Isolate Data
| Patient | Isolate | Region | Year | Species | Subtype | Source | Clone Method |
| 1710LE | 02CM.1710 | Cameroon | 2002 | HIV1 | A | PBMC | None |
Treatment History
| Order | Regimen | Weeks |
| 1 | None | NA |
Integrase Sequence
| INIMajorDRMs | INIMinorDRMs | Polys | UnusualMuts |
| E11D, A21T, V31I, I72V, L101I, T112V, T124A, T125A, G134N, D167E, V201I, T218I, L234I, K236R, D256E, R262K | S283G |
| >02CM.1710| codons 1-288 FLDGIDKAQEDHEKYHSNWRTMASDFNLPPIVAKEIVASCDKCQLKGEAMHGQVDCSPGI WQLDCTHLEGKVILVAVHVASGYIEAEVIPAETGQETAYFILKLAGRWPVKVIHTDNGSN FTSAAVKAACWWANIKQEFGIPYNPQSQGVVESMNKELKKIIGQVREQAEHLKTAVQMAV FIHNFKRKGGIGGYSAGERIIDIIATDIQTKELQKQIIKIQNFRVYYRDSRDPIWRGPAK LLWKGEGAVVIQDNSEIKVVPKRKAKIIRDYGKQMAGDDCVAGRQDED |
RT Sequence
| NRTIMajorDRMs | NRTIMinorDRMs | NNRTIMajorDRMs | NNRTIMinorDRMs | Polys | UnusualMuts |
| D17N, V35T, E36D, T39L, E42K, W71*, K122E, D123N, K166R, E169K, F171Y, R172K, K173T, Q174K, D177E, T200E, E204D, V245K, E248D, D250E, A272P, K275Q, T286A, E291D, V292I, I293V, E297A, I329V, Q334L, G335D, R356K, M357R, G359T, K366R, T369A, A371V, T377L, K390R, K395R, E396D, A400T, E404D, V435I, E449D, L452I, R461K, S468T, D471E, Q480E, E529D, A534S, A554S | M41I |
| >02CM.1710| codons 1-560 PISPIETVPVKLKPGMNGPKVKQWPLTEEKIKALTDICLEIKKEGKISKIGPENPYNTPV FAIKKKDSTK*RKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPL DENFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQSSMTRILKPYKTKNPEIVI YQYMDDLYVGSDLEIGQHREKIEDLRQHLLRWGFTTPDKKHQKEPPFLWMGYELHPDKWT VQPIKLPDKESWTVNDIQKLVGKLNWASQIYPGIQVKQLCKLLRGAKALTDIVPLTAEAE LELAENREILKEPVHGVYYDPSKDLIAEVQKQGLDQWTYQIYQEPFKNLKTGKYAKRRTA HTNDVRQLAEVVQKIALESIVIWGKTPKFRLPIQRDTWETWWTDYWQATWIPEWEFVNTP PLVKLWYQLEKEPIIGAETFYVDGAANRDTKIGKAGYVTDKGRQKVVTLTETTNQKTELE AIHLALQDSGLEVNIVTDSQYALGIIQAQPDKSESELVSQIIEQLIKKDKVYLSWVPAHK GIGGNEQVDKLVSSGIRKVL |
References
| Author | Title | Citation |
| Kijak, GH | Development and application of a high-throughput HIV type 1 genotyping assay to identify CRF02_AG in West/West Central Africa. | ARHR, 2004 |