<!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

Integrase Inhibitors

Subtype B
Gene IN
Mutation T206S
Rx II-naive
IncludeMixtures No
References 55
Patients 464
Isolates 485
 
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Sequences matching input query are shown below. Original reference, patient identifier, isolate name, partial treatment histories and accession number are indicated. Complete treatment histories, when available, can be accessed by clicking the isolate name. Sequences may additionally be downloaded in the fasta format, or viewed as individual or composite alignments using the options above. If the user wishes to view individual alignments of isolates for which there are multiple clones, the user can choose to view either an alignment of consensus sequences derived from the clones or an alignment of each clone as well as a consensus sequence.

Author (yr) Patient Isolate Acc# INIs WksINIMajorDRMs INIMinorDRMs OtherMutSubtype
Reinke (2001)R101R101AF203329None   E11D, K14R, L28I, P30A, I72V, T124A, V150A, V201I, T206S, M275V, D286NB
 R106_1R106_1AF203331None   K111T, T124A, T206S, D286NB
Burns (2002)92BR02892BR028AF458231None   T206S, D256EB
Thomson (2002)A025A025AF408626None   S17N, A23V, S24G, L28I, I72V, T124A, K136N, V165I, T206S, T218S, L234I, D256E, S283GB
Kijak (2004)1918LE02CM.1918AY371169None   K14R, V31I, M50L, T112V, I113V, S119P, T124A, T125A, G163T, D167E, V201I, T206S, T218I, L234I, D256E, S283GB
McLaughlin (2004)98USHVTN941c198_941c1AY560110None   S24A, D25N, S119T, T124N, T125V, E198D, V201I, T206S, D256EB
Thomson (2004)99UFRJ_299UFRJ_2AY455780None   S17N, I72V, I84L, L101I, S119T, T124A, G163E, V165I, V201I, T206S, T218I, L234V, R284RG, D288NB
de Sa Filho (2005)BREPM107BREPM107AY771588None   S17N, V32I, S57N, I60M, I72V, S119T, M154I, V165I, V201I, T206S, L234V, D256E, V281M, S283GB
Carr (2006)101BA101BADQ826726None   K14R, V31I, M50L, T112V, S119P, T122I, T124A, T125A, D167E, V201I, T206S, T218I, L234I, D256E, V281M, S283GB
Galkin (2006)139089139089AY751407None  V151IE11D, R20K, V31VI, S39SN, L101I, T122I, T124A, T206SB
Sanchez (2006)PCM013PCM013AY561237None   S17N, I72V, S119T, T124A, T206S, E212G, I220L, Y227F, D253Y, A265V, R284GB
Andresen (2007)PMVL 025PMVL 025EF514702None   E11D, L101I, K111Q, K173R, F181L, V201I, T206S, E212V, T218I, D256EB
 CTL 035CTL 035EF514710None   E11D, R20K, V31I, M50I, T112I, T122I, T124N, F181L, V201I, T206S, D256EB
Badreddine (2007)J11233SB_J11233DQ375254None   K14R, S17N, L28I, S39C, L45V, M50I, I72IV, L101I, T112V, S119P, T124A, T125A, D167E, V201I, T206S, T218I, L234I, D256E, S283GB
 J11451SB_J11451DQ375268None   K14R, S39C, L101I, T112V, S119P, T122I, T124A, T125A, D167E, V201I, T206S, T218I, L234I, S283GB
 J11201SB_J11201DQ848138None   V32I, I72V, G106A, G193E, V201I, T206S, I220V, S230N, R231K, D278NB
 J11206SB_J11206DQ848139None   V32I, I72V, G193E, V201I, T206S, T218S, I220V, Y227F, S230N, R231K, D278NB
Brennan (2007)01BAB05801BAB058EF150552None   E11D, M50I, L101I, K111T, I113V, S119P, T124N, V201I, T206S, I220FB
 01BAB06101BAB061EF150553None   K7R, E11D, S24N, V31I, I72V, T122I, T124A, T206S, S283GB
 01BAB06201BAB062EF150554None  V151IE11D, V31I, L101I, D167E, S195C, T206S, Q216H, A265VB
 01BAB07501BAB075EF150560None   E10D, E11D, V31VI, I72V, K111T, T124N, V201I, T206S, S230N, L234I, D256E, S283GB
 01BAB08501BAB085EF150563None  V151IE10EA, E11ED, A21S, V31I, S119T, T206S, T218I, A265VB
 01BAB09301BAB093EF150564None   V31I, L101I, D167E, V201I, T206S, I217V, Y227F, S230N, A265VB
 01CEB04501CEB045EF150576None  V151ID6N, K7E, S17N, V31I, I72V, V77A, L101I, T125A, T206SB
 01CEB07101CEB071EF150584None   D6T, K7E, E10D, I72V, T122TI, V201I, T206SB
 01GOB03401GOB034EF150598None   D6T, E10D, E13D, L101I, T124N, E198D, T206S, D256EB
 153117-4153117-4EF150601None  V151IE11D, A23V, V31I, I72V, F181L, V201I, T206S, D256E, S283GB
 01BAB10701BAB107EF150608None   D6N, K14R, S17N, V31I, T125A, K156N, T206SB
 01BAB03401BAB034EF150619None   E11D, K14R, S17T, M50I, I72V, T124A, M154I, V165I, V201I, T206S, Y227F, L234V, D256E, S283GB
Lataillade (2007)482-023ML_482-023EF472723None   D6E, S17N, S119A, T124N, V126M, I135V, K156N, V201I, T206S, K211R, E212Q, K215N, D288NB
 53-9028ML_53-9028EF472739None   V31I, M50I, L101LI, T124A, T125A, I135V, K156N, G193R, T206S, Y227F, L234I, A265VB
 48-1275ML_48-1275EF472746None   K34R, I72V, L101I, T206S, A265VB
 27BML_27BEF472748None   V31I, M50I, L101I, T124A, T125A, I135V, K156N, G193R, T206S, Y227F, L234I, A265VB
 02-1435ML_02-1435EF472781None   R20K, A23V, I72V, L101I, T124A, M154L, F181L, V201I, T206S, K219KR, Y227F, E246ED, S255N, D256EB
 64BML_64BEF472785None   E10D, M50I, I72V, A80S, L101I, T206SB
 65BML_65BEF472786None   E10D, M50I, I72V, A80S, L101I, T206S, Q285XB
Li (2007)PS20082008_d0DQ676874None   K14R, L28I, P30A, S39C, M50I, G82GE, L101I, T124A, E152EK, E157EK, V201I, T206S, T218S, D253E, M275VB
  2008_d182DQ676875None   K14KR, D25DN, L28I, P30A, S39C, M50I, L101I, T124A, V201I, T206S, T218S, D253E, V259VI, M275VB
  2008_d377DQ676876None   K14R, L28I, P30A, S39C, M50I, L101I, T124A, V201I, T206S, T218S, D253E, M275VB
 PS20162016_d0DQ676877None   E11D, V31I, C56S, L101I, K111N, S119P, T122I, V201I, T206S, D256EB
  2016_d193DQ676878None   E11D, V31I, C56S, L101I, K111N, S119P, T122I, V201I, T206S, V249VI, D256EB
  2016_d380DQ676879None   E11D, V31I, C56S, L101I, K111N, S119P, T122I, V201I, T206S, D256EB
 PS20192019_d0DQ676880None   E11D, V31I, C56S, L101I, K111N, S119P, V201I, T206S, D256EB
  2019_d171DQ676881None   E11D, V31I, C56S, L101I, K111N, S119P, V201I, T206S, T218TI, D256EB
  2019_d367DQ676882None   E11D, V31I, C56S, L101I, K111N, S119P, V201I, T206S, Q214QH, T218TS, D256EB
Sa-Filho (2007)BREPM1033BREPM1033EF637050None  P145TE11D, A23V, S24G, L28I, V37I, I72V, T122I, V201I, T206SB
Van Baelen (2007)Pt55-1 None   D6E, K14R, V31I, A49T, Y99F, L101I, K111T, I113V, S119T, S123G, T124A, T125A, K127R, I135V, V201I, A205S, T206S, Q216K, S230N, D256EB
 Pt1111-1 None   E11D, S24N, V31I, M50I, L101I, K111T, S123G, K127R, T206S, D232E, D278EB
 Pt1818-2 None   D6E, E10D, E13D, E96D, L101I, S119R, S123G, T124A, K127R, T206S, S230N, D279G, S283G, R284GB
 Pt2121-1 None   S17N, M50I, L101I, S119P, T122I, S123G, T124A, K127R, T206S, D256EB
 Pt4141-2 None   D6E, E11D, S17N, A21T, L101I, K111T, I113V, T122I, S123G, T125A, K127R, T206SB
Buzon (2008)Pt8Pt8Y2001EU883817None   R20RK, F185Y, I203M, T206S, I208LB
 Pt12Pt12Y1993EU883823None   E11D, S17C, S39R, M50MI, I72V, K111KAET, I113IV, T206S, D256E, A265VB
  Pt12Y2001EU883824None   E11D, E13D, S17C, A23AV, S39R, I72V, L101I, K111A, T206S, D256EB
  Pt12Y2003EU883825None   E11D, E13D, S17C, A23AV, V31VI, S39R, I72IV, L101I, K111T, T206S, D256E, Y271YFB
  Pt12Y2006EU883826None   D3E, E11D, E13D, S17C, A23AV, S39R, L101I, K111T, T206S, D256EB
 Pt17Pt17Y2000EU883838None   E10D, M50I, M178MR, V201I, T206S, D229DNB
  Pt17Y2004EU883839None   E10D, M50I, I84V, M154I, V201I, T206SB
 Pt22Pt22Y1998EU883854None   R20RK, V31VI, L101I, I113V, T206S, I208L, D256E, S283GB
  Pt22Y2000EU883855None   R20K, V31VI, L101I, I113V, T206S, I208IL, D256EB
 Pt36Pt36Y1995EU883895None   S17N, M50MI, I72V, L101I, T206S, D232E, D256E, A265V, S283SGB
  Pt36Y2005EU883896None   S17N, M50MI, I72V, L101I, T206S, D232E, D256E, A265VB
 Pt37Pt37Y1994EU883897None   E13EG, M22I, A23V, L28I, S39C, M50I, I72IV, T206SB
  Pt37Y2004EU883898None   M22I, A23V, L28I, S39C, M50I, I72IV, T206SB
Luk (2008)BA-04006CM-BA-040EU693240None  L68VE11D, K14R, V31I, M50L, I72IV, L101I, T112V, S119P, T122I, T124A, T125A, G134D, G163V, D167E, V201I, T206S, I208M, T218I, L234I, D256E, S283GB
Malet (2008)33_D0 None   R20K, A23V, I72V, T124A, I204V, T206SB
Miura (2008)BEC7BEC7EU517862None   S24SG, I72V, K111KT, M154L, V165I, T206SB
 BEC24BEC24EU517865None   S17N, I72V, T124N, V201I, T206S, A265VB
 BEC57BEC57EU517879None   E11D, S24G, D25E, S39C, L45Q, S119P, T122I, T125A, T206S, N254NK, S283NB
Yamaguchi (2008)J11233J11233EU697906None   K14R, S17N, L28I, S39C, L45V, M50I, I72IV, L101I, T112V, S119P, T124A, T125A, D167E, V201I, T206S, T218I, L234I, D256E, S283GB
 J11451J11451EU697908None   K14R, S39C, L101I, T112V, S119P, T122I, T124A, T125A, D167E, V201I, T206S, T218I, L234I, S283GB
Brumme (2009)INT_3450INT_3450FJ812901None   D6DE, E10EA, E11D, S17SN, V37VI, I72V, K111A, T112A, S119P, T125A, V201VI, T206S, I208ILB
 INT_3453INT_3453FJ812904None   E10D, V31I, M50MI, I113V, T124N, T125A, T206S, A265AVB
 INT_3461INT_3461FJ812912None   D6E, K7R, E11D, V32I, V37I, I72V, S119P, T122I, T125A, V201I, T206SB
 INT_3469INT_3469FJ812920None   S17N, I72V, I113V, T124A, T206S, D256EB
 INT_3476INT_3476FJ812927None   K7KR, I72V, S119ST, T124A, K156R, I204IV, T206S, I217IV, S230N, R284GB
 INT_3480INT_3480FJ812931None   E11D, S17C, I72V, L101I, S119P, T122I, T206SB
 INT_3481INT_3481FJ812932None   E11D, V32I, I72V, I84V, S119G, T122I, V201I, T206SB
 INT_3489INT_3489FJ812940None   I72IV, I113IV, T124A, T206S, K215NB
 INT_3499INT_3499FJ812950None   V31VI, E35EK, I72IV, L101LI, K136N, K173KR, F181L, T206SB
 INT_3505INT_3505FJ812956None   E11D, S24N, T206S, D232EB
 INT_3526INT_3526FJ812977None   E11D, V37I, I72V, L101I, S119SAGT, T122I, T124A, K156N, S195C, T206S, S283SGB
 INT_3560INT_3560FJ813011None   V31I, I72V, L101I, T122TI, T124A, G193E, T206S, A265AV, D278NB
 INT_3572INT_3572FJ813023None   D6E, E11D, S17C, A23AV, I72V, S119P, T122I, T124A, T206S, I208IL, K211KR, S283GB
 INT_3638INT_3638FJ813089None  V151IS17SN, V31I, S119ST, T124A, T125A, I135IV, T206S, Y227F, S230G, D256DEB
 INT_3639INT_3639FJ813090None  T97AE11ED, V31I, I72IV, L101I, K103R, K111T, S119T, T125A, V126T, D167DE, V201I, T206S, I208L, E212A, T218TS, S230N, D232EB
 INT_3662INT_3662FJ813113None   E11D, V32I, I72V, T124S, T125M, V126M, M154L, V201I, T206SB
 INT_3664INT_3664FJ813115None   K14R, S17C, M50I, I72V, I113V, T124A, T125A, T206SB
 INT_3670INT_3670FJ813121None   I72IV, T112I, I113MV, S119P, T124N, T125A, T206SB
 INT_3682INT_3682FJ813133None   D6E, E10A, E11D, S17N, A23AV, V31I, K111KT, S119PT, T124N, T125A, I203M, T206SB
 INT_3688INT_3688FJ813139None  T97TAD6E, S17N, M50I, S57SG, I72V, I113IV, T124N, T125A, E198Q, I204V, T206SB
 INT_3691INT_3691FJ813142None   D6E, S17N, V31I, V32VI, I72V, T124N, T125A, E198Q, I203M, I204IV, T206S, S230SN, S283SNB
 INT_3699INT_3699FJ813150None   K111T, I113IV, T124TA, T206S, Q274QRB
 INT_3701INT_3701FJ813152None   E11D, V31I, I84L, L101I, K156N, R187K, T206S, I208L, D256EB
 INT_3749INT_3749FJ813200None   D6E, K14KR, S17SN, V32I, I72IV, T124N, T125A, E198Q, I203M, I204V, T206S, S230SN, L234LVB
 INT_3783INT_3783FJ813234None   D6E, S17N, V32I, I72V, L101LI, T124N, T125A, E198Q, I203M, T206SB
 INT_3784INT_3784FJ813235None   S39C, L45Q, I72V, L101LI, S119ST, V201I, T206S, I208IM, T210TA, K211KQ, E212EAG, S230SNB
 INT_3794INT_3794FJ813245None   E11D, V31I, L101LV, K111T, S119P, T206S, D253EB
 INT_3795INT_3795FJ813246None   E11D, L28I, V37I, S39C, M50I, I113V, S119P, T125A, K173R, V201VI, T206S, K211RB
 INT_3799INT_3799FJ813250None   D6E, E10D, K14KR, V31VI, V32I, M50MI, L101I, T124N, T125A, E198Q, I204V, T206SB
 INT_3801INT_3801FJ813252None   S17N, L28I, S39SC, L45GIRV, I113IV, T124A, T206SB
 INT_3807INT_3807FJ813258None   E11D, K14KR, R20RK, S24SG, D25E, V31VI, V32VI, S39C, I72V, K111KR, S119P, G193E, V201I, T206S, I208IL, T210TI, K211R, E212EA, D279GS, S283SGB
 INT_3810INT_3810FJ813261None   E11D, S24N, V88I, L101I, T112TI, T122TI, T124TN, T125TAMV, V126VA, I200IL, V201VI, T206SB
 INT_3813INT_3813FJ813264None   E11D, S17C, V31I, V32VI, G59GE, K71KR, I72IV, V77VA, L101I, S119P, T122I, I182IV, K188R, T206S, K211KRB
 INT_3814INT_3814FJ813265None   K7KR, E11ED, V31I, L101I, K111T, S119P, T122IV, T206S, D279G, R284RGB
 INT_3817INT_3817FJ813268None   D25E, L28I, V31VI, I72V, S119G, T122I, T124TA, T125A, V201I, T206S, A265V, R269KB
 INT_3861INT_3861FJ813312None   K14R, V31VI, T112V, S123C, T124N, T125A, V126L, T206S, S230N, D232E, D256EB
 INT_3884INT_3884FJ813335None   S17N, I113V, T124TADN, T125TA, T206S, I208L, L234I, A265VB
 INT_3891INT_3891FJ813342None   S24N, D25E, K103R, T112A, S119P, T122I, T124A, T125A, T206S, I208IM, E212A, Q216H, T218S, K219N, D286DNB
 INT_3902INT_3902FJ813353None   A23AV, L28I, S39C, I72V, L101I, K111T, I113V, S119T, T206SB
 INT_3904INT_3904FJ813355None   L101LI, F181L, T206SB
 INT_3912INT_3912FJ813363None   E11D, S17C, I72V, L101I, S119P, T122I, T206SB
 INT_3934INT_3934FJ813385None  L68LVE11ED, S24N, I72IT, S119T, K136Q, H171HQ, V201I, T206SB
 INT_3936INT_3936FJ813387None   E11D, S24N, V31I, I72V, K111R, T112A, S119P, T122I, T125A, R187K, T206SB
 INT_3950INT_3950FJ813401None   E11D, S17C, A21S, V32I, I72V, L101I, S119P, T122I, T206SB
 INT_3953INT_3953FJ813404None   K14R, V32I, D41N, I72V, L101I, V201VI, T206S, I208L, V260VIB
 INT_3956INT_3956FJ813407None   S24SN, I72V, T206S, L234I, D253EB
 INT_3970INT_3970FJ813421None   K7KR, K14KR, L101I, K111T, S119P, T122I, T125TA, S195C, A205AS, T206S, D256EB
 INT_3971INT_3971FJ813422None   A21AT, V31I, L172LP, T206S, N222NH, S283GB
 INT_3976INT_3976FJ813427None   S17SN, I72V, T124A, T125TA, G193E, T206SB
 INT_3986INT_3986FJ813437None  T97AE11D, V31I, I72V, I84IM, L101I, K103R, K111T, S119T, T125A, V126T, V201I, T206S, I208L, E212A, T218S, S230N, D232EB
 INT_3987INT_3987FJ813438None   E11A, S39C, L45I, M50I, I72IV, L101I, K111T, T112A, T125A, E157Q, K160Q, V201I, T206SB
 INT_3988INT_3988FJ813439None   S17N, V31I, G59D, I72V, S119G, T122I, T125A, V201I, T206S, L234I, A265VB
 INT_3998INT_3998FJ813449None   E11D, S24N, M50MI, I72V, L101LI, I113IV, S119P, K156KR, V201VI, T206S, T218S, S283SGB
 INT_4017INT_4017FJ813468None   L101LIV, F181L, T206S, S283GB
 INT_4018INT_4018FJ813469None   E10D, E11D, A21AT, L45Q, K111R, S119G, T122I, T125A, T206S, K219N, N222K, L234IB
 INT_4029INT_4029FJ813480None   K7KR, V31I, K156N, T206S, I208ILB
 B8526B8526GQ371810None   M50I, S119SG, T122TI, I141V, T206S, R262RK, D270DNB
 B9543B9543GQ371813None   A23AV, K34R, T124TA, V201I, I203IM, T206SB
 D3579D3579GQ371820None   E11D, D25E, V31I, V32I, L101V, S119T, K188R, V201I, I203M, T206SB
 D4523D4523GQ371822None   K7Q, E11D, R20RK, V31I, I72V, L101I, I113V, T122I, T124A, T206S, I208M, D256E, A265VB
 D6512D6512GQ371826None   S17N, I72V, L101I, G163GE, T206S, S255SR, S283SNB
 D7533D7533GQ371830None   E11D, V31I, M50I, I72V, E96D, L101I, S119P, T122TI, K156N, E157Q, F181L, G193GE, V201I, T206S, I208IL, K211KQR, E212EA, S230N, D256E, I268ITB
 D8520D8520GQ371832None   D6E, E11D, A21T, A23V, T122I, V201I, T206S, K219Q, E287EGB
 E7538E7538GQ371856None   K7R, S17N, T124N, T125V, I135V, V201I, T206S, I208L, I220M, Q221GB
 F1531F1531GQ371863None   D6E, E11D, K14R, R20K, L28I, V31I, V32I, V37I, I72V, I113V, S119P, T122I, T124N, K156R, V201I, T206S, S283GB
 F2528F2528GQ371865None   K14R, V31I, I72V, A91S, Q95H, T112I, I113V, S119P, T125A, M154L, V201I, T206S, D256EB
 F5510F5510GQ371873None  L68VE11D, N27G, V31I, V32I, M50I, K111T, T124A, S195SR, V201I, T206S, K219KT, S230NB
 F8527F8527GQ371881None   S17N, S24D, V31I, I72V, I113V, T124A, T125A, I182V, T206S, R262RKB
 G0578G0578GQ371886None   V31I, L101I, K111Q, T124S, T125A, I135V, D167E, F181FL, V201I, T206S, I257IL, A265VB
 G2506G2506GQ371888None   S17N, I72V, L101I, K111T, T124N, T125A, I135V, D167E, S195SR, T206S, T218I, R262RKB
 G8521G8521GQ371903None   I72V, K111R, T112I, T125V, I141V, K160R, D167E, V201I, T206S, I220VB
 H1549H1549GQ371910None   S17N, A98AG, L101I, K111RS, S119ST, T124N, T125TA, T206S, D207E, S230N, D232E, D256EB
 H4570H4570GQ371919None   D6E, E11D, S17N, V31I, I72V, I113V, S119P, T122I, T125A, K156N, G163Q, T206S, R262RKB
 H7518H7518GQ371922None   E11D, K14R, S24N, S39C, I113V, S119P, T124N, T125A, I135IV, V201I, T206S, L234IB
 H8577H8577GQ371928None   S17N, I72V, T124N, G163G*, V201I, T206S, S230N, D232E, A265V, S283DB
 J0573J0573GQ371933None   V37I, G59E, L101I, T124N, F181L, V201I, T206S, D256E, R262RK, I268L, D270HB
 J9520J9520GQ371951None   D25E, K34R, I72V, F100S, L101I, T125A, M154I, V165I, K173KN, V201I, T206S, R262RK, D270EB
 L0505L0505GQ371976None   E10D, K14R, V31I, L101I, S119T, T124TA, K156N, I162IM, K173KN, V201I, T206S, I208L, K211R, E212A, D256E, R262RKB
 L2570L2570GQ371983None   L101I, T112AV, S119T, T206S, I208L, E212A, K215N, Q216HB
 L4548L4548GQ371989None   K7R, T124N, R187RK, T206S, I208IL, K219N, N222KB
 M5516M5516GQ372010None   I72V, K111T, T124A, I135IV, F181L, V201I, T206S, T218TI, I251IL, N254Q, S255GB
 N1505N1505GQ372027None   D6EK, S17N, V32I, I72V, L101I, I135IV, G193E, T206S, R262RK, A265AV, D278DN, D286NB
 N4510N4510GQ372033None   K7KR, S17N, V31I, L63I, I72V, L74I, L101I, K111T, S119T, T124A, I135V, K173R, V176L, T206S, D207E, D256EB
 N6522N6522GQ372039None   G70E, I72V, T124A, M154L, G193D, V201I, T206S, Q216H, Y226F, L234I, K266KR, I268L, D270HB
 O1570O1570GQ372054None   D6E, E10D, E11D, S17N, D25E, V31I, M50T, I72V, L101I, S119P, T122I, T124A, T125A, K160T, I161IL, T206SB
 O6577O6577GQ372067None   E11D, M22L, S24N, V37I, L101I, I113IV, S119P, T122TI, T125A, V176VI, T206SB
 P6518P6518GQ372090None   E10D, E11D, V32I, L101I, S119G, T122I, T206S, L234I, D256E, R262RK, R284G, D286NB
 Q3531Q3531GQ372106None   M50I, S57N, I72V, L101I, T112A, T125A, I135V, Y194C, V201I, T206S, I220L, Y227F, N254K, A265VB
 Q5528Q5528GQ372112None   E11D, S17C, L101I, T124N, T125A, R166RS, I182V, T206S, I208L, L234I, D256EB
 Q8509Q8509GQ372116None   E11D, S24N, D25E, L101I, S119P, T122TI, G193E, T206S, I208IL, S230N, D286NB
 R9506R9506GQ372142None   S17N, V31I, I72V, L101I, K111Q, T112A, T124A, T206S, D256E, S283GB
 S6524S6524GQ372161None   K14KR, S17N, I113V, T124A, T125A, T206S, T218TS, D253E, D256E, S283SGB
 S9533S9533GQ372169None   S17N, A23AV, K34R, L45LQ, M50I, I72V, T124A, K160L, V201I, T206S, L234LF, D253DH, D256DE, D270E, D279GB
 T0548T0548GQ372173None   E11D, A23V, K111Q, S119P, V201I, T206S, Q221T, S255GB
 V0570V0570GQ372200None   E11D, H16HP, Q53QE, I72V, S119P, T122I, T124N, T125A, M154L, G193R, V201I, T206SB
 V2503V2503GQ372202None   K14R, R20K, K34R, L101I, S119R, S123C, G193E, T206S, I208IM, D256E, D286NB
 V5578V5578GQ372210None   I72V, I84M, S119P, M154L, V201I, A205S, T206S, D207E, T218I, D256DEB
 W0533W0533GQ372220None  G163GRD6E, E11D, S24N, K34R, M50I, S119T, T124A, V201I, T206S, I220ILB
 W9500W9500GQ372241None   E11D, K14R, R20RK, T124A, F181X, G193E, T206S, D279GB
 X6579X6579GQ372262None   D6E, E11D, E13D, V37I, I72V, T112I, S119P, T122I, V201I, T206S, D256EB
 X7535X7535GQ372265None   D6DE, K14R, V32I, E96D, L101I, K103R, T124N, T125V, I135V, V150VI, G193R, T206S, I208L, S230NB
 Y1525Y1525GQ372275None   K7R, V31I, I72V, L101I, K111KR, T124TA, I135V, M154L, F181L, T206S, I220MB
 Y4539Y4539GQ372284None   M50I, L63I, I72V, T124N, G193GR, V201I, T206S, I208L, E212A, A265VB
 Z3571Z3571GQ372303None   S17N, I72V, A91E, L101I, S119R, T122I, T124A, A205S, T206S, T218S, Y227F, D256EB
 Z8538Z8538GQ372315None   I72V, A91G, L101I, S119P, T122I, T124A, K188R, T206S, K219KT, I220IL, N222NK, I267IVB
Canducci (2009)pt1pt1blEU908742None   S17N, S24N, I113V, S119T, T124A, T125A, V165I, T206S, Q216HB
 pt7pt7blEU908765None   S24A, L101I, T112TI, T125A, I135V, F181L, T206S, D229E, S230N, D256DEB
Delelis (2009)Pt3Pt3 None   I113V, T124NS, T125A, T206S, I220L, Y227FB
Eshleman (2009)BrRJ96-011BrRJ96-011FJ480328None   V31I, K111T, S119T, T125M, T206S, I220IMB
Garrido (2009)4INT-4GU216851None   E11D, M50I, S57N, I72IV, I113V, S119SPRT, V201I, T206S, I208L, Y227F, S255SN, D256E, A265VB
 5INT-5GU216852None   E11D, S24N, V31I, M50T, I72V, T125V, T206SB
 8INT-8GU216855None   L28I, P30A, I72V, T112I, T122TI, T124N, D167E, V201I, T206S, V260VLB
 24INT-24GU216871None   E11D, M50I, S57N, I113V, V201I, T206S, I208L, Y227F, D256E, A265VB
 57INT-57GU216904None   K7K*, S17N, V31VI, M50I, I72IV, I113V, S119R, T122IN, T124A, T125A, T206S, Y227F, L234V, D256E, A265V, D279DNB
 58INT-58GU216905None   E11D, S24N, V31I, M50T, I72V, T125V, T206SB
 62INT-62GU216909None  S147SRE11D, S24G, D25E, L28I, V31I, L45IV, I72IV, K156N, T206S, T218S, D279NB
 73INT-73GU216920None   L28I, P30A, K34KR, I72V, T112I, T124N, D167E, V201I, T206SB
 81INT-81GU216928None   E11D, K14R, S17T, S39C, M50I, T124A, T206S, D279DNB
 112INT-112GU216959None   K14KR, R20K, V31I, T112TI, T124A, V201I, I203M, T206S, S230N, D279DNB
 125INT-125GU216972None   S17N, I72V, I113V, S119P, T124N, T206S, I208L, K219N, N222K, S255G, D279DNB
 133INT-133GU216980None   E11D, S24G, S39C, I60V, I72V, L101I, K111R, I113V, S119P, T124A, I203M, T206S, I220F, Q221H, D279DNB
 165INT-165GU217012None   S57N, L101I, I113L, T124A, V201I, A205S, T206SB
 169INT-169GU217016None   L101I, I113L, T124A, G134S, V201I, A205S, T206SB
 213INT-213GU217060None   V31I, M50I, I72V, L101I, S119P, T122I, T124A, T206S, D207DE, D256EB
 215INT-215GU217062None   E11D, S24A, V31I, A91T, L101I, S119R, T125S, T206S, I208L, T210S, K211S, E212I, T218S, D232E, D256EB
 225INT-225GU217072None   E11D, A23V, L28M, V31I, V32I, S39N, T93S, L101I, T124N, V201I, T206S, S230NB
 228INT-228GU217075None   E11D, K14R, V31I, L45V, M50I, L101V, T125A, F181L, G193D, V201I, I204S, T206S, Y226YD, D256EB
 246INT-246GU217093None   E11D, R20K, I72V, L101I, T112TI, I161L, G193E, V201I, T206SB
 255INT-255GU217102None   S17N, V31I, I72V, K103KR, T112I, T124N, T125V, K156N, V201I, T206SB
 257INT-257GU217104None   K14R, S39C, I72IV, I113V, S119P, T124N, I203M, T206S, D207E, S230N, D256E, V260VIB
 260INT-260GU217107None   V31VI, I72V, T124NS, K156N, V201I, T206S, D256EB
 262INT-262GU217109None   E11D, S24N, I60V, I72V, T112I, I113V, S119P, T122TI, T124N, V201I, T206S, T218S, I220VB
 276INT-276GU217123None   S17N, M50I, Q62K, K111T, I113V, T124A, T125A, T206S, D256EB
 278INT-278GU217125None   S24A, L28I, I60L, L101I, I113V, S119P, I182V, T206S, K215N, D232EB
 289INT-289GU217136None   V31VI, V32IL, S39SC, L45V, M50I, I72V, A91T, L101I, T206S, K219N, N222KB
 293INT-293GU217140None   Q44K, I72V, T112TI, I113V, S119P, T122TI, E152G, T206S, T218SB
 298INT-298GU217145None   S17T, A23V, L28I, V37I, K71N, I72V, S119R, T125A, K156N, D167G, T206S, L234VB
 305INT-305GU217152None   V31I, I72V, L101I, K111T, T124A, T206S, L241LRB
 317INT-317GU217164None  L68IK7Q, E11D, P30S, I60V, I72V, I73V, L101I, S119T, T124A, V201I, I203M, T206S, I208L, D279G, S283GB
 318INT-318GU217165None   E11D, K14N, V32I, E96D, L101I, S119P, T206S, D232N, D256E, A265VB
 324INT-324GU217171None  L68IG4E, K7Q, E11D, A23T, V32I, I72V, I73V, L101I, I113V, S119P, T122TI, V201I, T206S, I208L, T218I, S230G, D279G, S283GB
 327INT-327GU217174None   I5L, E10D, E11D, A23V, I72V, S119P, T122I, T124A, K127R, V201I, T206S, A265VB
 328INT-328GU217175None   E10D, E11D, A23V, I72V, S119P, T122I, T124A, V201I, T206S, A265VB
 333INT-333GU217180None   K14KR, S39C, I72V, L101V, K111T, T124A, T125A, V126L, V201I, T206S, D207E, S283GB
 337INT-337GU217184None   V31I, M50I, T206S, D232E, A265VB
 338INT-338GU217185None   S17N, S24N, L28I, T112A, T124S, T206S, A265VB
 345INT-345GU217192None   V31I, L101I, S123G, T124A, G163A, I200M, T206S, I208L, I217ITB
 346INT-346GU217193None  V54IE11D, R20K, V31I, L101I, K111T, T122I, T124N, T206SB
 347INT-347GU217194None   L104I, K111Q, S119T, T206S, D256EB
 355INT-355GU217202None   E11D, A21T, A23V, I113V, S119G, T124N, T125A, T206S, D279GB
 384INT-384GU217231None   E11D, H12T, S17N, R20K, V31I, I72V, L101I, K111T, T124A, A133T, I182V, V201I, T206S, Y227F, D253Y, D256E, A265AV, S283GB
 386INT-386GU217233None   E11D, S17T, R20RK, A23V, T112I, V201I, T206S, T218SB
 389INT-389GU217236None   E11D, V31VI, G70E, L101I, S119R, T206SB
 407INT-407GU217254None  V151I, R263RKE11D, S24N, D25E, V31I, I72V, I113V, S119P, T206SB
Kousiappa (2009)CY018CY018FJ388890None   E11D, S17T, A23V, L101I, S119P, I135V, F181L, T206S, Y227F, L234I, D256E, V260IB
 CY037CY037FJ388899None   E11D, S24A, I72V, S119P, M154L, T206S, T218SB
 CY055CY055FJ388904None   N18S, A23V, T112I, I113V, S119P, T124N, T125A, G134R, T206S, R224Q, D232E, R269KB
 CY067CY067FJ388911None  V151IE11D, S24N, I72V, K186E, T206S, S283GB
 CY074CY074FJ388915None   E11H, K14R, S24N, P30S, V31I, I72V, T125A, V126L, I135V, S195H, T206S, T218S, N222Q, I268LB
 CY075CY075FJ388916None   K14R, V88I, T112I, I113V, S119P, T124N, T125A, T206S, D232EB
 CY130CY130FJ388934None   E10D, M50I, I72V, L101I, K111Q, S119G, T122I, T124A, T125A, T206S, Q216H, L234IB
 CY141CY141FJ388939None   E10D, M50I, I72V, L101I, K111Q, S119G, T122I, T124A, T125A, T206S, Q216H, L234IB
 CY100CY100FJ388964None   E11D, V37I, I72V, L101I, T112I, I113V, T122I, T124A, T125A, T206S, N222HB
 CY038CY038FJ388900None   E11D, S24A, V31I, I72V, M154L, V201I, T206S, T218S, I220LB
Low (2009)ahi7ahi7_99FJ786274None   E11D, A21T, A23V, D25E, L101I, S119G, T122I, T125A, G193E, T206S, L234V, D256E, D279GB
 ahi8ahi8_06FJ786275None   R20K, S119T, K156N, T206S, I208L, E212AB
 ahi9ahi9_02FJ786276None   K14R, L28I, P30A, S39C, I72V, T124A, I203M, T206S, I208L, S283GB
 ahi13ahi13_05FJ786280None   S17N, I72V, F100Y, L101I, T124N, I141T, V150A, V201I, T206S, I208L, D256E, S283GB
 ahi14ahi14_06FJ786281None   E11D, I60M, I113V, T124A, V126F, V165I, T206SB
 ahi26ahi26_05FJ786293None   E11D, S24N, P30S, T112I, V201I, T206SB
 ahi33ahi33_06FJ786300None   E11D, D25E, V31I, L101I, V201I, T206S, K215N, D256E, I268L, R284G, D286NB
 F-15F-15FJ786302None   I72V, T124N, T125A, V126L, M154L, V201I, T206S, C280SB
 ahi45ahi45_02FJ786312None   E11D, V31I, M50I, L101I, G163E, F181L, V201I, A205S, T206S, T218S, S230NB
 ahi48ahi48_01FJ786315None   E10D, V31I, M50V, I72V, V79A, L101I, T122I, T124A, V201I, T206S, I208L, T218S, I220L, Y227F, L234IB
 ahi52ahi52_98FJ786319None   E10G, K14R, V32I, E96D, L101I, K103R, T124N, T125A, I135V, G193R, T206S, I208L, S230NB
 ahi53ahi53_07FJ786320None   V31I, I72V, K111T, I113V, T124A, T206SB
 ahi58ahi58_01FJ786325None   D6K, E10D, D25N, M50I, I72V, L101I, S123C, K156N, T206SB
 ahi64ahi64_98FJ786331None   S17N, N27D, L45V, L101I, K136N, T206S, I208L, E212A, D256EB
 ahi70ahi70_01FJ786337None   E11D, V31I, M50I, L101I, G163E, F181L, V201I, A205S, T206S, T218S, S230NB
 ahi72ahi72_96FJ786339None   K7R, S17N, I72V, K111T, I113V, T124A, T125A, T206SB
 ahi73ahi73_01FJ786340None   E11D, S24N, V31I, M50T, A91T, T206S, S230N, D232E, K273Q, D278N, S283GB
 ahi85ahi85_03FJ786353None   S17N, I72V, L101I, T124A, K156N, V165I, V201I, I203V, T206S, D207E, I208L, D256EB
 ahi91ahi91_03FJ786359None   E11D, S24N, K156N, V201I, T206S, T218SB
 ahi92ahi92_03FJ786360None   E11D, S24N, S119T, V201I, T206S, I217V, T218S, D256E, S283G, R284GB
 K-2K-2FJ786378None   R20K, I72V, I113V, K188R, G193E, V201I, T206S, D278GB
 mdr2mdr2FJ786385None   S17N, S24A, L101I, T112I, T124N, T206S, D253E, D256EB
 mdr6mdr6FJ786389None  V151IS17N, A23V, L28I, P30A, I72V, L101I, S119T, T124A, T125A, F181L, V201I, T206SB
 mdr8amdr8aFJ786393None   S24N, L101I, V165I, V201I, T206S, K215QB
 mdr8bmdr8bFJ786394None   S24N, L101I, V165I, V201I, T206S, K215QB
Nadai (2009)147691147691EU839599None   K14R, S24N, D25E, I72V, T112R, S119P, T124A, K136Q, T206S, K215R, Q216K, K219N, N222K, S230N, D253E, N254GB
Passaes (2009)BR.RJ.FT46BR.RJ.FT46HM026767None   K7R, E11D, V31I, I72V, L101V, M154L, T206SB
 BR.RJ.FT14BR.RJ.FT14HM026775None  E138DD6N, E13D, V32I, K42R, L101I, T124N, T206S, D229E, R284GB
 BR.RJ.FT54BR.RJ.FT54HM026780None   E11D, R20K, L45Q, I72V, I113V, V201I, T206S, D256E, M275MVB
 BR.RJ.FT56BR.RJ.FT56HM026781None  V151IE11D, S24N, V31I, I72V, V201I, T206S, T218I, D256EB
 BR.RJ.FT59BR.RJ.FT59HM026782None   K7R, K14R, V31I, I72V, L101I, K111Q, T112V, T124A, T125A, G163Q, D167E, V201I, A205S, T206S, D207E, T218SB
 BR.RJ.SB97BR.RJ.SB97HM026787None   V32I, S39C, I72V, V201I, T206S, K219N, N222K, S283G, R284IB
Sichtig (2009)13-E13-EFJ183518None   K111Q, T112I, T124N, T125V, T206S, D256EB
 31-E31-EFJ183528None   K14R, V31I, I72IV, I73IV, L101I, T124A, K156KR, V176VL, G193E, T206SB
 Pt073690FJ183629None   E11ED, K14R, A21T, A23V, V88I, I113V, S119P, T124N, T125A, T206SB
 49744974FJ183645None   P30A, I72V, S119P, I200M, V201I, T206SB
 49954995FJ183651None   S17N, V32I, L45V, I113V, T124N, T125A, T206S, T218S, I220V, S255SNB
 51085108FJ183658None   S17N, V31I, I72V, S119P, T124A, G193E, T206S, D256EB
 47734773FJ183662None   M50I, T124TA, T206S, R231RK, L234G, N254QB
van Hal (2009)W1W1FJ554674None   E11D, V31I, T124N, T125V, T206S, Q285PB
 W2W2FJ554675None   S24D, V31I, S57C, G70E, I72V, L101I, S119R, T125V, V176L, G193E, V201I, T206S, K215N, S230N, S283GB
 W9W9FJ554682None   S17N, S39C, K71Q, L101I, T112I, S119R, T122V, T124N, T125A, T206S, L234V, I268LB
 W10W10FJ554683None   K14R, V32I, L45I, M50I, V201I, T206S, D256EB
 W11W11FJ554684None   E11D, V31I, M50L, I72V, L101I, I204V, T206S, A265VB
 W16W16FJ554689None   E11D, E13D, L101I, K111T, I113V, T122I, T124A, V201I, T206S, D232E, D253H, D256E, D279G, S283GB
 W22W22FJ554695None   E11D, S24N, V32I, S39C, M50L, L101I, S119G, T124N, I135V, K136N, V201I, A205S, T206S, D253E, N254KB
 W23W23FJ554696None   E11D, A23V, L45Q, K188R, V201I, T206S, D232E, A265VB
 W36W36FJ554709None   K7Q, D55G, A91T, T124A, T206S, I208L, K215N, I217V, R231K, D232NB
 W52W52FJ554725None   S17N, S39C, K71Q, L101I, T112I, S119R, T122V, T124N, T125A, T206S, L234VB
 W54W54FJ554727None   E11D, S24N, V31I, L45I, L101I, T112I, I113L, T122I, T124N, V201I, T206SB
 W56W56FJ554729None   K14R, V32I, L45I, M50I, V201I, T206SB
 W57W57FJ554730None   E11D, V31I, M50L, I72V, L101I, I204V, T206SB
 W64W64FJ554737None   E11D, E13D, L74I, L101I, K111T, I113V, T122I, T124A, V201I, T206S, D232E, D253H, D256E, D279G, Q285PB
 W70W70FJ554743None   E11D, S24N, V32I, S39C, M50L, L101I, S119G, T124N, I135V, K136N, V201I, A205S, T206S, N254KB
 W71W71FJ554744None   K14R, R20K, S39C, I113V, K173R, V201I, T206SB
 W72W72FJ554745None   E11D, A23T, L45Q, K188R, V201I, T206S, D232E, A265VB
 W97W97FJ554770None   V31I, T206SB
 W98W98FJ554771None  T97AV31I, T124A, T206SB
 W99W99FJ554772None   E11D, I72V, T206S, A265VB
 W123W123FJ554796None   K7Q, D55G, A91S, T124A, T206S, I208L, K215N, I217V, R231K, D232NB
Wang (2009)012286G012286GFJ469683None   A49P, I72V, I113V, T124A, T206S, L234IB
 CR0023WCR0023WFJ469688None   D3E, D55N, T124N, G163N, V201I, T206S, K211R, K219Q, I220L, I251VB
 CR0027MCR0027MFJ469689None   L28I, P30A, S39C, L101I, S119T, K188R, V201I, T206S, Y227F, L234V, A265VB
 CR0050ZCR0050ZFJ469692None   E11D, K14R, S24N, I72V, P90S, S119P, T122I, T125A, V126M, V201I, T206S, D256EB
 CR0058SCR0058SFJ469693None   E11D, S24N, M50I, I72V, I84V, V201I, T206S, I208L, D256EB
 CR0215CR0215FJ469708None   D25E, I113V, T125A, T206S, T210I, S230N, R231KB
 CR0234CR0234FJ469711None   L28I, P30T, S39C, I72V, I84M, L101I, T125A, I200M, V201I, I203M, T206S, I208LB
 CR0275CR0275FJ469713None   K7R, V31I, L101I, K111T, T206S, D232EB
 CR0289ZCR0289ZFJ469715None   S17N, A23V, L28I, S39C, I72V, I113V, T124A, E152K, F181L, G190E, V201I, T206S, Q216HB
 CR0295SCR0295SFJ469716None   E11D, V31I, T206S, S283GB
 CR0317NCR0317NFJ469719None   G106A, T112V, I113V, T124A, T206S, D207E, I208L, I217S, N254Q, S255GB
 CR0339XCR0339XFJ469721None   I72V, L101I, I182V, G193E, V201I, T206S, T218S, D286NB
 F701F701FJ469727None   E11D, M50I, I60V, I113V, S119T, T206S, I208L, D232E, D256EB
 F710F710FJ469729None   E10D, M50I, I72V, S119P, T124N, T125A, V126L, G163Q, T206S, I208L, L234I, D253E, D256EB
 F719F719FJ469734None   K14R, S24G, D25E, L28I, S39C, I72V, L101I, T124N, K173R, I182V, T206SB
 L8124PL8124PFJ469741None   I72V, L101I, T112I, S119P, T122I, T124N, T125A, M154L, D167E, V201I, T206S, I208M, D256EB
 L8152L8152FJ469742None   E11D, L101I, K111N, S119T, V201I, T206S, D256E, M275VB
 NCQNCQFJ469752None   V31I, L101I, A133T, V201I, T206S, I217V, A265V, R269K, S283GB
 PRLS02PRLS02FJ469754None   K14R, S24G, D25E, L28I, S39C, I72V, L101I, T124N, K173R, I182V, T206SB
 PRLS25PRLS25FJ469765None   E11D, M50I, I60V, I113V, S119T, T206S, I208L, T210A, D232E, D256EB
 SH8127SH8127FJ469767None   I72V, I113V, S119P, T124A, V201I, T206S, K211R, E212L, K215N, S230N, M275V, S283GB
Wittkop (2009)55_J0GU358391None  V151VIE11D, E13D, V31I, M50I, S57G, S119P, T122I, T124A, T206S, S255N, D256E, S283GB
 1010_J0GU358404None   E11D, E13D, S57N, L101I, K111T, T122I, T124A, I200M, V201I, T206S, V259IB
Arruda (2010)EI003EI003GQ864163None   S17N, L28I, P30A, L45S, I72V, K111R, K160T, V201I, T206S, K211R, M275VB
 EI006EI006GQ864166None   E10D, L101I, T112V, S119P, V201I, T206S, I208L, N254KB
 EI010EI010GQ864167None   D25E, S119P, T206S, I208L, A282X, S283NB
 EI020EI020GQ864175None   D6E, K7R, P30S, V31I, L101I, T206SB
 EI043EI043GQ864188None   V31I, M50I, I72V, I113V, T124A, F181L, V201I, T206S, D256E, A265V, R284G, D286NB
 EI051EI051GQ864196None  V151IE11D, V31I, I72V, T124A, T206S, K215Q, D256EB
 EI077EI077GQ864218None  V151IE11D, V31I, I72V, L74I, S119P, T122I, V201I, T206S, K219Q, R224Q, D256E, R269K, S283GB
 EI082EI082GQ864222None  V151IE11D, S24N, V31I, K34R, M50I, I89M, A91T, L101I, D167E, V201I, T206S, S283GB
 EI083EI083GQ864223None   R20K, I72V, T124A, T125A, T206S, T218I, L234I, R269RTB
 EI084EI084GQ864224None   E11D, K14R, S17T, I72V, T124A, V165I, T206S, L234V, D256E, S283GB
 EI086EI086GQ864226None   V31I, L45Q, I113V, T124N, T125A, T206S, S230N, A265VB
Rangel (2010)N421pN421pGU797487None   S39C, L101I, S119G, T122I, T125A, I135V, V201I, T206S, T218S, K219N, D232EB
 N477pN477pGU797498None   L28I, P30A, I72V, L101I, T112A, S119T, T125A, M154I, T206S, K215N, N222KB
 HIV187bHIV187bGU797503None   L172LF, T206SB
 HIV190bHIV190bGU797504None  V151IP90PS, I113V, T124N, T125M, V201I, T206S, I208L, D256EB
 HIV196bHIV196bGU797509None  G163RV31I, V32I, V37I, S39C, M50I, I72V, T125A, T206S, D232E, D253EB
 HIV202bHIV202bGU797510None   I72V, I113V, T124N, M154L, V201I, T206S, S230SN, D256EB
 HIV205bHIV205bGU797511None   V31I, M50I, I141V, V201I, I204IL, T206S, D232E, A265V, S283GB
 HIV209bHIV209bGU797513None   A23V, L28I, V31I, V32I, V37I, S39C, I72V, S119P, T122I, T125A, L172LF, V201I, T206S, K215N, D256E, S283G, R284KB
 HIV211bHIV211bGU797514None   I72V, V75M, P90PS, T206S, I208IL, E212EQ, K215N, Q221S, N222KB
 HIV242pHIV242pGU797524None   L28I, P30A, S39C, I72T, L101I, K111T, K156N, V201I, T206S, I208L, K211R, E212I, Q221T, L234V, N254KB
 HIV249pHIV249pGU797528None   I72V, A91S, L101I, S119P, M154L, V201I, T206S, T210TI, K211KR, D256EB
 HIV264bHIV264bGU797536None  E138DL28I, V31I, S39C, L101I, V201I, T206S, K215N, D229EB
 HIV264pHIV264pGU797537None  E138DL28I, V31I, S39C, L101I, V201I, T206S, K215N, D229EB
 HIV269bHIV269bGU797542None   V31I, S39C, D55G, L101I, T112I, I113L, T124N, T125A, V126A, V201I, T206S, K240R, R284GB
Blanco (2011)CA1556CA124203 None   K7R, S17N, L101I, K111Q, T206S, D256EB
Brenner (2011)108PHI108PHIHQ207717None   E11D, S17C, N27G, P30A, V32I, S39R, I72V, L101I, T122I, T125P, K136N, T206S, I208LB
 118PHI118PHIHQ207719None   E11D, S17C, I72V, T112I, I113V, T124A, T206S, L234IB
 59715971HQ207729None   E11D, V32I, S119P, T122I, K136N, S195T, V201I, T206S, V259I, R284G, D286NB
 78227822HQ207764None   S17N, R20K, V31I, L45I, M50I, S119P, T124A, T125TA, K156N, V201VI, T206S, K219N, N222K, S230N, D256EB
 79127912HQ207765None   Y194C, V201I, T206S, K211R, I268L, D270HB
 83848384HQ207776None   Y194C, V201I, T206S, K211R, I268L, D270HB
 85568556HQ207780None   E11D, K14R, S24N, G106A, I113V, V201I, T206S, D256E, S283G, R284GB
 92819281HQ207791None   E11D, S24SN, V37I, G106A, T112TI, I113V, T124TN, T125A, V201I, T206S, D256E, S283G, R284GB
 INT2INT2HQ207820None   E10D, S17N, S39SN, G59GE, I72IV, L101I, T112A, T124A, T125A, V165VI, T206S, S283GB
 INT5INT5HQ207826None   A21T, L45G, T124N, I182V, T206S, I208L, T218IB
 INT6INT6HQ207827None   S17N, M50I, L101I, T112I, T124N, G163E, A169S, V201I, T206S, I220L, Q221S, D279GB
Canducci (2011)Pt3Pt3blJN163886None   S17N, S24N, I113V, S119T, T124A, T125A, V165I, V201I, T206S, E212K, Q216HB
 Pt6Pt6BLJN163893None   S17N, V31I, L101I, T112I, S119P, T122I, T124N, T206S, T218S, Y227F, D256EB
Graf (2011)SC35SC35JF773839None  V151ID6T, K7A, E10D, M50I, I72V, L101I, S119T, T125A, I135V, T206S, A265VB
 SC46SC46JF773847None   D6N, K7E, E10A, K14R, E48D, I72V, F100Y, L101I, S119P, T125A, I135V, T206S, K240R, N254K, S255GB
 SC65SC65JF773857None   K7R, E11D, S17T, K111R, S119P, T124S, T125A, K156N, T206S, K211A, E212QB
 SC113SC113JF773880None  V151ID6T, K7A, S17N, D25E, I72V, F100Y, L101I, S119T, T125A, I135V, V201I, T206S, A265VB
Kim (2011)p38p38HM051454None   V31I, I113V, T124N, T125A, K136N, T206S, K215NB
Rolland (2011)0227consensus_0227JF320036None   I72V, L74I, T124TA, V201I, T206S, I208L, K211KR, E212A, K215NB
 0839consensus_0839JF320063None   N27NS, I72V, L101I, T112I, T124A, I135V, V201I, T206SB
 0346consensus_0346JF320083None   E11D, S24N, V31I, L101I, S119T, I135V, T206SB
 1211consensus_1211JF320144None   E11D, S17N, L63M, I72V, S123C, T124A, T125A, T206S, S230NB
 1478consensus_1478JF320150None   E11D, V31I, K111T, I113V, T206SB
 0648consensus_0648JF320186None   D6E, K14R, P30S, V31I, V77A, L101I, V201I, T206SB
 2622consensus_2622JF320189None   S17N, I72V, V79A, L101I, T124A, V201I, T206SB
Sanabani (2011)BR1064BR1064JN692433None   S17N, S39N, I72V, L74I, T125A, I135V, V201I, I203M, T206S, I208L, T218I, D256E, S283GB
 BR2032BR2032JN692439None   E11D, E13D, K14R, L28I, T124A, T206S, I208L, S230N, V249I, D256E, S283GB
 BR2041BR2041JN692443None  V151IE11D, S17T, V31I, D41A, I72V, L101I, T206S, K215Q, K219R, D256EB
 BR2019BR2019JN692448None   E11D, K14R, S119P, T122I, T125A, S195T, T206S, V281MB
 BR1047BR1047JN692450None  V151ID6S, K7E, I72V, T125A, I135V, F181L, V201I, A205S, T206S, I268LB
 BR1051BR1051JN692452None   I113V, T124N, T125A, V201I, T206S, I220FB
 BR1068BR1068JN692457None   D6N, K7E, L28I, P30A, K188R, T206S, L234IB
 BR1070BR1070JN692458None  V151IE11D, I72V, L101I, K103R, S119G, T122I, T124A, T125A, T206S, K215Q, T218I, L234V, D256EB
 BR1079BR1079JN692462None   S17N, L28I, I72V, T124A, M154I, T206S, Y227F, L234H, D256E, R284GB
 BR1080BR1080JN692463None   E10D, M50I, T124N, T125A, T206S, I208L, R231K, D253E, N254D, S255R, S283GB
 BR1101BR1101JN692473None   D6N, K7R, S17N, P30S, V31I, T125A, K136Q, V201I, T206S, T218SB
Wilantho A (2011)500191500191JF928832None  V151IK7KR, K14R, V31I, K111Q, I113V, T124S, T125A, T206SB
Armenia (2012)PT_229PT_229_BLJN544120None   K7R, S17N, L101I, S119P, T122IV, K156N, V165I, V201I, T206S, T218S, K219N, D256E, D278AB
Brockman (2012)AEHIV8AEHIV8JQ080092None   V31I, I60M, I72V, V79A, S119P, V201I, T206S, K219N, D288NB
 AEHIV29AEHIV29JQ080113None   K7R, V31I, L101I, G163E, T206S, D232EB
 AEHIV32AEHIV32JQ080116None   E11D, S17T, M22I, A23V, V31I, V37I, M50I, L101I, G163E, D167E, V201I, T206SB
 AEHIV35AEHIV35JQ080119None   T206S, D207EB
 AEHIV36AEHIV36JQ080120None   T112V, I135V, F181L, V201I, T206S, D256E, I268L, D270H, R284GB
 AEHIV37AEHIV37JQ080121None   S17N, I72V, T112I, I113V, T124A, T125A, T206SB
 AEHIV49AEHIV49JQ080133None   E11D, S17C, I72V, L101I, S119P, T122I, T206SB
 AEHIV50AEHIV50JQ080134None   E11D, A21T, S119P, T124N, V176L, T206SB
 AEHIV63AEHIV63JQ080147None   E11D, S24N, I72V, T122I, T124N, T206S, I208LB
 AEHIV88AEHIV88JQ080172None   S39M, I72V, S119P, T122I, K156N, V201I, T206S, K219N, L234IB
Garrido (2012)BAA295924BAA295924JQ716907None   R20K, I72V, L101I, I113L, T124N, T125V, I204V, T206SB
 BAA295937BAA295937JQ716912None  T97AE11D, S24G, D25E, L45V, M50I, L101I, T125A, F181L, T206S, D256E, S283G, D288NB
 BAA295944BAA295944JQ716916None   Q44K, I72V, T112TI, I113V, S119P, T122TI, E152G, T206S, T218SB
Iamarino (2012)BF.BR.0708BF.BR.0708JN234041None   E11D, L28I, V31I, V32I, V37I, I72V, L101I, T112A, I135V, G193R, V201I, T206S, L234I, A265V, S283GB
 BF.BR.0639BF.BR.0639JN234046None   S17N, S39C, I72V, S119P, T122I, T125A, V201I, T206S, Q216H, K219N, D278NB
 BF.BR.0658BF.BR.0658JN234047None   T206S, K215N, Q216N, D256EB
 BF.BR.0709BF.BR.0709JN234050None  E138DS17N, K34R, M50L, I72V, L101I, K111Q, S119G, T124N, T206S, D207E, Y227F, D232E, D253Y, D256E, A265V, V281A, R284T, Q285PB
 BF.BR.1027BF.BR.1027JN234054None   S17N, A21S, A23V, D25E, V31I, E69K, G70E, I113V, T124A, T125A, M154I, E157K, D167E, T206S, D253EB
 BF.BR.1038BF.BR.1038JN234056None  V151IS17N, A21S, A23V, V31I, L101I, T112I, M154I, V201I, T206SB
 BF.BR.1074BF.BR.1074JN234059None   D6S, K7E, K14R, V32I, S39C, I72V, H183Y, T206S, L234IB
 BF.BR.1415BF.BR.1415JN234061None   D6N, K7E, Q9P, V31I, L45P, I72V, I113V, T125A, T206S, T218S, L234IB
 BF.BR.1438BF.BR.1438JN234063None  V151ID6T, K7E, V31I, I36L, I72V, L101I, I113V, S119T, V201I, T206S, I208L, T218I, L234IB
 B.BR.0475B.BR.0475JN234084None   E11D, S24A, T125A, I135V, F181L, V201I, T206S, I220FB
 B.BR.0484B.BR.0484JN234086None   D6S, K7E, R20K, L28I, P30A, I72V, V201I, T206S, L234IB
 B.BR.0514B.BR.0514JN234092None   A21S, V31I, K34R, I72V, L101I, T206S, A265V, S283GB
 B.BR.0523B.BR.0523JN234094None   L101I, K156N, V201I, T206S, E212V, K219T, I220L, A265VB
 B.BR.0535B.BR.0535JN234095None  V151IV31I, T125A, V126L, K127R, T206SB
 B.BR.0633B.BR.0633JN234099None  V151II72V, I113V, S119T, T124N, T125A, T206S, K211R, E212I, T218I, L234I, D256EB
 B.BR.1006B.BR.1006JN234112None   D6T, K7E, K14R, V31I, V32I, I72V, T206S, T218I, L234I, D256EB
 B.BR.1046B.BR.1046JN234122None   D6N, K7E, E11D, S24N, M50I, T124A, T206S, I217V, T218S, K219Q, I220L, N222K, L234I, S283NB
 B.BR.1059B.BR.1059JN234123None   D6S, K7E, E13D, S119P, T122I, T125A, K156N, T206S, L234I, D278N, S283GB
 B.BR.1361B.BR.1361JN234140None   D6N, K7E, V31I, I72V, K156N, T206S, N222H, L234I, D279GB
 B.BR.1388B.BR.1388JN234145None   S39C, M50I, L101I, T206S, I208L, A265V, R269KB
 B.BR.1416B.BR.1416JN234146None   D6N, K7E, E11D, L28I, V31I, V32I, G59R, I72V, V176E, T206S, L234I, A265VB
 B.BR.1481B.BR.1481JN234151None   D6S, K7E, K14R, V32I, V201I, T206S, L234IB
 B.BR.1497B.BR.1497JN234156None  V151IE11D, I72V, V88I, I113V, S119P, S195T, T206S, D207E, L234I, D256EB
 B.BR.1500B.BR.1500JN234158None   D6T, E10D, E13D, V32I, I72V, I113V, T124N, T125A, I204V, T206S, I208LB
 B.BR.1540B.BR.1540JN234168None   D6S, K7E, D25E, S119P, T122I, T125A, K156N, T206S, L234I, D278NB
 B.BR.1542B.BR.1542JN234169None   D6T, K7Q, E11D, K14R, S17N, L28I, L45V, T124N, T125A, I135V, G163E, T206S, S230N, N254Q, S255G, K273NB
 B.BR.0452B.BR.0452JN234170None   A21S, A23V, S24G, L101I, T206SB
 B.BR.1044B.BR.1044JN234176None   G4E, S17N, A21S, A23V, D25E, V31I, L101I, I113V, T124A, T125A, D167E, T206S, D253EB
Parczewski (2012)103103_38KC409134None   E11D, R20K, G70D, L101I, S119R, T124N, G193E, S195T, T206S, D270NB
 110_45110_45KC409142None   E11D, S57SN, I60IM, G70E, L101I, S119R, T124N, G193E, S195T, T206S, D279GB
 409_6409_6KC409159None   E11D, S24N, D25DE, V31I, I60L, G70N, L101I, T112TI, I113V, T124N, T206S, K211R, A265VB
 514_15514_15KC409167None   P30A, I72V, K160KN, V201I, T206SB
 919_1919_1KC409215None   K14R, G70E, L101I, T112V, S119R, T124N, K160Q, R187K, V201I, T206S, S230N, D256E, S283GB
Zeng (2012)CN0672CN0672JQ028311None   D3E, E11D, L45Q, I72V, K111T, T206S, D286NB
Kijak (2013)05TH35780105TH357801JN248346None   S17N, L101I, T124A, T125A, I135V, K136N, I162V, T206S, D256E, D279G, R284GB
Li (2013)28382838JQ901049None   S17N, I72V, P90S, L101I, T124A, K156N, D167E, V201I, T206S, D256EB
Li (2013)hnwsx46hnwsx46KC988147None   V88I, A91T, L101I, K111R, S119T, T124N, T125A, K156N, G193K, T206S, K211RB
Reigadas (2013)55JX425473None  E138DE11D, M50I, I60V, I72V, K111T, S119G, T122I, V126M, T206S, I208MB
 77JX425475None   K7R, E11D, A21T, I72V, L101I, T124A, T125A, I135IV, P142PS, A205T, T206SB
 1010JX425478None   K14R, S39C, L45Q, M50I, I72V, I113V, T124A, T206SB
 1111JX425479None   D6E, E11D, E13D, L28I, V37I, S39C, S57N, I60M, S119P, T122I, T124A, V201I, T206S, V281VMB
 1313JX425481None   K14R, S17N, S24D, D25E, L28I, P30A, S39C, M50I, P58PS, I72V, I113V, T124S, T125A, V201I, T206S, S230N, V249IB
 2020JX425488None   E11D, D25E, V31I, S39C, M50I, L101I, V201I, T206S, K215N, L234IB
 2727JX425495None   D6E, E10D, E11D, S24N, V32I, S39C, L45I, M50I, L101I, K156N, T206SB
 3333JX425501None   D25E, V31I, I113V, T124N, K188R, A196P, T206S, D256E, S283GB
 3838JX425506None   E11D, T112V, V201I, T206S, E212A, K219Q, S283GB
 4040JX425508None   E10D, V31I, M50I, I72V, S119P, T122I, T124A, T206S, A265VB
 4242JX425510None   E10D, I72V, S119G, T122I, T124A, T125A, V201I, T206SB
 5656JX425524None   E11D, P30Q, V31I, D41S, S119P, T122I, T125A, K156N, V201I, T206S, M275VB
 6868JX425536None   S17N, L101I, S123C, T124N, F181L, T206S, D256EB
 6969JX425537None   S17N, V31I, I84M, K111R, I113V, T124N, T125A, T206S, A265VB
 7070JX425538None   L101I, K111T, T124A, T125A, T206SB
 7373JX425541None   E11D, S24N, I72V, T112I, I113V, S119P, T124A, T206S, D256EB
 8080JX425548None   K7R, I72V, L101I, T124S, T125A, I135V, G193D, T206S, I217V, A265V, R269K, D270HB
 9898JX425566None   K14R, S17N, A23V, L28I, P30A, E35EK, S39C, I72V, L74I, K103KR, I113V, T124A, V201I, T206S, S230N, I251LB
 119119JX425587None   M50I, I72V, S119P, T124A, H171H_N, F181L, T206S, T210TS, I220M, Y227F, A265VB
 122122JX425590None   L101I, K111N, V201I, T206SB
 128128JX425596None  P145PLV31VI, E85EK, L101I, G106GE, K111N, T124N, V201I, T206S, T210A, T218IB
 134134JX425602None   I5K, E11D, S17T, A23V, G59E, L101I, S119P, V201I, T206SB
 139139JX425607None   D6E, E11D, E13D, S24N, V31I, S57G, S119P, T122I, T124A, H171L, V201I, T206S, K219Q, D256EB
 142142JX425610None   E11D, D25E, V31I, T124A, G193E, T206S, D286NB
 156156JX425623None  L68IVE11D, R20K, S39C, T112TI, T206S, D232EB
 180180JX425647None   V31I, L101I, T124A, T206S, T218I, A265VB
 183183JX425650None   E11D, K14R, V31I, S195T, T206S, Q209P, S230N, D232EB
 190190JX425657None   E11D, S24N, M50I, T206S, I257LB
 191191JX425658None   D6E, E10D, E11D, S24N, V31I, L101I, K156N, F181L, T206S, D256E, D286NB
 194194JX425661None   E11D, V31I, I72V, S119P, T122I, T124A, G193E, I203M, T206S, E212A, D256E, D288NB
 196196JX425663None   V31I, L101I, S119T, T124N, T125A, I135V, F181L, T206S, I208L, E212A, Y227F, S230G, D256E, A265VB
 204204JX425671None   E10D, E11D, V31I, K111T, I113V, S119P, T122I, T124N, T125A, V201I, T206S, D279GB
 209209JX425676None   I72V, K111H, S119T, M154L, T206S, I208L, L234IB
 215215JX425682None   S17N, R20K, V31I, L101V, K111T, T112A, S119T, T124A, T125A, G163T, T206S, S255N, D256EB
 220220JX425687None   E11D, V31I, L101I, K111Q, S119P, E198D, V201I, T206S, D256EB
 222222JX425689None   E10D, E11D, V31I, I72V, S119P, T122I, T206S, I208L, D256EB
 227227JX425694None   E11D, V37I, M50I, I72V, T124A, K156N, V201I, A205S, T206S, I208L, D256E, S283GB
 235235JX425702None   D6E, E10D, V31I, L101I, T112I, T124A, I135V, F181L, V201I, T206S, A265VB
 236236JX425703None   E11D, S24N, V31I, T206S, K215N, D232E, L234FB
 240240JX425707None   K7R, S24N, E69EK, M154IL, V165I, T206SB
 250250JX425717None   E11D, S17T, R20K, A23V, I113V, T124A, T206SB
 253253JX425720None   K14R, V32I, S39C, L45V, I113V, T124A, T125A, V201I, T206SB
 263263JX425730None   D6E, E11D, D25E, P30S, A91S, L101I, K111T, S119P, V201I, T206S, T218S, M275VB
 614614JX425858None   E10D, L101I, T112V, T124A, G134N, I135V, K173R, F181L, V201I, T206S, L234I, S255SG, I268L, S283GB
 705705JX425872None   S17N, D25E, P30A, D41N, L45I, L101I, T112V, I113V, S119T, T125A, E157Q, K160Q, G163E, V201I, T206S, L234IB
 101121101121JX451875None   S39C, M50I, I72V, S119P, T124N, V201I, T206S, K240R, N254K, V281MB
 100844100844JX451880None   S17SI, N18NY, M50I, I72V, K111T, I113V, T124A, T206S, D207EB
 4984649846JX451897None  E92EGE11D, K14R, V31I, M50T, I72V, S119G, T122I, T125A, G193E, T206S, Q214QR, I220V, D279GB
 5736457364JX451905None   K14R, L28I, P30A, S39C, M50MT, T124A, T206S, Y227YSB
 101172101172JX451945None   K7Q, E11D, V32I, I72V, I73V, L101I, T112TI, S119PT, I162V, V201I, I203IM, T206S, I208L, T218I, L234I, D279G, S283GB
 101180101180JX451954None   V31I, I72IV, K111T, K156KN, V201VI, T206S, I220VB
 4793847938JX451956None   S17N, I72V, L101I, S119T, T124A, T125A, K173KR, F181L, G193E, T206S, I208L, T218I, I220L, D288NB
 4140041400JX451957None   E11D, S17T, R20K, Y99F, L101I, T112I, S119P, T206S, V281MB