Isolate Data
Patient | Isolate | Region | Year | Species | Subtype | Source | Clone Method |
CA1449 | CA9793 | U.S. | 1999 | HIV1 | B | Plasma | None |
Treatment History
Order | Regimen | Weeks |
1 | Unknown | 55 |
2 | ABC+ADV+EFV | 23 |
3 | ADV+EFV+NFV | 21 |
4 | EFV+IDV+NFV | 4 |
Protease Sequence
PIMajorDRMs | PIMinorDRMs | Polys | UnusualMuts |
D30N | N88D | I15V, E35D, M36V, N37E, I62V, L63P |
>CA9793| codons 1-99 PQITLWQRPLVTIKVGGQLKEALLDTGADNTVLEDVELPGRWKPKMIGGIGGFIKVRQYD QVPIEICGHKAIGTVLVGPTPVNIIGRDLLTQIGCTLNF |
RT Sequence
NRTIMajorDRMs | NRTIMinorDRMs | NNRTIMajorDRMs | NNRTIMinorDRMs | Polys | UnusualMuts |
M41L, L74V, L210W, T215Y | V75I | L100I, K103N | K20R, I31L, V35E, T39A, K122E, R211K, A272P, T286A, I293V, T296S, E297A |
>CA9378| codons 1-303 PISPIETVPVKLKPGMDGPRVKQWPLTEEKLKALEEICAELEKEGKISKIGPENPYNTPV FAIKKKDSTKWRKVIDFRELNKRTQDFWEVQLGIPHPAGIKKNKSVTVLDVGDAYFSVPL DEDFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRKQNPDIVI YQYMDDLYVGSDLEIGQHRTKIEELRQHLWKWGFYTPDKKHQKEPPFLWMGYELHPDKWT VQPIVLPEKDSWTVNDIQKLVGKLNWASQIYPGIKVKQLCKLLRGAKALTEVVPLSAEAE LEL |
References
Author | Title | Citation |
Shulman, NS | Efavirenz- and adefovir dipivoxil-based salvage therapy in highly treatment-experienced patients: Clinical and genotypic predictors of virologic response. | JAIDS, 2000 |
Rhee, SY | HIV-1 protease and reverse transcriptase mutations: Correlations with antiretroviral therapy in subtype B isolates and implications for drug-resistance surveillance. | J Infect Dis, 2005 |