<!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

Isolate Data

Patient Isolate Region Year Species Subtype Source Clone Method
Pt123 110581 Portugal 2005 HIV1 G Plasma None

Treatment History
Order Regimen Weeks
1 None NA

RT Sequence
NRTIMajorDRMs NRTIMinorDRMs NNRTIMajorDRMs NNRTIMinorDRMs Polys UnusualMuts
        V35T, T39TI, E40ED, K43R, K49KR, V60I, A98S, K122E, D123S, I135T, K173I, Q174K, D177DEG, T200A, I202IV, Q207K, R211RKNS, V245Q, E248D, D250E, A272P, T286A, E291ED, V292I, I293V, E297A, L301LM, D320E, D324E, I329V, G333E, Q334LP  
>110581| codons 1-335
PISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALTEICIDMEREGKISRIGPENPYNTPI
FAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPSGLKKKKSVTVLDVGDAYFSVPL
DESFRKYTAFTIPSTNNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRIKNPGIVI
YQYMDDLYVGSDLEIGQHRAKVEELRKHLLSWGFTTPDKKHQKEPPFLWMGYELHPDKWT
VQPIQLPDKESWTVNDIQKLVGKLNWASQIYPGIKVKQLCKLLRGAKALTDIVPLTAEAE
MELAENREILKEPVHGVYYEPSKELIAEVQKQEPG

Protease Sequence
PIMajorDRMs PIMinorDRMs Polys UnusualMuts
    I13V, L19I, K20I, E35D, M36I, R41RK, H69KQ, V82I, L89M  
>110581| codons 1-99
PQITLWQRPLVTVKIGGQIIEALLDTGADDTVLEDINLPGKWKPKMIGGIGGFIKVRQYD
QILIEICGQKAIGTVLVGPTPINIIGRNMLTQIGCTLNF

References
Author Title Citation
Palma, AC Molecular epidemiology and prevalence of drug resistance-associated mutations in newly diagnosed HIV-1 patients in Portugal. Infect Genet Evol, 2007