JN601965D4T, 3TCEFVM184VK101E, K103N, V108VI, P225HK20R, V35T, T39A, E40D, K122E, D123S, I135R, S162C, K173A, T200A, Q207A, R211K, F214L, V245Q, E248D, D250E, A272P, K277R, T286A, E291D, V292I, I293V, V317A, Q334H, G335D, R356K, G359T, T377L, K390R, A400T, E404D, E432D, V435A, A445G, E449D, V466I, V467I, T470P, D471EK, T477A, Q480H, H483Q, L491S, Q509QL, S519N, K527N, K530R, V531I, A534S, A554KC
 55ZA55ZA.96JN602012D4T, 3TCEFVD67N, K70R, M184V, K219EK101E, V106M, F227FLM16T, V35T, E36A, T39E, S48T, V60I, D121H, K122E, K173T, Q174K, D177E, T200A, Q207E, V245Q, A272P, K277R, T286A, E291D, V292I, I293V, Q334D, G335D, R356K, G359T, T377L, K390R, A400I, E404D, E432D, V435VA, A446S, N447H, L452K, V466I, V467I, S468N, T470S, D471E, T477A, H483Q, L491S, S519N, K530R, A534S, A554SC
Kouri (2012)CU1316-09CU1316-09JQ585291NRTINNRTIM41L, L74V, M184V, L210LW, T215YK101E, Y181C, G190AV35T, E36A, T39D, N57K, K64N, R72S, F87L, P97H, F116S, S117P, K122E, D123G, I142V, K173IT, D177E, T200A, Q207R, R211K, V245Q, A272P, K277R, E291D, V292I, I329IV, Q334D, G335DC
 CU728-10CU728-10JQ585411NRTINNRTIM41ML, K70R, L210W, T215Y, K219EA98G, K101E, Y181C, G190AE28K, K32E, V35IT, E36A, T39D, E44D, V60I, K66E, V118I, K122E, S162C, K173T, D177E, V179I, T200A, E203K, Q207E, H208HY, R211Q, D218E, L228R, V245Q, A272P, K277R, E291D, V292I, E298ED, Q334D, G335DC
 CU1737-09CU1737-09JQ585309NRTINNRTIM41L, V75M, F77FL, M184V, T215YA98G, K101E, Y181C, G190A, P225PHV35K, T39D, K122E, D123S, I135T, K173T, D177E, T200A, Q207KR, R211Q, L228R, V245Q, A272P, E291D, V292I, I326V, Q334D, G335DC
 CU1124-09CU1124-09JQ585275NRTINNRTIM41L, V75M, M184V, T215YA98G, K101E, Y181C, G190A, P225HV35K, T39D, V111VM, V118VM, K122E, D123S, I135T, K173T, D177E, T200A, Q207KR, R211Q, L228R, V245Q, A272P, E291D, V292I, I326V, Q334D, G335DC
Hoffmann (2013)324161324161KJ081304TDF, FTCEFV K101E, V106MV35T, E36A, T39E, S48T, K122E, K173A, D177E, T200A, Q207N, V245Q, D250EC
Sunpath (2013)CAS092CAS092 TDF, 3TCEFVK65RK101E, V106M, F227LV35T, T39E, S48T, V60I, K122E, I135K, K173A, Q174K, D177E, I178L, G196E, T200A, E204K, Q207E, R211K, V245E, D250E, A272P, T286A, E291D, V292I, I293VC
 CAS109CAS109 TDF, 3TCEFVK65R, T69~K101E, E138K, G190EV35T, E36A, T39E, S48T, V90I, K122E, K173T, D177E, T200A, Q207E, V245K, A272P, R284K, T286A, E291D, V292I, I293VC
 CAS057CAS057 TDF, 3TCEFVD67GK101E, V106ME6K, V35T, T39E, S48T, V60I, T69N, K122E, D123S, I135V, I142V, S162C, K173A, Q174R, D177E, I178L, T200A, Q207E, R211K, H221Y, V245Q, A272P, K277R, T286A, E291D, V292I, I293V, D324EC
 CAS014CAS014 TDF, D4T, AZT, 3TCNVP, EFVD67DN, M184VK101E, V106M, G190AV35T, T39E, S48T, V60I, K122E, D123S, K173T, D177E, T200A, Q207A, F214L, V245Q, A272P, K277R, T286A, E291D, V292I, I293VC
Van Zyl (2013)182966KC423910D4T, 3TCEFVK65R, T69~, V75MK101E, V106M, Y181C, G190AV35T, E36A, T39D, S48T, D86E, K122E, S162C, K173A, Q174K, D177E, I178L, T200A, E204D, Q207E, R211K, V245QC
 7571551KC423223D4T, 3TCEFVM184VK101E, V106M, F227LV35T, T39E, S48T, K122E, K173T, D177E, T200A, Q207E, V245QC
 82758KC423818AZT, D4T, 3TC, TDFNVP, EFVD67N, K70E, M184VK101E, K103N, V108I, G190AK22R, V35T, T39E, V60I, T69N, A98S, D121H, K122E, D123S, P133L, S134V, I135K, S163T, T165TI, K173T, Q174K, D177E, I178MC
 16112450KC423717AZT, 3TCNVPM184VK101E, G190AV35T, E36A, T39E, S48T, K122E, K173A, Q174K, D177E, T200A, Q207E, R211KC
 8811591KC423253AZT, D4T, 3TCNVP, EFVM184VK101EK20KR, E28K, K32E, V35T, E36A, T39E, S48T, V60I, K122E, D123G, K173A, Q174K, D177E, I178L, V179I, G196E, T200A, Q207A, F214L, V245QC
 17793064KC423951D4T, 3TCNVPD67N, K70R, M184V, K219EK101E, V106AV35T, T39K, S48T, K122E, D123N, D177DG, T200A, Q207E, V245Q, D250EC
 9561944KC423527D4T, 3TCEFVD67DN, K70R, M184V, K219KQK101E, V106ME6K, E28K, V35T, T39E, S48T, V60I, K122E, D123G, I135V, K173T, D177E, T200A, E203K, Q207E, R211K, V245KC
 2581835KC423448D4T, 3TCEFVV75M, F77L, M184V, T215FK101E, K103S, G190AE6D, K11T, E28K, K32E, V35T, E36A, T39E, K122E, D123N, I135T, K173T, T200A, Q207E, R211KC
 200115KC422915D4T, 3TCEFVK65KR, D67G, K70KE, M184MV, K219KEGRK101E, V106M, Y181YC, G190AV35T, E36A, T39E, E40D, S48T, S68SG, W88S, L109LI, K122E, D123S, I135IL, E138EQ, I142IV, K166R, K173A, D177E, I178L, T200A, E204K, Q207D, R211K, F214L, V245Q, T286A, E291D, V292I, I293V, I329LC
 14511218KC422969AZT, 3TCNVPD67N, K70R, M184V, T215TFISK101E, G190AE28K, V35T, T39E, S48T, K122E, K173A, Q174K, D177E, T200A, E203EK, Q207E, R211K, V245HPQ, E248NC
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