Isolate Data
| Patient | Isolate | Region | Year | Species | Subtype | Source | Clone Method |
| TZBFL0088 | TZBFL0088 | Tanzania | 1996 | HIV1 | D | PBMC | MC |
Treatment History
| Order | Regimen | Weeks |
| 1 | None | NA |
Protease Sequence
| PIMajorDRMs | PIMinorDRMs | Polys | UnusualMuts |
| I13V, K14R, M36I, P39A, R41K, I64V, V77I |
| >TZBFL0088| codons 1-99 PQITLWQRPLVTVRIGGQLKEALLDTGADDTVLEEINLAGKWKPKMIGGIGGFIKVRQYD QILVEICGHKAIGTVLIGPTPVNIIGRNLLTQIGCTLNF |
RT Sequence
| NRTIMajorDRMs | NRTIMinorDRMs | NNRTIMajorDRMs | NNRTIMinorDRMs | Polys | UnusualMuts |
| E28K, K32E, V35I, K49R, V60I, D121Y, K122E, I135T, I142L, E169D, D177E, I178L, T200I, Q207E, R211K, F214L, P243T, V245E, D250E, A272P, I274X, K275Q, L282C, L283I, T286A, I293V, I326V, G335D, P345Q, F346Y, A355T, R356K, M357V, A360T, T377Q, E378G, K390R, K395*, A400T, E404D, H483N, L517I, S519N, A534S, A554N, V559I |
| >TZBFL0088| codons 1-560 PISPIETVPVKLKPGMDGPKVKQWPLTKEKIEALIEICTEMEKEGKISRIGPENPYNTPI FAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPL YEDFRKYTAFTIPSTNNETPGLRYQYNVLPQGWKGSPAIFQSSMTKILDPFRKQNPELVI YQYMDDLYVGSDLEIGQHRIKIEELREHLLKWGLTTPDKKHQKEPPFLWMGYELHPDKWT VQTIELPEKESWTVNDIQKLVGKLNWASQIYPGXQVKQLCKCIRGAKALTEVVPLTEEAE LELAENREILKEPVHGVYYDPSKDLVAEIQKQGQDQWTYQIYQEQYKNLKTGKYTKVRGT HTNDVKQLTEAVQKIAQGSIVIWGKTPKFRLPIQ*ETWETWWTDYWQATWIPEWEFVNTP PLVKLWYQLEKEPIVGAETFYVDGAANRETKLGKAGYVTDRGRQKVVSLTDTTNQKTELQ AINLALQDSGLEVNIVTDSQYALGIIQAQPDKSESEIVNQIIEQLIKKEKVYLSWVPAHK GIGGNEQVDKLVSNGIRKIL |
References
| Author | Title | Citation |
| Koulinska, IN | Common genetic arrangements among human immunodeficiency virus type 1 subtype A and D recombinant genomes vertically transmitted in Tanzania. | ARHR, 2002 |