<!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

Integrase Inhibitors

Subtype B
Gene IN
Mutation T97A
Rx II-naive
IncludeMixtures No
References 12
Patients 20
Isolates 20
 
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Sequences matching input query are shown below. Original reference, patient identifier, isolate name, partial treatment histories and accession number are indicated. Complete treatment histories, when available, can be accessed by clicking the isolate name. Sequences may additionally be downloaded in the fasta format, or viewed as individual or composite alignments using the options above. If the user wishes to view individual alignments of isolates for which there are multiple clones, the user can choose to view either an alignment of consensus sequences derived from the clones or an alignment of each clone as well as a consensus sequence.

Author (yr) Patient Isolate Acc# INIs WksINIMajorDRMs INIMinorDRMs OtherMutSubtype
Brennan (2007)01BAB09401BAB094EF150565None  T97AD6N, K7E, S39C, M50I, L74I, A91E, L101I, S119R, T125AB
 01BAB09801BAB098EF150623None  T97AD6E, E10D, L45V, M50I, I72V, I84L, A91T, L101I, S119R, T124A, T125A, V201I, T218SB
Sa-Filho (2007)BREPM1027BREPM1027EF637054None  T97A, V151ID6T, K7E, E11D, E13D, V31I, M50T, I72V, L101I, K156RB
Brumme (2009)INT_3639INT_3639FJ813090None  T97AE11ED, V31I, I72IV, L101I, K103R, K111T, S119T, T125A, V126T, D167DE, V201I, T206S, I208L, E212A, T218TS, S230N, D232EB
 INT_3986INT_3986FJ813437None  T97AE11D, V31I, I72V, I84IM, L101I, K103R, K111T, S119T, T125A, V126T, V201I, T206S, I208L, E212A, T218S, S230N, D232EB
 Q4546Q4546GQ372111None  T97A, P145PLA91E, L101I, G106A, T112TA, S119R, T124AD, I135V, I203M, I208L, K211R, E212IK, D256E, S283GB
 Z0528Z0528GQ372296None  T97AV31I, M50I, G163A, K211R, S230NB
Low (2009)ahi104ahi104_04FJ786372None  T97AE11D, R20K, M22L, V37I, S39C, I72V, L101I, K111T, I113V, T122I, T124A, T125A, V201I, K211R, S283GB
van Hal (2009)W96W96FJ554769None  T97AI72V, A265VB
 W98W98FJ554771None  T97AV31I, T124A, T206SB
Sanabani (2011)BR1115BR1115JN692479None  T97AV31I, S119T, T124N, T125A, V126L, I141V, I203M, D256EB
Armenia (2012)PT_12PT_12_BLJN544084None  T97AL101I, S283GB
Garrido (2012)BAA295937BAA295937JQ716912None  T97AE11D, S24G, D25E, L45V, M50I, L101I, T125A, F181L, T206S, D256E, S283G, D288NB
Iamarino (2012)B.BR.1239B.BR.1239JN234134None  T97A, V151IE11D, S17C, M50I, I72V, L101I, K211RB
Rolland (2012)AA040a_WG13AA040a_WG13JX447158None E138KT97AG70E, L101I, S119R, T124N, T125S, M154I, K211RB
Li (2013)hnxy27hnxy27KC988074None  T97AV88I, A91T, L101I, K111R, S119R, T124N, T125S, K156N, K188R, K211RB
Reigadas (2013)123123JX425591None  T97AE69EV, A91E, L101I, S119R, T122I, T124S, T125A, F181L, V201I, L234I, V281LB
 129129JX425597None  T97AV31I, T93S, L101I, T124A, K156N, G163Q, V201I, D279G, D286NB
 143143JX425611None  V54I, T97AK14R, R20K, A21T, A23V, M50I, L101I, K160T, V201I, I203M, I204V, V281MB
 144144JX425612None  T97AE11D, V31I, K34R, L101I, T112V, T125V, K215N, D256EB