<!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

Integrase Inhibitors

Subtype CRF01_AE
Gene IN
Mutation Q95S
Rx II-naive
IncludeMixtures No
References 4
Patients 8
Isolates 8
 
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Sequences matching input query are shown below. Original reference, patient identifier, isolate name, partial treatment histories and accession number are indicated. Complete treatment histories, when available, can be accessed by clicking the isolate name. Sequences may additionally be downloaded in the fasta format, or viewed as individual or composite alignments using the options above. If the user wishes to view individual alignments of isolates for which there are multiple clones, the user can choose to view either an alignment of consensus sequences derived from the clones or an alignment of each clone as well as a consensus sequence.

Author (yr) Patient Isolate Acc# INIs WksINIMajorDRMs INIMinorDRMs OtherMutSubtype
Tovanabutra (2004)99THOUR199I99_199IAY358039None   K14R, A21T, V31I, S39N, I72V, Q95S, T112V, T124A, T125A, G134N, I135V, K136R, D167E, V201I, L234I, S283GCRF01_AE
 99THOUR202I99_202IAY358047None   K14R, A21T, V31I, S39N, I72V, Q95S, T112V, T124A, T125A, G134N, I135V, K136R, D167E, V201I, L234I, S283GCRF01_AE
 99THOUR203I99_203IAY358048None   K14R, A21T, V31I, S39N, I72V, Q95S, T112V, T124A, T125A, G134N, I135V, K136R, D167E, V201I, L234I, S283GCRF01_AE
 00THOUR200I00_200IAY358066None   K14R, A21T, V31I, S39N, I72V, Q95S, T112V, T124A, T125A, G134N, I135V, K136R, D167E, V201I, L234I, S283GCRF01_AE
Luu (2012)IVVI00100IVVI00100JQ288843None   E11D, A21T, V31VI, S39N, I72V, P90S, Q95S, T112V, T124A, T125A, G134N, I135V, K136Q, D167E, V201I, L234I, S283GCRF01_AE
Rolland (2012)AA020a_wg2AA020a_wg2JX446927None   A21T, S39N, I72V, Q95S, T112V, T124G, T125A, K127R, G134N, I135V, K136R, D167E, V201I, I208M, L234I, S283GCRF01_AE
Nerrienet (2014)Q0208194Q0208194JN675719None   D3E, E10D, K14R, N18L, A21P, A23D, A38AT, S39SG, I72V, Q95S, T112V, T124A, T125A, G134N, I135V, K136R, V201I, L234I, S283GCRF01_AE
 T0807129T0807129JN675730None   K14R, A21T, D25E, V31I, S39N, I72V, Q95S, T112V, T124A, T125A, G134N, I135V, K136Q, V165I, V201I, L234I, S283GCRF01_AE