Isolate Data
| Patient | Isolate | Region | Year | Species | Subtype | Source | Clone Method |
| 04BR013 | 04BR013 | Brazil | 2004 | HIV1 | C | PBMC | None |
Treatment History
| Order | Regimen | Weeks |
| 1 | PI + RTI | NA |
Protease Sequence
| PIMajorDRMs | PIMinorDRMs | Polys | UnusualMuts |
| M46I, G48V, V82A | L24I | L10I, K20R, M36I, N37E, R41K, K55R, I62V, L63P, H69K, T74A, L89M, I93L |
| >04BR013| codons 1-99 PQITLWQRPIVTIKIGGQLREALIDTGADDTVLEEIELPGKWKPKIIVGIGGFIRVRQYD QVPIEICGKKAIGAVLVGPTPANIIGRNMLTQLGCTLNF |
RT Sequence
| NRTIMajorDRMs | NRTIMinorDRMs | NNRTIMajorDRMs | NNRTIMinorDRMs | Polys | UnusualMuts |
| D67N, K70R | T215I, K219Q | V35T, T39D, V60I, T69N, K103Q, K122E, D123S, I135K, K173A, Q174K, D177E, T200A, Q207E, R211K, V245Q, A272P, K277R, E291D, V292I, I293V, Q334E, G335D, R356K, G359T, K366R, T377Q, K390R, E404D, V435P, D460N, V466I, D471E, H483K, L491S, S519N, K530R, A534S, Q547K, A554S |
| >04BR013| codons 1-560 PISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALTEICDEMEKEGKISKIGPENPYNTPI FAIKKKNSNRWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKQKSVTVLDVGDAYFSVPL DESFRKYTAFTIPSKNNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRAKNPEIVI YQYMDDLYVGSDLEIGQHRAKIEELREHLLKWGFITPDQKHQKEPPFLWMGYELHPDKWT VQPIQLPEKDSWTVNDIQKLVGKLNWASQIYPGIKVRQLCKLLRGTKALTDIVPLTEEAE LELAENREILKEPVHGVYYDPSKDLIAEIQKQGEDQWTYQIYQEPFKNLKTGKYAKMRTA HTNDVRQLTEAVQKIAQESIVIWGKTPKFRLPIQKETWEAWWTDYWQATWIPEWEFVNTP PLVKLWYQLEKEPIPGAETFYVDGAANRETKLGKAGYVTNRGRQKIVSLTETTNQKTELQ AIKLALQDSGSEVNIVTDSQYALGIIQAQPDKSESELVNQIIEQLIKKERVYLSWVPAHK GIGGNEKVDKLVSSGIRKVL |
Integrase Sequence
| INIMajorDRMs | INIMinorDRMs | Polys | UnusualMuts |
| D25E, V31I, L101I, T112V, T124N, K136Q, V201I, T218I, L234I, I251L, A265V, R269K, D278A | D286N |
| >04BR013| codons 1-288 FLDGIDKAQEEHEKYHSNWRAMASEFNLPPIVAKEIVASCDKCQLKGEAMHGQVDCSPGI WQLDCTHLEGKIILVAVHVASGYIEAEVIPAETGQETAYFILKLAGRWPVKVIHTDNGSN FTSNTVKAACWWAGIQQEFGIPYNPQSQGVVESMNKELKKIIGQVRDQAEHLKTAVQMAV FIHNFKRKGGIGGYSAGERIIDIIATDIQTKELQKQIIKIQNFRVYYRDSRDPIWKGPAK LLWKGEGAVVLQDNSDIKVVPRRKVKIIKDYGKQMAGADCVASRQNED |
References
| Author | Title | Citation |
| Sanabani, S | Full-length genome analysis of human immunodeficiency virus type 1 subtype C in Brazil. | ARHR, 2006 |