Isolate Data
| Patient | Isolate | Region | Year | Species | Subtype | Source | Clone Method |
| KL007 | 05_007.1 | Malaysia | 2005 | HIV1 | CRF01_AE | PBMC | None |
Treatment History
| Order | Regimen | Weeks |
| 1 | None | NA |
Integrase Sequence
| INIMajorDRMs | INIMinorDRMs | Polys | UnusualMuts |
| K14R, A21T, V31I, V37A, S39N, L63V, I72V, T112V, T124A, T125A, G134N, I135V, K136Q, D167E, V201I, I208L, L234I, D279G | Q62R, T97I |
| >05_007.1| codons 1-288 FLDGIDKAQEEHERYHSNWRTMASDFNLPPIVAKEIAANCDKCQLKGEAMHGQVDCSPGI WRVDCTHLEGKVILVAVHVASGYIEAEVIPAETGQEIAYFLLKLAGRWPVKVIHTDNGSN FTSAAVKAACWWANVQQEFGIPYNPQSQGVVESMNKELKKIIGQVREQAEHLKTAVQMAV FIHNFKRKGGIGGYSAGERIIDIIATDLQTKELQKQITKIQNFRVYYRDSRDPIWKGPAK LLWKGEGAVVIQDNSDIKVVPRRKAKIIRDYGKQMAGDGCVASRQDED |
Protease Sequence
| PIMajorDRMs | PIMinorDRMs | Polys | UnusualMuts |
| E35D, M36I, H69K, K70R, L89M |
| >05_007.1| codons 1-99 PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEDINLPGRWKPKMIGGIGGFIKVRQYD QILIEICGKRAIGTVLVGPTPVNIIGRNMLTQIGCTLNF |
RT Sequence
| NRTIMajorDRMs | NRTIMinorDRMs | NNRTIMajorDRMs | NNRTIMinorDRMs | Polys | UnusualMuts |
| V35I, S68G, K122E, K173I, Q174K, D177E, I178M, T200I, Q207A, R211N, K238R, V245E, R284K, T286A, E291D, V292I, I293V, E312T, I326V, I329V, G335D, M357R, G359S, K366R, A371V, K390R, K395R, W398R, A400T, T403M, E432D, V435I, N447S, R461K, D471E, Q480H, L491S, K512R, L517V, S519N, Q524E, A534S, Q547K, A554S |
| >05_007.1| codons 1-560 PISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALIEICTEMEKEGKISKIGPENPYNTPV FAIKKKDGTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPL DEDFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRIKNPEMVI YQYMDDLYVGSDLEIGQHRIKIEELRAHLLNWGFTTPDKKHQKEPPFLWMGYELHPDRWT VQPIELPEKDSWTVNDIQKLVGKLNWASQIYAGIKVKQLCKLLKGAKALTDIVPLTEEAE LELAENREILKTPVHGVYYDPSKDLVAEVQKQGQDQWTYQIYQEPFKNLKTGKYARRRSA HTNDVRQLTEVVQKIATESIVIWGKTPKFRLPIQRETRETWWMEYWQATWIPEWEFVNTP PLVKLWYQLEKDPIIGAETFYVDGAASRETKLGKAGYVTDKGRQKVVSLTETTNQKTELH AIHLALQDSGSEVNIVTDSQYALGIIQAQPDRSESEVVNQIIEELIKKEKVYLSWVPAHK GIGGNEKVDKLVSSGIRKVL |
References
| Author | Title | Citation |
| Tee, KK | Identification of a novel circulating recombinant form (CRF33_01B) disseminating widely among various risk populations in Kuala Lumpur, Malaysia. | JAIDS, 2006 |