Isolate Data
| Patient | Isolate | Region | Year | Species | Subtype | Source | Clone Method |
| 1152NG | 01CM.1152 | Cameroon | 2001 | HIV1 | A | PBMC | None |
Treatment History
| Order | Regimen | Weeks |
| 1 | None | NA |
Protease Sequence
| PIMajorDRMs | PIMinorDRMs | Polys | UnusualMuts |
| L10V, I13V, E35D, M36L, R41K, H69K, L89M |
| >01CM.1152| codons 1-99 PQITLWQRPVVTVKIGGQLKEALLDTGADDTVLEDLNLPGKWKPKMIGGIGGFIKVRQYD QILIEICGKKAIGTVLVGPTPVNIIGRNMLTQIGCTLNF |
RT Sequence
| NRTIMajorDRMs | NRTIMinorDRMs | NNRTIMajorDRMs | NNRTIMinorDRMs | Polys | UnusualMuts |
| K11A, V35T, T39K, D121Y, K122E, K173S, Q174K, D177E, Q207A, R211S, V245Q, T286A, E291D, I293V, E312D, G335D, M357K, G359S, K366R, E370D, I375V, T377L, T403M, E413D, E432D, V435M, V458I, D471E, T477A, Q480H, H483Q, Q487R, L491S, A502S, K512R, E514D, S519N, Q524K, K527E, A534S, V548I, A554S |
| >01CM.1152| codons 1-560 PISPIETVPVALKPGMDGPKVKQWPLTEEKIKALTEICKEMEKEGKISKIGPENPYNTPV FAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPL YEDFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRSKNPEIVI YQYMDDLYVGSDLEIGQHRTKIEELRAHLLSWGFTTPDKKHQKEPPFLWMGYELHPDKWT VQPIQLPEKDSWTVNDIQKLVGKLNWASQIYAGIKVKQLCKLLRGAKALTDVVPLTEEAE LELAENREILKDPVHGVYYDPSKDLIAEIQKQGQDQWTYQIYQEPFKNLKTGKYARKRSA HTNDVRQLTDAVQKVALESIVIWGKTPKFKLPIQKETWEAWWMEYWQATWIPDWEFVNTP PLVKLWYQLEKDPIMGAETFYVDGAANRETKLGKAGYITDRGRQKVVSLTETTNQKAELH AIQLALRDSGSEVNIVTDSQYSLGIIQAQPDRSDSELVNQIIEKLIEKEKVYLSWVPAHK GIGGNEQIDKLVSSGIRKVL |
Integrase Sequence
| INIMajorDRMs | INIMinorDRMs | Polys | UnusualMuts |
| E11D, K14R, A21T, A23V, S24N, D25E, V31I, M50I, I72V, L101I, T112V, T124A, T125A, G134N, K136Q, V165I, D167E, V201I, T206S, D207E, T218I, I220V, L234I | S283G |
| >01CM.1152| codons 1-288 FLDGIDKAQEDHERYHSNWRTMVNEFNLPPIVAKEIVASCDKCQLKGEAIHGQVDCSPGI WQLDCTHLEGKVILVAVHVASGYIEAEVIPAETGQETAYFILKLAGRWPVKVIHTDNGSN FTSAAVKAACWWANIQQEFGIPYNPQSQGVVESMNKELKKIIGQIREQAEHLKTAVQMAV FIHNFKRKGGIGGYSAGERIIDIIASEIQTKELQKQIIKVQNFRVYYRDSRDPIWKGPAK LLWKGEGAVVIQDNSDIKVVPRRKAKIIRDYGKQMAGDDCVAGRQDED |
References
| Author | Title | Citation |
| Kijak, GH | Development and application of a high-throughput HIV type 1 genotyping assay to identify CRF02_AG in West/West Central Africa. | ARHR, 2004 |