Integrase Inhibitors

HOME Genotype-Rx Genotype-Pheno Genotype-Clinical hivdb program

Integrase Inhibitors

Subtype	B
Gene	IN
Mutation	T206S
Rx	II-naive
IncludeMixtures	No

References	49
Patients	408
Isolates	424

Sequences matching input query are shown below. Original reference, patient identifier, isolate name, partial treatment histories and accession number are indicated. Complete treatment histories, when available, can be accessed by clicking the isolate name. Sequences may additionally be downloaded in the fasta format, or viewed as individual or composite alignments using the options above. If the user wishes to view individual alignments of isolates for which there are multiple clones, the user can choose to view either an alignment of consensus sequences derived from the clones or an alignment of each clone as well as a consensus sequence.

Author (yr)	Patient	Isolate	Acc#	INIs	INIMinorDRMs	OtherMut	Subtype
Reinke (2001)	R101	R101	AF203329	None		E11D, K14R, L28I, P30A, I72V, T124A, V150A, V201I, T206S, M275V, D286N	B
	R106_1	R106_1	AF203331	None		K111T, T124A, T206S, D286N	B
Burns (2002)	92BR028	92BR028	AF458231	None		T206S, D256E	B
Thomson (2002)	A025	A025	AF408626	None		S17N, A23V, S24G, L28I, I72V, T124A, K136N, V165I, T206S, T218S, L234I, D256E, S283G	B
Kijak (2004)	1918LE	02CM.1918	AY371169	None		K14R, V31I, M50L, T112V, I113V, S119P, T124A, T125A, G163T, D167E, V201I, T206S, T218I, L234I, D256E, S283G	B
McLaughlin (2004)	98USHVTN941c1	98_941c1	AY560110	None		S24A, D25N, S119T, T124N, T125V, E198D, V201I, T206S, D256E	B
Thomson (2004)	99UFRJ_2	99UFRJ_2	AY455780	None		S17N, I72V, I84L, L101I, S119T, T124A, G163E, V165I, V201I, T206S, T218I, L234V, R284RG, D288N	B
de Sa Filho (2005)	BREPM107	BREPM107	AY771588	None		S17N, V32I, S57N, I60M, I72V, S119T, M154I, V165I, V201I, T206S, L234V, D256E, V281M, S283G	B
Carr (2006)	101BA	101BA	DQ826726	None		K14R, V31I, M50L, T112V, S119P, T122I, T124A, T125A, D167E, V201I, T206S, T218I, L234I, D256E, V281M, S283G	B
Galkin (2006)	139089	139089	AY751407	None	V151I	E11D, R20K, V31VI, S39SN, L101I, T122I, T124A, T206S	B
Sanchez (2006)	PCM013	PCM013	AY561237	None		S17N, I72V, S119T, T124A, T206S, E212G, I220L, Y227F, D253Y, A265V, R284G	B
Andresen (2007)	PMVL 025	PMVL 025	EF514702	None		E11D, L101I, K111Q, K173R, F181L, V201I, T206S, E212V, T218I, D256E	B
	CTL 035	CTL 035	EF514710	None		E11D, R20K, V31I, M50I, T112I, T122I, T124N, F181L, V201I, T206S, D256E	B
Badreddine (2007)	J11233	SB_J11233	DQ375254	None		K14R, S17N, L28I, S39C, L45V, M50I, I72IV, L101I, T112V, S119P, T124A, T125A, D167E, V201I, T206S, T218I, L234I, D256E, S283G	B
	J11451	SB_J11451	DQ375268	None		K14R, S39C, L101I, T112V, S119P, T122I, T124A, T125A, D167E, V201I, T206S, T218I, L234I, S283G	B
	J11201	SB_J11201	DQ848138	None		V32I, I72V, G106A, G193E, V201I, T206S, I220V, S230N, R231K, D278N	B
	J11206	SB_J11206	DQ848139	None		V32I, I72V, G193E, V201I, T206S, T218S, I220V, Y227F, S230N, R231K, D278N	B
Brennan (2007)	01BAB058	01BAB058	EF150552	None		E11D, M50I, L101I, K111T, I113V, S119P, T124N, V201I, T206S, I220F	B
	01BAB061	01BAB061	EF150553	None		K7R, E11D, S24N, V31I, I72V, T122I, T124A, T206S, S283G	B
	01BAB062	01BAB062	EF150554	None	V151I	E11D, V31I, L101I, D167E, S195C, T206S, Q216H, A265V	B
	01BAB075	01BAB075	EF150560	None		E10D, E11D, V31VI, I72V, K111T, T124N, V201I, T206S, S230N, L234I, D256E, S283G	B
	01BAB085	01BAB085	EF150563	None	V151I	E10EA, E11ED, A21S, V31I, S119T, T206S, T218I, A265V	B
	01BAB093	01BAB093	EF150564	None		V31I, L101I, D167E, V201I, T206S, I217V, Y227F, S230N, A265V	B
	01CEB045	01CEB045	EF150576	None	V151I	D6N, K7E, S17N, V31I, I72V, V77A, L101I, T125A, T206S	B
	01CEB071	01CEB071	EF150584	None		D6T, K7E, E10D, I72V, T122TI, V201I, T206S	B
	01GOB034	01GOB034	EF150598	None		D6T, E10D, E13D, L101I, T124N, E198D, T206S, D256E	B
	153117-4	153117-4	EF150601	None	V151I	E11D, A23V, V31I, I72V, F181L, V201I, T206S, D256E, S283G	B
	01BAB107	01BAB107	EF150608	None		D6N, K14R, S17N, V31I, T125A, K156N, T206S	B
	01BAB034	01BAB034	EF150619	None		E11D, K14R, S17T, M50I, I72V, T124A, M154I, V165I, V201I, T206S, Y227F, L234V, D256E, S283G	B
Lataillade (2007)	482-023	ML_482-023	EF472723	None		D6E, S17N, S119A, T124N, V126M, I135V, K156N, V201I, T206S, K211R, E212Q, K215N, D288N	B
	53-9028	ML_53-9028	EF472739	None		V31I, M50I, L101LI, T124A, T125A, I135V, K156N, G193R, T206S, Y227F, L234I, A265V	B
	48-1275	ML_48-1275	EF472746	None		K34R, I72V, L101I, T206S, A265V	B
	27B	ML_27B	EF472748	None		V31I, M50I, L101I, T124A, T125A, I135V, K156N, G193R, T206S, Y227F, L234I, A265V	B
	02-1435	ML_02-1435	EF472781	None		R20K, A23V, I72V, L101I, T124A, M154L, F181L, V201I, T206S, K219KR, Y227F, E246ED, S255N, D256E	B
	64B	ML_64B	EF472785	None		E10D, M50I, I72V, A80S, L101I, T206S	B
	65B	ML_65B	EF472786	None		E10D, M50I, I72V, A80S, L101I, T206S, Q285X	B
Li (2007)	PS2008	2008_d0	DQ676874	None		K14R, L28I, P30A, S39C, M50I, G82GE, L101I, T124A, E152EK, E157EK, V201I, T206S, T218S, D253E, M275V	B
		2008_d182	DQ676875	None		K14KR, D25DN, L28I, P30A, S39C, M50I, L101I, T124A, V201I, T206S, T218S, D253E, V259VI, M275V	B
		2008_d377	DQ676876	None		K14R, L28I, P30A, S39C, M50I, L101I, T124A, V201I, T206S, T218S, D253E, M275V	B
	PS2016	2016_d0	DQ676877	None		E11D, V31I, C56S, L101I, K111N, S119P, T122I, V201I, T206S, D256E	B
		2016_d193	DQ676878	None		E11D, V31I, C56S, L101I, K111N, S119P, T122I, V201I, T206S, V249VI, D256E	B
		2016_d380	DQ676879	None		E11D, V31I, C56S, L101I, K111N, S119P, T122I, V201I, T206S, D256E	B
	PS2019	2019_d0	DQ676880	None		E11D, V31I, C56S, L101I, K111N, S119P, V201I, T206S, D256E	B
		2019_d171	DQ676881	None		E11D, V31I, C56S, L101I, K111N, S119P, V201I, T206S, T218TI, D256E	B
		2019_d367	DQ676882	None		E11D, V31I, C56S, L101I, K111N, S119P, V201I, T206S, Q214QH, T218TS, D256E	B
Sa-Filho (2007)	BREPM1033	BREPM1033	EF637050	None	P145T	E11D, A23V, S24G, L28I, V37I, I72V, T122I, V201I, T206S	B
Van Baelen (2007)	Pt5	5-1		None		D6E, K14R, V31I, A49T, Y99F, L101I, K111T, I113V, S119T, S123G, T124A, T125A, K127R, I135V, V201I, A205S, T206S, Q216K, S230N, D256E	B
	Pt11	11-1		None		E11D, S24N, V31I, M50I, L101I, K111T, S123G, K127R, T206S, D232E, D278E	B
	Pt18	18-2		None		D6E, E10D, E13D, E96D, L101I, S119R, S123G, T124A, K127R, T206S, S230N, D279G, S283G, R284G	B
	Pt21	21-1		None		S17N, M50I, L101I, S119P, T122I, S123G, T124A, K127R, T206S, D256E	B
	Pt41	41-2		None		D6E, E11D, S17N, A21T, L101I, K111T, I113V, T122I, S123G, T125A, K127R, T206S	B
Buzon (2008)	Pt8	Pt8Y2001	EU883817	None		R20RK, F185Y, I203M, T206S, I208L	B
	Pt12	Pt12Y1993	EU883823	None		E11D, S17C, S39R, M50MI, I72V, K111KAET, I113IV, T206S, D256E, A265V	B
		Pt12Y2001	EU883824	None		E11D, E13D, S17C, A23AV, S39R, I72V, L101I, K111A, T206S, D256E	B
		Pt12Y2003	EU883825	None		E11D, E13D, S17C, A23AV, V31VI, S39R, I72IV, L101I, K111T, T206S, D256E, Y271YF	B
		Pt12Y2006	EU883826	None		D3E, E11D, E13D, S17C, A23AV, S39R, L101I, K111T, T206S, D256E	B
	Pt17	Pt17Y2000	EU883838	None		E10D, M50I, M178MR, V201I, T206S, D229DN	B
		Pt17Y2004	EU883839	None		E10D, M50I, I84V, M154I, V201I, T206S	B
	Pt22	Pt22Y1998	EU883854	None		R20RK, V31VI, L101I, I113V, T206S, I208L, D256E, S283G	B
		Pt22Y2000	EU883855	None		R20K, V31VI, L101I, I113V, T206S, I208IL, D256E	B
	Pt36	Pt36Y1995	EU883895	None		S17N, M50MI, I72V, L101I, T206S, D232E, D256E, A265V, S283SG	B
		Pt36Y2005	EU883896	None		S17N, M50MI, I72V, L101I, T206S, D232E, D256E, A265V	B
	Pt37	Pt37Y1994	EU883897	None		E13EG, M22I, A23V, L28I, S39C, M50I, I72IV, T206S	B
		Pt37Y2004	EU883898	None		M22I, A23V, L28I, S39C, M50I, I72IV, T206S	B
Luk (2008)	BA-040	06CM-BA-040	EU693240	None	L68V	E11D, K14R, V31I, M50L, I72IV, L101I, T112V, S119P, T122I, T124A, T125A, G134D, G163V, D167E, V201I, T206S, I208M, T218I, L234I, D256E, S283G	B
Malet (2008)	3	3_D0		None		R20K, A23V, I72V, T124A, I204V, T206S	B
Miura (2008)	BEC7	BEC7	EU517862	None		S24SG, I72V, K111KT, M154L, V165I, T206S	B
	BEC24	BEC24	EU517865	None		S17N, I72V, T124N, V201I, T206S, A265V	B
	BEC57	BEC57	EU517879	None		E11D, S24G, D25E, S39C, L45Q, S119P, T122I, T125A, T206S, N254NK, S283N	B
Yamaguchi (2008)	J11233	J11233	EU697906	None		K14R, S17N, L28I, S39C, L45V, M50I, I72IV, L101I, T112V, S119P, T124A, T125A, D167E, V201I, T206S, T218I, L234I, D256E, S283G	B
	J11451	J11451	EU697908	None		K14R, S39C, L101I, T112V, S119P, T122I, T124A, T125A, D167E, V201I, T206S, T218I, L234I, S283G	B
Brumme (2009)	INT_3450	INT_3450	FJ812901	None		D6DE, E10EA, E11D, S17SN, V37VI, I72V, K111A, T112A, S119P, T125A, V201VI, T206S, I208IL	B
	INT_3453	INT_3453	FJ812904	None		E10D, V31I, M50MI, I113V, T124N, T125A, T206S, A265AV	B
	INT_3461	INT_3461	FJ812912	None		D6E, K7R, E11D, V32I, V37I, I72V, S119P, T122I, T125A, V201I, T206S	B
	INT_3469	INT_3469	FJ812920	None		S17N, I72V, I113V, T124A, T206S, D256E	B
	INT_3476	INT_3476	FJ812927	None		K7KR, I72V, S119ST, T124A, K156R, I204IV, T206S, I217IV, S230N, R284G	B
	INT_3480	INT_3480	FJ812931	None		E11D, S17C, I72V, L101I, S119P, T122I, T206S	B
	INT_3481	INT_3481	FJ812932	None		E11D, V32I, I72V, I84V, S119G, T122I, V201I, T206S	B
	INT_3489	INT_3489	FJ812940	None		I72IV, I113IV, T124A, T206S, K215N	B
	INT_3499	INT_3499	FJ812950	None		V31VI, E35EK, I72IV, L101LI, K136N, K173KR, F181L, T206S	B
	INT_3505	INT_3505	FJ812956	None		E11D, S24N, T206S, D232E	B
	INT_3526	INT_3526	FJ812977	None		E11D, V37I, I72V, L101I, S119SAGT, T122I, T124A, K156N, S195C, T206S, S283SG	B
	INT_3560	INT_3560	FJ813011	None		V31I, I72V, L101I, T122TI, T124A, G193E, T206S, A265AV, D278N	B
	INT_3572	INT_3572	FJ813023	None		D6E, E11D, S17C, A23AV, I72V, S119P, T122I, T124A, T206S, I208IL, K211KR, S283G	B
	INT_3638	INT_3638	FJ813089	None	V151I	S17SN, V31I, S119ST, T124A, T125A, I135IV, T206S, Y227F, S230G, D256DE	B
	INT_3639	INT_3639	FJ813090	None	T97A	E11ED, V31I, I72IV, L101I, K103R, K111T, S119T, T125A, V126T, D167DE, V201I, T206S, I208L, E212A, T218TS, S230N, D232E	B
	INT_3662	INT_3662	FJ813113	None		E11D, V32I, I72V, T124S, T125M, V126M, M154L, V201I, T206S	B
	INT_3664	INT_3664	FJ813115	None		K14R, S17C, M50I, I72V, I113V, T124A, T125A, T206S	B
	INT_3670	INT_3670	FJ813121	None		I72IV, T112I, I113MV, S119P, T124N, T125A, T206S	B
	INT_3682	INT_3682	FJ813133	None		D6E, E10A, E11D, S17N, A23AV, V31I, K111KT, S119PT, T124N, T125A, I203M, T206S	B
	INT_3688	INT_3688	FJ813139	None	T97TA	D6E, S17N, M50I, S57SG, I72V, I113IV, T124N, T125A, E198Q, I204V, T206S	B
	INT_3691	INT_3691	FJ813142	None		D6E, S17N, V31I, V32VI, I72V, T124N, T125A, E198Q, I203M, I204IV, T206S, S230SN, S283SN	B
	INT_3699	INT_3699	FJ813150	None		K111T, I113IV, T124TA, T206S, Q274QR	B
	INT_3701	INT_3701	FJ813152	None		E11D, V31I, I84L, L101I, K156N, R187K, T206S, I208L, D256E	B
	INT_3749	INT_3749	FJ813200	None		D6E, K14KR, S17SN, V32I, I72IV, T124N, T125A, E198Q, I203M, I204V, T206S, S230SN, L234LV	B
	INT_3783	INT_3783	FJ813234	None		D6E, S17N, V32I, I72V, L101LI, T124N, T125A, E198Q, I203M, T206S	B
	INT_3784	INT_3784	FJ813235	None		S39C, L45Q, I72V, L101LI, S119ST, V201I, T206S, I208IM, T210TA, K211KQ, E212EAG, S230SN	B
	INT_3794	INT_3794	FJ813245	None		E11D, V31I, L101LV, K111T, S119P, T206S, D253E	B
	INT_3795	INT_3795	FJ813246	None		E11D, L28I, V37I, S39C, M50I, I113V, S119P, T125A, K173R, V201VI, T206S, K211R	B
	INT_3799	INT_3799	FJ813250	None		D6E, E10D, K14KR, V31VI, V32I, M50MI, L101I, T124N, T125A, E198Q, I204V, T206S	B
	INT_3801	INT_3801	FJ813252	None		S17N, L28I, S39SC, L45GIRV, I113IV, T124A, T206S	B
	INT_3807	INT_3807	FJ813258	None		E11D, K14KR, R20RK, S24SG, D25E, V31VI, V32VI, S39C, I72V, K111KR, S119P, G193E, V201I, T206S, I208IL, T210TI, K211R, E212EA, D279GS, S283SG	B
	INT_3810	INT_3810	FJ813261	None		E11D, S24N, V88I, L101I, T112TI, T122TI, T124TN, T125TAMV, V126VA, I200IL, V201VI, T206S	B
	INT_3813	INT_3813	FJ813264	None		E11D, S17C, V31I, V32VI, G59GE, K71KR, I72IV, V77VA, L101I, S119P, T122I, I182IV, K188R, T206S, K211KR	B
	INT_3814	INT_3814	FJ813265	None		K7KR, E11ED, V31I, L101I, K111T, S119P, T122IV, T206S, D279G, R284RG	B
	INT_3817	INT_3817	FJ813268	None		D25E, L28I, V31VI, I72V, S119G, T122I, T124TA, T125A, V201I, T206S, A265V, R269K	B
	INT_3861	INT_3861	FJ813312	None		K14R, V31VI, T112V, S123C, T124N, T125A, V126L, T206S, S230N, D232E, D256E	B
	INT_3884	INT_3884	FJ813335	None		S17N, I113V, T124TADN, T125TA, T206S, I208L, L234I, A265V	B
	INT_3891	INT_3891	FJ813342	None		S24N, D25E, K103R, T112A, S119P, T122I, T124A, T125A, T206S, I208IM, E212A, Q216H, T218S, K219N, D286DN	B
	INT_3902	INT_3902	FJ813353	None		A23AV, L28I, S39C, I72V, L101I, K111T, I113V, S119T, T206S	B
	INT_3904	INT_3904	FJ813355	None		L101LI, F181L, T206S	B
	INT_3912	INT_3912	FJ813363	None		E11D, S17C, I72V, L101I, S119P, T122I, T206S	B
	INT_3934	INT_3934	FJ813385	None	L68LV	E11ED, S24N, I72IT, S119T, K136Q, H171HQ, V201I, T206S	B
	INT_3936	INT_3936	FJ813387	None		E11D, S24N, V31I, I72V, K111R, T112A, S119P, T122I, T125A, R187K, T206S	B
	INT_3950	INT_3950	FJ813401	None		E11D, S17C, A21S, V32I, I72V, L101I, S119P, T122I, T206S	B
	INT_3953	INT_3953	FJ813404	None		K14R, V32I, D41N, I72V, L101I, V201VI, T206S, I208L, V260VI	B
	INT_3956	INT_3956	FJ813407	None		S24SN, I72V, T206S, L234I, D253E	B
	INT_3970	INT_3970	FJ813421	None		K7KR, K14KR, L101I, K111T, S119P, T122I, T125TA, S195C, A205AS, T206S, D256E	B
	INT_3971	INT_3971	FJ813422	None		A21AT, V31I, L172LP, T206S, N222NH, S283G	B
	INT_3976	INT_3976	FJ813427	None		S17SN, I72V, T124A, T125TA, G193E, T206S	B
	INT_3986	INT_3986	FJ813437	None	T97A	E11D, V31I, I72V, I84IM, L101I, K103R, K111T, S119T, T125A, V126T, V201I, T206S, I208L, E212A, T218S, S230N, D232E	B
	INT_3987	INT_3987	FJ813438	None		E11A, S39C, L45I, M50I, I72IV, L101I, K111T, T112A, T125A, E157Q, K160Q, V201I, T206S	B
	INT_3988	INT_3988	FJ813439	None		S17N, V31I, G59D, I72V, S119G, T122I, T125A, V201I, T206S, L234I, A265V	B
	INT_3998	INT_3998	FJ813449	None		E11D, S24N, M50MI, I72V, L101LI, I113IV, S119P, K156KR, V201VI, T206S, T218S, S283SG	B
	INT_4017	INT_4017	FJ813468	None		L101LIV, F181L, T206S, S283G	B
	INT_4018	INT_4018	FJ813469	None		E10D, E11D, A21AT, L45Q, K111R, S119G, T122I, T125A, T206S, K219N, N222K, L234I	B
	INT_4029	INT_4029	FJ813480	None		K7KR, V31I, K156N, T206S, I208IL	B
	B8526	B8526	GQ371810	None		M50I, S119SG, T122TI, I141V, T206S, R262RK, D270DN	B
	B9543	B9543	GQ371813	None		A23AV, K34R, T124TA, V201I, I203IM, T206S	B
	D3579	D3579	GQ371820	None		E11D, D25E, V31I, V32I, L101V, S119T, K188R, V201I, I203M, T206S	B
	D4523	D4523	GQ371822	None		K7Q, E11D, R20RK, V31I, I72V, L101I, I113V, T122I, T124A, T206S, I208M, D256E, A265V	B
	D6512	D6512	GQ371826	None		S17N, I72V, L101I, G163GE, T206S, S255SR, S283SN	B
	D7533	D7533	GQ371830	None		E11D, V31I, M50I, I72V, E96D, L101I, S119P, T122TI, K156N, E157Q, F181L, G193GE, V201I, T206S, I208IL, K211KQR, E212EA, S230N, D256E, I268IT	B
	D8520	D8520	GQ371832	None		D6E, E11D, A21T, A23V, T122I, V201I, T206S, K219Q, E287EG	B
	E7538	E7538	GQ371856	None		K7R, S17N, T124N, T125V, I135V, V201I, T206S, I208L, I220M, Q221G	B
	F1531	F1531	GQ371863	None		D6E, E11D, K14R, R20K, L28I, V31I, V32I, V37I, I72V, I113V, S119P, T122I, T124N, K156R, V201I, T206S, S283G	B
	F2528	F2528	GQ371865	None		K14R, V31I, I72V, A91S, Q95H, T112I, I113V, S119P, T125A, M154L, V201I, T206S, D256E	B
	F5510	F5510	GQ371873	None	L68V	E11D, N27G, V31I, V32I, M50I, K111T, T124A, S195SR, V201I, T206S, K219KT, S230N	B
	F8527	F8527	GQ371881	None		S17N, S24D, V31I, I72V, I113V, T124A, T125A, I182V, T206S, R262RK	B
	G0578	G0578	GQ371886	None		V31I, L101I, K111Q, T124S, T125A, I135V, D167E, F181FL, V201I, T206S, I257IL, A265V	B
	G2506	G2506	GQ371888	None		S17N, I72V, L101I, K111T, T124N, T125A, I135V, D167E, S195SR, T206S, T218I, R262RK	B
	G8521	G8521	GQ371903	None		I72V, K111R, T112I, T125V, I141V, K160R, D167E, V201I, T206S, I220V	B
	H1549	H1549	GQ371910	None		S17N, A98AG, L101I, K111RS, S119ST, T124N, T125TA, T206S, D207E, S230N, D232E, D256E	B
	H4570	H4570	GQ371919	None		D6E, E11D, S17N, V31I, I72V, I113V, S119P, T122I, T125A, K156N, G163Q, T206S, R262RK	B
	H7518	H7518	GQ371922	None		E11D, K14R, S24N, S39C, I113V, S119P, T124N, T125A, I135IV, V201I, T206S, L234I	B
	H8577	H8577	GQ371928	None		S17N, I72V, T124N, G163G*, V201I, T206S, S230N, D232E, A265V, S283D	B
	J0573	J0573	GQ371933	None		V37I, G59E, L101I, T124N, F181L, V201I, T206S, D256E, R262RK, I268L, D270H	B
	J9520	J9520	GQ371951	None		D25E, K34R, I72V, F100S, L101I, T125A, M154I, V165I, K173KN, V201I, T206S, R262RK, D270E	B
	L0505	L0505	GQ371976	None		E10D, K14R, V31I, L101I, S119T, T124TA, K156N, I162IM, K173KN, V201I, T206S, I208L, K211R, E212A, D256E, R262RK	B
	L2570	L2570	GQ371983	None		L101I, T112AV, S119T, T206S, I208L, E212A, K215N, Q216H	B
	L4548	L4548	GQ371989	None		K7R, T124N, R187RK, T206S, I208IL, K219N, N222K	B
	M5516	M5516	GQ372010	None		I72V, K111T, T124A, I135IV, F181L, V201I, T206S, T218TI, I251IL, N254Q, S255G	B
	N1505	N1505	GQ372027	None		D6EK, S17N, V32I, I72V, L101I, I135IV, G193E, T206S, R262RK, A265AV, D278DN, D286N	B
	N4510	N4510	GQ372033	None		K7KR, S17N, V31I, L63I, I72V, L74I, L101I, K111T, S119T, T124A, I135V, K173R, V176L, T206S, D207E, D256E	B
	N6522	N6522	GQ372039	None		G70E, I72V, T124A, M154L, G193D, V201I, T206S, Q216H, Y226F, L234I, K266KR, I268L, D270H	B
	O1570	O1570	GQ372054	None		D6E, E10D, E11D, S17N, D25E, V31I, M50T, I72V, L101I, S119P, T122I, T124A, T125A, K160T, I161IL, T206S	B
	O6577	O6577	GQ372067	None		E11D, M22L, S24N, V37I, L101I, I113IV, S119P, T122TI, T125A, V176VI, T206S	B
	P6518	P6518	GQ372090	None		E10D, E11D, V32I, L101I, S119G, T122I, T206S, L234I, D256E, R262RK, R284G, D286N	B
	Q3531	Q3531	GQ372106	None		M50I, S57N, I72V, L101I, T112A, T125A, I135V, Y194C, V201I, T206S, I220L, Y227F, N254K, A265V	B
	Q5528	Q5528	GQ372112	None		E11D, S17C, L101I, T124N, T125A, R166RS, I182V, T206S, I208L, L234I, D256E	B
	Q8509	Q8509	GQ372116	None		E11D, S24N, D25E, L101I, S119P, T122TI, G193E, T206S, I208IL, S230N, D286N	B
	R9506	R9506	GQ372142	None		S17N, V31I, I72V, L101I, K111Q, T112A, T124A, T206S, D256E, S283G	B
	S6524	S6524	GQ372161	None		K14KR, S17N, I113V, T124A, T125A, T206S, T218TS, D253E, D256E, S283SG	B
	S9533	S9533	GQ372169	None		S17N, A23AV, K34R, L45LQ, M50I, I72V, T124A, K160L, V201I, T206S, L234LF, D253DH, D256DE, D270E, D279G	B
	T0548	T0548	GQ372173	None		E11D, A23V, K111Q, S119P, V201I, T206S, Q221T, S255G	B
	V0570	V0570	GQ372200	None		E11D, H16HP, Q53QE, I72V, S119P, T122I, T124N, T125A, M154L, G193R, V201I, T206S	B
	V2503	V2503	GQ372202	None		K14R, R20K, K34R, L101I, S119R, S123C, G193E, T206S, I208IM, D256E, D286N	B
	V5578	V5578	GQ372210	None		I72V, I84M, S119P, M154L, V201I, A205S, T206S, D207E, T218I, D256DE	B
	W0533	W0533	GQ372220	None	G163GR	D6E, E11D, S24N, K34R, M50I, S119T, T124A, V201I, T206S, I220IL	B
	W9500	W9500	GQ372241	None		E11D, K14R, R20RK, T124A, F181X, G193E, T206S, D279G	B
	X6579	X6579	GQ372262	None		D6E, E11D, E13D, V37I, I72V, T112I, S119P, T122I, V201I, T206S, D256E	B
	X7535	X7535	GQ372265	None		D6DE, K14R, V32I, E96D, L101I, K103R, T124N, T125V, I135V, V150VI, G193R, T206S, I208L, S230N	B
	Y1525	Y1525	GQ372275	None		K7R, V31I, I72V, L101I, K111KR, T124TA, I135V, M154L, F181L, T206S, I220M	B
	Y4539	Y4539	GQ372284	None		M50I, L63I, I72V, T124N, G193GR, V201I, T206S, I208L, E212A, A265V	B
	Z3571	Z3571	GQ372303	None		S17N, I72V, A91E, L101I, S119R, T122I, T124A, A205S, T206S, T218S, Y227F, D256E	B
	Z8538	Z8538	GQ372315	None		I72V, A91G, L101I, S119P, T122I, T124A, K188R, T206S, K219KT, I220IL, N222NK, I267IV	B
Canducci (2009)	pt1	pt1bl	EU908742	None		S17N, S24N, I113V, S119T, T124A, T125A, V165I, T206S, Q216H	B
	pt7	pt7bl	EU908765	None		S24A, L101I, T112TI, T125A, I135V, F181L, T206S, D229E, S230N, D256DE	B
Delelis (2009)	Pt3	Pt3		None		I113V, T124NS, T125A, T206S, I220L, Y227F	B
Eshleman (2009)	BrRJ96-011	BrRJ96-011	FJ480328	None		V31I, K111T, S119T, T125M, T206S, I220IM	B
Garrido (2009)	4	INT-4	GU216851	None		E11D, M50I, S57N, I72IV, I113V, S119SPRT, V201I, T206S, I208L, Y227F, S255SN, D256E, A265V	B
	5	INT-5	GU216852	None		E11D, S24N, V31I, M50T, I72V, T125V, T206S	B
	8	INT-8	GU216855	None		L28I, P30A, I72V, T112I, T122TI, T124N, D167E, V201I, T206S, V260VL	B
	24	INT-24	GU216871	None		E11D, M50I, S57N, I113V, V201I, T206S, I208L, Y227F, D256E, A265V	B
	57	INT-57	GU216904	None		K7K*, S17N, V31VI, M50I, I72IV, I113V, S119R, T122IN, T124A, T125A, T206S, Y227F, L234V, D256E, A265V, D279DN	B
	58	INT-58	GU216905	None		E11D, S24N, V31I, M50T, I72V, T125V, T206S	B
	62	INT-62	GU216909	None	S147SR	E11D, S24G, D25E, L28I, V31I, L45IV, I72IV, K156N, T206S, T218S, D279N	B
	73	INT-73	GU216920	None		L28I, P30A, K34KR, I72V, T112I, T124N, D167E, V201I, T206S	B
	81	INT-81	GU216928	None		E11D, K14R, S17T, S39C, M50I, T124A, T206S, D279DN	B
	112	INT-112	GU216959	None		K14KR, R20K, V31I, T112TI, T124A, V201I, I203M, T206S, S230N, D279DN	B
	125	INT-125	GU216972	None		S17N, I72V, I113V, S119P, T124N, T206S, I208L, K219N, N222K, S255G, D279DN	B
	133	INT-133	GU216980	None		E11D, S24G, S39C, I60V, I72V, L101I, K111R, I113V, S119P, T124A, I203M, T206S, I220F, Q221H, D279DN	B
	165	INT-165	GU217012	None		S57N, L101I, I113L, T124A, V201I, A205S, T206S	B
	169	INT-169	GU217016	None		L101I, I113L, T124A, G134S, V201I, A205S, T206S	B
	213	INT-213	GU217060	None		V31I, M50I, I72V, L101I, S119P, T122I, T124A, T206S, D207DE, D256E	B
	215	INT-215	GU217062	None		E11D, S24A, V31I, A91T, L101I, S119R, T125S, T206S, I208L, T210S, K211S, E212I, T218S, D232E, D256E	B
	225	INT-225	GU217072	None		E11D, A23V, L28M, V31I, V32I, S39N, T93S, L101I, T124N, V201I, T206S, S230N	B
	228	INT-228	GU217075	None		E11D, K14R, V31I, L45V, M50I, L101V, T125A, F181L, G193D, V201I, I204S, T206S, Y226YD, D256E	B
	246	INT-246	GU217093	None		E11D, R20K, I72V, L101I, T112TI, I161L, G193E, V201I, T206S	B
	255	INT-255	GU217102	None		S17N, V31I, I72V, K103KR, T112I, T124N, T125V, K156N, V201I, T206S	B
	257	INT-257	GU217104	None		K14R, S39C, I72IV, I113V, S119P, T124N, I203M, T206S, D207E, S230N, D256E, V260VI	B
	260	INT-260	GU217107	None		V31VI, I72V, T124NS, K156N, V201I, T206S, D256E	B
	262	INT-262	GU217109	None		E11D, S24N, I60V, I72V, T112I, I113V, S119P, T122TI, T124N, V201I, T206S, T218S, I220V	B
	276	INT-276	GU217123	None		S17N, M50I, Q62K, K111T, I113V, T124A, T125A, T206S, D256E	B
	278	INT-278	GU217125	None		S24A, L28I, I60L, L101I, I113V, S119P, I182V, T206S, K215N, D232E	B
	289	INT-289	GU217136	None		V31VI, V32IL, S39SC, L45V, M50I, I72V, A91T, L101I, T206S, K219N, N222K	B
	293	INT-293	GU217140	None		Q44K, I72V, T112TI, I113V, S119P, T122TI, E152G, T206S, T218S	B
	298	INT-298	GU217145	None		S17T, A23V, L28I, V37I, K71N, I72V, S119R, T125A, K156N, D167G, T206S, L234V	B
	305	INT-305	GU217152	None		V31I, I72V, L101I, K111T, T124A, T206S, L241LR	B
	317	INT-317	GU217164	None	L68I	K7Q, E11D, P30S, I60V, I72V, I73V, L101I, S119T, T124A, V201I, I203M, T206S, I208L, D279G, S283G	B
	318	INT-318	GU217165	None		E11D, K14N, V32I, E96D, L101I, S119P, T206S, D232N, D256E, A265V	B
	324	INT-324	GU217171	None	L68I	G4E, K7Q, E11D, A23T, V32I, I72V, I73V, L101I, I113V, S119P, T122TI, V201I, T206S, I208L, T218I, S230G, D279G, S283G	B
	327	INT-327	GU217174	None		I5L, E10D, E11D, A23V, I72V, S119P, T122I, T124A, K127R, V201I, T206S, A265V	B
	328	INT-328	GU217175	None		E10D, E11D, A23V, I72V, S119P, T122I, T124A, V201I, T206S, A265V	B
	333	INT-333	GU217180	None		K14KR, S39C, I72V, L101V, K111T, T124A, T125A, V126L, V201I, T206S, D207E, S283G	B
	337	INT-337	GU217184	None		V31I, M50I, T206S, D232E, A265V	B
	338	INT-338	GU217185	None		S17N, S24N, L28I, T112A, T124S, T206S, A265V	B
	345	INT-345	GU217192	None		V31I, L101I, S123G, T124A, G163A, I200M, T206S, I208L, I217IT	B
	346	INT-346	GU217193	None	V54I	E11D, R20K, V31I, L101I, K111T, T122I, T124N, T206S	B
	347	INT-347	GU217194	None		L104I, K111Q, S119T, T206S, D256E	B
	355	INT-355	GU217202	None		E11D, A21T, A23V, I113V, S119G, T124N, T125A, T206S, D279G	B
	384	INT-384	GU217231	None		E11D, H12T, S17N, R20K, V31I, I72V, L101I, K111T, T124A, A133T, I182V, V201I, T206S, Y227F, D253Y, D256E, A265AV, S283G	B
	386	INT-386	GU217233	None		E11D, S17T, R20RK, A23V, T112I, V201I, T206S, T218S	B
	389	INT-389	GU217236	None		E11D, V31VI, G70E, L101I, S119R, T206S	B
	407	INT-407	GU217254	None	V151I, R263RK	E11D, S24N, D25E, V31I, I72V, I113V, S119P, T206S	B
Kousiappa (2009)	CY018	CY018	FJ388890	None		E11D, S17T, A23V, L101I, S119P, I135V, F181L, T206S, Y227F, L234I, D256E, V260I	B
	CY037	CY037	FJ388899	None		E11D, S24A, I72V, S119P, M154L, T206S, T218S	B
	CY055	CY055	FJ388904	None		N18S, A23V, T112I, I113V, S119P, T124N, T125A, G134R, T206S, R224Q, D232E, R269K	B
	CY067	CY067	FJ388911	None	V151I	E11D, S24N, I72V, K186E, T206S, S283G	B
	CY074	CY074	FJ388915	None		E11H, K14R, S24N, P30S, V31I, I72V, T125A, V126L, I135V, S195H, T206S, T218S, N222Q, I268L	B
	CY075	CY075	FJ388916	None		K14R, V88I, T112I, I113V, S119P, T124N, T125A, T206S, D232E	B
	CY130	CY130	FJ388934	None		E10D, M50I, I72V, L101I, K111Q, S119G, T122I, T124A, T125A, T206S, Q216H, L234I	B
	CY141	CY141	FJ388939	None		E10D, M50I, I72V, L101I, K111Q, S119G, T122I, T124A, T125A, T206S, Q216H, L234I	B
	CY100	CY100	FJ388964	None		E11D, V37I, I72V, L101I, T112I, I113V, T122I, T124A, T125A, T206S, N222H	B
	CY038	CY038	FJ388900	None		E11D, S24A, V31I, I72V, M154L, V201I, T206S, T218S, I220L	B
Low (2009)	ahi7	ahi7_99	FJ786274	None		E11D, A21T, A23V, D25E, L101I, S119G, T122I, T125A, G193E, T206S, L234V, D256E, D279G	B
	ahi8	ahi8_06	FJ786275	None		R20K, S119T, K156N, T206S, I208L, E212A	B
	ahi9	ahi9_02	FJ786276	None		K14R, L28I, P30A, S39C, I72V, T124A, I203M, T206S, I208L, S283G	B
	ahi13	ahi13_05	FJ786280	None		S17N, I72V, F100Y, L101I, T124N, I141T, V150A, V201I, T206S, I208L, D256E, S283G	B
	ahi14	ahi14_06	FJ786281	None		E11D, I60M, I113V, T124A, V126F, V165I, T206S	B
	ahi26	ahi26_05	FJ786293	None		E11D, S24N, P30S, T112I, V201I, T206S	B
	ahi33	ahi33_06	FJ786300	None		E11D, D25E, V31I, L101I, V201I, T206S, K215N, D256E, I268L, R284G, D286N	B
	F-15	F-15	FJ786302	None		I72V, T124N, T125A, V126L, M154L, V201I, T206S, C280S	B
	ahi45	ahi45_02	FJ786312	None		E11D, V31I, M50I, L101I, G163E, F181L, V201I, A205S, T206S, T218S, S230N	B
	ahi48	ahi48_01	FJ786315	None		E10D, V31I, M50V, I72V, V79A, L101I, T122I, T124A, V201I, T206S, I208L, T218S, I220L, Y227F, L234I	B
	ahi52	ahi52_98	FJ786319	None		E10G, K14R, V32I, E96D, L101I, K103R, T124N, T125A, I135V, G193R, T206S, I208L, S230N	B
	ahi53	ahi53_07	FJ786320	None		V31I, I72V, K111T, I113V, T124A, T206S	B
	ahi58	ahi58_01	FJ786325	None		D6K, E10D, D25N, M50I, I72V, L101I, S123C, K156N, T206S	B
	ahi64	ahi64_98	FJ786331	None		S17N, N27D, L45V, L101I, K136N, T206S, I208L, E212A, D256E	B
	ahi70	ahi70_01	FJ786337	None		E11D, V31I, M50I, L101I, G163E, F181L, V201I, A205S, T206S, T218S, S230N	B
	ahi72	ahi72_96	FJ786339	None		K7R, S17N, I72V, K111T, I113V, T124A, T125A, T206S	B
	ahi73	ahi73_01	FJ786340	None		E11D, S24N, V31I, M50T, A91T, T206S, S230N, D232E, K273Q, D278N, S283G	B
	ahi85	ahi85_03	FJ786353	None		S17N, I72V, L101I, T124A, K156N, V165I, V201I, I203V, T206S, D207E, I208L, D256E	B
	ahi91	ahi91_03	FJ786359	None		E11D, S24N, K156N, V201I, T206S, T218S	B
	ahi92	ahi92_03	FJ786360	None		E11D, S24N, S119T, V201I, T206S, I217V, T218S, D256E, S283G, R284G	B
	K-2	K-2	FJ786378	None		R20K, I72V, I113V, K188R, G193E, V201I, T206S, D278G	B
	mdr2	mdr2	FJ786385	None		S17N, S24A, L101I, T112I, T124N, T206S, D253E, D256E	B
	mdr6	mdr6	FJ786389	None	V151I	S17N, A23V, L28I, P30A, I72V, L101I, S119T, T124A, T125A, F181L, V201I, T206S	B
	mdr8a	mdr8a	FJ786393	None		S24N, L101I, V165I, V201I, T206S, K215Q	B
	mdr8b	mdr8b	FJ786394	None		S24N, L101I, V165I, V201I, T206S, K215Q	B
Nadai (2009)	147691	147691	EU839599	None		K14R, S24N, D25E, I72V, T112R, S119P, T124A, K136Q, T206S, K215R, Q216K, K219N, N222K, S230N, D253E, N254G	B
Passaes (2009)	BR.RJ.FT46	BR.RJ.FT46	HM026767	None		K7R, E11D, V31I, I72V, L101V, M154L, T206S	B
	BR.RJ.FT14	BR.RJ.FT14	HM026775	None	E138D	D6N, E13D, V32I, K42R, L101I, T124N, T206S, D229E, R284G	B
	BR.RJ.FT54	BR.RJ.FT54	HM026780	None		E11D, R20K, L45Q, I72V, I113V, V201I, T206S, D256E, M275MV	B
	BR.RJ.FT56	BR.RJ.FT56	HM026781	None	V151I	E11D, S24N, V31I, I72V, V201I, T206S, T218I, D256E	B
	BR.RJ.FT59	BR.RJ.FT59	HM026782	None		K7R, K14R, V31I, I72V, L101I, K111Q, T112V, T124A, T125A, G163Q, D167E, V201I, A205S, T206S, D207E, T218S	B
	BR.RJ.SB97	BR.RJ.SB97	HM026787	None		V32I, S39C, I72V, V201I, T206S, K219N, N222K, S283G, R284I	B
Sichtig (2009)	13-E	13-E	FJ183518	None		K111Q, T112I, T124N, T125V, T206S, D256E	B
	31-E	31-E	FJ183528	None		K14R, V31I, I72IV, I73IV, L101I, T124A, K156KR, V176VL, G193E, T206S	B
	Pt07	3690	FJ183629	None		E11ED, K14R, A21T, A23V, V88I, I113V, S119P, T124N, T125A, T206S	B
	4974	4974	FJ183645	None		P30A, I72V, S119P, I200M, V201I, T206S	B
	4995	4995	FJ183651	None		S17N, V32I, L45V, I113V, T124N, T125A, T206S, T218S, I220V, S255SN	B
	5108	5108	FJ183658	None		S17N, V31I, I72V, S119P, T124A, G193E, T206S, D256E	B
	4773	4773	FJ183662	None		M50I, T124TA, T206S, R231RK, L234G, N254Q	B
van Hal (2009)	W1	W1	FJ554674	None		E11D, V31I, T124N, T125V, T206S, Q285P	B
	W2	W2	FJ554675	None		S24D, V31I, S57C, G70E, I72V, L101I, S119R, T125V, V176L, G193E, V201I, T206S, K215N, S230N, S283G	B
	W9	W9	FJ554682	None		S17N, S39C, K71Q, L101I, T112I, S119R, T122V, T124N, T125A, T206S, L234V, I268L	B
	W10	W10	FJ554683	None		K14R, V32I, L45I, M50I, V201I, T206S, D256E	B
	W11	W11	FJ554684	None		E11D, V31I, M50L, I72V, L101I, I204V, T206S, A265V	B
	W16	W16	FJ554689	None		E11D, E13D, L101I, K111T, I113V, T122I, T124A, V201I, T206S, D232E, D253H, D256E, D279G, S283G	B
	W22	W22	FJ554695	None		E11D, S24N, V32I, S39C, M50L, L101I, S119G, T124N, I135V, K136N, V201I, A205S, T206S, D253E, N254K	B
	W23	W23	FJ554696	None		E11D, A23V, L45Q, K188R, V201I, T206S, D232E, A265V	B
	W36	W36	FJ554709	None		K7Q, D55G, A91T, T124A, T206S, I208L, K215N, I217V, R231K, D232N	B
	W52	W52	FJ554725	None		S17N, S39C, K71Q, L101I, T112I, S119R, T122V, T124N, T125A, T206S, L234V	B
	W54	W54	FJ554727	None		E11D, S24N, V31I, L45I, L101I, T112I, I113L, T122I, T124N, V201I, T206S	B
	W56	W56	FJ554729	None		K14R, V32I, L45I, M50I, V201I, T206S	B
	W57	W57	FJ554730	None		E11D, V31I, M50L, I72V, L101I, I204V, T206S	B
	W64	W64	FJ554737	None		E11D, E13D, L74I, L101I, K111T, I113V, T122I, T124A, V201I, T206S, D232E, D253H, D256E, D279G, Q285P	B
	W70	W70	FJ554743	None		E11D, S24N, V32I, S39C, M50L, L101I, S119G, T124N, I135V, K136N, V201I, A205S, T206S, N254K	B
	W71	W71	FJ554744	None		K14R, R20K, S39C, I113V, K173R, V201I, T206S	B
	W72	W72	FJ554745	None		E11D, A23T, L45Q, K188R, V201I, T206S, D232E, A265V	B
	W97	W97	FJ554770	None		V31I, T206S	B
	W98	W98	FJ554771	None	T97A	V31I, T124A, T206S	B
	W99	W99	FJ554772	None		E11D, I72V, T206S, A265V	B
	W123	W123	FJ554796	None		K7Q, D55G, A91S, T124A, T206S, I208L, K215N, I217V, R231K, D232N	B
Wang (2009)	012286G	012286G	FJ469683	None		A49P, I72V, I113V, T124A, T206S, L234I	B
	CR0023W	CR0023W	FJ469688	None		D3E, D55N, T124N, G163N, V201I, T206S, K211R, K219Q, I220L, I251V	B
	CR0027M	CR0027M	FJ469689	None		L28I, P30A, S39C, L101I, S119T, K188R, V201I, T206S, Y227F, L234V, A265V	B
	CR0050Z	CR0050Z	FJ469692	None		E11D, K14R, S24N, I72V, P90S, S119P, T122I, T125A, V126M, V201I, T206S, D256E	B
	CR0058S	CR0058S	FJ469693	None		E11D, S24N, M50I, I72V, I84V, V201I, T206S, I208L, D256E	B
	CR0215	CR0215	FJ469708	None		D25E, I113V, T125A, T206S, T210I, S230N, R231K	B
	CR0234	CR0234	FJ469711	None		L28I, P30T, S39C, I72V, I84M, L101I, T125A, I200M, V201I, I203M, T206S, I208L	B
	CR0275	CR0275	FJ469713	None		K7R, V31I, L101I, K111T, T206S, D232E	B
	CR0289Z	CR0289Z	FJ469715	None		S17N, A23V, L28I, S39C, I72V, I113V, T124A, E152K, F181L, G190E, V201I, T206S, Q216H	B
	CR0295S	CR0295S	FJ469716	None		E11D, V31I, T206S, S283G	B
	CR0317N	CR0317N	FJ469719	None		G106A, T112V, I113V, T124A, T206S, D207E, I208L, I217S, N254Q, S255G	B
	CR0339X	CR0339X	FJ469721	None		I72V, L101I, I182V, G193E, V201I, T206S, T218S, D286N	B
	F701	F701	FJ469727	None		E11D, M50I, I60V, I113V, S119T, T206S, I208L, D232E, D256E	B
	F710	F710	FJ469729	None		E10D, M50I, I72V, S119P, T124N, T125A, V126L, G163Q, T206S, I208L, L234I, D253E, D256E	B
	F719	F719	FJ469734	None		K14R, S24G, D25E, L28I, S39C, I72V, L101I, T124N, K173R, I182V, T206S	B
	L8124P	L8124P	FJ469741	None		I72V, L101I, T112I, S119P, T122I, T124N, T125A, M154L, D167E, V201I, T206S, I208M, D256E	B
	L8152	L8152	FJ469742	None		E11D, L101I, K111N, S119T, V201I, T206S, D256E, M275V	B
	NCQ	NCQ	FJ469752	None		V31I, L101I, A133T, V201I, T206S, I217V, A265V, R269K, S283G	B
	PRLS02	PRLS02	FJ469754	None		K14R, S24G, D25E, L28I, S39C, I72V, L101I, T124N, K173R, I182V, T206S	B
	PRLS25	PRLS25	FJ469765	None		E11D, M50I, I60V, I113V, S119T, T206S, I208L, T210A, D232E, D256E	B
	SH8127	SH8127	FJ469767	None		I72V, I113V, S119P, T124A, V201I, T206S, K211R, E212L, K215N, S230N, M275V, S283G	B
Wittkop (2009)	5	5_J0	GU358391	None	V151VI	E11D, E13D, V31I, M50I, S57G, S119P, T122I, T124A, T206S, S255N, D256E, S283G	B
	10	10_J0	GU358404	None		E11D, E13D, S57N, L101I, K111T, T122I, T124A, I200M, V201I, T206S, V259I	B
Arruda (2010)	EI003	EI003	GQ864163	None		S17N, L28I, P30A, L45S, I72V, K111R, K160T, V201I, T206S, K211R, M275V	B
	EI006	EI006	GQ864166	None		E10D, L101I, T112V, S119P, V201I, T206S, I208L, N254K	B
	EI010	EI010	GQ864167	None		D25E, S119P, T206S, I208L, A282X, S283N	B
	EI020	EI020	GQ864175	None		D6E, K7R, P30S, V31I, L101I, T206S	B
	EI043	EI043	GQ864188	None		V31I, M50I, I72V, I113V, T124A, F181L, V201I, T206S, D256E, A265V, R284G, D286N	B
	EI051	EI051	GQ864196	None	V151I	E11D, V31I, I72V, T124A, T206S, K215Q, D256E	B
	EI077	EI077	GQ864218	None	V151I	E11D, V31I, I72V, L74I, S119P, T122I, V201I, T206S, K219Q, R224Q, D256E, R269K, S283G	B
	EI082	EI082	GQ864222	None	V151I	E11D, S24N, V31I, K34R, M50I, I89M, A91T, L101I, D167E, V201I, T206S, S283G	B
	EI083	EI083	GQ864223	None		R20K, I72V, T124A, T125A, T206S, T218I, L234I, R269RT	B
	EI084	EI084	GQ864224	None		E11D, K14R, S17T, I72V, T124A, V165I, T206S, L234V, D256E, S283G	B
	EI086	EI086	GQ864226	None		V31I, L45Q, I113V, T124N, T125A, T206S, S230N, A265V	B
Rangel (2010)	N421p	N421p	GU797487	None		S39C, L101I, S119G, T122I, T125A, I135V, V201I, T206S, T218S, K219N, D232E	B
	N477p	N477p	GU797498	None		L28I, P30A, I72V, L101I, T112A, S119T, T125A, M154I, T206S, K215N, N222K	B
	HIV187b	HIV187b	GU797503	None		L172LF, T206S	B
	HIV190b	HIV190b	GU797504	None	V151I	P90PS, I113V, T124N, T125M, V201I, T206S, I208L, D256E	B
	HIV196b	HIV196b	GU797509	None	G163R	V31I, V32I, V37I, S39C, M50I, I72V, T125A, T206S, D232E, D253E	B
	HIV202b	HIV202b	GU797510	None		I72V, I113V, T124N, M154L, V201I, T206S, S230SN, D256E	B
	HIV205b	HIV205b	GU797511	None		V31I, M50I, I141V, V201I, I204IL, T206S, D232E, A265V, S283G	B
	HIV209b	HIV209b	GU797513	None		A23V, L28I, V31I, V32I, V37I, S39C, I72V, S119P, T122I, T125A, L172LF, V201I, T206S, K215N, D256E, S283G, R284K	B
	HIV211b	HIV211b	GU797514	None		I72V, V75M, P90PS, T206S, I208IL, E212EQ, K215N, Q221S, N222K	B
	HIV242p	HIV242p	GU797524	None		L28I, P30A, S39C, I72T, L101I, K111T, K156N, V201I, T206S, I208L, K211R, E212I, Q221T, L234V, N254K	B
	HIV249p	HIV249p	GU797528	None		I72V, A91S, L101I, S119P, M154L, V201I, T206S, T210TI, K211KR, D256E	B
	HIV264b	HIV264b	GU797536	None	E138D	L28I, V31I, S39C, L101I, V201I, T206S, K215N, D229E	B
	HIV264p	HIV264p	GU797537	None	E138D	L28I, V31I, S39C, L101I, V201I, T206S, K215N, D229E	B
	HIV269b	HIV269b	GU797542	None		V31I, S39C, D55G, L101I, T112I, I113L, T124N, T125A, V126A, V201I, T206S, K240R, R284G	B
Blanco (2011)	CA1556	CA124203		None		K7R, S17N, L101I, K111Q, T206S, D256E	B
Brenner (2011)	5971	5971	HQ207729	None		E11D, V32I, S119P, T122I, K136N, S195T, V201I, T206S, V259I, R284G, D286N	B
	7822	7822	HQ207764	None		S17N, R20K, V31I, L45I, M50I, S119P, T124A, T125TA, K156N, V201VI, T206S, K219N, N222K, S230N, D256E	B
	7912	7912	HQ207765	None		Y194C, V201I, T206S, K211R, I268L, D270H	B
	8384	8384	HQ207776	None		Y194C, V201I, T206S, K211R, I268L, D270H	B
	8556	8556	HQ207780	None		E11D, K14R, S24N, G106A, I113V, V201I, T206S, D256E, S283G, R284G	B
	9281	9281	HQ207791	None		E11D, S24SN, V37I, G106A, T112TI, I113V, T124TN, T125A, V201I, T206S, D256E, S283G, R284G	B
	INT2	INT2	HQ207820	None		E10D, S17N, S39SN, G59GE, I72IV, L101I, T112A, T124A, T125A, V165VI, T206S, S283G	B
	INT5	INT5	HQ207826	None		A21T, L45G, T124N, I182V, T206S, I208L, T218I	B
	INT6	INT6	HQ207827	None		S17N, M50I, L101I, T112I, T124N, G163E, A169S, V201I, T206S, I220L, Q221S, D279G	B
Graf (2011)	SC35	SC35	JF773839	None	V151I	D6T, K7A, E10D, M50I, I72V, L101I, S119T, T125A, I135V, T206S, A265V	B
	SC46	SC46	JF773847	None		D6N, K7E, E10A, K14R, E48D, I72V, F100Y, L101I, S119P, T125A, I135V, T206S, K240R, N254K, S255G	B
	SC65	SC65	JF773857	None		K7R, E11D, S17T, K111R, S119P, T124S, T125A, K156N, T206S, K211A, E212Q	B
	SC113	SC113	JF773880	None	V151I	D6T, K7A, S17N, D25E, I72V, F100Y, L101I, S119T, T125A, I135V, V201I, T206S, A265V	B
Kim (2011)	p38	p38	HM051454	None		V31I, I113V, T124N, T125A, K136N, T206S, K215N	B
Rolland (2011)	0227	consensus_0227	JF320036	None		I72V, L74I, T124TA, V201I, T206S, I208L, K211KR, E212A, K215N	B
	0839	consensus_0839	JF320063	None		N27NS, I72V, L101I, T112I, T124A, I135V, V201I, T206S	B
	0346	consensus_0346	JF320083	None		E11D, S24N, V31I, L101I, S119T, I135V, T206S	B
	1211	consensus_1211	JF320144	None		E11D, S17N, L63M, I72V, S123C, T124A, T125A, T206S, S230N	B
	1478	consensus_1478	JF320150	None		E11D, V31I, K111T, I113V, T206S	B
	0648	consensus_0648	JF320186	None		D6E, K14R, P30S, V31I, V77A, L101I, V201I, T206S	B
	2622	consensus_2622	JF320189	None		S17N, I72V, V79A, L101I, T124A, V201I, T206S	B
Sanabani (2011)	BR1064	BR1064	JN692433	None		S17N, S39N, I72V, L74I, T125A, I135V, V201I, I203M, T206S, I208L, T218I, D256E, S283G	B
	BR2032	BR2032	JN692439	None		E11D, E13D, K14R, L28I, T124A, T206S, I208L, S230N, V249I, D256E, S283G	B
	BR2041	BR2041	JN692443	None	V151I	E11D, S17T, V31I, D41A, I72V, L101I, T206S, K215Q, K219R, D256E	B
	BR2019	BR2019	JN692448	None		E11D, K14R, S119P, T122I, T125A, S195T, T206S, V281M	B
	BR1047	BR1047	JN692450	None	V151I	D6S, K7E, I72V, T125A, I135V, F181L, V201I, A205S, T206S, I268L	B
	BR1051	BR1051	JN692452	None		I113V, T124N, T125A, V201I, T206S, I220F	B
	BR1068	BR1068	JN692457	None		D6N, K7E, L28I, P30A, K188R, T206S, L234I	B
	BR1070	BR1070	JN692458	None	V151I	E11D, I72V, L101I, K103R, S119G, T122I, T124A, T125A, T206S, K215Q, T218I, L234V, D256E	B
	BR1079	BR1079	JN692462	None		S17N, L28I, I72V, T124A, M154I, T206S, Y227F, L234H, D256E, R284G	B
	BR1080	BR1080	JN692463	None		E10D, M50I, T124N, T125A, T206S, I208L, R231K, D253E, N254D, S255R, S283G	B
	BR1101	BR1101	JN692473	None		D6N, K7R, S17N, P30S, V31I, T125A, K136Q, V201I, T206S, T218S	B
Brockman (2012)	AEHIV8	AEHIV8	JQ080092	None		V31I, I60M, I72V, V79A, S119P, V201I, T206S, K219N, D288N	B
	AEHIV29	AEHIV29	JQ080113	None		K7R, V31I, L101I, G163E, T206S, D232E	B
	AEHIV32	AEHIV32	JQ080116	None		E11D, S17T, M22I, A23V, V31I, V37I, M50I, L101I, G163E, D167E, V201I, T206S	B
	AEHIV35	AEHIV35	JQ080119	None		T206S, D207E	B
	AEHIV36	AEHIV36	JQ080120	None		T112V, I135V, F181L, V201I, T206S, D256E, I268L, D270H, R284G	B
	AEHIV37	AEHIV37	JQ080121	None		S17N, I72V, T112I, I113V, T124A, T125A, T206S	B
	AEHIV49	AEHIV49	JQ080133	None		E11D, S17C, I72V, L101I, S119P, T122I, T206S	B
	AEHIV50	AEHIV50	JQ080134	None		E11D, A21T, S119P, T124N, V176L, T206S	B
	AEHIV63	AEHIV63	JQ080147	None		E11D, S24N, I72V, T122I, T124N, T206S, I208L	B
	AEHIV88	AEHIV88	JQ080172	None		S39M, I72V, S119P, T122I, K156N, V201I, T206S, K219N, L234I	B
Garrido (2012)	BAA295924	BAA295924	JQ716907	None		R20K, I72V, L101I, I113L, T124N, T125V, I204V, T206S	B
	BAA295937	BAA295937	JQ716912	None	T97A	E11D, S24G, D25E, L45V, M50I, L101I, T125A, F181L, T206S, D256E, S283G, D288N	B
	BAA295944	BAA295944	JQ716916	None		Q44K, I72V, T112TI, I113V, S119P, T122TI, E152G, T206S, T218S	B
Iamarino (2012)	BF.BR.0708	BF.BR.0708	JN234041	None		E11D, L28I, V31I, V32I, V37I, I72V, L101I, T112A, I135V, G193R, V201I, T206S, L234I, A265V, S283G	B
	BF.BR.0639	BF.BR.0639	JN234046	None		S17N, S39C, I72V, S119P, T122I, T125A, V201I, T206S, Q216H, K219N, D278N	B
	BF.BR.0658	BF.BR.0658	JN234047	None		T206S, K215N, Q216N, D256E	B
	BF.BR.0709	BF.BR.0709	JN234050	None	E138D	S17N, K34R, M50L, I72V, L101I, K111Q, S119G, T124N, T206S, D207E, Y227F, D232E, D253Y, D256E, A265V, V281A, R284T, Q285P	B
	BF.BR.1027	BF.BR.1027	JN234054	None		S17N, A21S, A23V, D25E, V31I, E69K, G70E, I113V, T124A, T125A, M154I, E157K, D167E, T206S, D253E	B
	BF.BR.1038	BF.BR.1038	JN234056	None	V151I	S17N, A21S, A23V, V31I, L101I, T112I, M154I, V201I, T206S	B
	BF.BR.1074	BF.BR.1074	JN234059	None		D6S, K7E, K14R, V32I, S39C, I72V, H183Y, T206S, L234I	B
	BF.BR.1415	BF.BR.1415	JN234061	None		D6N, K7E, Q9P, V31I, L45P, I72V, I113V, T125A, T206S, T218S, L234I	B
	BF.BR.1438	BF.BR.1438	JN234063	None	V151I	D6T, K7E, V31I, I36L, I72V, L101I, I113V, S119T, V201I, T206S, I208L, T218I, L234I	B
	B.BR.0475	B.BR.0475	JN234084	None		E11D, S24A, T125A, I135V, F181L, V201I, T206S, I220F	B
	B.BR.0484	B.BR.0484	JN234086	None		D6S, K7E, R20K, L28I, P30A, I72V, V201I, T206S, L234I	B
	B.BR.0514	B.BR.0514	JN234092	None		A21S, V31I, K34R, I72V, L101I, T206S, A265V, S283G	B
	B.BR.0523	B.BR.0523	JN234094	None		L101I, K156N, V201I, T206S, E212V, K219T, I220L, A265V	B
	B.BR.0535	B.BR.0535	JN234095	None	V151I	V31I, T125A, V126L, K127R, T206S	B
	B.BR.0633	B.BR.0633	JN234099	None	V151I	I72V, I113V, S119T, T124N, T125A, T206S, K211R, E212I, T218I, L234I, D256E	B
	B.BR.1006	B.BR.1006	JN234112	None		D6T, K7E, K14R, V31I, V32I, I72V, T206S, T218I, L234I, D256E	B
	B.BR.1046	B.BR.1046	JN234122	None		D6N, K7E, E11D, S24N, M50I, T124A, T206S, I217V, T218S, K219Q, I220L, N222K, L234I, S283N	B
	B.BR.1059	B.BR.1059	JN234123	None		D6S, K7E, E13D, S119P, T122I, T125A, K156N, T206S, L234I, D278N, S283G	B
	B.BR.1361	B.BR.1361	JN234140	None		D6N, K7E, V31I, I72V, K156N, T206S, N222H, L234I, D279G	B
	B.BR.1388	B.BR.1388	JN234145	None		S39C, M50I, L101I, T206S, I208L, A265V, R269K	B
	B.BR.1416	B.BR.1416	JN234146	None		D6N, K7E, E11D, L28I, V31I, V32I, G59R, I72V, V176E, T206S, L234I, A265V	B
	B.BR.1481	B.BR.1481	JN234151	None		D6S, K7E, K14R, V32I, V201I, T206S, L234I	B
	B.BR.1497	B.BR.1497	JN234156	None	V151I	E11D, I72V, V88I, I113V, S119P, S195T, T206S, D207E, L234I, D256E	B
	B.BR.1500	B.BR.1500	JN234158	None		D6T, E10D, E13D, V32I, I72V, I113V, T124N, T125A, I204V, T206S, I208L	B
	B.BR.1540	B.BR.1540	JN234168	None		D6S, K7E, D25E, S119P, T122I, T125A, K156N, T206S, L234I, D278N	B
	B.BR.1542	B.BR.1542	JN234169	None		D6T, K7Q, E11D, K14R, S17N, L28I, L45V, T124N, T125A, I135V, G163E, T206S, S230N, N254Q, S255G, K273N	B
	B.BR.0452	B.BR.0452	JN234170	None		A21S, A23V, S24G, L101I, T206S	B
	B.BR.1044	B.BR.1044	JN234176	None		G4E, S17N, A21S, A23V, D25E, V31I, L101I, I113V, T124A, T125A, D167E, T206S, D253E	B
Kijak (2012)	05TH357801	05TH357801	JN248346	None		S17N, L101I, T124A, T125A, I135V, K136N, I162V, T206S, D256E, D279G, R284G	B
Parczewski (2012)	103	103_38	KC409134	None		E11D, R20K, G70D, L101I, S119R, T124N, G193E, S195T, T206S, D270N	B
	110_45	110_45	KC409142	None		E11D, S57SN, I60IM, G70E, L101I, S119R, T124N, G193E, S195T, T206S, D279G	B
	409_6	409_6	KC409159	None		E11D, S24N, D25DE, V31I, I60L, G70N, L101I, T112TI, I113V, T124N, T206S, K211R, A265V	B
	514_15	514_15	KC409167	None		P30A, I72V, K160KN, V201I, T206S	B
	919_1	919_1	KC409215	None		K14R, G70E, L101I, T112V, S119R, T124N, K160Q, R187K, V201I, T206S, S230N, D256E, S283G	B
Li (2013)	2838	2838	JQ901049	None		S17N, I72V, P90S, L101I, T124A, K156N, D167E, V201I, T206S, D256E	B

Integrase Inhibitors

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