Isolate Data
| Patient | Isolate | Region | Year | Species | Subtype | Source | Clone Method |
| 0908MO | 01CM.0908 | Cameroon | 2001 | HIV1 | F | PBMC | None |
Treatment History
| Order | Regimen | Weeks |
| 1 | None | NA |
Protease Sequence
| PIMajorDRMs | PIMinorDRMs | Polys | UnusualMuts |
| I13V, E35D, M36I, L63P, H69Q |
| >01CM.0908| codons 1-99 PQITLWQRPLVTVKIGGQLKEALLDTGADDTVLEDINLPGRWKPKMIGGIGGFIKVRQYD QIPIEICGQKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF |
RT Sequence
| NRTIMajorDRMs | NRTIMinorDRMs | NNRTIMajorDRMs | NNRTIMinorDRMs | Polys | UnusualMuts |
| K20R, V35T, E36D, K49R, V60I, K103R, D123E, K173I, Q174K, D177E, Q207E, P243A, V245Q, E248D, A272P, K277R, Q278H, T286A, E291D, I293V, E297A, L303M, I329V, Q334H, G335D, F346H, R356K, M357R, G359T, K366R, A371V, A376S, T386I, K390R, A400T, K431T, V435A, D471E, H483Y, L491S, Q509H, S519N, Q524H, K527Q, A534S, A554S |
| >01CM.0908| codons 1-560 PISPIETVPVKLKPGMDGPRVKQWPLTEEKIKALTDICTEMEKEGKISRIGPENPYNTPI FAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKRKSVTVLDVGDAYFSVPL DKEFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRIKNPEIVI YQYMDDLYVGSDLEIGQHRTKIEELREHLLRWGFTTPDKKHQKEPPFLWMGYELHPDKWT VQAIQLPDKDSWTVNDIQKLVGKLNWASQIYPGIKVRHLCKLLRGAKALTDVVPLTAEAE LEMAENREILKEPVHGVYYDPSKDLIAEVQKQGHDQWTYQIYQEPHKNLKTGKYAKRRTA HTNDVRQLTEVVQKISTESIVIWGKIPKFRLPIQKETWETWWTEYWQATWIPEWEFVNTP PLVKLWYQLETEPIAGAETFYVDGAANRETKLGKAGYVTDRGRQKVVSLTETTNQKTELQ AIYLALQDSGSEVNIVTDSQYALGIIQAHPDKSESELVNQIIEHLIQKEKVYLSWVPAHK GIGGNEQVDKLVSSGIRKVL |
Integrase Sequence
| INIMajorDRMs | INIMinorDRMs | Polys | UnusualMuts |
| K14R, V31I, I72V, G82S, T112V, I113V, T124A, T125A, K156N, E157Q, V201I, L234I, D256E | V281M, S283G |
| >01CM.0908| codons 1-288 FLDGIDKAQEEHERYHSNWRAMASDFNLPPIVAKEIVASCDKCQLKGEAMHGQVDCSPGI WQLDCTHLEGKVILVAVHVASSYIEAEVIPAETGQETAYFLLKLAGRWPVKVVHTDNGSN FTSAAVKAACWWAGIKQEFGIPYNPQSQGVVESMNNQLKKIIGQVRDQAEHLKTAVQMAV FIHNFKRKGGIGGYSAGERIIDIIATDIQTKELQKQITKIQNFRVYYRDSRDPIWKGPAK LLWKGEGAVVIQDNSEIKVVPRRKAKIIRDYGKQMAGDDCMAGRQDED |
References
| Author | Title | Citation |
| Kijak, GH | Development and application of a high-throughput HIV type 1 genotyping assay to identify CRF02_AG in West/West Central Africa. | ARHR, 2004 |